data_3FMB # _entry.id 3FMB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3FMB pdb_00003fmb 10.2210/pdb3fmb/pdb RCSB RCSB050765 ? ? WWPDB D_1000050765 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 391626 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3FMB _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-12-19 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Crystal structure of dimeric protein of unknown function and ferredoxin-like fold (YP_212648.1) from Bacteroides fragilis NCTC 9343 at 1.85 A resolution ; _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3FMB _cell.length_a 72.310 _cell.length_b 72.310 _cell.length_c 233.020 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 24 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3FMB _symmetry.Int_Tables_number 178 _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Dimeric protein of unknown function and ferredoxin-like fold' 13796.136 2 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 5 ? ? ? ? 4 water nat water 18.015 294 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)GSDKIHHHHHHENLYFQG(MSE)VKHIVLFKLRDDVPVEEKLVV(MSE)NSFKEAIEALPAKISVIRKIEVGLN (MSE)NPGETWNIALYSEFDNLDDVKFYATHPEHVAAGKILAETKESRACVDYEF ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSDKIHHHHHHENLYFQGMVKHIVLFKLRDDVPVEEKLVVMNSFKEAIEALPAKISVIRKIEVGLNMNPGETWNIALYS EFDNLDDVKFYATHPEHVAAGKILAETKESRACVDYEF ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier 391626 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 SER n 1 4 ASP n 1 5 LYS n 1 6 ILE n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 HIS n 1 12 HIS n 1 13 GLU n 1 14 ASN n 1 15 LEU n 1 16 TYR n 1 17 PHE n 1 18 GLN n 1 19 GLY n 1 20 MSE n 1 21 VAL n 1 22 LYS n 1 23 HIS n 1 24 ILE n 1 25 VAL n 1 26 LEU n 1 27 PHE n 1 28 LYS n 1 29 LEU n 1 30 ARG n 1 31 ASP n 1 32 ASP n 1 33 VAL n 1 34 PRO n 1 35 VAL n 1 36 GLU n 1 37 GLU n 1 38 LYS n 1 39 LEU n 1 40 VAL n 1 41 VAL n 1 42 MSE n 1 43 ASN n 1 44 SER n 1 45 PHE n 1 46 LYS n 1 47 GLU n 1 48 ALA n 1 49 ILE n 1 50 GLU n 1 51 ALA n 1 52 LEU n 1 53 PRO n 1 54 ALA n 1 55 LYS n 1 56 ILE n 1 57 SER n 1 58 VAL n 1 59 ILE n 1 60 ARG n 1 61 LYS n 1 62 ILE n 1 63 GLU n 1 64 VAL n 1 65 GLY n 1 66 LEU n 1 67 ASN n 1 68 MSE n 1 69 ASN n 1 70 PRO n 1 71 GLY n 1 72 GLU n 1 73 THR n 1 74 TRP n 1 75 ASN n 1 76 ILE n 1 77 ALA n 1 78 LEU n 1 79 TYR n 1 80 SER n 1 81 GLU n 1 82 PHE n 1 83 ASP n 1 84 ASN n 1 85 LEU n 1 86 ASP n 1 87 ASP n 1 88 VAL n 1 89 LYS n 1 90 PHE n 1 91 TYR n 1 92 ALA n 1 93 THR n 1 94 HIS n 1 95 PRO n 1 96 GLU n 1 97 HIS n 1 98 VAL n 1 99 ALA n 1 100 ALA n 1 101 GLY n 1 102 LYS n 1 103 ILE n 1 104 LEU n 1 105 ALA n 1 106 GLU n 1 107 THR n 1 108 LYS n 1 109 GLU n 1 110 SER n 1 111 ARG n 1 112 ALA n 1 113 CYS n 1 114 VAL n 1 115 ASP n 1 116 TYR n 1 117 GLU n 1 118 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BF3034, YP_212648.1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'NCTC 9343' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacteroides fragilis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 272559 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 25285 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q5LAZ3_BACFN _struct_ref.pdbx_db_accession Q5LAZ3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MVKHIVLFKLRDDVPVEEKLVVMNSFKEAIEALPAKISVIRKIEVGLNMNPGETWNIALYSEFDNLDDVKFYATHPEHVA AGKILAETKESRACVDYEF ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3FMB A 20 ? 118 ? Q5LAZ3 1 ? 99 ? 1 99 2 1 3FMB B 20 ? 118 ? Q5LAZ3 1 ? 99 ? 1 99 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3FMB MSE A 1 ? UNP Q5LAZ3 ? ? 'expression tag' -18 1 1 3FMB GLY A 2 ? UNP Q5LAZ3 ? ? 'expression tag' -17 2 1 3FMB SER A 3 ? UNP Q5LAZ3 ? ? 'expression tag' -16 3 1 3FMB ASP A 4 ? UNP Q5LAZ3 ? ? 'expression tag' -15 4 1 3FMB LYS A 5 ? UNP Q5LAZ3 ? ? 'expression tag' -14 5 1 3FMB ILE A 6 ? UNP Q5LAZ3 ? ? 'expression tag' -13 6 1 3FMB HIS A 7 ? UNP Q5LAZ3 ? ? 'expression tag' -12 7 1 3FMB HIS A 8 ? UNP Q5LAZ3 ? ? 'expression tag' -11 8 1 3FMB HIS A 9 ? UNP Q5LAZ3 ? ? 'expression tag' -10 9 1 3FMB HIS A 10 ? UNP Q5LAZ3 ? ? 'expression tag' -9 10 1 3FMB HIS A 11 ? UNP Q5LAZ3 ? ? 'expression tag' -8 11 1 3FMB HIS A 12 ? UNP Q5LAZ3 ? ? 'expression tag' -7 12 1 3FMB GLU A 13 ? UNP Q5LAZ3 ? ? 'expression tag' -6 13 1 3FMB ASN A 14 ? UNP Q5LAZ3 ? ? 'expression tag' -5 14 1 3FMB LEU A 15 ? UNP Q5LAZ3 ? ? 'expression tag' -4 15 1 3FMB TYR A 16 ? UNP Q5LAZ3 ? ? 'expression tag' -3 16 1 3FMB PHE A 17 ? UNP Q5LAZ3 ? ? 'expression tag' -2 17 1 3FMB GLN A 18 ? UNP Q5LAZ3 ? ? 'expression tag' -1 18 1 3FMB GLY A 19 ? UNP Q5LAZ3 ? ? 'expression tag' 0 19 2 3FMB MSE B 1 ? UNP Q5LAZ3 ? ? 'expression tag' -18 20 2 3FMB GLY B 2 ? UNP Q5LAZ3 ? ? 'expression tag' -17 21 2 3FMB SER B 3 ? UNP Q5LAZ3 ? ? 'expression tag' -16 22 2 3FMB ASP B 4 ? UNP Q5LAZ3 ? ? 'expression tag' -15 23 2 3FMB LYS B 5 ? UNP Q5LAZ3 ? ? 'expression tag' -14 24 2 3FMB ILE B 6 ? UNP Q5LAZ3 ? ? 'expression tag' -13 25 2 3FMB HIS B 7 ? UNP Q5LAZ3 ? ? 'expression tag' -12 26 2 3FMB HIS B 8 ? UNP Q5LAZ3 ? ? 'expression tag' -11 27 2 3FMB HIS B 9 ? UNP Q5LAZ3 ? ? 'expression tag' -10 28 2 3FMB HIS B 10 ? UNP Q5LAZ3 ? ? 'expression tag' -9 29 2 3FMB HIS B 11 ? UNP Q5LAZ3 ? ? 'expression tag' -8 30 2 3FMB HIS B 12 ? UNP Q5LAZ3 ? ? 'expression tag' -7 31 2 3FMB GLU B 13 ? UNP Q5LAZ3 ? ? 'expression tag' -6 32 2 3FMB ASN B 14 ? UNP Q5LAZ3 ? ? 'expression tag' -5 33 2 3FMB LEU B 15 ? UNP Q5LAZ3 ? ? 'expression tag' -4 34 2 3FMB TYR B 16 ? UNP Q5LAZ3 ? ? 'expression tag' -3 35 2 3FMB PHE B 17 ? UNP Q5LAZ3 ? ? 'expression tag' -2 36 2 3FMB GLN B 18 ? UNP Q5LAZ3 ? ? 'expression tag' -1 37 2 3FMB GLY B 19 ? UNP Q5LAZ3 ? ? 'expression tag' 0 38 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3FMB # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.19 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 61.40 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details 'NANODROP, 0.2M (NH4)2SO4, 20.0% PEG 3350, No Buffer pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2008-11-12 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97867 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list '0.91837, 0.97867' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3FMB _reflns.d_resolution_high 1.85 _reflns.d_resolution_low 29.399 _reflns.number_obs 31933 _reflns.pdbx_Rmerge_I_obs 0.090 _reflns.percent_possible_obs 99.700 _reflns.B_iso_Wilson_estimate 29.156 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.85 1.92 39082 ? 6033 0.012 1.7 ? ? ? ? ? 98.60 1 1 1.92 1.99 36416 ? 5322 0.012 2.5 ? ? ? ? ? 99.80 2 1 1.99 2.08 40488 ? 5820 0.012 3.6 ? ? ? ? ? 100.00 3 1 2.08 2.19 41884 ? 5896 0.012 5.2 ? ? ? ? ? 100.00 4 1 2.19 2.33 43242 ? 5948 0.012 6.8 ? ? ? ? ? 99.90 5 1 2.33 2.51 43495 ? 5833 0.012 9.6 ? ? ? ? ? 99.90 6 1 2.51 2.76 44281 ? 5783 0.012 13.7 ? ? ? ? ? 99.90 7 1 2.76 3.16 45362 ? 5859 0.012 20.0 ? ? ? ? ? 99.90 8 1 3.16 3.98 45094 ? 5849 0.012 31.9 ? ? ? ? ? 99.80 9 1 3.98 29.399 45390 ? 5884 0.012 39.3 ? ? ? ? ? 99.50 10 1 # _refine.entry_id 3FMB _refine.ls_d_res_high 1.850 _refine.ls_d_res_low 29.399 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.720 _refine.ls_number_reflns_obs 31830 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. SULFATE (SO4) IONS FROM CRYSTALLIZATION CONDITION AND ETHYLENE GLYCOL (EDO) FROM CRYO SOLUTION WERE MODELED. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.172 _refine.ls_R_factor_R_work 0.170 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.205 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1612 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 32.402 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.580 _refine.aniso_B[2][2] 0.580 _refine.aniso_B[3][3] -0.870 _refine.aniso_B[1][2] 0.290 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.965 _refine.correlation_coeff_Fo_to_Fc_free 0.951 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.098 _refine.pdbx_overall_ESU_R_Free 0.100 _refine.overall_SU_ML 0.068 _refine.overall_SU_B 4.322 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 76.73 _refine.B_iso_min 18.59 _refine.occupancy_max 1.00 _refine.occupancy_min 0.37 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1646 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 30 _refine_hist.number_atoms_solvent 294 _refine_hist.number_atoms_total 1970 _refine_hist.d_res_high 1.850 _refine_hist.d_res_low 29.399 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 1780 0.017 0.022 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 1212 0.008 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 2407 1.468 1.972 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 2975 0.971 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 220 5.545 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 82 31.697 25.122 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 322 13.028 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 7 14.104 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 264 0.093 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 1975 0.007 0.020 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 346 0.002 0.020 ? ? r_nbd_refined 'X-RAY DIFFRACTION' 335 0.212 0.200 ? ? r_nbd_other 'X-RAY DIFFRACTION' 1251 0.199 0.200 ? ? r_nbtor_refined 'X-RAY DIFFRACTION' 845 0.176 0.200 ? ? r_nbtor_other 'X-RAY DIFFRACTION' 878 0.085 0.200 ? ? r_xyhbond_nbd_refined 'X-RAY DIFFRACTION' 220 0.167 0.200 ? ? r_symmetry_vdw_refined 'X-RAY DIFFRACTION' 10 0.148 0.200 ? ? r_symmetry_vdw_other 'X-RAY DIFFRACTION' 21 0.185 0.200 ? ? r_symmetry_hbond_refined 'X-RAY DIFFRACTION' 11 0.186 0.200 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 1336 2.080 3.000 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 426 0.508 3.000 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 1756 2.440 5.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 796 4.731 8.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 651 6.465 11.000 ? ? # loop_ _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso 'X-RAY DIFFRACTION' 1 1 'LOOSE POSITIONAL' A 1349 0.350 5.000 1 ? ? ? 'X-RAY DIFFRACTION' 1 2 'LOOSE THERMAL' A 1349 1.760 10.000 2 ? ? ? # _refine_ls_shell.d_res_high 1.850 _refine_ls_shell.d_res_low 1.897 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 97.910 _refine_ls_shell.number_reflns_R_work 2135 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.261 _refine_ls_shell.R_factor_R_free 0.358 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 110 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2245 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.selection_details _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id 1 1 1 6 A -3 A 99 ? . . . . . . . . 1 2 1 6 B -3 B 99 ? . . . . . . . . # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 3FMB _struct.title ;Crystal structure of dimeric protein of unknown function and ferredoxin-like fold (YP_212648.1) from Bacteroides fragilis NCTC 9343 at 1.85 A resolution ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;YP_212648.1, Stress responsive A/B Barrel Domain, dimeric protein of unknown function and ferredoxin-like fold, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, UNKNOWN FUNCTION ; _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.entry_id 3FMB # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 4 ? K N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 34 ? ALA A 51 ? PRO A 15 ALA A 32 1 ? 18 HELX_P HELX_P2 2 LEU A 52 ? LYS A 55 ? LEU A 33 LYS A 36 5 ? 4 HELX_P HELX_P3 3 ASN A 84 ? HIS A 94 ? ASN A 65 HIS A 75 1 ? 11 HELX_P HELX_P4 4 HIS A 94 ? ILE A 103 ? HIS A 75 ILE A 84 1 ? 10 HELX_P HELX_P5 5 PRO B 34 ? ALA B 51 ? PRO B 15 ALA B 32 1 ? 18 HELX_P HELX_P6 6 LEU B 52 ? LYS B 55 ? LEU B 33 LYS B 36 5 ? 4 HELX_P HELX_P7 7 ASN B 84 ? HIS B 94 ? ASN B 65 HIS B 75 1 ? 11 HELX_P HELX_P8 8 HIS B 94 ? ILE B 103 ? HIS B 75 ILE B 84 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 19 C ? ? ? 1_555 A MSE 20 N ? ? A GLY 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale2 covale both ? A MSE 20 C ? ? ? 1_555 A VAL 21 N ? ? A MSE 1 A VAL 2 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale3 covale both ? A VAL 41 C ? ? ? 1_555 A MSE 42 N ? ? A VAL 22 A MSE 23 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale4 covale both ? A MSE 42 C ? ? ? 1_555 A ASN 43 N ? ? A MSE 23 A ASN 24 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale5 covale both ? A ASN 67 C ? ? ? 1_555 A MSE 68 N A ? A ASN 48 A MSE 49 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale6 covale both ? A ASN 67 C ? ? ? 1_555 A MSE 68 N B ? A ASN 48 A MSE 49 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale7 covale both ? A MSE 68 C A ? ? 1_555 A ASN 69 N ? ? A MSE 49 A ASN 50 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale8 covale both ? A MSE 68 C B ? ? 1_555 A ASN 69 N ? ? A MSE 49 A ASN 50 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale9 covale both ? B GLY 19 C ? ? ? 1_555 B MSE 20 N ? ? B GLY 0 B MSE 1 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale10 covale both ? B MSE 20 C ? ? ? 1_555 B VAL 21 N ? ? B MSE 1 B VAL 2 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale11 covale both ? B VAL 41 C ? ? ? 1_555 B MSE 42 N ? ? B VAL 22 B MSE 23 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale12 covale both ? B MSE 42 C ? ? ? 1_555 B ASN 43 N ? ? B MSE 23 B ASN 24 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale13 covale both ? B ASN 67 C ? ? ? 1_555 B MSE 68 N A ? B ASN 48 B MSE 49 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale14 covale both ? B ASN 67 C ? ? ? 1_555 B MSE 68 N B ? B ASN 48 B MSE 49 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale15 covale both ? B MSE 68 C A ? ? 1_555 B ASN 69 N ? ? B MSE 49 B ASN 50 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale16 covale both ? B MSE 68 C B ? ? 1_555 B ASN 69 N ? ? B MSE 49 B ASN 50 1_555 ? ? ? ? ? ? ? 1.327 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 61 ? LEU A 66 ? LYS A 42 LEU A 47 A 2 ILE A 76 ? PHE A 82 ? ILE A 57 PHE A 63 A 3 MSE A 20 ? LEU A 29 ? MSE A 1 LEU A 10 A 4 LYS A 108 ? PHE A 118 ? LYS A 89 PHE A 99 B 1 LYS B 61 ? LEU B 66 ? LYS B 42 LEU B 47 B 2 ILE B 76 ? PHE B 82 ? ILE B 57 PHE B 63 B 3 MSE B 20 ? LEU B 29 ? MSE B 1 LEU B 10 B 4 LYS B 108 ? PHE B 118 ? LYS B 89 PHE B 99 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLY A 65 ? N GLY A 46 O ALA A 77 ? O ALA A 58 A 2 3 O LEU A 78 ? O LEU A 59 N VAL A 25 ? N VAL A 6 A 3 4 N LYS A 22 ? N LYS A 3 O TYR A 116 ? O TYR A 97 B 1 2 N GLY B 65 ? N GLY B 46 O ALA B 77 ? O ALA B 58 B 2 3 O PHE B 82 ? O PHE B 63 N VAL B 21 ? N VAL B 2 B 3 4 N LYS B 22 ? N LYS B 3 O TYR B 116 ? O TYR B 97 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 100 ? 7 'BINDING SITE FOR RESIDUE SO4 A 100' AC2 Software A EDO 101 ? 7 'BINDING SITE FOR RESIDUE EDO A 101' AC3 Software B SO4 100 ? 7 'BINDING SITE FOR RESIDUE SO4 B 100' AC4 Software B EDO 101 ? 8 'BINDING SITE FOR RESIDUE EDO B 101' AC5 Software B EDO 102 ? 3 'BINDING SITE FOR RESIDUE EDO B 102' AC6 Software B EDO 103 ? 5 'BINDING SITE FOR RESIDUE EDO B 103' AC7 Software B EDO 104 ? 4 'BINDING SITE FOR RESIDUE EDO B 104' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 HIS A 23 ? HIS A 4 . ? 1_555 ? 2 AC1 7 TYR A 91 ? TYR A 72 . ? 1_555 ? 3 AC1 7 HIS A 97 ? HIS A 78 . ? 1_555 ? 4 AC1 7 ARG A 111 ? ARG A 92 . ? 1_555 ? 5 AC1 7 HOH J . ? HOH A 127 . ? 1_555 ? 6 AC1 7 HOH J . ? HOH A 259 . ? 1_555 ? 7 AC1 7 HOH K . ? HOH B 172 . ? 1_555 ? 8 AC2 7 ASN A 67 ? ASN A 48 . ? 1_555 ? 9 AC2 7 GLU A 72 ? GLU A 53 . ? 1_555 ? 10 AC2 7 TRP A 74 ? TRP A 55 . ? 1_555 ? 11 AC2 7 ASN A 75 ? ASN A 56 . ? 1_555 ? 12 AC2 7 HOH J . ? HOH A 209 . ? 1_555 ? 13 AC2 7 VAL B 35 ? VAL B 16 . ? 8_665 ? 14 AC2 7 GLU B 36 ? GLU B 17 . ? 8_665 ? 15 AC3 7 HIS B 23 ? HIS B 4 . ? 1_555 ? 16 AC3 7 TYR B 91 ? TYR B 72 . ? 1_555 ? 17 AC3 7 HIS B 97 ? HIS B 78 . ? 1_555 ? 18 AC3 7 ARG B 111 ? ARG B 92 . ? 1_555 ? 19 AC3 7 HOH K . ? HOH B 109 . ? 1_555 ? 20 AC3 7 HOH K . ? HOH B 142 . ? 1_555 ? 21 AC3 7 HOH K . ? HOH B 282 . ? 1_555 ? 22 AC4 8 LYS A 89 ? LYS A 70 . ? 1_555 ? 23 AC4 8 ALA A 92 ? ALA A 73 . ? 1_555 ? 24 AC4 8 HOH J . ? HOH A 109 . ? 1_555 ? 25 AC4 8 HOH J . ? HOH A 300 . ? 1_555 ? 26 AC4 8 ASN B 69 ? ASN B 50 . ? 1_555 ? 27 AC4 8 HOH K . ? HOH B 157 . ? 1_555 ? 28 AC4 8 HOH K . ? HOH B 172 . ? 1_555 ? 29 AC4 8 HOH K . ? HOH B 223 . ? 1_555 ? 30 AC5 3 MSE B 68 ? MSE B 49 . ? 1_555 ? 31 AC5 3 PRO B 70 ? PRO B 51 . ? 1_555 ? 32 AC5 3 EDO I . ? EDO B 104 . ? 1_555 ? 33 AC6 5 PRO A 95 ? PRO A 76 . ? 5_554 ? 34 AC6 5 ASN B 84 ? ASN B 65 . ? 1_555 ? 35 AC6 5 ASP B 87 ? ASP B 68 . ? 1_555 ? 36 AC6 5 HOH K . ? HOH B 193 . ? 1_555 ? 37 AC6 5 HOH K . ? HOH B 295 . ? 1_555 ? 38 AC7 4 LEU B 39 ? LEU B 20 . ? 1_555 ? 39 AC7 4 EDO G . ? EDO B 102 . ? 1_555 ? 40 AC7 4 HOH K . ? HOH B 151 . ? 1_555 ? 41 AC7 4 HOH K . ? HOH B 233 . ? 1_555 ? # _atom_sites.entry_id 3FMB _atom_sites.fract_transf_matrix[1][1] 0.013829 _atom_sites.fract_transf_matrix[1][2] 0.007984 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015969 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004291 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -18 ? ? ? A . n A 1 2 GLY 2 -17 ? ? ? A . n A 1 3 SER 3 -16 ? ? ? A . n A 1 4 ASP 4 -15 ? ? ? A . n A 1 5 LYS 5 -14 ? ? ? A . n A 1 6 ILE 6 -13 ? ? ? A . n A 1 7 HIS 7 -12 ? ? ? A . n A 1 8 HIS 8 -11 ? ? ? A . n A 1 9 HIS 9 -10 ? ? ? A . n A 1 10 HIS 10 -9 ? ? ? A . n A 1 11 HIS 11 -8 ? ? ? A . n A 1 12 HIS 12 -7 ? ? ? A . n A 1 13 GLU 13 -6 ? ? ? A . n A 1 14 ASN 14 -5 ? ? ? A . n A 1 15 LEU 15 -4 ? ? ? A . n A 1 16 TYR 16 -3 -3 TYR TYR A . n A 1 17 PHE 17 -2 -2 PHE PHE A . n A 1 18 GLN 18 -1 -1 GLN GLN A . n A 1 19 GLY 19 0 0 GLY GLY A . n A 1 20 MSE 20 1 1 MSE MSE A . n A 1 21 VAL 21 2 2 VAL VAL A . n A 1 22 LYS 22 3 3 LYS LYS A . n A 1 23 HIS 23 4 4 HIS HIS A . n A 1 24 ILE 24 5 5 ILE ILE A . n A 1 25 VAL 25 6 6 VAL VAL A . n A 1 26 LEU 26 7 7 LEU LEU A . n A 1 27 PHE 27 8 8 PHE PHE A . n A 1 28 LYS 28 9 9 LYS LYS A . n A 1 29 LEU 29 10 10 LEU LEU A . n A 1 30 ARG 30 11 11 ARG ARG A . n A 1 31 ASP 31 12 12 ASP ASP A . n A 1 32 ASP 32 13 13 ASP ASP A . n A 1 33 VAL 33 14 14 VAL VAL A . n A 1 34 PRO 34 15 15 PRO PRO A . n A 1 35 VAL 35 16 16 VAL VAL A . n A 1 36 GLU 36 17 17 GLU GLU A . n A 1 37 GLU 37 18 18 GLU GLU A . n A 1 38 LYS 38 19 19 LYS LYS A . n A 1 39 LEU 39 20 20 LEU LEU A . n A 1 40 VAL 40 21 21 VAL VAL A . n A 1 41 VAL 41 22 22 VAL VAL A . n A 1 42 MSE 42 23 23 MSE MSE A . n A 1 43 ASN 43 24 24 ASN ASN A . n A 1 44 SER 44 25 25 SER SER A . n A 1 45 PHE 45 26 26 PHE PHE A . n A 1 46 LYS 46 27 27 LYS LYS A . n A 1 47 GLU 47 28 28 GLU GLU A . n A 1 48 ALA 48 29 29 ALA ALA A . n A 1 49 ILE 49 30 30 ILE ILE A . n A 1 50 GLU 50 31 31 GLU GLU A . n A 1 51 ALA 51 32 32 ALA ALA A . n A 1 52 LEU 52 33 33 LEU LEU A . n A 1 53 PRO 53 34 34 PRO PRO A . n A 1 54 ALA 54 35 35 ALA ALA A . n A 1 55 LYS 55 36 36 LYS LYS A . n A 1 56 ILE 56 37 37 ILE ILE A . n A 1 57 SER 57 38 38 SER SER A . n A 1 58 VAL 58 39 39 VAL VAL A . n A 1 59 ILE 59 40 40 ILE ILE A . n A 1 60 ARG 60 41 41 ARG ARG A . n A 1 61 LYS 61 42 42 LYS LYS A . n A 1 62 ILE 62 43 43 ILE ILE A . n A 1 63 GLU 63 44 44 GLU GLU A . n A 1 64 VAL 64 45 45 VAL VAL A . n A 1 65 GLY 65 46 46 GLY GLY A . n A 1 66 LEU 66 47 47 LEU LEU A . n A 1 67 ASN 67 48 48 ASN ASN A . n A 1 68 MSE 68 49 49 MSE MSE A . n A 1 69 ASN 69 50 50 ASN ASN A . n A 1 70 PRO 70 51 51 PRO PRO A . n A 1 71 GLY 71 52 52 GLY GLY A . n A 1 72 GLU 72 53 53 GLU GLU A . n A 1 73 THR 73 54 54 THR THR A . n A 1 74 TRP 74 55 55 TRP TRP A . n A 1 75 ASN 75 56 56 ASN ASN A . n A 1 76 ILE 76 57 57 ILE ILE A . n A 1 77 ALA 77 58 58 ALA ALA A . n A 1 78 LEU 78 59 59 LEU LEU A . n A 1 79 TYR 79 60 60 TYR TYR A . n A 1 80 SER 80 61 61 SER SER A . n A 1 81 GLU 81 62 62 GLU GLU A . n A 1 82 PHE 82 63 63 PHE PHE A . n A 1 83 ASP 83 64 64 ASP ASP A . n A 1 84 ASN 84 65 65 ASN ASN A . n A 1 85 LEU 85 66 66 LEU LEU A . n A 1 86 ASP 86 67 67 ASP ASP A . n A 1 87 ASP 87 68 68 ASP ASP A . n A 1 88 VAL 88 69 69 VAL VAL A . n A 1 89 LYS 89 70 70 LYS LYS A . n A 1 90 PHE 90 71 71 PHE PHE A . n A 1 91 TYR 91 72 72 TYR TYR A . n A 1 92 ALA 92 73 73 ALA ALA A . n A 1 93 THR 93 74 74 THR THR A . n A 1 94 HIS 94 75 75 HIS HIS A . n A 1 95 PRO 95 76 76 PRO PRO A . n A 1 96 GLU 96 77 77 GLU GLU A . n A 1 97 HIS 97 78 78 HIS HIS A . n A 1 98 VAL 98 79 79 VAL VAL A . n A 1 99 ALA 99 80 80 ALA ALA A . n A 1 100 ALA 100 81 81 ALA ALA A . n A 1 101 GLY 101 82 82 GLY GLY A . n A 1 102 LYS 102 83 83 LYS LYS A . n A 1 103 ILE 103 84 84 ILE ILE A . n A 1 104 LEU 104 85 85 LEU LEU A . n A 1 105 ALA 105 86 86 ALA ALA A . n A 1 106 GLU 106 87 87 GLU GLU A . n A 1 107 THR 107 88 88 THR THR A . n A 1 108 LYS 108 89 89 LYS LYS A . n A 1 109 GLU 109 90 90 GLU GLU A . n A 1 110 SER 110 91 91 SER SER A . n A 1 111 ARG 111 92 92 ARG ARG A . n A 1 112 ALA 112 93 93 ALA ALA A . n A 1 113 CYS 113 94 94 CYS CYS A . n A 1 114 VAL 114 95 95 VAL VAL A . n A 1 115 ASP 115 96 96 ASP ASP A . n A 1 116 TYR 116 97 97 TYR TYR A . n A 1 117 GLU 117 98 98 GLU GLU A . n A 1 118 PHE 118 99 99 PHE PHE A . n B 1 1 MSE 1 -18 ? ? ? B . n B 1 2 GLY 2 -17 ? ? ? B . n B 1 3 SER 3 -16 ? ? ? B . n B 1 4 ASP 4 -15 ? ? ? B . n B 1 5 LYS 5 -14 ? ? ? B . n B 1 6 ILE 6 -13 ? ? ? B . n B 1 7 HIS 7 -12 ? ? ? B . n B 1 8 HIS 8 -11 ? ? ? B . n B 1 9 HIS 9 -10 ? ? ? B . n B 1 10 HIS 10 -9 ? ? ? B . n B 1 11 HIS 11 -8 ? ? ? B . n B 1 12 HIS 12 -7 ? ? ? B . n B 1 13 GLU 13 -6 ? ? ? B . n B 1 14 ASN 14 -5 ? ? ? B . n B 1 15 LEU 15 -4 ? ? ? B . n B 1 16 TYR 16 -3 -3 TYR TYR B . n B 1 17 PHE 17 -2 -2 PHE PHE B . n B 1 18 GLN 18 -1 -1 GLN GLN B . n B 1 19 GLY 19 0 0 GLY GLY B . n B 1 20 MSE 20 1 1 MSE MSE B . n B 1 21 VAL 21 2 2 VAL VAL B . n B 1 22 LYS 22 3 3 LYS LYS B . n B 1 23 HIS 23 4 4 HIS HIS B . n B 1 24 ILE 24 5 5 ILE ILE B . n B 1 25 VAL 25 6 6 VAL VAL B . n B 1 26 LEU 26 7 7 LEU LEU B . n B 1 27 PHE 27 8 8 PHE PHE B . n B 1 28 LYS 28 9 9 LYS LYS B . n B 1 29 LEU 29 10 10 LEU LEU B . n B 1 30 ARG 30 11 11 ARG ARG B . n B 1 31 ASP 31 12 12 ASP ASP B . n B 1 32 ASP 32 13 13 ASP ASP B . n B 1 33 VAL 33 14 14 VAL VAL B . n B 1 34 PRO 34 15 15 PRO PRO B . n B 1 35 VAL 35 16 16 VAL VAL B . n B 1 36 GLU 36 17 17 GLU GLU B . n B 1 37 GLU 37 18 18 GLU GLU B . n B 1 38 LYS 38 19 19 LYS LYS B . n B 1 39 LEU 39 20 20 LEU LEU B . n B 1 40 VAL 40 21 21 VAL VAL B . n B 1 41 VAL 41 22 22 VAL VAL B . n B 1 42 MSE 42 23 23 MSE MSE B . n B 1 43 ASN 43 24 24 ASN ASN B . n B 1 44 SER 44 25 25 SER SER B . n B 1 45 PHE 45 26 26 PHE PHE B . n B 1 46 LYS 46 27 27 LYS LYS B . n B 1 47 GLU 47 28 28 GLU GLU B . n B 1 48 ALA 48 29 29 ALA ALA B . n B 1 49 ILE 49 30 30 ILE ILE B . n B 1 50 GLU 50 31 31 GLU GLU B . n B 1 51 ALA 51 32 32 ALA ALA B . n B 1 52 LEU 52 33 33 LEU LEU B . n B 1 53 PRO 53 34 34 PRO PRO B . n B 1 54 ALA 54 35 35 ALA ALA B . n B 1 55 LYS 55 36 36 LYS LYS B . n B 1 56 ILE 56 37 37 ILE ILE B . n B 1 57 SER 57 38 38 SER SER B . n B 1 58 VAL 58 39 39 VAL VAL B . n B 1 59 ILE 59 40 40 ILE ILE B . n B 1 60 ARG 60 41 41 ARG ARG B . n B 1 61 LYS 61 42 42 LYS LYS B . n B 1 62 ILE 62 43 43 ILE ILE B . n B 1 63 GLU 63 44 44 GLU GLU B . n B 1 64 VAL 64 45 45 VAL VAL B . n B 1 65 GLY 65 46 46 GLY GLY B . n B 1 66 LEU 66 47 47 LEU LEU B . n B 1 67 ASN 67 48 48 ASN ASN B . n B 1 68 MSE 68 49 49 MSE MSE B . n B 1 69 ASN 69 50 50 ASN ASN B . n B 1 70 PRO 70 51 51 PRO PRO B . n B 1 71 GLY 71 52 52 GLY GLY B . n B 1 72 GLU 72 53 53 GLU GLU B . n B 1 73 THR 73 54 54 THR THR B . n B 1 74 TRP 74 55 55 TRP TRP B . n B 1 75 ASN 75 56 56 ASN ASN B . n B 1 76 ILE 76 57 57 ILE ILE B . n B 1 77 ALA 77 58 58 ALA ALA B . n B 1 78 LEU 78 59 59 LEU LEU B . n B 1 79 TYR 79 60 60 TYR TYR B . n B 1 80 SER 80 61 61 SER SER B . n B 1 81 GLU 81 62 62 GLU GLU B . n B 1 82 PHE 82 63 63 PHE PHE B . n B 1 83 ASP 83 64 64 ASP ASP B . n B 1 84 ASN 84 65 65 ASN ASN B . n B 1 85 LEU 85 66 66 LEU LEU B . n B 1 86 ASP 86 67 67 ASP ASP B . n B 1 87 ASP 87 68 68 ASP ASP B . n B 1 88 VAL 88 69 69 VAL VAL B . n B 1 89 LYS 89 70 70 LYS LYS B . n B 1 90 PHE 90 71 71 PHE PHE B . n B 1 91 TYR 91 72 72 TYR TYR B . n B 1 92 ALA 92 73 73 ALA ALA B . n B 1 93 THR 93 74 74 THR THR B . n B 1 94 HIS 94 75 75 HIS HIS B . n B 1 95 PRO 95 76 76 PRO PRO B . n B 1 96 GLU 96 77 77 GLU GLU B . n B 1 97 HIS 97 78 78 HIS HIS B . n B 1 98 VAL 98 79 79 VAL VAL B . n B 1 99 ALA 99 80 80 ALA ALA B . n B 1 100 ALA 100 81 81 ALA ALA B . n B 1 101 GLY 101 82 82 GLY GLY B . n B 1 102 LYS 102 83 83 LYS LYS B . n B 1 103 ILE 103 84 84 ILE ILE B . n B 1 104 LEU 104 85 85 LEU LEU B . n B 1 105 ALA 105 86 86 ALA ALA B . n B 1 106 GLU 106 87 87 GLU GLU B . n B 1 107 THR 107 88 88 THR THR B . n B 1 108 LYS 108 89 89 LYS LYS B . n B 1 109 GLU 109 90 90 GLU GLU B . n B 1 110 SER 110 91 91 SER SER B . n B 1 111 ARG 111 92 92 ARG ARG B . n B 1 112 ALA 112 93 93 ALA ALA B . n B 1 113 CYS 113 94 94 CYS CYS B . n B 1 114 VAL 114 95 95 VAL VAL B . n B 1 115 ASP 115 96 96 ASP ASP B . n B 1 116 TYR 116 97 97 TYR TYR B . n B 1 117 GLU 117 98 98 GLU GLU B . n B 1 118 PHE 118 99 99 PHE PHE B . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 1 100 2 SO4 SO4 A . D 3 EDO 1 101 4 EDO EDO A . E 2 SO4 1 100 1 SO4 SO4 B . F 3 EDO 1 101 3 EDO EDO B . G 3 EDO 1 102 5 EDO EDO B . H 3 EDO 1 103 6 EDO EDO B . I 3 EDO 1 104 7 EDO EDO B . J 4 HOH 1 102 102 HOH HOH A . J 4 HOH 2 103 103 HOH HOH A . J 4 HOH 3 105 9 HOH HOH A . J 4 HOH 4 106 106 HOH HOH A . J 4 HOH 5 107 10 HOH HOH A . J 4 HOH 6 108 108 HOH HOH A . J 4 HOH 7 109 11 HOH HOH A . J 4 HOH 8 110 110 HOH HOH A . J 4 HOH 9 111 12 HOH HOH A . J 4 HOH 10 112 112 HOH HOH A . J 4 HOH 11 114 114 HOH HOH A . J 4 HOH 12 115 115 HOH HOH A . J 4 HOH 13 116 14 HOH HOH A . J 4 HOH 14 117 15 HOH HOH A . J 4 HOH 15 118 118 HOH HOH A . J 4 HOH 16 119 119 HOH HOH A . J 4 HOH 17 120 120 HOH HOH A . J 4 HOH 18 121 121 HOH HOH A . J 4 HOH 19 122 122 HOH HOH A . J 4 HOH 20 123 123 HOH HOH A . J 4 HOH 21 124 124 HOH HOH A . J 4 HOH 22 125 125 HOH HOH A . J 4 HOH 23 127 17 HOH HOH A . J 4 HOH 24 128 18 HOH HOH A . J 4 HOH 25 130 20 HOH HOH A . J 4 HOH 26 131 131 HOH HOH A . J 4 HOH 27 132 132 HOH HOH A . J 4 HOH 28 134 134 HOH HOH A . J 4 HOH 29 135 135 HOH HOH A . J 4 HOH 30 136 136 HOH HOH A . J 4 HOH 31 137 137 HOH HOH A . J 4 HOH 32 138 22 HOH HOH A . J 4 HOH 33 139 139 HOH HOH A . J 4 HOH 34 140 140 HOH HOH A . J 4 HOH 35 141 141 HOH HOH A . J 4 HOH 36 144 144 HOH HOH A . J 4 HOH 37 145 145 HOH HOH A . J 4 HOH 38 146 146 HOH HOH A . J 4 HOH 39 147 147 HOH HOH A . J 4 HOH 40 148 148 HOH HOH A . J 4 HOH 41 149 149 HOH HOH A . J 4 HOH 42 150 150 HOH HOH A . J 4 HOH 43 151 25 HOH HOH A . J 4 HOH 44 152 152 HOH HOH A . J 4 HOH 45 153 26 HOH HOH A . J 4 HOH 46 154 27 HOH HOH A . J 4 HOH 47 155 28 HOH HOH A . J 4 HOH 48 156 156 HOH HOH A . J 4 HOH 49 157 157 HOH HOH A . J 4 HOH 50 158 158 HOH HOH A . J 4 HOH 51 159 29 HOH HOH A . J 4 HOH 52 160 30 HOH HOH A . J 4 HOH 53 162 162 HOH HOH A . J 4 HOH 54 163 32 HOH HOH A . J 4 HOH 55 164 164 HOH HOH A . J 4 HOH 56 166 166 HOH HOH A . J 4 HOH 57 168 168 HOH HOH A . J 4 HOH 58 169 35 HOH HOH A . J 4 HOH 59 171 171 HOH HOH A . J 4 HOH 60 173 173 HOH HOH A . J 4 HOH 61 176 176 HOH HOH A . J 4 HOH 62 179 179 HOH HOH A . J 4 HOH 63 180 180 HOH HOH A . J 4 HOH 64 182 43 HOH HOH A . J 4 HOH 65 184 184 HOH HOH A . J 4 HOH 66 185 185 HOH HOH A . J 4 HOH 67 186 45 HOH HOH A . J 4 HOH 68 188 188 HOH HOH A . J 4 HOH 69 189 47 HOH HOH A . J 4 HOH 70 190 48 HOH HOH A . J 4 HOH 71 191 191 HOH HOH A . J 4 HOH 72 193 193 HOH HOH A . J 4 HOH 73 194 50 HOH HOH A . J 4 HOH 74 195 195 HOH HOH A . J 4 HOH 75 197 197 HOH HOH A . J 4 HOH 76 200 200 HOH HOH A . J 4 HOH 77 201 201 HOH HOH A . J 4 HOH 78 202 202 HOH HOH A . J 4 HOH 79 204 204 HOH HOH A . J 4 HOH 80 205 205 HOH HOH A . J 4 HOH 81 207 56 HOH HOH A . J 4 HOH 82 208 208 HOH HOH A . J 4 HOH 83 209 57 HOH HOH A . J 4 HOH 84 213 213 HOH HOH A . J 4 HOH 85 214 61 HOH HOH A . J 4 HOH 86 215 215 HOH HOH A . J 4 HOH 87 217 63 HOH HOH A . J 4 HOH 88 221 221 HOH HOH A . J 4 HOH 89 222 67 HOH HOH A . J 4 HOH 90 223 68 HOH HOH A . J 4 HOH 91 224 224 HOH HOH A . J 4 HOH 92 228 228 HOH HOH A . J 4 HOH 93 230 73 HOH HOH A . J 4 HOH 94 231 74 HOH HOH A . J 4 HOH 95 234 77 HOH HOH A . J 4 HOH 96 235 235 HOH HOH A . J 4 HOH 97 236 236 HOH HOH A . J 4 HOH 98 237 237 HOH HOH A . J 4 HOH 99 239 239 HOH HOH A . J 4 HOH 100 240 79 HOH HOH A . J 4 HOH 101 241 241 HOH HOH A . J 4 HOH 102 242 242 HOH HOH A . J 4 HOH 103 244 244 HOH HOH A . J 4 HOH 104 245 245 HOH HOH A . J 4 HOH 105 246 246 HOH HOH A . J 4 HOH 106 247 81 HOH HOH A . J 4 HOH 107 248 248 HOH HOH A . J 4 HOH 108 249 82 HOH HOH A . J 4 HOH 109 250 83 HOH HOH A . J 4 HOH 110 252 252 HOH HOH A . J 4 HOH 111 253 253 HOH HOH A . J 4 HOH 112 254 254 HOH HOH A . J 4 HOH 113 255 255 HOH HOH A . J 4 HOH 114 256 256 HOH HOH A . J 4 HOH 115 257 257 HOH HOH A . J 4 HOH 116 258 258 HOH HOH A . J 4 HOH 117 259 259 HOH HOH A . J 4 HOH 118 260 260 HOH HOH A . J 4 HOH 119 261 85 HOH HOH A . J 4 HOH 120 262 262 HOH HOH A . J 4 HOH 121 263 86 HOH HOH A . J 4 HOH 122 264 87 HOH HOH A . J 4 HOH 123 265 265 HOH HOH A . J 4 HOH 124 266 266 HOH HOH A . J 4 HOH 125 267 88 HOH HOH A . J 4 HOH 126 268 89 HOH HOH A . J 4 HOH 127 271 92 HOH HOH A . J 4 HOH 128 272 93 HOH HOH A . J 4 HOH 129 274 274 HOH HOH A . J 4 HOH 130 276 96 HOH HOH A . J 4 HOH 131 278 98 HOH HOH A . J 4 HOH 132 280 280 HOH HOH A . J 4 HOH 133 281 281 HOH HOH A . J 4 HOH 134 282 100 HOH HOH A . J 4 HOH 135 283 283 HOH HOH A . J 4 HOH 136 286 286 HOH HOH A . J 4 HOH 137 287 287 HOH HOH A . J 4 HOH 138 292 292 HOH HOH A . J 4 HOH 139 294 294 HOH HOH A . J 4 HOH 140 296 296 HOH HOH A . J 4 HOH 141 297 297 HOH HOH A . J 4 HOH 142 300 300 HOH HOH A . K 4 HOH 1 105 105 HOH HOH B . K 4 HOH 2 106 101 HOH HOH B . K 4 HOH 3 107 107 HOH HOH B . K 4 HOH 4 108 104 HOH HOH B . K 4 HOH 5 109 109 HOH HOH B . K 4 HOH 6 110 8 HOH HOH B . K 4 HOH 7 111 111 HOH HOH B . K 4 HOH 8 112 113 HOH HOH B . K 4 HOH 9 113 13 HOH HOH B . K 4 HOH 10 114 126 HOH HOH B . K 4 HOH 11 115 129 HOH HOH B . K 4 HOH 12 116 116 HOH HOH B . K 4 HOH 13 117 117 HOH HOH B . K 4 HOH 14 118 133 HOH HOH B . K 4 HOH 15 119 142 HOH HOH B . K 4 HOH 16 120 143 HOH HOH B . K 4 HOH 17 121 161 HOH HOH B . K 4 HOH 18 122 165 HOH HOH B . K 4 HOH 19 123 167 HOH HOH B . K 4 HOH 20 124 170 HOH HOH B . K 4 HOH 21 125 172 HOH HOH B . K 4 HOH 22 126 16 HOH HOH B . K 4 HOH 23 127 127 HOH HOH B . K 4 HOH 24 128 128 HOH HOH B . K 4 HOH 25 129 19 HOH HOH B . K 4 HOH 26 130 130 HOH HOH B . K 4 HOH 27 131 174 HOH HOH B . K 4 HOH 28 132 175 HOH HOH B . K 4 HOH 29 133 21 HOH HOH B . K 4 HOH 30 134 177 HOH HOH B . K 4 HOH 31 135 178 HOH HOH B . K 4 HOH 32 136 181 HOH HOH B . K 4 HOH 33 137 183 HOH HOH B . K 4 HOH 34 138 138 HOH HOH B . K 4 HOH 35 139 187 HOH HOH B . K 4 HOH 36 140 192 HOH HOH B . K 4 HOH 37 141 196 HOH HOH B . K 4 HOH 38 142 23 HOH HOH B . K 4 HOH 39 143 24 HOH HOH B . K 4 HOH 40 144 198 HOH HOH B . K 4 HOH 41 145 199 HOH HOH B . K 4 HOH 42 146 203 HOH HOH B . K 4 HOH 43 147 206 HOH HOH B . K 4 HOH 44 148 210 HOH HOH B . K 4 HOH 45 149 211 HOH HOH B . K 4 HOH 46 150 212 HOH HOH B . K 4 HOH 47 151 151 HOH HOH B . K 4 HOH 48 152 216 HOH HOH B . K 4 HOH 49 153 153 HOH HOH B . K 4 HOH 50 154 154 HOH HOH B . K 4 HOH 51 155 155 HOH HOH B . K 4 HOH 52 156 218 HOH HOH B . K 4 HOH 53 157 219 HOH HOH B . K 4 HOH 54 158 220 HOH HOH B . K 4 HOH 55 159 159 HOH HOH B . K 4 HOH 56 160 160 HOH HOH B . K 4 HOH 57 161 31 HOH HOH B . K 4 HOH 58 162 225 HOH HOH B . K 4 HOH 59 163 163 HOH HOH B . K 4 HOH 60 164 226 HOH HOH B . K 4 HOH 61 165 33 HOH HOH B . K 4 HOH 62 166 227 HOH HOH B . K 4 HOH 63 167 34 HOH HOH B . K 4 HOH 64 168 229 HOH HOH B . K 4 HOH 65 169 169 HOH HOH B . K 4 HOH 66 170 36 HOH HOH B . K 4 HOH 67 171 232 HOH HOH B . K 4 HOH 68 172 37 HOH HOH B . K 4 HOH 69 173 233 HOH HOH B . K 4 HOH 70 174 38 HOH HOH B . K 4 HOH 71 175 39 HOH HOH B . K 4 HOH 72 176 238 HOH HOH B . K 4 HOH 73 177 40 HOH HOH B . K 4 HOH 74 178 41 HOH HOH B . K 4 HOH 75 179 243 HOH HOH B . K 4 HOH 76 180 251 HOH HOH B . K 4 HOH 77 181 42 HOH HOH B . K 4 HOH 78 182 182 HOH HOH B . K 4 HOH 79 183 44 HOH HOH B . K 4 HOH 80 184 269 HOH HOH B . K 4 HOH 81 185 270 HOH HOH B . K 4 HOH 82 186 186 HOH HOH B . K 4 HOH 83 187 46 HOH HOH B . K 4 HOH 84 188 275 HOH HOH B . K 4 HOH 85 189 189 HOH HOH B . K 4 HOH 86 190 190 HOH HOH B . K 4 HOH 87 191 277 HOH HOH B . K 4 HOH 88 192 49 HOH HOH B . K 4 HOH 89 193 279 HOH HOH B . K 4 HOH 90 194 194 HOH HOH B . K 4 HOH 91 196 51 HOH HOH B . K 4 HOH 92 198 52 HOH HOH B . K 4 HOH 93 199 53 HOH HOH B . K 4 HOH 94 203 54 HOH HOH B . K 4 HOH 95 206 55 HOH HOH B . K 4 HOH 96 207 207 HOH HOH B . K 4 HOH 97 209 209 HOH HOH B . K 4 HOH 98 210 58 HOH HOH B . K 4 HOH 99 211 59 HOH HOH B . K 4 HOH 100 212 60 HOH HOH B . K 4 HOH 101 214 214 HOH HOH B . K 4 HOH 102 216 62 HOH HOH B . K 4 HOH 103 217 217 HOH HOH B . K 4 HOH 104 218 64 HOH HOH B . K 4 HOH 105 219 65 HOH HOH B . K 4 HOH 106 220 66 HOH HOH B . K 4 HOH 107 222 222 HOH HOH B . K 4 HOH 108 223 223 HOH HOH B . K 4 HOH 109 225 69 HOH HOH B . K 4 HOH 110 226 70 HOH HOH B . K 4 HOH 111 227 71 HOH HOH B . K 4 HOH 112 229 72 HOH HOH B . K 4 HOH 113 230 230 HOH HOH B . K 4 HOH 114 231 231 HOH HOH B . K 4 HOH 115 232 75 HOH HOH B . K 4 HOH 116 233 76 HOH HOH B . K 4 HOH 117 234 234 HOH HOH B . K 4 HOH 118 238 78 HOH HOH B . K 4 HOH 119 240 240 HOH HOH B . K 4 HOH 120 243 80 HOH HOH B . K 4 HOH 121 247 247 HOH HOH B . K 4 HOH 122 249 249 HOH HOH B . K 4 HOH 123 250 250 HOH HOH B . K 4 HOH 124 251 84 HOH HOH B . K 4 HOH 125 261 261 HOH HOH B . K 4 HOH 126 263 263 HOH HOH B . K 4 HOH 127 264 264 HOH HOH B . K 4 HOH 128 267 267 HOH HOH B . K 4 HOH 129 268 268 HOH HOH B . K 4 HOH 130 269 90 HOH HOH B . K 4 HOH 131 270 91 HOH HOH B . K 4 HOH 132 271 271 HOH HOH B . K 4 HOH 133 272 272 HOH HOH B . K 4 HOH 134 273 94 HOH HOH B . K 4 HOH 135 275 95 HOH HOH B . K 4 HOH 136 276 276 HOH HOH B . K 4 HOH 137 277 97 HOH HOH B . K 4 HOH 138 278 278 HOH HOH B . K 4 HOH 139 279 99 HOH HOH B . K 4 HOH 140 282 282 HOH HOH B . K 4 HOH 141 284 284 HOH HOH B . K 4 HOH 142 285 285 HOH HOH B . K 4 HOH 143 288 288 HOH HOH B . K 4 HOH 144 289 289 HOH HOH B . K 4 HOH 145 290 290 HOH HOH B . K 4 HOH 146 291 291 HOH HOH B . K 4 HOH 147 293 293 HOH HOH B . K 4 HOH 148 295 295 HOH HOH B . K 4 HOH 149 298 298 HOH HOH B . K 4 HOH 150 299 299 HOH HOH B . K 4 HOH 151 301 301 HOH HOH B . K 4 HOH 152 302 302 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 20 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 42 A MSE 23 ? MET SELENOMETHIONINE 3 A MSE 68 A MSE 49 ? MET SELENOMETHIONINE 4 B MSE 20 B MSE 1 ? MET SELENOMETHIONINE 5 B MSE 42 B MSE 23 ? MET SELENOMETHIONINE 6 B MSE 68 B MSE 49 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2230 ? 1 MORE -15.6 ? 1 'SSA (A^2)' 10340 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-01-27 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Source and taxonomy' 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' software 3 4 'Structure model' struct_conn 4 5 'Structure model' database_2 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined -7.0378 21.6418 10.0772 -0.0857 -0.0544 -0.0607 -0.0219 0.0425 -0.0009 2.2973 0.9893 2.8366 0.6849 0.3393 0.2516 0.0283 -0.0585 0.0302 -0.1668 -0.0698 0.0316 0.1071 0.3404 0.0372 'X-RAY DIFFRACTION' 2 ? refined -9.0056 26.7741 -7.4316 -0.1463 0.0068 -0.0651 -0.0221 0.0235 -0.0063 2.4509 0.7210 2.6405 -0.2267 -0.0289 0.2633 -0.0055 -0.0264 0.0320 0.3139 0.0295 0.0074 -0.0470 0.0470 0.0581 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 ? 1 1 A A 99 . . . . ? 'X-RAY DIFFRACTION' 2 ? 2 2 B B 99 . . . . ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 3 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 4 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 MAR345 CCD ? ? ? ? 'data collection' ? ? ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 SHELXCD . ? ? ? ? phasing ? ? ? 8 autoSHARP . ? ? ? ? phasing ? ? ? 9 # _pdbx_entry_details.entry_id 3FMB _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A TYR -3 ? CG ? A TYR 16 CG 2 1 Y 1 A TYR -3 ? CD1 ? A TYR 16 CD1 3 1 Y 1 A TYR -3 ? CD2 ? A TYR 16 CD2 4 1 Y 1 A TYR -3 ? CE1 ? A TYR 16 CE1 5 1 Y 1 A TYR -3 ? CE2 ? A TYR 16 CE2 6 1 Y 1 A TYR -3 ? CZ ? A TYR 16 CZ 7 1 Y 1 A TYR -3 ? OH ? A TYR 16 OH 8 1 Y 1 B TYR -3 ? CG ? B TYR 16 CG 9 1 Y 1 B TYR -3 ? CD1 ? B TYR 16 CD1 10 1 Y 1 B TYR -3 ? CD2 ? B TYR 16 CD2 11 1 Y 1 B TYR -3 ? CE1 ? B TYR 16 CE1 12 1 Y 1 B TYR -3 ? CE2 ? B TYR 16 CE2 13 1 Y 1 B TYR -3 ? CZ ? B TYR 16 CZ 14 1 Y 1 B TYR -3 ? OH ? B TYR 16 OH # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -18 ? A MSE 1 2 1 Y 1 A GLY -17 ? A GLY 2 3 1 Y 1 A SER -16 ? A SER 3 4 1 Y 1 A ASP -15 ? A ASP 4 5 1 Y 1 A LYS -14 ? A LYS 5 6 1 Y 1 A ILE -13 ? A ILE 6 7 1 Y 1 A HIS -12 ? A HIS 7 8 1 Y 1 A HIS -11 ? A HIS 8 9 1 Y 1 A HIS -10 ? A HIS 9 10 1 Y 1 A HIS -9 ? A HIS 10 11 1 Y 1 A HIS -8 ? A HIS 11 12 1 Y 1 A HIS -7 ? A HIS 12 13 1 Y 1 A GLU -6 ? A GLU 13 14 1 Y 1 A ASN -5 ? A ASN 14 15 1 Y 1 A LEU -4 ? A LEU 15 16 1 Y 1 B MSE -18 ? B MSE 1 17 1 Y 1 B GLY -17 ? B GLY 2 18 1 Y 1 B SER -16 ? B SER 3 19 1 Y 1 B ASP -15 ? B ASP 4 20 1 Y 1 B LYS -14 ? B LYS 5 21 1 Y 1 B ILE -13 ? B ILE 6 22 1 Y 1 B HIS -12 ? B HIS 7 23 1 Y 1 B HIS -11 ? B HIS 8 24 1 Y 1 B HIS -10 ? B HIS 9 25 1 Y 1 B HIS -9 ? B HIS 10 26 1 Y 1 B HIS -8 ? B HIS 11 27 1 Y 1 B HIS -7 ? B HIS 12 28 1 Y 1 B GLU -6 ? B GLU 13 29 1 Y 1 B ASN -5 ? B ASN 14 30 1 Y 1 B LEU -4 ? B LEU 15 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 1,2-ETHANEDIOL EDO 4 water HOH #