HEADER ONCOPROTEIN/HYDROLASE 22-DEC-08 3FMO TITLE CRYSTAL STRUCTURE OF THE NUCLEOPORIN NUP214 IN COMPLEX WITH THE DEAD- TITLE 2 BOX HELICASE DDX19 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEAR PORE COMPLEX PROTEIN NUP214; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: NUCLEOPORIN NUP214, 214 KDA NUCLEOPORIN, PROTEIN CAN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: ATP-DEPENDENT RNA HELICASE DDX19B; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: DEAD BOX PROTEIN 19B, DEAD BOX RNA HELICASE DEAD5; COMPND 10 EC: 3.6.1.-; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NUP214, CAIN, CAN, KIAA0023; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: DDX19B, DBP5, DDX19; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NUCLEAR PORIN, NUCLEAR PORE COMPLEX, NUCLEOCYTOPLASMIC TRANSPORT, KEYWDS 2 MRNA EXPORT, PROTEIN INTERACTION, HELICASE, BETA-PROPELLER, DEAD KEYWDS 3 BOX, GLYCOPROTEIN, MRNA TRANSPORT, NUCLEUS, PHOSPHOPROTEIN, PROTEIN KEYWDS 4 TRANSPORT, PROTO-ONCOGENE, TRANSLOCATION, TRANSPORT, ATP-BINDING, KEYWDS 5 HYDROLASE, MEMBRANE, NUCLEOTIDE-BINDING, RNA-BINDING, PROTEIN KEYWDS 6 TRANSPORT-HYDROLASE COMPLEX, ONCOPROTEIN-HYDROLASE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.NAPETSCHNIG,E.W.DEBLER,G.BLOBEL,A.HOELZ REVDAT 4 06-SEP-23 3FMO 1 REMARK REVDAT 3 01-NOV-17 3FMO 1 REMARK REVDAT 2 13-JUL-11 3FMO 1 VERSN REVDAT 1 19-MAY-09 3FMO 0 JRNL AUTH J.NAPETSCHNIG,S.A.KASSUBE,E.W.DEBLER,R.W.WONG,G.BLOBEL, JRNL AUTH 2 A.HOELZ JRNL TITL STRUCTURAL AND FUNCTIONAL ANALYSIS OF THE INTERACTION JRNL TITL 2 BETWEEN THE NUCLEOPORIN NUP214 AND THE DEAD-BOX HELICASE JRNL TITL 3 DDX19. JRNL REF PROC.NATL.ACAD.SCI.USA V. 106 3089 2009 JRNL REFN ISSN 0027-8424 JRNL PMID 19208808 JRNL DOI 10.1073/PNAS.0813267106 REMARK 2 REMARK 2 RESOLUTION. 2.51 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.51 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.79 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 91.3 REMARK 3 NUMBER OF REFLECTIONS : 29350 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1528 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.51 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1439 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 78.64 REMARK 3 BIN R VALUE (WORKING SET) : 0.3210 REMARK 3 BIN FREE R VALUE SET COUNT : 89 REMARK 3 BIN FREE R VALUE : 0.3770 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5118 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 33 REMARK 3 SOLVENT ATOMS : 32 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 8.82000 REMARK 3 B22 (A**2) : -3.51000 REMARK 3 B33 (A**2) : -5.31000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.406 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.267 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.200 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 20.314 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.934 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5265 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3590 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7156 ; 1.492 ; 1.992 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8854 ; 0.872 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 651 ; 6.998 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 214 ;39.539 ;25.280 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 936 ;18.743 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;18.652 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 818 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5712 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 943 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 995 ; 0.215 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 3623 ; 0.202 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2526 ; 0.187 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 3044 ; 0.093 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 128 ; 0.140 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 15 ; 0.164 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 25 ; 0.265 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.214 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4166 ; 0.902 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1288 ; 0.111 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5349 ; 1.066 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2309 ; 1.367 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1807 ; 2.029 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 9 A 428 REMARK 3 ORIGIN FOR THE GROUP (A): 24.2764 3.3931 6.5871 REMARK 3 T TENSOR REMARK 3 T11: -0.1515 T22: -0.0947 REMARK 3 T33: -0.0846 T12: 0.0331 REMARK 3 T13: 0.0339 T23: 0.0256 REMARK 3 L TENSOR REMARK 3 L11: 1.2685 L22: 1.4607 REMARK 3 L33: 2.2812 L12: -0.0895 REMARK 3 L13: 0.5551 L23: -0.4521 REMARK 3 S TENSOR REMARK 3 S11: 0.0103 S12: -0.0553 S13: 0.0161 REMARK 3 S21: -0.2448 S22: -0.0198 S23: 0.0491 REMARK 3 S31: 0.2471 S32: 0.0996 S33: 0.0095 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 69 B 300 REMARK 3 ORIGIN FOR THE GROUP (A): 32.7608 -13.4129 43.8545 REMARK 3 T TENSOR REMARK 3 T11: -0.2355 T22: -0.0252 REMARK 3 T33: -0.0318 T12: -0.0033 REMARK 3 T13: -0.0029 T23: 0.0455 REMARK 3 L TENSOR REMARK 3 L11: 1.0299 L22: 2.1876 REMARK 3 L33: 3.0800 L12: -0.1208 REMARK 3 L13: 0.2707 L23: -0.6870 REMARK 3 S TENSOR REMARK 3 S11: 0.1449 S12: 0.0950 S13: 0.0354 REMARK 3 S21: 0.1310 S22: -0.0801 S23: -0.0229 REMARK 3 S31: 0.0269 S32: 0.1238 S33: -0.0648 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3FMO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-DEC-08. REMARK 100 THE DEPOSITION ID IS D_1000050778. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-DEC-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33892 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 13.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10500 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.9 REMARK 200 DATA REDUNDANCY IN SHELL : 10.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.68700 REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2OIT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM DI-HYDROGEN PHOSPHATE, DI REMARK 280 -POTASSIUM HYDROGEN PHOSPHATE, SODIUM ACETATE, PH 4.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.74200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.73050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 57.69600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 71.73050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.74200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 57.69600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CHAINS A,B REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 ASP A 3 REMARK 465 GLU A 4 REMARK 465 MET A 5 REMARK 465 ASP A 6 REMARK 465 ALA A 7 REMARK 465 LYS A 429 REMARK 465 SER A 430 REMARK 465 PRO A 431 REMARK 465 GLY A 432 REMARK 465 SER A 433 REMARK 465 THR A 434 REMARK 465 PRO A 435 REMARK 465 THR A 436 REMARK 465 THR A 437 REMARK 465 PRO A 438 REMARK 465 THR A 439 REMARK 465 SER A 440 REMARK 465 SER A 441 REMARK 465 GLN A 442 REMARK 465 ALA A 443 REMARK 465 PRO A 444 REMARK 465 GLN A 445 REMARK 465 LYS A 446 REMARK 465 LEU A 447 REMARK 465 ASP A 448 REMARK 465 ALA A 449 REMARK 465 SER A 450 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 THR B 3 REMARK 465 ASP B 4 REMARK 465 SER B 5 REMARK 465 TRP B 6 REMARK 465 ALA B 7 REMARK 465 LEU B 8 REMARK 465 ALA B 9 REMARK 465 VAL B 10 REMARK 465 ASP B 11 REMARK 465 GLU B 12 REMARK 465 GLN B 13 REMARK 465 GLU B 14 REMARK 465 ALA B 15 REMARK 465 ALA B 16 REMARK 465 ALA B 17 REMARK 465 GLU B 18 REMARK 465 SER B 19 REMARK 465 LEU B 20 REMARK 465 SER B 21 REMARK 465 ASN B 22 REMARK 465 LEU B 23 REMARK 465 HIS B 24 REMARK 465 LEU B 25 REMARK 465 LYS B 26 REMARK 465 GLU B 27 REMARK 465 GLU B 28 REMARK 465 LYS B 29 REMARK 465 ILE B 30 REMARK 465 LYS B 31 REMARK 465 PRO B 32 REMARK 465 ASP B 33 REMARK 465 THR B 34 REMARK 465 ASN B 35 REMARK 465 GLY B 36 REMARK 465 ALA B 37 REMARK 465 VAL B 38 REMARK 465 VAL B 39 REMARK 465 LYS B 40 REMARK 465 THR B 41 REMARK 465 ASN B 42 REMARK 465 ALA B 43 REMARK 465 ASN B 44 REMARK 465 ALA B 45 REMARK 465 GLU B 46 REMARK 465 LYS B 47 REMARK 465 THR B 48 REMARK 465 ASP B 49 REMARK 465 GLU B 50 REMARK 465 GLU B 51 REMARK 465 GLU B 52 REMARK 465 LYS B 53 REMARK 465 GLU B 54 REMARK 465 ASP B 55 REMARK 465 ARG B 56 REMARK 465 ALA B 57 REMARK 465 ALA B 58 REMARK 465 GLN B 59 REMARK 465 SER B 60 REMARK 465 LEU B 61 REMARK 465 LEU B 62 REMARK 465 ASN B 63 REMARK 465 LYS B 64 REMARK 465 LEU B 65 REMARK 465 ILE B 66 REMARK 465 ARG B 67 REMARK 465 SER B 68 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 12 119.20 -162.89 REMARK 500 ASP A 147 -89.72 -104.31 REMARK 500 THR A 180 -107.58 -116.79 REMARK 500 ALA A 194 50.36 72.08 REMARK 500 THR A 264 139.69 -37.41 REMARK 500 MET A 291 -112.27 71.01 REMARK 500 GLU A 292 75.80 -114.15 REMARK 500 HIS A 304 118.24 -173.56 REMARK 500 ASP A 334 -45.11 -21.83 REMARK 500 GLN A 335 -6.48 79.97 REMARK 500 ILE A 377 -74.18 -88.94 REMARK 500 SER B 86 55.43 -145.41 REMARK 500 LEU B 88 74.74 -153.65 REMARK 500 SER B 90 97.57 47.92 REMARK 500 ASN B 113 -62.94 -123.14 REMARK 500 ALA B 128 163.68 -47.69 REMARK 500 LYS B 187 -35.02 -34.99 REMARK 500 SER B 226 -102.49 -135.70 REMARK 500 LYS B 227 -68.36 -19.92 REMARK 500 ALA B 244 -52.54 -28.25 REMARK 500 PHE B 277 52.35 -165.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 451 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3FMP RELATED DB: PDB DBREF 3FMO A 1 450 UNP P35658 NU214_HUMAN 1 450 DBREF 3FMO B 1 300 UNP Q9UMR2 DD19B_HUMAN 1 300 SEQRES 1 A 450 MET GLY ASP GLU MET ASP ALA MET ILE PRO GLU ARG GLU SEQRES 2 A 450 MET LYS ASP PHE GLN PHE ARG ALA LEU LYS LYS VAL ARG SEQRES 3 A 450 ILE PHE ASP SER PRO GLU GLU LEU PRO LYS GLU ARG SER SEQRES 4 A 450 SER LEU LEU ALA VAL SER ASN LYS TYR GLY LEU VAL PHE SEQRES 5 A 450 ALA GLY GLY ALA SER GLY LEU GLN ILE PHE PRO THR LYS SEQRES 6 A 450 ASN LEU LEU ILE GLN ASN LYS PRO GLY ASP ASP PRO ASN SEQRES 7 A 450 LYS ILE VAL ASP LYS VAL GLN GLY LEU LEU VAL PRO MET SEQRES 8 A 450 LYS PHE PRO ILE HIS HIS LEU ALA LEU SER CYS ASP ASN SEQRES 9 A 450 LEU THR LEU SER ALA CYS MET MET SER SER GLU TYR GLY SEQRES 10 A 450 SER ILE ILE ALA PHE PHE ASP VAL ARG THR PHE SER ASN SEQRES 11 A 450 GLU ALA LYS GLN GLN LYS ARG PRO PHE ALA TYR HIS LYS SEQRES 12 A 450 LEU LEU LYS ASP ALA GLY GLY MET VAL ILE ASP MET LYS SEQRES 13 A 450 TRP ASN PRO THR VAL PRO SER MET VAL ALA VAL CYS LEU SEQRES 14 A 450 ALA ASP GLY SER ILE ALA VAL LEU GLN VAL THR GLU THR SEQRES 15 A 450 VAL LYS VAL CYS ALA THR LEU PRO SER THR VAL ALA VAL SEQRES 16 A 450 THR SER VAL CYS TRP SER PRO LYS GLY LYS GLN LEU ALA SEQRES 17 A 450 VAL GLY LYS GLN ASN GLY THR VAL VAL GLN TYR LEU PRO SEQRES 18 A 450 THR LEU GLN GLU LYS LYS VAL ILE PRO CYS PRO PRO PHE SEQRES 19 A 450 TYR GLU SER ASP HIS PRO VAL ARG VAL LEU ASP VAL LEU SEQRES 20 A 450 TRP ILE GLY THR TYR VAL PHE ALA ILE VAL TYR ALA ALA SEQRES 21 A 450 ALA ASP GLY THR LEU GLU THR SER PRO ASP VAL VAL MET SEQRES 22 A 450 ALA LEU LEU PRO LYS LYS GLU GLU LYS HIS PRO GLU ILE SEQRES 23 A 450 PHE VAL ASN PHE MET GLU PRO CYS TYR GLY SER CYS THR SEQRES 24 A 450 GLU ARG GLN HIS HIS TYR TYR LEU SER TYR ILE GLU GLU SEQRES 25 A 450 TRP ASP LEU VAL LEU ALA ALA SER ALA ALA SER THR GLU SEQRES 26 A 450 VAL SER ILE LEU ALA ARG GLN SER ASP GLN ILE ASN TRP SEQRES 27 A 450 GLU SER TRP LEU LEU GLU ASP SER SER ARG ALA GLU LEU SEQRES 28 A 450 PRO VAL THR ASP LYS SER ASP ASP SER LEU PRO MET GLY SEQRES 29 A 450 VAL VAL VAL ASP TYR THR ASN GLN VAL GLU ILE THR ILE SEQRES 30 A 450 SER ASP GLU LYS THR LEU PRO PRO ALA PRO VAL LEU MET SEQRES 31 A 450 LEU LEU SER THR ASP GLY VAL LEU CYS PRO PHE TYR MET SEQRES 32 A 450 ILE ASN GLN ASN PRO GLY VAL LYS SER LEU ILE LYS THR SEQRES 33 A 450 PRO GLU ARG LEU SER LEU GLU GLY GLU ARG GLN PRO LYS SEQRES 34 A 450 SER PRO GLY SER THR PRO THR THR PRO THR SER SER GLN SEQRES 35 A 450 ALA PRO GLN LYS LEU ASP ALA SER SEQRES 1 B 300 MET ALA THR ASP SER TRP ALA LEU ALA VAL ASP GLU GLN SEQRES 2 B 300 GLU ALA ALA ALA GLU SER LEU SER ASN LEU HIS LEU LYS SEQRES 3 B 300 GLU GLU LYS ILE LYS PRO ASP THR ASN GLY ALA VAL VAL SEQRES 4 B 300 LYS THR ASN ALA ASN ALA GLU LYS THR ASP GLU GLU GLU SEQRES 5 B 300 LYS GLU ASP ARG ALA ALA GLN SER LEU LEU ASN LYS LEU SEQRES 6 B 300 ILE ARG SER ASN LEU VAL ASP ASN THR ASN GLN VAL GLU SEQRES 7 B 300 VAL LEU GLN ARG ASP PRO ASN SER PRO LEU TYR SER VAL SEQRES 8 B 300 LYS SER PHE GLU GLU LEU ARG LEU LYS PRO GLN LEU LEU SEQRES 9 B 300 GLN GLY VAL TYR ALA MET GLY PHE ASN ARG PRO SER LYS SEQRES 10 B 300 ILE GLN GLU ASN ALA LEU PRO LEU MET LEU ALA GLU PRO SEQRES 11 B 300 PRO GLN ASN LEU ILE ALA GLN SER GLN SER GLY THR GLY SEQRES 12 B 300 LYS THR ALA ALA PHE VAL LEU ALA MET LEU SER GLN VAL SEQRES 13 B 300 GLU PRO ALA ASN LYS TYR PRO GLN CYS LEU CYS LEU SER SEQRES 14 B 300 PRO THR TYR GLU LEU ALA LEU GLN THR GLY LYS VAL ILE SEQRES 15 B 300 GLU GLN MET GLY LYS PHE TYR PRO GLU LEU LYS LEU ALA SEQRES 16 B 300 TYR ALA VAL ARG GLY ASN LYS LEU GLU ARG GLY GLN LYS SEQRES 17 B 300 ILE SER GLU GLN ILE VAL ILE GLY THR PRO GLY THR VAL SEQRES 18 B 300 LEU ASP TRP CYS SER LYS LEU LYS PHE ILE ASP PRO LYS SEQRES 19 B 300 LYS ILE LYS VAL PHE VAL LEU ASP GLU ALA ASP VAL MET SEQRES 20 B 300 ILE ALA THR GLN GLY HIS GLN ASP GLN SER ILE ARG ILE SEQRES 21 B 300 GLN ARG MET LEU PRO ARG ASN CYS GLN MET LEU LEU PHE SEQRES 22 B 300 SER ALA THR PHE GLU ASP SER VAL TRP LYS PHE ALA GLN SEQRES 23 B 300 LYS VAL VAL PRO ASP PRO ASN VAL ILE LYS LEU LYS ARG SEQRES 24 B 300 GLU HET GOL A 451 6 HET ADP B 301 27 HETNAM GOL GLYCEROL HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL C3 H8 O3 FORMUL 4 ADP C10 H15 N5 O10 P2 FORMUL 5 HOH *32(H2 O) HELIX 1 1 THR A 64 LEU A 68 1 5 HELIX 2 2 VAL A 125 ASN A 130 1 6 HELIX 3 3 ASP A 147 GLY A 150 5 4 HELIX 4 4 PRO A 190 VAL A 193 5 4 HELIX 5 5 GLU A 311 TRP A 313 5 3 HELIX 6 6 PHE B 94 ARG B 98 5 5 HELIX 7 7 LYS B 100 MET B 110 1 11 HELIX 8 8 SER B 116 LEU B 127 1 12 HELIX 9 9 GLY B 143 VAL B 156 1 14 HELIX 10 10 THR B 171 GLY B 186 1 16 HELIX 11 11 THR B 217 SER B 226 1 10 HELIX 12 12 ASP B 232 ILE B 236 5 5 HELIX 13 13 GLU B 243 THR B 250 1 8 HELIX 14 14 GLY B 252 ARG B 262 1 11 HELIX 15 15 GLU B 278 VAL B 289 1 12 SHEET 1 A 5 GLU A 11 GLU A 13 0 SHEET 2 A 5 TRP A 338 LEU A 342 1 O LEU A 342 N ARG A 12 SHEET 3 A 5 SER A 327 ARG A 331 -1 N ALA A 330 O GLU A 339 SHEET 4 A 5 LEU A 315 SER A 320 -1 N VAL A 316 O LEU A 329 SHEET 5 A 5 TYR A 305 ILE A 310 -1 N SER A 308 O LEU A 317 SHEET 1 B 3 PHE A 17 ALA A 21 0 SHEET 2 B 3 VAL A 397 ASN A 405 -1 O TYR A 402 N ARG A 20 SHEET 3 B 3 VAL A 25 ARG A 26 -1 N VAL A 25 O LEU A 398 SHEET 1 C 4 PHE A 17 ALA A 21 0 SHEET 2 C 4 VAL A 397 ASN A 405 -1 O TYR A 402 N ARG A 20 SHEET 3 C 4 VAL A 388 SER A 393 -1 N LEU A 389 O PHE A 401 SHEET 4 C 4 PRO A 362 ASP A 368 -1 N MET A 363 O LEU A 392 SHEET 1 D 4 LEU A 42 SER A 45 0 SHEET 2 D 4 LEU A 50 GLY A 55 -1 O PHE A 52 N ALA A 43 SHEET 3 D 4 GLY A 58 PRO A 63 -1 O GLN A 60 N ALA A 53 SHEET 4 D 4 LEU A 87 VAL A 89 -1 O VAL A 89 N LEU A 59 SHEET 1 E 4 ILE A 95 LEU A 100 0 SHEET 2 E 4 THR A 106 SER A 113 -1 O CYS A 110 N HIS A 97 SHEET 3 E 4 GLY A 117 ASP A 124 -1 O PHE A 123 N LEU A 107 SHEET 4 E 4 ALA A 140 LEU A 144 -1 O HIS A 142 N ILE A 120 SHEET 1 F 4 VAL A 152 TRP A 157 0 SHEET 2 F 4 MET A 164 LEU A 169 -1 O CYS A 168 N ASP A 154 SHEET 3 F 4 ILE A 174 VAL A 179 -1 O LEU A 177 N VAL A 165 SHEET 4 F 4 VAL A 183 LEU A 189 -1 O LYS A 184 N GLN A 178 SHEET 1 G 4 VAL A 195 TRP A 200 0 SHEET 2 G 4 LEU A 207 LYS A 211 -1 O ALA A 208 N CYS A 199 SHEET 3 G 4 VAL A 216 TYR A 219 -1 O TYR A 219 N LEU A 207 SHEET 4 G 4 GLU A 225 ILE A 229 -1 O LYS A 227 N GLN A 218 SHEET 1 H 4 VAL A 241 GLY A 250 0 SHEET 2 H 4 VAL A 253 ALA A 260 -1 O VAL A 257 N LEU A 244 SHEET 3 H 4 ASP A 270 LEU A 275 -1 O VAL A 272 N ILE A 256 SHEET 4 H 4 ILE A 286 MET A 291 -1 O ILE A 286 N LEU A 275 SHEET 1 I 2 ILE A 375 THR A 376 0 SHEET 2 I 2 THR A 382 LEU A 383 -1 O LEU A 383 N ILE A 375 SHEET 1 J 8 VAL B 77 LEU B 80 0 SHEET 2 J 8 ASN B 293 LEU B 297 -1 O LYS B 296 N GLU B 78 SHEET 3 J 8 LEU B 134 GLN B 137 1 N ILE B 135 O ILE B 295 SHEET 4 J 8 GLN B 269 SER B 274 1 O LEU B 272 N ALA B 136 SHEET 5 J 8 VAL B 238 LEU B 241 1 N PHE B 239 O GLN B 269 SHEET 6 J 8 CYS B 165 LEU B 168 1 N LEU B 168 O VAL B 240 SHEET 7 J 8 ILE B 213 GLY B 216 1 O VAL B 214 N CYS B 165 SHEET 8 J 8 LEU B 194 ALA B 197 1 N ALA B 197 O ILE B 215 CISPEP 1 GLU B 129 PRO B 130 0 -2.50 SITE 1 AC1 14 ASN B 69 LEU B 70 PHE B 94 PHE B 112 SITE 2 AC1 14 ARG B 114 SER B 116 GLN B 119 GLN B 139 SITE 3 AC1 14 GLY B 141 THR B 142 GLY B 143 LYS B 144 SITE 4 AC1 14 THR B 145 ALA B 146 SITE 1 AC2 4 LEU A 50 ILE A 61 PHE A 128 SER A 129 CRYST1 59.484 115.392 143.461 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016811 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008666 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006971 0.00000