HEADER IMMUNE SYSTEM 22-DEC-08 3FN0 TITLE CRYSTAL STRUCTURE OF HIV-1 NEUTRALIZING HUMAN FAB Z13E1 IN COMPLEX TITLE 2 WITH A 12-RESIDUE PEPTIDE CONTAINING THE Z13E1 EPITOPE ON GP41 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FAB Z13E1; COMPND 3 CHAIN: L; COMPND 4 FRAGMENT: LIGHT CHAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: FAB Z13E1; COMPND 8 CHAIN: H; COMPND 9 FRAGMENT: HEAVY CHAIN; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: ENVELOPE POLYPROTEIN GP160; COMPND 13 CHAIN: P; COMPND 14 FRAGMENT: TRANSMEMBRANE GLYCOPROTEIN; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES KEYWDS Z13E1, Z13, HIV, ENV, GP41, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR R.PEJCHAL,I.A.WILSON,M.B.ZWICK REVDAT 3 06-SEP-23 3FN0 1 REMARK REVDAT 2 25-AUG-09 3FN0 1 JRNL REVDAT 1 23-JUN-09 3FN0 0 JRNL AUTH R.PEJCHAL,J.S.GACH,F.M.BRUNEL,R.M.CARDOSO,R.L.STANFIELD, JRNL AUTH 2 P.E.DAWSON,D.R.BURTON,M.B.ZWICK,I.A.WILSON JRNL TITL A CONFORMATIONAL SWITCH IN HUMAN IMMUNODEFICIENCY VIRUS GP41 JRNL TITL 2 REVEALED BY THE STRUCTURES OF OVERLAPPING EPITOPES JRNL TITL 3 RECOGNIZED BY NEUTRALIZING ANTIBODIES. JRNL REF J.VIROL. V. 83 8451 2009 JRNL REFN ISSN 0022-538X JRNL PMID 19515770 JRNL DOI 10.1128/JVI.00685-09 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.66 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 48152 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2408 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.6638 - 4.6229 0.98 2854 151 0.1558 0.1924 REMARK 3 2 4.6229 - 3.6715 1.00 2768 146 0.1596 0.1994 REMARK 3 3 3.6715 - 3.2080 1.00 2749 144 0.2020 0.2569 REMARK 3 4 3.2080 - 2.9150 1.00 2694 142 0.2184 0.2612 REMARK 3 5 2.9150 - 2.7062 1.00 2709 143 0.2213 0.2630 REMARK 3 6 2.7062 - 2.5467 1.00 2671 140 0.2177 0.2704 REMARK 3 7 2.5467 - 2.4193 1.00 2705 143 0.2090 0.2740 REMARK 3 8 2.4193 - 2.3140 1.00 2669 140 0.2097 0.2436 REMARK 3 9 2.3140 - 2.2249 1.00 2665 140 0.2174 0.2300 REMARK 3 10 2.2249 - 2.1482 1.00 2690 142 0.2268 0.2902 REMARK 3 11 2.1482 - 2.0810 1.00 2649 139 0.2455 0.2882 REMARK 3 12 2.0810 - 2.0216 1.00 2650 140 0.2441 0.2868 REMARK 3 13 2.0216 - 1.9684 1.00 2672 140 0.2583 0.3289 REMARK 3 14 1.9684 - 1.9203 1.00 2643 140 0.2704 0.2985 REMARK 3 15 1.9203 - 1.8767 1.00 2658 139 0.2607 0.3396 REMARK 3 16 1.8767 - 1.8368 1.00 2644 140 0.2696 0.2924 REMARK 3 17 1.8368 - 1.8000 1.00 2654 139 0.2878 0.3371 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 52.45 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.040 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.88970 REMARK 3 B22 (A**2) : -1.88970 REMARK 3 B33 (A**2) : 3.77950 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.016 NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN L AND RESID 3:108 REMARK 3 ORIGIN FOR THE GROUP (A): 40.0542 22.8262 49.1780 REMARK 3 T TENSOR REMARK 3 T11: 0.2697 T22: 0.1609 REMARK 3 T33: 0.3194 T12: -0.0685 REMARK 3 T13: 0.0776 T23: -0.0840 REMARK 3 L TENSOR REMARK 3 L11: 4.4326 L22: 1.0042 REMARK 3 L33: 2.2195 L12: 0.7271 REMARK 3 L13: -2.3821 L23: 0.7204 REMARK 3 S TENSOR REMARK 3 S11: -0.5735 S12: 0.2662 S13: -0.7883 REMARK 3 S21: 0.1032 S22: 0.3154 S23: -0.2935 REMARK 3 S31: 0.5064 S32: -0.0524 S33: 0.2454 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN L AND RESID 109:211 REMARK 3 ORIGIN FOR THE GROUP (A): 18.6521 43.9340 68.0509 REMARK 3 T TENSOR REMARK 3 T11: 0.1955 T22: 0.1528 REMARK 3 T33: 0.2865 T12: -0.0001 REMARK 3 T13: -0.0210 T23: 0.0675 REMARK 3 L TENSOR REMARK 3 L11: 1.0395 L22: 0.5820 REMARK 3 L33: 2.4421 L12: 0.6470 REMARK 3 L13: -1.0763 L23: 0.5106 REMARK 3 S TENSOR REMARK 3 S11: -0.0346 S12: 0.2022 S13: 0.3534 REMARK 3 S21: -0.0008 S22: 0.1776 S23: 0.2657 REMARK 3 S31: -0.0793 S32: -0.2448 S33: -0.1719 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN H AND RESID 1:113 REMARK 3 ORIGIN FOR THE GROUP (A): 56.0783 37.6225 53.1092 REMARK 3 T TENSOR REMARK 3 T11: 0.0830 T22: 0.4320 REMARK 3 T33: 0.2580 T12: -0.0049 REMARK 3 T13: -0.0272 T23: -0.1411 REMARK 3 L TENSOR REMARK 3 L11: 4.4839 L22: 0.6386 REMARK 3 L33: 3.2860 L12: 0.5298 REMARK 3 L13: -3.4803 L23: 0.1154 REMARK 3 S TENSOR REMARK 3 S11: 0.0257 S12: -0.9255 S13: -0.0397 REMARK 3 S21: 0.0227 S22: 0.1251 S23: -0.2254 REMARK 3 S31: 0.0344 S32: 0.9064 S33: -0.1502 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN H AND RESID 114:227 REMARK 3 ORIGIN FOR THE GROUP (A): 31.0646 42.1125 78.4110 REMARK 3 T TENSOR REMARK 3 T11: 0.1822 T22: 0.3135 REMARK 3 T33: 0.1560 T12: 0.0687 REMARK 3 T13: -0.0337 T23: -0.0820 REMARK 3 L TENSOR REMARK 3 L11: 2.5201 L22: 3.0973 REMARK 3 L33: 3.1516 L12: -0.4511 REMARK 3 L13: -0.8487 L23: 1.5636 REMARK 3 S TENSOR REMARK 3 S11: -0.1598 S12: -0.6784 S13: 0.2682 REMARK 3 S21: 0.2566 S22: 0.5536 S23: -0.1277 REMARK 3 S31: 0.2241 S32: 0.4809 S33: -0.2888 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN P AND RESID 670:678 REMARK 3 ORIGIN FOR THE GROUP (A): 65.0371 31.2751 39.9106 REMARK 3 T TENSOR REMARK 3 T11: 0.1656 T22: 0.4014 REMARK 3 T33: 0.4174 T12: 0.0456 REMARK 3 T13: 0.0133 T23: -0.1501 REMARK 3 L TENSOR REMARK 3 L11: -4.8409 L22: 0.6211 REMARK 3 L33: 7.8520 L12: 1.8440 REMARK 3 L13: -6.1033 L23: 1.3777 REMARK 3 S TENSOR REMARK 3 S11: -0.2637 S12: -0.4132 S13: -0.3872 REMARK 3 S21: -0.4439 S22: 0.2483 S23: -0.1403 REMARK 3 S31: 0.1839 S32: 0.7583 S33: -0.1378 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3FN0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JAN-09. REMARK 100 THE DEPOSITION ID IS D_1000050790. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAY-08 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99996 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48156 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 29.700 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 14.30 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04700 REMARK 200 FOR THE DATA SET : 33.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.48100 REMARK 200 FOR SHELL : 6.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: EPMR REMARK 200 STARTING MODEL: PDB ENTRY 2NXY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 21% PEG 3350, 0.2M POTASSIUM FLUORIDE, REMARK 280 0.1M SODIUM CHLORIDE, 10MM TRIS-CL, PH 8.0, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.41500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 53.47000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 53.47000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 22.20750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 53.47000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 53.47000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 66.62250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 53.47000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 53.47000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 22.20750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 53.47000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 53.47000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 66.62250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 44.41500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH L 340 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY L 212 REMARK 465 GLU L 213 REMARK 465 CYS L 214 REMARK 465 SER H 0 REMARK 465 SER H 130 REMARK 465 THR H 131 REMARK 465 SER H 132 REMARK 465 GLY H 133 REMARK 465 LYS H 228 REMARK 465 SER H 229 REMARK 465 CYS H 230 REMARK 465 ASP H 231 REMARK 465 LYS H 232 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN L 27 CG CD OE1 NE2 REMARK 470 ARG L 31 CG CD NE CZ NH1 NH2 REMARK 470 THR L 56 OG1 CG2 REMARK 470 LYS L 126 CG CD CE NZ REMARK 470 LYS L 169 CG CD CE NZ REMARK 470 LYS L 190 CG CD CE NZ REMARK 470 GLU H 1 CG CD OE1 OE2 REMARK 470 LEU H 5 CG CD1 CD2 REMARK 470 LYS H 13 CG CD CE NZ REMARK 470 SER H 65 OG REMARK 470 LYS H 75 CG CD CE NZ REMARK 470 ASN H 76 CG OD1 ND2 REMARK 470 ARG H 81 CG CD NE CZ NH1 NH2 REMARK 470 VAL H 99 CG1 CG2 REMARK 470 SER H 100 OG REMARK 470 PHE H 100B CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU H 100C CG CD1 CD2 REMARK 470 LYS H 129 CG CD CE NZ REMARK 470 ASN H 216 CG OD1 ND2 REMARK 470 LYS P 678 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O SER H 112 O HOH H 282 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN L 32 39.16 -87.40 REMARK 500 LEU L 47 -54.28 -120.45 REMARK 500 ALA L 51 -45.26 76.91 REMARK 500 ALA L 84 -177.56 -171.51 REMARK 500 ARG L 91 -154.13 56.58 REMARK 500 LEU L 92 65.82 -116.68 REMARK 500 ASP L 151 45.17 38.93 REMARK 500 ASN L 152 -4.83 77.33 REMARK 500 SER H 15 -10.96 89.00 REMARK 500 ALA H 88 165.97 177.99 REMARK 500 REMARK 500 REMARK: NULL DBREF 3FN0 L 3 214 PDB 3FN0 3FN0 3 214 DBREF 3FN0 H 0 232 PDB 3FN0 3FN0 0 232 DBREF 3FN0 P 670 678 PDB 3FN0 3FN0 670 678 SEQRES 1 L 212 GLU LEU THR GLN SER PRO ALA THR LEU SER LEU SER PRO SEQRES 2 L 212 GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER GLN SER SEQRES 3 L 212 VAL GLY ARG ASN LEU GLY TRP TYR GLN GLN LYS PRO GLY SEQRES 4 L 212 GLN ALA PRO ARG LEU LEU ILE TYR ASP ALA SER ASN ARG SEQRES 5 L 212 ALA THR GLY ILE PRO ALA ARG PHE SER GLY SER GLY SER SEQRES 6 L 212 GLY THR ASP PHE THR LEU THR ILE SER SER LEU GLU PRO SEQRES 7 L 212 GLU ASP PHE ALA VAL TYR TYR CYS GLN ALA ARG LEU LEU SEQRES 8 L 212 LEU PRO GLN THR PHE GLY GLN GLY THR LYS VAL GLU ILE SEQRES 9 L 212 LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE PHE PRO SEQRES 10 L 212 PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SER VAL SEQRES 11 L 212 VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU ALA LYS SEQRES 12 L 212 VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER GLY ASN SEQRES 13 L 212 SER GLN GLU SER VAL THR GLU GLN ASP SER LYS ASP SER SEQRES 14 L 212 THR TYR SER LEU SER SER THR LEU THR LEU SER LYS ALA SEQRES 15 L 212 ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU VAL THR SEQRES 16 L 212 HIS GLN GLY LEU SER SER PRO VAL THR LYS SER PHE ASN SEQRES 17 L 212 ARG GLY GLU CYS SEQRES 1 H 231 SER GLU VAL GLN LEU LEU GLU SER GLY PRO GLY LEU LEU SEQRES 2 H 231 LYS PRO SER GLU THR LEU SER LEU THR CYS THR VAL SER SEQRES 3 H 231 GLY GLY SER MET ILE ASN TYR TYR TRP SER TRP ILE ARG SEQRES 4 H 231 GLN PRO PRO GLY GLU ARG PRO GLN TRP LEU GLY HIS ILE SEQRES 5 H 231 ILE TYR GLY GLY THR THR LYS TYR ASN PRO SER LEU GLU SEQRES 6 H 231 SER ARG ILE THR ILE SER ARG ASP ILE SER LYS ASN GLN SEQRES 7 H 231 PHE SER LEU ARG LEU ASN SER VAL THR ALA ALA ASP THR SEQRES 8 H 231 ALA ILE TYR TYR CYS ALA ARG VAL ALA ILE GLY VAL SER SEQRES 9 H 231 GLY PHE LEU ASN TYR TYR TYR TYR MET ASP VAL TRP GLY SEQRES 10 H 231 SER GLY THR ALA VAL THR VAL SER SER ALA SER THR LYS SEQRES 11 H 231 GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SER SEQRES 12 H 231 THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS SEQRES 13 H 231 ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER SEQRES 14 H 231 GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL SEQRES 15 H 231 LEU GLN SER SER GLY LEU TYR SER LEU SER SER VAL VAL SEQRES 16 H 231 THR VAL PRO SER SER SER LEU GLY THR GLN THR TYR ILE SEQRES 17 H 231 CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP SEQRES 18 H 231 LYS LYS VAL GLU PRO LYS SER CYS ASP LYS SEQRES 1 P 9 TRP ASN TRP PHE ASP ILE THR ASN LYS FORMUL 4 HOH *230(H2 O) HELIX 1 1 GLU L 79 PHE L 83 5 5 HELIX 2 2 SER L 121 SER L 127 1 7 HELIX 3 3 LYS L 183 GLU L 187 1 5 HELIX 4 4 THR H 83 THR H 87 5 5 HELIX 5 5 SER H 163 ALA H 165 5 3 HELIX 6 6 SER H 196 GLY H 199 5 4 HELIX 7 7 LYS H 213 ASN H 216 5 4 SHEET 1 A 4 LEU L 4 SER L 7 0 SHEET 2 A 4 ALA L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 A 4 ASP L 70 ILE L 75 -1 O LEU L 73 N LEU L 21 SHEET 4 A 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 B 6 THR L 10 LEU L 13 0 SHEET 2 B 6 THR L 102 ILE L 106 1 O GLU L 105 N LEU L 11 SHEET 3 B 6 VAL L 85 ALA L 90 -1 N TYR L 86 O THR L 102 SHEET 4 B 6 LEU L 33 GLN L 38 -1 N GLY L 34 O GLN L 89 SHEET 5 B 6 ARG L 45 TYR L 49 -1 O ILE L 48 N TRP L 35 SHEET 6 B 6 ASN L 53 ARG L 54 -1 O ASN L 53 N TYR L 49 SHEET 1 C 4 SER L 114 PHE L 118 0 SHEET 2 C 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 C 4 TYR L 173 SER L 182 -1 O LEU L 181 N ALA L 130 SHEET 4 C 4 SER L 159 VAL L 163 -1 N GLN L 160 O THR L 178 SHEET 1 D 4 ALA L 153 LEU L 154 0 SHEET 2 D 4 LYS L 145 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 D 4 VAL L 191 THR L 197 -1 O GLU L 195 N GLN L 147 SHEET 4 D 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SHEET 1 E 4 GLN H 3 SER H 7 0 SHEET 2 E 4 LEU H 18 SER H 25 -1 O SER H 25 N GLN H 3 SHEET 3 E 4 GLN H 77 LEU H 82 -1 O PHE H 78 N CYS H 22 SHEET 4 E 4 ILE H 67 ASP H 72 -1 N ASP H 72 O GLN H 77 SHEET 1 F 6 LEU H 11 LEU H 12 0 SHEET 2 F 6 THR H 107 VAL H 111 1 O THR H 110 N LEU H 12 SHEET 3 F 6 ALA H 88 VAL H 99 -1 N ALA H 88 O VAL H 109 SHEET 4 F 6 TYR H 33 GLN H 39 -1 N ILE H 37 O TYR H 91 SHEET 5 F 6 GLN H 46 ILE H 51 -1 O GLN H 46 N ARG H 38 SHEET 6 F 6 THR H 57 TYR H 59 -1 O LYS H 58 N HIS H 50 SHEET 1 G 4 LEU H 11 LEU H 12 0 SHEET 2 G 4 THR H 107 VAL H 111 1 O THR H 110 N LEU H 12 SHEET 3 G 4 ALA H 88 VAL H 99 -1 N ALA H 88 O VAL H 109 SHEET 4 G 4 TYR H 100E TRP H 103 -1 O VAL H 102 N ARG H 94 SHEET 1 H 4 SER H 120 LEU H 124 0 SHEET 2 H 4 THR H 135 TYR H 147 -1 O LEU H 143 N PHE H 122 SHEET 3 H 4 TYR H 185 PRO H 194 -1 O VAL H 193 N ALA H 136 SHEET 4 H 4 VAL H 171 THR H 173 -1 N HIS H 172 O VAL H 190 SHEET 1 I 4 SER H 120 LEU H 124 0 SHEET 2 I 4 THR H 135 TYR H 147 -1 O LEU H 143 N PHE H 122 SHEET 3 I 4 TYR H 185 PRO H 194 -1 O VAL H 193 N ALA H 136 SHEET 4 I 4 VAL H 177 LEU H 178 -1 N VAL H 177 O SER H 186 SHEET 1 J 3 THR H 153 TRP H 157 0 SHEET 2 J 3 ILE H 207 HIS H 212 -1 O ASN H 209 N SER H 156 SHEET 3 J 3 THR H 217 LYS H 222 -1 O VAL H 219 N VAL H 210 SSBOND 1 CYS L 23 CYS L 88 1555 1555 2.09 SSBOND 2 CYS L 134 CYS L 194 1555 1555 2.07 SSBOND 3 CYS H 22 CYS H 92 1555 1555 2.13 SSBOND 4 CYS H 142 CYS H 208 1555 1555 2.08 CISPEP 1 SER L 7 PRO L 8 0 -6.58 CISPEP 2 LEU L 94 PRO L 95 0 8.86 CISPEP 3 TYR L 140 PRO L 141 0 7.46 CISPEP 4 PHE H 148 PRO H 149 0 -7.75 CISPEP 5 GLU H 150 PRO H 151 0 4.97 CRYST1 106.940 106.940 88.830 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009351 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009351 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011257 0.00000