HEADER TRANSFERASE 26-DEC-08 3FNR TITLE CRYSTAL STRUCTURE OF PUTATIVE ARGINYL T-RNA SYNTHETASE FROM TITLE 2 CAMPYLOBACTER JEJUNI; COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARGINYL-TRNA SYNTHETASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ARGININE--TRNA LIGASE, ARGRS; COMPND 5 EC: 6.1.1.19; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAMPYLOBACTER JEJUNI; SOURCE 3 ORGANISM_TAXID: 197; SOURCE 4 GENE: ARGS, CJ1175C KEYWDS ARGINYL T-RNA SYNTHETASE, TRANSFERASE, PSI-2, NYSGXRC, STRUCTURAL KEYWDS 2 GENOMICS, PROTEIN STRUCTURE INITIATIVE, NEW YORK SGX RESEARCH CENTER KEYWDS 3 FOR STRUCTURAL GENOMICS, AMINOACYL-TRNA SYNTHETASE, ATP-BINDING, KEYWDS 4 LIGASE, NUCLEOTIDE-BINDING, PROTEIN BIOSYNTHESIS EXPDTA X-RAY DIFFRACTION AUTHOR Y.PATSKOVSKY,U.RAMAGOPAL,R.TORO,M.GILMORE,S.CHANG,C.GROSHONG, AUTHOR 2 J.M.SAUDER,S.K.BURLEY,S.C.ALMO,NEW YORK SGX RESEARCH CENTER FOR AUTHOR 3 STRUCTURAL GENOMICS (NYSGXRC) REVDAT 6 21-FEB-24 3FNR 1 REMARK REVDAT 5 20-OCT-21 3FNR 1 SEQADV REVDAT 4 10-FEB-21 3FNR 1 AUTHOR JRNL REMARK REVDAT 3 21-NOV-18 3FNR 1 AUTHOR REVDAT 2 13-JUL-11 3FNR 1 VERSN REVDAT 1 27-JAN-09 3FNR 0 JRNL AUTH Y.PATSKOVSKY,U.RAMAGOPAL,R.TORO,M.GILMORE,S.CHANG, JRNL AUTH 2 C.GROSHONG,J.M.SAUDER,S.K.BURLEY,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE ARGINYL T-RNA SYNTHETASE JRNL TITL 2 FROM CAMPYLOBACTER JEJUNI JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 35348 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1137 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2522 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.96 REMARK 3 BIN R VALUE (WORKING SET) : 0.3040 REMARK 3 BIN FREE R VALUE SET COUNT : 86 REMARK 3 BIN FREE R VALUE : 0.3890 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3593 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 26 REMARK 3 SOLVENT ATOMS : 152 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.36000 REMARK 3 B22 (A**2) : 1.36000 REMARK 3 B33 (A**2) : -2.04000 REMARK 3 B12 (A**2) : 0.68000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.208 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.189 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.150 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.961 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.932 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3746 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5060 ; 1.116 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 465 ; 4.863 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 186 ;38.054 ;25.323 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 689 ;18.199 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;14.436 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 544 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2821 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1698 ; 0.150 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2543 ; 0.298 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 352 ; 0.152 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 47 ; 0.126 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 16 ; 0.201 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2317 ; 3.167 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3608 ; 4.753 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1615 ; 5.763 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1443 ; 8.342 ; 5.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3FNR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JAN-09. REMARK 100 THE DEPOSITION ID IS D_1000050817. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-DEC-08 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36585 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.300 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.20 REMARK 200 R MERGE FOR SHELL (I) : 0.89000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM BIS-TRIS, 200 MM AMMONIUM REMARK 280 SULFATE, 25% (V/V) PEG3350, 10% GLYCEROL, PH 5.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 294K, PH 5.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.00567 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 140.01133 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 105.00850 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 175.01417 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 35.00283 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 70.00567 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 140.01133 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 175.01417 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 105.00850 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 35.00283 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: POSSIBLY MONOMERIC REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 75 REMARK 465 SER A 76 REMARK 465 SER A 361 REMARK 465 LYS A 362 REMARK 465 ARG A 363 REMARK 465 GLU A 529 REMARK 465 HIS A 530 REMARK 465 GLU A 531 REMARK 465 GLY A 532 REMARK 465 HIS A 533 REMARK 465 HIS A 534 REMARK 465 HIS A 535 REMARK 465 HIS A 536 REMARK 465 HIS A 537 REMARK 465 HIS A 538 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 97 -1.94 71.00 REMARK 500 VAL A 111 -82.09 67.84 REMARK 500 ASP A 406 -152.76 -147.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 539 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-13562A RELATED DB: TARGETDB DBREF 3FNR A 77 530 UNP Q9PNC0 SYR_CAMJE 77 530 SEQADV 3FNR MET A 75 UNP Q9PNC0 EXPRESSION TAG SEQADV 3FNR SER A 76 UNP Q9PNC0 EXPRESSION TAG SEQADV 3FNR LEU A 77 UNP Q9PNC0 ILE 77 ENGINEERED MUTATION SEQADV 3FNR GLU A 531 UNP Q9PNC0 EXPRESSION TAG SEQADV 3FNR GLY A 532 UNP Q9PNC0 EXPRESSION TAG SEQADV 3FNR HIS A 533 UNP Q9PNC0 EXPRESSION TAG SEQADV 3FNR HIS A 534 UNP Q9PNC0 EXPRESSION TAG SEQADV 3FNR HIS A 535 UNP Q9PNC0 EXPRESSION TAG SEQADV 3FNR HIS A 536 UNP Q9PNC0 EXPRESSION TAG SEQADV 3FNR HIS A 537 UNP Q9PNC0 EXPRESSION TAG SEQADV 3FNR HIS A 538 UNP Q9PNC0 EXPRESSION TAG SEQRES 1 A 464 MET SER LEU SER LYS THR PHE LEU ASN GLU LEU ALA ASN SEQRES 2 A 464 GLN ALA LEU THR ASN PRO ASN ASP PHE THR LYS GLY GLU SEQRES 3 A 464 LYS LYS GLN GLU SER PHE LEU LEU GLU TYR VAL SER ALA SEQRES 4 A 464 ASN PRO THR GLY PRO LEU HIS ILE GLY HIS ALA ARG GLY SEQRES 5 A 464 ALA VAL PHE GLY ASP THR LEU THR ARG LEU ALA ARG HIS SEQRES 6 A 464 LEU GLY TYR LYS PHE ASN THR GLU TYR TYR VAL ASN ASP SEQRES 7 A 464 ALA GLY ASN GLN ILE TYR LEU LEU GLY LEU SER ILE LEU SEQRES 8 A 464 LEU SER VAL LYS GLU SER ILE LEU HIS GLU ASN VAL GLU SEQRES 9 A 464 TYR PRO GLU GLN TYR TYR LYS GLY GLU TYR ILE VAL ASP SEQRES 10 A 464 LEU ALA LYS GLU ALA PHE GLU LYS PHE GLY LYS GLU PHE SEQRES 11 A 464 PHE SER GLU GLU ASN ILE PRO SER LEU ALA ASP TRP ALA SEQRES 12 A 464 LYS ASP LYS MET LEU VAL LEU ILE LYS GLN ASN LEU GLU SEQRES 13 A 464 GLN ALA LYS ILE LYS ILE ASP SER TYR VAL SER GLU ARG SEQRES 14 A 464 SER TYR TYR ASP ALA LEU ASN ALA THR LEU GLU SER LEU SEQRES 15 A 464 LYS GLU HIS LYS GLY ILE TYR GLU GLN GLU GLY LYS ILE SEQRES 16 A 464 TRP LEU ALA SER SER GLN LYS GLY ASP GLU LYS ASP ARG SEQRES 17 A 464 VAL ILE ILE ARG GLU ASP GLY ARG GLY THR TYR LEU ALA SEQRES 18 A 464 ALA ASP ILE VAL TYR HIS LYS ASP LYS MET SER ARG GLY SEQRES 19 A 464 TYR GLY LYS CYS ILE ASN ILE TRP GLY ALA ASP HIS HIS SEQRES 20 A 464 GLY TYR ILE PRO ARG MET LYS ALA ALA MET GLU PHE LEU SEQRES 21 A 464 GLY PHE ASP SER ASN ASN LEU GLU ILE ILE LEU ALA GLN SEQRES 22 A 464 MET VAL SER LEU LEU LYS ASP GLY GLU PRO TYR LYS MET SEQRES 23 A 464 SER LYS ARG ALA GLY ASN PHE ILE LEU MET SER ASP VAL SEQRES 24 A 464 VAL ASP GLU ILE GLY SER ASP ALA LEU ARG TYR ILE PHE SEQRES 25 A 464 LEU SER LYS LYS CYS ASP THR HIS LEU GLU PHE ASP ILE SEQRES 26 A 464 SER ASP LEU GLN LYS GLU ASP SER SER ASN PRO VAL TYR SEQRES 27 A 464 TYR ILE ASN TYR ALA HIS ALA ARG ILE HIS GLN VAL PHE SEQRES 28 A 464 ALA LYS ALA GLY LYS LYS ILE ASP ASP VAL MET LYS ALA SEQRES 29 A 464 ASP LEU GLN SER LEU ASN GLN ASP GLY VAL ASN LEU LEU SEQRES 30 A 464 PHE GLU ALA LEU ASN LEU LYS ALA VAL LEU ASN ASP ALA SEQRES 31 A 464 PHE GLU ALA ARG ALA LEU GLN LYS ILE PRO ASP TYR LEU SEQRES 32 A 464 LYS ASN LEU ALA ALA ASN PHE HIS LYS PHE TYR ASN GLU SEQRES 33 A 464 ASN LYS VAL VAL GLY SER ALA ASN GLU ASN ASP LEU LEU SEQRES 34 A 464 LYS LEU PHE SER LEU VAL ALA LEU SER ILE LYS THR ALA SEQRES 35 A 464 PHE SER LEU MET GLY ILE GLU ALA LYS ASN LYS MET GLU SEQRES 36 A 464 HIS GLU GLY HIS HIS HIS HIS HIS HIS HET SO4 A 1 5 HET SO4 A 2 5 HET SO4 A 3 5 HET SO4 A 4 5 HET GOL A 539 6 HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 SO4 4(O4 S 2-) FORMUL 6 GOL C3 H8 O3 FORMUL 7 HOH *152(H2 O) HELIX 1 1 SER A 78 ASN A 92 1 15 HELIX 2 2 PRO A 93 PHE A 96 5 4 HELIX 3 3 HIS A 120 GLY A 122 5 3 HELIX 4 4 HIS A 123 LEU A 140 1 18 HELIX 5 5 ALA A 153 ILE A 172 1 20 HELIX 6 6 GLY A 186 GLY A 201 1 16 HELIX 7 7 LYS A 202 PHE A 205 5 4 HELIX 8 8 SER A 206 GLU A 208 5 3 HELIX 9 9 ASN A 209 ALA A 232 1 24 HELIX 10 10 ARG A 243 TYR A 246 5 4 HELIX 11 11 ALA A 248 HIS A 259 1 12 HELIX 12 12 SER A 273 GLY A 277 5 5 HELIX 13 13 THR A 292 SER A 306 1 15 HELIX 14 14 ASP A 319 GLY A 322 5 4 HELIX 15 15 TYR A 323 PHE A 333 1 11 HELIX 16 16 ASP A 337 ASN A 339 5 3 HELIX 17 17 LEU A 369 GLY A 378 1 10 HELIX 18 18 GLY A 378 PHE A 386 1 9 HELIX 19 19 SER A 400 LYS A 404 5 5 HELIX 20 20 ASN A 409 ALA A 428 1 20 HELIX 21 21 ASN A 444 ASN A 456 1 13 HELIX 22 22 ASN A 456 ARG A 468 1 13 HELIX 23 23 GLN A 471 ASN A 491 1 21 HELIX 24 24 ASN A 498 MET A 520 1 23 SHEET 1 A 5 TYR A 239 SER A 241 0 SHEET 2 A 5 LYS A 143 VAL A 150 1 N VAL A 150 O VAL A 240 SHEET 3 A 5 SER A 105 GLU A 109 1 N LEU A 108 O ASN A 145 SHEET 4 A 5 LYS A 311 GLY A 317 1 O ILE A 313 N GLU A 109 SHEET 5 A 5 LEU A 341 ALA A 346 1 O ILE A 344 N ASN A 314 SHEET 1 B 3 ILE A 262 GLN A 265 0 SHEET 2 B 3 LYS A 268 LEU A 271 -1 O TRP A 270 N TYR A 263 SHEET 3 B 3 ARG A 282 ILE A 285 -1 O ARG A 282 N LEU A 271 SHEET 1 C 3 GLU A 356 PRO A 357 0 SHEET 2 C 3 VAL A 349 LYS A 353 -1 N LYS A 353 O GLU A 356 SHEET 3 C 3 LEU A 395 ASP A 398 1 O LEU A 395 N SER A 350 SITE 1 AC1 7 HOH A 60 GLY A 99 GLU A 100 LYS A 102 SITE 2 AC1 7 LYS A 458 HOH A 603 HOH A 604 SITE 1 AC2 4 HOH A 68 ARG A 286 THR A 292 TYR A 293 SITE 1 AC3 6 LYS A 427 TYR A 488 LYS A 492 VAL A 493 SITE 2 AC3 6 VAL A 494 HOH A 593 SITE 1 AC4 4 GLY A 154 ASN A 155 ARG A 243 TYR A 246 SITE 1 AC5 2 ASP A 297 HOH A 633 CRYST1 106.595 106.595 210.017 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009381 0.005416 0.000000 0.00000 SCALE2 0.000000 0.010833 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004762 0.00000