data_3FNT # _entry.id 3FNT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3FNT pdb_00003fnt 10.2210/pdb3fnt/pdb RCSB RCSB050819 ? ? WWPDB D_1000050819 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3FNS 'Crystal structure of histo-aspartic protease (HAP) from Plasmodium Falciparum' unspecified PDB 3FNU 'Crystal structure of KNI-10006 bound histo-aspartic protease (HAP) from Plasmodium falciparum' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3FNT _pdbx_database_status.recvd_initial_deposition_date 2008-12-26 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bhaumik, P.' 1 'Gustchina, A.' 2 'Wlodawer, A.' 3 # _citation.id primary _citation.title 'Crystal structures of the histo-aspartic protease (HAP) from plasmodium falciparum.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 388 _citation.page_first 520 _citation.page_last 540 _citation.year 2009 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19285084 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2009.03.011 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bhaumik, P.' 1 ? primary 'Xiao, H.' 2 ? primary 'Parr, C.L.' 3 ? primary 'Kiso, Y.' 4 ? primary 'Gustchina, A.' 5 ? primary 'Yada, R.Y.' 6 ? primary 'Wlodawer, A.' 7 ? # _cell.entry_id 3FNT _cell.length_a 70.7 _cell.length_b 70.7 _cell.length_c 158.7 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3FNT _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'HAP protein' 37435.250 1 ? ? 'Histo-aspartic protease (HAP)' ? 2 polymer syn 'Inhibitor, (IVA)VV(STA)A(STA)' 685.891 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 4 water nat water 18.015 9 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;SYLGSEFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCESKNHYDSSKSKTYEKDDTPVKLT SKAGTISGIFSKDLVTIGKLSVPYKFIEMTEIVGFEPFYSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSI YLPPENKNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLDVHFGNVSSKKANVILDSATSVITVPTEFFNQFVESASV FKVPFLSLYVTTCGNTKLPTLEYRSPNKVYTLEPKQYLEPLENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYD NHTVGFALAKNL ; ;SYLGSEFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCESKNHYDSSKSKTYEKDDTPVKLT SKAGTISGIFSKDLVTIGKLSVPYKFIEMTEIVGFEPFYSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSI YLPPENKNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLDVHFGNVSSKKANVILDSATSVITVPTEFFNQFVESASV FKVPFLSLYVTTCGNTKLPTLEYRSPNKVYTLEPKQYLEPLENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYD NHTVGFALAKNL ; A ? 2 'polypeptide(L)' no yes '(IVA)VV(STA)A(STA)' XVVXAX I ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 TYR n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 GLU n 1 7 PHE n 1 8 ASP n 1 9 ASN n 1 10 VAL n 1 11 GLU n 1 12 LEU n 1 13 LYS n 1 14 ASP n 1 15 LEU n 1 16 ALA n 1 17 ASN n 1 18 VAL n 1 19 LEU n 1 20 SER n 1 21 PHE n 1 22 GLY n 1 23 GLU n 1 24 ALA n 1 25 LYS n 1 26 LEU n 1 27 GLY n 1 28 ASP n 1 29 ASN n 1 30 GLY n 1 31 GLN n 1 32 LYS n 1 33 PHE n 1 34 ASN n 1 35 PHE n 1 36 LEU n 1 37 PHE n 1 38 HIS n 1 39 THR n 1 40 ALA n 1 41 SER n 1 42 SER n 1 43 ASN n 1 44 VAL n 1 45 TRP n 1 46 VAL n 1 47 PRO n 1 48 SER n 1 49 ILE n 1 50 LYS n 1 51 CYS n 1 52 THR n 1 53 SER n 1 54 GLU n 1 55 SER n 1 56 CYS n 1 57 GLU n 1 58 SER n 1 59 LYS n 1 60 ASN n 1 61 HIS n 1 62 TYR n 1 63 ASP n 1 64 SER n 1 65 SER n 1 66 LYS n 1 67 SER n 1 68 LYS n 1 69 THR n 1 70 TYR n 1 71 GLU n 1 72 LYS n 1 73 ASP n 1 74 ASP n 1 75 THR n 1 76 PRO n 1 77 VAL n 1 78 LYS n 1 79 LEU n 1 80 THR n 1 81 SER n 1 82 LYS n 1 83 ALA n 1 84 GLY n 1 85 THR n 1 86 ILE n 1 87 SER n 1 88 GLY n 1 89 ILE n 1 90 PHE n 1 91 SER n 1 92 LYS n 1 93 ASP n 1 94 LEU n 1 95 VAL n 1 96 THR n 1 97 ILE n 1 98 GLY n 1 99 LYS n 1 100 LEU n 1 101 SER n 1 102 VAL n 1 103 PRO n 1 104 TYR n 1 105 LYS n 1 106 PHE n 1 107 ILE n 1 108 GLU n 1 109 MET n 1 110 THR n 1 111 GLU n 1 112 ILE n 1 113 VAL n 1 114 GLY n 1 115 PHE n 1 116 GLU n 1 117 PRO n 1 118 PHE n 1 119 TYR n 1 120 SER n 1 121 GLU n 1 122 SER n 1 123 ASP n 1 124 VAL n 1 125 ASP n 1 126 GLY n 1 127 VAL n 1 128 PHE n 1 129 GLY n 1 130 LEU n 1 131 GLY n 1 132 TRP n 1 133 LYS n 1 134 ASP n 1 135 LEU n 1 136 SER n 1 137 ILE n 1 138 GLY n 1 139 SER n 1 140 ILE n 1 141 ASP n 1 142 PRO n 1 143 TYR n 1 144 ILE n 1 145 VAL n 1 146 GLU n 1 147 LEU n 1 148 LYS n 1 149 THR n 1 150 GLN n 1 151 ASN n 1 152 LYS n 1 153 ILE n 1 154 GLU n 1 155 GLN n 1 156 ALA n 1 157 VAL n 1 158 TYR n 1 159 SER n 1 160 ILE n 1 161 TYR n 1 162 LEU n 1 163 PRO n 1 164 PRO n 1 165 GLU n 1 166 ASN n 1 167 LYS n 1 168 ASN n 1 169 LYS n 1 170 GLY n 1 171 TYR n 1 172 LEU n 1 173 THR n 1 174 ILE n 1 175 GLY n 1 176 GLY n 1 177 ILE n 1 178 GLU n 1 179 GLU n 1 180 ARG n 1 181 PHE n 1 182 PHE n 1 183 ASP n 1 184 GLY n 1 185 PRO n 1 186 LEU n 1 187 ASN n 1 188 TYR n 1 189 GLU n 1 190 LYS n 1 191 LEU n 1 192 ASN n 1 193 HIS n 1 194 ASP n 1 195 LEU n 1 196 MET n 1 197 TRP n 1 198 GLN n 1 199 VAL n 1 200 ASP n 1 201 LEU n 1 202 ASP n 1 203 VAL n 1 204 HIS n 1 205 PHE n 1 206 GLY n 1 207 ASN n 1 208 VAL n 1 209 SER n 1 210 SER n 1 211 LYS n 1 212 LYS n 1 213 ALA n 1 214 ASN n 1 215 VAL n 1 216 ILE n 1 217 LEU n 1 218 ASP n 1 219 SER n 1 220 ALA n 1 221 THR n 1 222 SER n 1 223 VAL n 1 224 ILE n 1 225 THR n 1 226 VAL n 1 227 PRO n 1 228 THR n 1 229 GLU n 1 230 PHE n 1 231 PHE n 1 232 ASN n 1 233 GLN n 1 234 PHE n 1 235 VAL n 1 236 GLU n 1 237 SER n 1 238 ALA n 1 239 SER n 1 240 VAL n 1 241 PHE n 1 242 LYS n 1 243 VAL n 1 244 PRO n 1 245 PHE n 1 246 LEU n 1 247 SER n 1 248 LEU n 1 249 TYR n 1 250 VAL n 1 251 THR n 1 252 THR n 1 253 CYS n 1 254 GLY n 1 255 ASN n 1 256 THR n 1 257 LYS n 1 258 LEU n 1 259 PRO n 1 260 THR n 1 261 LEU n 1 262 GLU n 1 263 TYR n 1 264 ARG n 1 265 SER n 1 266 PRO n 1 267 ASN n 1 268 LYS n 1 269 VAL n 1 270 TYR n 1 271 THR n 1 272 LEU n 1 273 GLU n 1 274 PRO n 1 275 LYS n 1 276 GLN n 1 277 TYR n 1 278 LEU n 1 279 GLU n 1 280 PRO n 1 281 LEU n 1 282 GLU n 1 283 ASN n 1 284 ILE n 1 285 PHE n 1 286 SER n 1 287 ALA n 1 288 LEU n 1 289 CYS n 1 290 MET n 1 291 LEU n 1 292 ASN n 1 293 ILE n 1 294 VAL n 1 295 PRO n 1 296 ILE n 1 297 ASP n 1 298 LEU n 1 299 GLU n 1 300 LYS n 1 301 ASN n 1 302 THR n 1 303 PHE n 1 304 VAL n 1 305 LEU n 1 306 GLY n 1 307 ASP n 1 308 PRO n 1 309 PHE n 1 310 MET n 1 311 ARG n 1 312 LYS n 1 313 TYR n 1 314 PHE n 1 315 THR n 1 316 VAL n 1 317 TYR n 1 318 ASP n 1 319 TYR n 1 320 ASP n 1 321 ASN n 1 322 HIS n 1 323 THR n 1 324 VAL n 1 325 GLY n 1 326 PHE n 1 327 ALA n 1 328 LEU n 1 329 ALA n 1 330 LYS n 1 331 ASN n 1 332 LEU n 2 1 IVA n 2 2 VAL n 2 3 VAL n 2 4 STA n 2 5 ALA n 2 6 STA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'HAP, PF14_0078' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 3D7 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Plasmodium falciparum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 36329 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosetta-gami B (DE3)pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET32b(+)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Streptomyces argenteolus subsp. toyonakensis' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 285516 _pdbx_entity_src_syn.details unspecified # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q8IM15_PLAF7 Q8IM15 1 ;SYLGSEFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCESKNHYDSSKSKTYEKDDTPVKLT SKAGTISGIFSKDLVTIGKLSVPYKFIEMTEIVGFEPFYSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSI YLPPENKNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLDVHFGNVSSKKANVILDSATSVITVPTEFFNQFVESASV FKVPFLSLYVTTCGNTKLPTLEYRSPNKVYTLEPKQYLEPLENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYD NHTVGFALAKNL ; 120 ? 2 PDB 3FNT 3FNT 2 '(IVA)VV(STA)A(STA)' ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3FNT A 1 ? 332 ? Q8IM15 120 ? 451 ? -5 328 2 2 3FNT I 1 ? 6 ? 3FNT 1 ? 6 ? 1 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IVA non-polymer . 'ISOVALERIC ACID' ? 'C5 H10 O2' 102.132 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 STA peptide-like . STATINE ? 'C8 H17 N O3' 175.225 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3FNT _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.00 _exptl_crystal.density_percent_sol 59.05 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '15% PEG 20000, 0.1M Tris-HCl pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.pdbx_collection_date 2008-04-11 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 3FNT _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40.0 _reflns.d_resolution_high 3.3 _reflns.number_obs 7350 _reflns.number_all 7374 _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.20 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_netI_over_sigmaI ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 3.3 _reflns_shell.d_res_low 3.4 _reflns_shell.percent_possible_all 99.5 _reflns_shell.Rmerge_I_obs 0.885 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.2 _reflns_shell.pdbx_redundancy 6.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 631 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3FNT _refine.ls_number_reflns_obs 6939 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 3.30 _refine.ls_percent_reflns_obs 100.00 _refine.ls_R_factor_obs 0.288 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.285 _refine.ls_R_factor_R_free 0.353 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 366 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.881 _refine.correlation_coeff_Fo_to_Fc_free 0.865 _refine.B_iso_mean 66.573 _refine.aniso_B[1][1] -0.55 _refine.aniso_B[2][2] -0.55 _refine.aniso_B[3][3] 0.82 _refine.aniso_B[1][2] -0.27 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 1SME _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.732 _refine.overall_SU_ML 0.840 _refine.overall_SU_B 113.939 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2618 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 9 _refine_hist.number_atoms_total 2635 _refine_hist.d_res_high 3.30 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.024 0.022 ? 2690 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.253 1.984 ? 3649 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 9.214 5.000 ? 322 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 43.115 25.556 ? 117 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 22.356 15.000 ? 451 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14.072 15.000 ? 3 'X-RAY DIFFRACTION' ? r_chiral_restr 0.128 0.200 ? 412 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.009 0.021 ? 2014 'X-RAY DIFFRACTION' ? r_mcbond_it 0.902 1.500 ? 1612 'X-RAY DIFFRACTION' ? r_mcangle_it 1.710 2.000 ? 2629 'X-RAY DIFFRACTION' ? r_scbond_it 2.007 3.000 ? 1078 'X-RAY DIFFRACTION' ? r_scangle_it 3.613 4.500 ? 1020 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 3.30 _refine_ls_shell.d_res_low 3.384 _refine_ls_shell.number_reflns_R_work 492 _refine_ls_shell.R_factor_R_work 0.450 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.473 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 26 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3FNT _struct.title 'Crystal structure of pepstatin A bound histo-aspartic protease (HAP) from Plasmodium falciparum' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3FNT _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'Histo-aspartic protease, HAP, Plasmepsin, Pepstatin A, Aspartic protease, HYDROLASE-HYDROLASE INHIBITOR COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ;One molecule of histo-aspartic protease (HAP) is present in the asymmetric unit. One pepstatin A molecule is bound to the active site of the enzyme ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 53 ? LYS A 59 ? SER A 47 LYS A 53 5 ? 7 HELX_P HELX_P2 2 PRO A 117 ? SER A 122 ? PRO A 110 SER A 115 1 ? 6 HELX_P HELX_P3 3 PRO A 142 ? GLU A 146 ? PRO A 135 GLU A 139 5 ? 5 HELX_P HELX_P4 4 PRO A 227 ? GLU A 236 ? PRO A 224 GLU A 233 1 ? 10 HELX_P HELX_P5 5 GLU A 273 ? GLN A 276 ? GLU A 270 GLN A 273 5 ? 4 HELX_P HELX_P6 6 GLY A 306 ? ARG A 311 ? GLY A 302 ARG A 307 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 51 SG ? ? ? 1_555 A CYS 56 SG ? ? A CYS 45 A CYS 50 1_555 ? ? ? ? ? ? ? 2.005 ? ? disulf2 disulf ? ? A CYS 253 SG ? ? ? 1_555 A CYS 289 SG ? ? A CYS 249 A CYS 282 1_555 ? ? ? ? ? ? ? 2.026 ? ? covale1 covale both ? B IVA 1 C ? ? ? 1_555 B VAL 2 N ? ? I IVA 1 I VAL 2 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale2 covale both ? B VAL 3 C ? ? ? 1_555 B STA 4 N ? ? I VAL 3 I STA 4 1_555 ? ? ? ? ? ? ? 1.254 ? ? covale3 covale both ? B STA 4 C ? ? ? 1_555 B ALA 5 N ? ? I STA 4 I ALA 5 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale4 covale both ? B ALA 5 C ? ? ? 1_555 B STA 6 N ? ? I ALA 5 I STA 6 1_555 ? ? ? ? ? ? ? 1.384 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLU _struct_mon_prot_cis.label_seq_id 116 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code B _struct_mon_prot_cis.auth_comp_id GLU _struct_mon_prot_cis.auth_seq_id 109 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 117 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 110 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 3.47 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 8 ? C ? 5 ? D ? 2 ? E ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? parallel D 1 2 ? parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASN A 9 ? LEU A 12 ? ASN A 3 LEU A 6 A 2 GLY A 170 ? ILE A 174 ? GLY A 163 ILE A 167 A 3 VAL A 157 ? TYR A 161 ? VAL A 150 TYR A 154 A 4 PHE A 314 ? ASP A 318 ? PHE A 310 ASP A 314 A 5 THR A 323 ? ALA A 327 ? THR A 319 ALA A 323 B 1 GLU A 71 ? THR A 80 ? GLU A 65 THR A 74 B 2 THR A 85 ? THR A 96 ? THR A 79 THR A 90 B 3 PRO A 103 ? ILE A 112 ? PRO A 98 ILE A 107 B 4 TRP A 45 ? PRO A 47 ? TRP A 39 PRO A 41 B 5 GLY A 126 ? GLY A 129 ? GLY A 119 GLY A 122 B 6 GLN A 31 ? HIS A 38 ? GLN A 25 HIS A 32 B 7 GLY A 22 ? LEU A 26 ? GLY A 16 LEU A 20 B 8 THR A 85 ? THR A 96 ? THR A 79 THR A 90 C 1 TYR A 270 ? LEU A 272 ? TYR A 267 LEU A 269 C 2 LEU A 261 ? ARG A 264 ? LEU A 258 ARG A 261 C 3 GLN A 198 ? HIS A 204 ? GLN A 191 HIS A 198 C 4 SER A 209 ? LEU A 217 ? SER A 206 LEU A 214 C 5 THR A 302 ? LEU A 305 ? THR A 298 LEU A 301 D 1 ILE A 224 ? VAL A 226 ? ILE A 221 VAL A 223 D 2 ILE A 293 ? PRO A 295 ? ILE A 286 PRO A 288 E 1 PHE A 241 ? VAL A 243 ? PHE A 238 VAL A 240 E 2 LEU A 246 ? THR A 252 ? LEU A 243 THR A 248 E 3 LEU A 288 ? LEU A 291 ? LEU A 281 LEU A 284 E 4 LEU A 278 ? PRO A 280 ? LEU A 275 PRO A 277 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 12 ? N LEU A 6 O GLY A 170 ? O GLY A 163 A 2 3 O TYR A 171 ? O TYR A 164 N TYR A 161 ? N TYR A 154 A 3 4 N TYR A 158 ? N TYR A 151 O TYR A 317 ? O TYR A 313 A 4 5 N VAL A 316 ? N VAL A 312 O GLY A 325 ? O GLY A 321 B 1 2 N LEU A 79 ? N LEU A 73 O ILE A 86 ? O ILE A 80 B 2 3 N ILE A 89 ? N ILE A 83 O GLU A 108 ? O GLU A 103 B 3 4 O MET A 109 ? O MET A 104 N VAL A 46 ? N VAL A 40 B 4 5 N TRP A 45 ? N TRP A 39 O VAL A 127 ? O VAL A 120 B 5 6 O GLY A 126 ? O GLY A 119 N ASN A 34 ? N ASN A 28 B 6 7 O PHE A 35 ? O PHE A 29 N GLY A 22 ? N GLY A 16 B 7 8 N LYS A 25 ? N LYS A 19 O THR A 96 ? O THR A 90 C 1 2 O LEU A 272 ? O LEU A 269 N LEU A 261 ? N LEU A 258 C 2 3 O GLU A 262 ? O GLU A 259 N HIS A 204 ? N HIS A 198 C 3 4 N LEU A 201 ? N LEU A 194 O ALA A 213 ? O ALA A 210 C 4 5 N ILE A 216 ? N ILE A 213 O LEU A 305 ? O LEU A 301 D 1 2 N VAL A 226 ? N VAL A 223 O VAL A 294 ? O VAL A 287 E 1 2 N PHE A 241 ? N PHE A 238 O VAL A 250 ? O VAL A 246 E 2 3 N THR A 251 ? N THR A 247 O CYS A 289 ? O CYS A 282 E 3 4 O MET A 290 ? O MET A 283 N GLU A 279 ? N GLU A 276 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id EDO _struct_site.pdbx_auth_seq_id 501 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE EDO A 501' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 ASN A 9 ? ASN A 3 . ? 4_455 ? 2 AC1 4 ASP A 134 ? ASP A 127 . ? 1_555 ? 3 AC1 4 SER A 136 ? SER A 129 . ? 1_555 ? 4 AC1 4 SER A 139 ? SER A 132 . ? 1_555 ? # _database_PDB_matrix.entry_id 3FNT _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3FNT _atom_sites.fract_transf_matrix[1][1] 0.014138 _atom_sites.fract_transf_matrix[1][2] 0.008163 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016325 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006302 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -5 ? ? ? A . n A 1 2 TYR 2 -4 ? ? ? A . n A 1 3 LEU 3 -3 ? ? ? A . n A 1 4 GLY 4 -2 ? ? ? A . n A 1 5 SER 5 -1 ? ? ? A . n A 1 6 GLU 6 0 ? ? ? A . n A 1 7 PHE 7 1 ? ? ? A . n A 1 8 ASP 8 2 2 ASP ASP A . n A 1 9 ASN 9 3 3 ASN ASN A . n A 1 10 VAL 10 4 4 VAL VAL A . n A 1 11 GLU 11 5 5 GLU GLU A . n A 1 12 LEU 12 6 6 LEU LEU A . n A 1 13 LYS 13 7 7 LYS LYS A . n A 1 14 ASP 14 8 8 ASP ASP A . n A 1 15 LEU 15 9 9 LEU LEU A . n A 1 16 ALA 16 10 10 ALA ALA A . n A 1 17 ASN 17 11 11 ASN ASN A . n A 1 18 VAL 18 12 12 VAL VAL A . n A 1 19 LEU 19 13 13 LEU LEU A . n A 1 20 SER 20 14 14 SER SER A . n A 1 21 PHE 21 15 15 PHE PHE A . n A 1 22 GLY 22 16 16 GLY GLY A . n A 1 23 GLU 23 17 17 GLU GLU A . n A 1 24 ALA 24 18 18 ALA ALA A . n A 1 25 LYS 25 19 19 LYS LYS A . n A 1 26 LEU 26 20 20 LEU LEU A . n A 1 27 GLY 27 21 21 GLY GLY A . n A 1 28 ASP 28 22 22 ASP ASP A . n A 1 29 ASN 29 23 23 ASN ASN A . n A 1 30 GLY 30 24 24 GLY GLY A . n A 1 31 GLN 31 25 25 GLN GLN A . n A 1 32 LYS 32 26 26 LYS LYS A . n A 1 33 PHE 33 27 27 PHE PHE A . n A 1 34 ASN 34 28 28 ASN ASN A . n A 1 35 PHE 35 29 29 PHE PHE A . n A 1 36 LEU 36 30 30 LEU LEU A . n A 1 37 PHE 37 31 31 PHE PHE A . n A 1 38 HIS 38 32 32 HIS HIS A . n A 1 39 THR 39 33 33 THR THR A . n A 1 40 ALA 40 34 34 ALA ALA A . n A 1 41 SER 41 35 35 SER SER A . n A 1 42 SER 42 36 36 SER SER A . n A 1 43 ASN 43 37 37 ASN ASN A . n A 1 44 VAL 44 38 38 VAL VAL A . n A 1 45 TRP 45 39 39 TRP TRP A . n A 1 46 VAL 46 40 40 VAL VAL A . n A 1 47 PRO 47 41 41 PRO PRO A . n A 1 48 SER 48 42 42 SER SER A . n A 1 49 ILE 49 43 43 ILE ILE A . n A 1 50 LYS 50 44 44 LYS LYS A . n A 1 51 CYS 51 45 45 CYS CYS A . n A 1 52 THR 52 46 46 THR THR A . n A 1 53 SER 53 47 47 SER SER A . n A 1 54 GLU 54 48 48 GLU GLU A . n A 1 55 SER 55 49 49 SER SER A . n A 1 56 CYS 56 50 50 CYS CYS A . n A 1 57 GLU 57 51 51 GLU GLU A . n A 1 58 SER 58 52 52 SER SER A . n A 1 59 LYS 59 53 53 LYS LYS A . n A 1 60 ASN 60 54 54 ASN ASN A . n A 1 61 HIS 61 55 55 HIS HIS A . n A 1 62 TYR 62 56 56 TYR TYR A . n A 1 63 ASP 63 57 57 ASP ASP A . n A 1 64 SER 64 58 58 SER SER A . n A 1 65 SER 65 59 59 SER SER A . n A 1 66 LYS 66 60 60 LYS LYS A . n A 1 67 SER 67 61 61 SER SER A . n A 1 68 LYS 68 62 62 LYS LYS A . n A 1 69 THR 69 63 63 THR THR A . n A 1 70 TYR 70 64 64 TYR TYR A . n A 1 71 GLU 71 65 65 GLU GLU A . n A 1 72 LYS 72 66 66 LYS LYS A . n A 1 73 ASP 73 67 67 ASP ASP A . n A 1 74 ASP 74 68 68 ASP ASP A . n A 1 75 THR 75 69 69 THR THR A . n A 1 76 PRO 76 70 70 PRO PRO A . n A 1 77 VAL 77 71 71 VAL VAL A . n A 1 78 LYS 78 72 72 LYS LYS A . n A 1 79 LEU 79 73 73 LEU LEU A . n A 1 80 THR 80 74 74 THR THR A . n A 1 81 SER 81 75 75 SER SER A . n A 1 82 LYS 82 76 76 LYS LYS A . n A 1 83 ALA 83 77 77 ALA ALA A . n A 1 84 GLY 84 78 78 GLY GLY A . n A 1 85 THR 85 79 79 THR THR A . n A 1 86 ILE 86 80 80 ILE ILE A . n A 1 87 SER 87 81 81 SER SER A . n A 1 88 GLY 88 82 82 GLY GLY A . n A 1 89 ILE 89 83 83 ILE ILE A . n A 1 90 PHE 90 84 84 PHE PHE A . n A 1 91 SER 91 85 85 SER SER A . n A 1 92 LYS 92 86 86 LYS LYS A . n A 1 93 ASP 93 87 87 ASP ASP A . n A 1 94 LEU 94 88 88 LEU LEU A . n A 1 95 VAL 95 89 89 VAL VAL A . n A 1 96 THR 96 90 90 THR THR A . n A 1 97 ILE 97 91 91 ILE ILE A . n A 1 98 GLY 98 92 92 GLY GLY A . n A 1 99 LYS 99 93 93 LYS LYS A . n A 1 100 LEU 100 94 94 LEU LEU A . n A 1 101 SER 101 95 95 SER SER A . n A 1 102 VAL 102 96 96 VAL VAL A . n A 1 103 PRO 103 98 98 PRO PRO A . n A 1 104 TYR 104 99 99 TYR TYR A . n A 1 105 LYS 105 100 100 LYS LYS A . n A 1 106 PHE 106 101 101 PHE PHE A . n A 1 107 ILE 107 102 102 ILE ILE A . n A 1 108 GLU 108 103 103 GLU GLU A . n A 1 109 MET 109 104 104 MET MET A . n A 1 110 THR 110 105 105 THR THR A . n A 1 111 GLU 111 106 106 GLU GLU A . n A 1 112 ILE 112 107 107 ILE ILE A . n A 1 113 VAL 113 108 108 VAL VAL A . n A 1 114 GLY 114 109 109 GLY GLY A . n A 1 115 PHE 115 109 109 PHE PHE A A n A 1 116 GLU 116 109 109 GLU GLU A B n A 1 117 PRO 117 110 110 PRO PRO A . n A 1 118 PHE 118 111 111 PHE PHE A . n A 1 119 TYR 119 112 112 TYR TYR A . n A 1 120 SER 120 113 113 SER SER A . n A 1 121 GLU 121 114 114 GLU GLU A . n A 1 122 SER 122 115 115 SER SER A . n A 1 123 ASP 123 116 116 ASP ASP A . n A 1 124 VAL 124 117 117 VAL VAL A . n A 1 125 ASP 125 118 118 ASP ASP A . n A 1 126 GLY 126 119 119 GLY GLY A . n A 1 127 VAL 127 120 120 VAL VAL A . n A 1 128 PHE 128 121 121 PHE PHE A . n A 1 129 GLY 129 122 122 GLY GLY A . n A 1 130 LEU 130 123 123 LEU LEU A . n A 1 131 GLY 131 124 124 GLY GLY A . n A 1 132 TRP 132 125 125 TRP TRP A . n A 1 133 LYS 133 126 126 LYS LYS A . n A 1 134 ASP 134 127 127 ASP ASP A . n A 1 135 LEU 135 128 128 LEU LEU A . n A 1 136 SER 136 129 129 SER SER A . n A 1 137 ILE 137 130 130 ILE ILE A . n A 1 138 GLY 138 131 131 GLY GLY A . n A 1 139 SER 139 132 132 SER SER A . n A 1 140 ILE 140 133 133 ILE ILE A . n A 1 141 ASP 141 134 134 ASP ASP A . n A 1 142 PRO 142 135 135 PRO PRO A . n A 1 143 TYR 143 136 136 TYR TYR A . n A 1 144 ILE 144 137 137 ILE ILE A . n A 1 145 VAL 145 138 138 VAL VAL A . n A 1 146 GLU 146 139 139 GLU GLU A . n A 1 147 LEU 147 140 140 LEU LEU A . n A 1 148 LYS 148 141 141 LYS LYS A . n A 1 149 THR 149 142 142 THR THR A . n A 1 150 GLN 150 143 143 GLN GLN A . n A 1 151 ASN 151 144 144 ASN ASN A . n A 1 152 LYS 152 145 145 LYS LYS A . n A 1 153 ILE 153 146 146 ILE ILE A . n A 1 154 GLU 154 147 147 GLU GLU A . n A 1 155 GLN 155 148 148 GLN GLN A . n A 1 156 ALA 156 149 149 ALA ALA A . n A 1 157 VAL 157 150 150 VAL VAL A . n A 1 158 TYR 158 151 151 TYR TYR A . n A 1 159 SER 159 152 152 SER SER A . n A 1 160 ILE 160 153 153 ILE ILE A . n A 1 161 TYR 161 154 154 TYR TYR A . n A 1 162 LEU 162 155 155 LEU LEU A . n A 1 163 PRO 163 156 156 PRO PRO A . n A 1 164 PRO 164 157 157 PRO PRO A . n A 1 165 GLU 165 158 158 GLU GLU A . n A 1 166 ASN 166 159 159 ASN ASN A . n A 1 167 LYS 167 160 160 LYS LYS A . n A 1 168 ASN 168 161 161 ASN ASN A . n A 1 169 LYS 169 162 162 LYS LYS A . n A 1 170 GLY 170 163 163 GLY GLY A . n A 1 171 TYR 171 164 164 TYR TYR A . n A 1 172 LEU 172 165 165 LEU LEU A . n A 1 173 THR 173 166 166 THR THR A . n A 1 174 ILE 174 167 167 ILE ILE A . n A 1 175 GLY 175 168 168 GLY GLY A . n A 1 176 GLY 176 169 169 GLY GLY A . n A 1 177 ILE 177 170 170 ILE ILE A . n A 1 178 GLU 178 171 171 GLU GLU A . n A 1 179 GLU 179 172 172 GLU GLU A . n A 1 180 ARG 180 173 173 ARG ARG A . n A 1 181 PHE 181 174 174 PHE PHE A . n A 1 182 PHE 182 175 175 PHE PHE A . n A 1 183 ASP 183 176 176 ASP ASP A . n A 1 184 GLY 184 177 177 GLY GLY A . n A 1 185 PRO 185 178 178 PRO PRO A . n A 1 186 LEU 186 179 179 LEU LEU A . n A 1 187 ASN 187 180 180 ASN ASN A . n A 1 188 TYR 188 181 181 TYR TYR A . n A 1 189 GLU 189 182 182 GLU GLU A . n A 1 190 LYS 190 183 183 LYS LYS A . n A 1 191 LEU 191 184 184 LEU LEU A . n A 1 192 ASN 192 185 185 ASN ASN A . n A 1 193 HIS 193 186 186 HIS HIS A . n A 1 194 ASP 194 187 187 ASP ASP A . n A 1 195 LEU 195 188 188 LEU LEU A . n A 1 196 MET 196 189 189 MET MET A . n A 1 197 TRP 197 190 190 TRP TRP A . n A 1 198 GLN 198 191 191 GLN GLN A . n A 1 199 VAL 199 192 192 VAL VAL A . n A 1 200 ASP 200 193 193 ASP ASP A . n A 1 201 LEU 201 194 194 LEU LEU A . n A 1 202 ASP 202 195 195 ASP ASP A . n A 1 203 VAL 203 197 197 VAL VAL A . n A 1 204 HIS 204 198 198 HIS HIS A . n A 1 205 PHE 205 199 199 PHE PHE A . n A 1 206 GLY 206 201 201 GLY GLY A . n A 1 207 ASN 207 203 203 ASN ASN A . n A 1 208 VAL 208 205 205 VAL VAL A . n A 1 209 SER 209 206 206 SER SER A . n A 1 210 SER 210 207 207 SER SER A . n A 1 211 LYS 211 208 208 LYS LYS A . n A 1 212 LYS 212 209 209 LYS LYS A . n A 1 213 ALA 213 210 210 ALA ALA A . n A 1 214 ASN 214 211 211 ASN ASN A . n A 1 215 VAL 215 212 212 VAL VAL A . n A 1 216 ILE 216 213 213 ILE ILE A . n A 1 217 LEU 217 214 214 LEU LEU A . n A 1 218 ASP 218 215 215 ASP ASP A . n A 1 219 SER 219 216 216 SER SER A . n A 1 220 ALA 220 217 217 ALA ALA A . n A 1 221 THR 221 218 218 THR THR A . n A 1 222 SER 222 219 219 SER SER A . n A 1 223 VAL 223 220 220 VAL VAL A . n A 1 224 ILE 224 221 221 ILE ILE A . n A 1 225 THR 225 222 222 THR THR A . n A 1 226 VAL 226 223 223 VAL VAL A . n A 1 227 PRO 227 224 224 PRO PRO A . n A 1 228 THR 228 225 225 THR THR A . n A 1 229 GLU 229 226 226 GLU GLU A . n A 1 230 PHE 230 227 227 PHE PHE A . n A 1 231 PHE 231 228 228 PHE PHE A . n A 1 232 ASN 232 229 229 ASN ASN A . n A 1 233 GLN 233 230 230 GLN GLN A . n A 1 234 PHE 234 231 231 PHE PHE A . n A 1 235 VAL 235 232 232 VAL VAL A . n A 1 236 GLU 236 233 233 GLU GLU A . n A 1 237 SER 237 234 234 SER SER A . n A 1 238 ALA 238 235 235 ALA ALA A . n A 1 239 SER 239 236 236 SER SER A . n A 1 240 VAL 240 237 237 VAL VAL A . n A 1 241 PHE 241 238 238 PHE PHE A . n A 1 242 LYS 242 239 239 LYS LYS A . n A 1 243 VAL 243 240 240 VAL VAL A . n A 1 244 PRO 244 241 241 PRO PRO A . n A 1 245 PHE 245 242 242 PHE PHE A . n A 1 246 LEU 246 243 243 LEU LEU A . n A 1 247 SER 247 243 243 SER SER A A n A 1 248 LEU 248 244 244 LEU LEU A . n A 1 249 TYR 249 245 245 TYR TYR A . n A 1 250 VAL 250 246 246 VAL VAL A . n A 1 251 THR 251 247 247 THR THR A . n A 1 252 THR 252 248 248 THR THR A . n A 1 253 CYS 253 249 249 CYS CYS A . n A 1 254 GLY 254 250 250 GLY GLY A . n A 1 255 ASN 255 251 251 ASN ASN A . n A 1 256 THR 256 253 253 THR THR A . n A 1 257 LYS 257 254 254 LYS LYS A . n A 1 258 LEU 258 255 255 LEU LEU A . n A 1 259 PRO 259 256 256 PRO PRO A . n A 1 260 THR 260 257 257 THR THR A . n A 1 261 LEU 261 258 258 LEU LEU A . n A 1 262 GLU 262 259 259 GLU GLU A . n A 1 263 TYR 263 260 260 TYR TYR A . n A 1 264 ARG 264 261 261 ARG ARG A . n A 1 265 SER 265 262 262 SER SER A . n A 1 266 PRO 266 263 263 PRO PRO A . n A 1 267 ASN 267 264 264 ASN ASN A . n A 1 268 LYS 268 265 265 LYS LYS A . n A 1 269 VAL 269 266 266 VAL VAL A . n A 1 270 TYR 270 267 267 TYR TYR A . n A 1 271 THR 271 268 268 THR THR A . n A 1 272 LEU 272 269 269 LEU LEU A . n A 1 273 GLU 273 270 270 GLU GLU A . n A 1 274 PRO 274 271 271 PRO PRO A . n A 1 275 LYS 275 272 272 LYS LYS A . n A 1 276 GLN 276 273 273 GLN GLN A . n A 1 277 TYR 277 274 274 TYR TYR A . n A 1 278 LEU 278 275 275 LEU LEU A . n A 1 279 GLU 279 276 276 GLU GLU A . n A 1 280 PRO 280 277 277 PRO PRO A . n A 1 281 LEU 281 278 278 LEU LEU A . n A 1 282 GLU 282 278 278 GLU GLU A A n A 1 283 ASN 283 279 279 ASN ASN A . n A 1 284 ILE 284 279 279 ILE ILE A A n A 1 285 PHE 285 279 279 PHE PHE A B n A 1 286 SER 286 279 279 SER SER A C n A 1 287 ALA 287 280 280 ALA ALA A . n A 1 288 LEU 288 281 281 LEU LEU A . n A 1 289 CYS 289 282 282 CYS CYS A . n A 1 290 MET 290 283 283 MET MET A . n A 1 291 LEU 291 284 284 LEU LEU A . n A 1 292 ASN 292 285 285 ASN ASN A . n A 1 293 ILE 293 286 286 ILE ILE A . n A 1 294 VAL 294 287 287 VAL VAL A . n A 1 295 PRO 295 288 288 PRO PRO A . n A 1 296 ILE 296 289 289 ILE ILE A . n A 1 297 ASP 297 290 290 ASP ASP A . n A 1 298 LEU 298 291 291 LEU LEU A . n A 1 299 GLU 299 292 292 GLU GLU A . n A 1 300 LYS 300 296 296 LYS LYS A . n A 1 301 ASN 301 297 297 ASN ASN A . n A 1 302 THR 302 298 298 THR THR A . n A 1 303 PHE 303 299 299 PHE PHE A . n A 1 304 VAL 304 300 300 VAL VAL A . n A 1 305 LEU 305 301 301 LEU LEU A . n A 1 306 GLY 306 302 302 GLY GLY A . n A 1 307 ASP 307 303 303 ASP ASP A . n A 1 308 PRO 308 304 304 PRO PRO A . n A 1 309 PHE 309 305 305 PHE PHE A . n A 1 310 MET 310 306 306 MET MET A . n A 1 311 ARG 311 307 307 ARG ARG A . n A 1 312 LYS 312 308 308 LYS LYS A . n A 1 313 TYR 313 309 309 TYR TYR A . n A 1 314 PHE 314 310 310 PHE PHE A . n A 1 315 THR 315 311 311 THR THR A . n A 1 316 VAL 316 312 312 VAL VAL A . n A 1 317 TYR 317 313 313 TYR TYR A . n A 1 318 ASP 318 314 314 ASP ASP A . n A 1 319 TYR 319 315 315 TYR TYR A . n A 1 320 ASP 320 316 316 ASP ASP A . n A 1 321 ASN 321 317 317 ASN ASN A . n A 1 322 HIS 322 318 318 HIS HIS A . n A 1 323 THR 323 319 319 THR THR A . n A 1 324 VAL 324 320 320 VAL VAL A . n A 1 325 GLY 325 321 321 GLY GLY A . n A 1 326 PHE 326 322 322 PHE PHE A . n A 1 327 ALA 327 323 323 ALA ALA A . n A 1 328 LEU 328 324 324 LEU LEU A . n A 1 329 ALA 329 325 325 ALA ALA A . n A 1 330 LYS 330 326 326 LYS LYS A . n A 1 331 ASN 331 327 ? ? ? A . n A 1 332 LEU 332 328 ? ? ? A . n B 2 1 IVA 1 1 1 IVA IVA I . n B 2 2 VAL 2 2 2 VAL VAL I . n B 2 3 VAL 3 3 3 VAL VAL I . n B 2 4 STA 4 4 4 STA STA I . n B 2 5 ALA 5 5 5 ALA ALA I . n B 2 6 STA 6 6 6 STA STA I . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EDO 1 501 501 EDO EDO A . D 3 EDO 1 502 502 EDO EDO A . E 4 HOH 1 350 350 HOH HOH A . E 4 HOH 2 351 351 HOH HOH A . E 4 HOH 3 353 353 HOH HOH A . E 4 HOH 4 354 354 HOH HOH A . E 4 HOH 5 355 355 HOH HOH A . E 4 HOH 6 356 356 HOH HOH A . E 4 HOH 7 357 357 HOH HOH A . E 4 HOH 8 358 358 HOH HOH A . E 4 HOH 9 365 365 HOH HOH A . # _pdbx_molecule_features.prd_id PRD_000557 _pdbx_molecule_features.name Pepstatin _pdbx_molecule_features.type Oligopeptide _pdbx_molecule_features.class 'Enzyme inhibitor' _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000557 _pdbx_molecule.asym_id B # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 software_defined_assembly PISA tetrameric 4 2 author_defined_assembly ? dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2 A,B,C,D,E 2 1 A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4740 ? 1 MORE -38 ? 1 'SSA (A^2)' 29400 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_555 x-y,-y,-z+1/3 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 52.9000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-05-12 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2013-02-27 4 'Structure model' 1 3 2017-11-01 5 'Structure model' 1 4 2023-09-06 6 'Structure model' 1 5 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Source and taxonomy' 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' Other 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' 9 5 'Structure model' 'Refinement description' 10 6 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_site 8 6 'Structure model' chem_comp_atom 9 6 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.name' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 5 'Structure model' '_struct_site.pdbx_auth_seq_id' 8 6 'Structure model' '_chem_comp_atom.atom_id' 9 6 'Structure model' '_chem_comp_bond.atom_id_2' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined -33.3030 2.9250 5.8120 0.1323 0.3571 0.1418 0.0493 -0.0392 0.0060 2.6238 2.4868 1.8097 -1.0982 -0.9551 -0.5154 0.0472 0.1388 0.2183 -0.1131 -0.0175 0.2229 -0.3612 -0.3921 -0.0297 'X-RAY DIFFRACTION' 2 ? refined -15.5530 -8.8090 11.4790 -0.0160 0.0286 -0.0501 -0.0227 0.0352 0.0423 7.0662 6.1429 6.2190 -0.3590 -0.9189 0.3032 0.1513 -0.9266 -0.0702 0.9243 -0.3093 -0.2010 0.5227 0.2809 0.1579 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 2 ? ? A 210 A ? ? 'X-RAY DIFFRACTION' ? 2 2 A 211 ? ? A 326 A ? ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345 'data collection' . ? 1 MrBUMP phasing . ? 2 REFMAC refinement 5.4.0057 ? 3 XDS 'data reduction' . ? 4 XDS 'data scaling' . ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 VAL _pdbx_validate_close_contact.auth_seq_id_1 312 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 N _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 GLY _pdbx_validate_close_contact.auth_seq_id_2 321 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 NZ A LYS 126 ? ? 1_555 NZ A LYS 162 ? ? 4_455 0.97 2 1 NZ A LYS 126 ? ? 1_555 CE A LYS 162 ? ? 4_455 1.85 3 1 CE A LYS 126 ? ? 1_555 NZ A LYS 162 ? ? 4_455 1.93 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 N A ASP 2 ? ? CA A ASP 2 ? ? 1.580 1.459 0.121 0.020 N 2 1 CA A SER 14 ? ? CB A SER 14 ? ? 1.633 1.525 0.108 0.015 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ILE 107 ? ? CA A ILE 107 ? ? C A ILE 107 ? ? 98.32 111.60 -13.28 2.00 N 2 1 CA A LEU 128 ? ? CB A LEU 128 ? ? CG A LEU 128 ? ? 137.77 115.30 22.47 2.30 N 3 1 CA A LEU 214 ? ? CB A LEU 214 ? ? CG A LEU 214 ? ? 101.04 115.30 -14.26 2.30 N 4 1 C A VAL 240 ? ? N A PRO 241 ? ? CA A PRO 241 ? ? 128.43 119.30 9.13 1.50 Y 5 1 C A LEU 255 ? ? N A PRO 256 ? ? CA A PRO 256 ? ? 128.75 119.30 9.45 1.50 Y 6 1 CA A LEU 281 ? ? CB A LEU 281 ? ? CG A LEU 281 ? ? 97.79 115.30 -17.51 2.30 N 7 1 NE A ARG 307 ? ? CZ A ARG 307 ? ? NH1 A ARG 307 ? ? 124.77 120.30 4.47 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 9 ? ? -103.89 -70.04 2 1 ASN A 11 ? ? 36.86 44.54 3 1 SER A 14 ? ? -154.52 79.63 4 1 SER A 36 ? ? -92.42 -63.74 5 1 GLU A 51 ? ? -29.20 -57.63 6 1 TYR A 64 ? ? -49.93 102.30 7 1 ASP A 67 ? ? -133.56 -49.82 8 1 ASP A 68 ? ? 48.06 26.50 9 1 LYS A 72 ? ? -111.19 72.84 10 1 PRO A 98 ? ? -57.83 105.38 11 1 VAL A 108 ? ? -132.78 -74.06 12 1 SER A 132 ? ? 37.27 59.42 13 1 GLU A 139 ? ? -95.81 57.75 14 1 LEU A 140 ? ? -143.94 -25.10 15 1 ASN A 144 ? ? -43.50 107.84 16 1 LYS A 160 ? ? -131.06 -46.10 17 1 ASN A 161 ? ? -78.19 -166.95 18 1 TRP A 190 ? ? -66.45 72.15 19 1 PHE A 199 ? ? -116.30 -84.49 20 1 PRO A 224 ? ? -43.29 150.68 21 1 ALA A 235 ? ? -63.38 67.37 22 1 PHE A 238 ? ? -127.66 -162.97 23 1 SER A 243 A ? -68.12 87.13 24 1 PRO A 263 ? ? -57.69 3.90 25 1 GLU A 278 A ? -72.24 28.93 26 1 ASN A 279 ? ? 52.83 -125.02 27 1 ASN A 285 ? ? -106.93 43.01 28 1 GLU A 292 ? ? 173.95 -160.00 29 1 VAL I 2 ? ? 17.87 88.19 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 STA _pdbx_validate_peptide_omega.auth_asym_id_1 I _pdbx_validate_peptide_omega.auth_seq_id_1 4 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 ALA _pdbx_validate_peptide_omega.auth_asym_id_2 I _pdbx_validate_peptide_omega.auth_seq_id_2 5 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 148.91 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id STA _pdbx_validate_main_chain_plane.auth_asym_id I _pdbx_validate_main_chain_plane.auth_seq_id 4 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle -14.50 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -5 ? A SER 1 2 1 Y 1 A TYR -4 ? A TYR 2 3 1 Y 1 A LEU -3 ? A LEU 3 4 1 Y 1 A GLY -2 ? A GLY 4 5 1 Y 1 A SER -1 ? A SER 5 6 1 Y 1 A GLU 0 ? A GLU 6 7 1 Y 1 A PHE 1 ? A PHE 7 8 1 Y 1 A ASN 327 ? A ASN 331 9 1 Y 1 A LEU 328 ? A LEU 332 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EDO C1 C N N 88 EDO O1 O N N 89 EDO C2 C N N 90 EDO O2 O N N 91 EDO H11 H N N 92 EDO H12 H N N 93 EDO HO1 H N N 94 EDO H21 H N N 95 EDO H22 H N N 96 EDO HO2 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 HIS N N N N 147 HIS CA C N S 148 HIS C C N N 149 HIS O O N N 150 HIS CB C N N 151 HIS CG C Y N 152 HIS ND1 N Y N 153 HIS CD2 C Y N 154 HIS CE1 C Y N 155 HIS NE2 N Y N 156 HIS OXT O N N 157 HIS H H N N 158 HIS H2 H N N 159 HIS HA H N N 160 HIS HB2 H N N 161 HIS HB3 H N N 162 HIS HD1 H N N 163 HIS HD2 H N N 164 HIS HE1 H N N 165 HIS HE2 H N N 166 HIS HXT H N N 167 HOH O O N N 168 HOH H1 H N N 169 HOH H2 H N N 170 ILE N N N N 171 ILE CA C N S 172 ILE C C N N 173 ILE O O N N 174 ILE CB C N S 175 ILE CG1 C N N 176 ILE CG2 C N N 177 ILE CD1 C N N 178 ILE OXT O N N 179 ILE H H N N 180 ILE H2 H N N 181 ILE HA H N N 182 ILE HB H N N 183 ILE HG12 H N N 184 ILE HG13 H N N 185 ILE HG21 H N N 186 ILE HG22 H N N 187 ILE HG23 H N N 188 ILE HD11 H N N 189 ILE HD12 H N N 190 ILE HD13 H N N 191 ILE HXT H N N 192 IVA CA C N N 193 IVA CB C N N 194 IVA CG1 C N N 195 IVA CG2 C N N 196 IVA C C N N 197 IVA O O N N 198 IVA OXT O N N 199 IVA HA1 H N N 200 IVA HA2 H N N 201 IVA HB H N N 202 IVA HG11 H N N 203 IVA HG12 H N N 204 IVA HG13 H N N 205 IVA HG21 H N N 206 IVA HG22 H N N 207 IVA HG23 H N N 208 IVA HXT H N N 209 LEU N N N N 210 LEU CA C N S 211 LEU C C N N 212 LEU O O N N 213 LEU CB C N N 214 LEU CG C N N 215 LEU CD1 C N N 216 LEU CD2 C N N 217 LEU OXT O N N 218 LEU H H N N 219 LEU H2 H N N 220 LEU HA H N N 221 LEU HB2 H N N 222 LEU HB3 H N N 223 LEU HG H N N 224 LEU HD11 H N N 225 LEU HD12 H N N 226 LEU HD13 H N N 227 LEU HD21 H N N 228 LEU HD22 H N N 229 LEU HD23 H N N 230 LEU HXT H N N 231 LYS N N N N 232 LYS CA C N S 233 LYS C C N N 234 LYS O O N N 235 LYS CB C N N 236 LYS CG C N N 237 LYS CD C N N 238 LYS CE C N N 239 LYS NZ N N N 240 LYS OXT O N N 241 LYS H H N N 242 LYS H2 H N N 243 LYS HA H N N 244 LYS HB2 H N N 245 LYS HB3 H N N 246 LYS HG2 H N N 247 LYS HG3 H N N 248 LYS HD2 H N N 249 LYS HD3 H N N 250 LYS HE2 H N N 251 LYS HE3 H N N 252 LYS HZ1 H N N 253 LYS HZ2 H N N 254 LYS HZ3 H N N 255 LYS HXT H N N 256 MET N N N N 257 MET CA C N S 258 MET C C N N 259 MET O O N N 260 MET CB C N N 261 MET CG C N N 262 MET SD S N N 263 MET CE C N N 264 MET OXT O N N 265 MET H H N N 266 MET H2 H N N 267 MET HA H N N 268 MET HB2 H N N 269 MET HB3 H N N 270 MET HG2 H N N 271 MET HG3 H N N 272 MET HE1 H N N 273 MET HE2 H N N 274 MET HE3 H N N 275 MET HXT H N N 276 PHE N N N N 277 PHE CA C N S 278 PHE C C N N 279 PHE O O N N 280 PHE CB C N N 281 PHE CG C Y N 282 PHE CD1 C Y N 283 PHE CD2 C Y N 284 PHE CE1 C Y N 285 PHE CE2 C Y N 286 PHE CZ C Y N 287 PHE OXT O N N 288 PHE H H N N 289 PHE H2 H N N 290 PHE HA H N N 291 PHE HB2 H N N 292 PHE HB3 H N N 293 PHE HD1 H N N 294 PHE HD2 H N N 295 PHE HE1 H N N 296 PHE HE2 H N N 297 PHE HZ H N N 298 PHE HXT H N N 299 PRO N N N N 300 PRO CA C N S 301 PRO C C N N 302 PRO O O N N 303 PRO CB C N N 304 PRO CG C N N 305 PRO CD C N N 306 PRO OXT O N N 307 PRO H H N N 308 PRO HA H N N 309 PRO HB2 H N N 310 PRO HB3 H N N 311 PRO HG2 H N N 312 PRO HG3 H N N 313 PRO HD2 H N N 314 PRO HD3 H N N 315 PRO HXT H N N 316 SER N N N N 317 SER CA C N S 318 SER C C N N 319 SER O O N N 320 SER CB C N N 321 SER OG O N N 322 SER OXT O N N 323 SER H H N N 324 SER H2 H N N 325 SER HA H N N 326 SER HB2 H N N 327 SER HB3 H N N 328 SER HG H N N 329 SER HXT H N N 330 STA N N N N 331 STA CA C N S 332 STA CB C N N 333 STA CG C N N 334 STA CD1 C N N 335 STA CD2 C N N 336 STA CH C N S 337 STA OH O N N 338 STA CM C N N 339 STA C C N N 340 STA O O N N 341 STA OXT O N N 342 STA H H N N 343 STA H2 H N N 344 STA HA H N N 345 STA HB1 H N N 346 STA HB2 H N N 347 STA HG H N N 348 STA HD11 H N N 349 STA HD12 H N N 350 STA HD13 H N N 351 STA HD21 H N N 352 STA HD22 H N N 353 STA HD23 H N N 354 STA HC H N N 355 STA HH H N N 356 STA HM1 H N N 357 STA HM2 H N N 358 STA HXT H N N 359 THR N N N N 360 THR CA C N S 361 THR C C N N 362 THR O O N N 363 THR CB C N R 364 THR OG1 O N N 365 THR CG2 C N N 366 THR OXT O N N 367 THR H H N N 368 THR H2 H N N 369 THR HA H N N 370 THR HB H N N 371 THR HG1 H N N 372 THR HG21 H N N 373 THR HG22 H N N 374 THR HG23 H N N 375 THR HXT H N N 376 TRP N N N N 377 TRP CA C N S 378 TRP C C N N 379 TRP O O N N 380 TRP CB C N N 381 TRP CG C Y N 382 TRP CD1 C Y N 383 TRP CD2 C Y N 384 TRP NE1 N Y N 385 TRP CE2 C Y N 386 TRP CE3 C Y N 387 TRP CZ2 C Y N 388 TRP CZ3 C Y N 389 TRP CH2 C Y N 390 TRP OXT O N N 391 TRP H H N N 392 TRP H2 H N N 393 TRP HA H N N 394 TRP HB2 H N N 395 TRP HB3 H N N 396 TRP HD1 H N N 397 TRP HE1 H N N 398 TRP HE3 H N N 399 TRP HZ2 H N N 400 TRP HZ3 H N N 401 TRP HH2 H N N 402 TRP HXT H N N 403 TYR N N N N 404 TYR CA C N S 405 TYR C C N N 406 TYR O O N N 407 TYR CB C N N 408 TYR CG C Y N 409 TYR CD1 C Y N 410 TYR CD2 C Y N 411 TYR CE1 C Y N 412 TYR CE2 C Y N 413 TYR CZ C Y N 414 TYR OH O N N 415 TYR OXT O N N 416 TYR H H N N 417 TYR H2 H N N 418 TYR HA H N N 419 TYR HB2 H N N 420 TYR HB3 H N N 421 TYR HD1 H N N 422 TYR HD2 H N N 423 TYR HE1 H N N 424 TYR HE2 H N N 425 TYR HH H N N 426 TYR HXT H N N 427 VAL N N N N 428 VAL CA C N S 429 VAL C C N N 430 VAL O O N N 431 VAL CB C N N 432 VAL CG1 C N N 433 VAL CG2 C N N 434 VAL OXT O N N 435 VAL H H N N 436 VAL H2 H N N 437 VAL HA H N N 438 VAL HB H N N 439 VAL HG11 H N N 440 VAL HG12 H N N 441 VAL HG13 H N N 442 VAL HG21 H N N 443 VAL HG22 H N N 444 VAL HG23 H N N 445 VAL HXT H N N 446 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 ILE N CA sing N N 161 ILE N H sing N N 162 ILE N H2 sing N N 163 ILE CA C sing N N 164 ILE CA CB sing N N 165 ILE CA HA sing N N 166 ILE C O doub N N 167 ILE C OXT sing N N 168 ILE CB CG1 sing N N 169 ILE CB CG2 sing N N 170 ILE CB HB sing N N 171 ILE CG1 CD1 sing N N 172 ILE CG1 HG12 sing N N 173 ILE CG1 HG13 sing N N 174 ILE CG2 HG21 sing N N 175 ILE CG2 HG22 sing N N 176 ILE CG2 HG23 sing N N 177 ILE CD1 HD11 sing N N 178 ILE CD1 HD12 sing N N 179 ILE CD1 HD13 sing N N 180 ILE OXT HXT sing N N 181 IVA CA CB sing N N 182 IVA CA C sing N N 183 IVA CA HA1 sing N N 184 IVA CA HA2 sing N N 185 IVA CB CG1 sing N N 186 IVA CB CG2 sing N N 187 IVA CB HB sing N N 188 IVA CG1 HG11 sing N N 189 IVA CG1 HG12 sing N N 190 IVA CG1 HG13 sing N N 191 IVA CG2 HG21 sing N N 192 IVA CG2 HG22 sing N N 193 IVA CG2 HG23 sing N N 194 IVA C O doub N N 195 IVA C OXT sing N N 196 IVA OXT HXT sing N N 197 LEU N CA sing N N 198 LEU N H sing N N 199 LEU N H2 sing N N 200 LEU CA C sing N N 201 LEU CA CB sing N N 202 LEU CA HA sing N N 203 LEU C O doub N N 204 LEU C OXT sing N N 205 LEU CB CG sing N N 206 LEU CB HB2 sing N N 207 LEU CB HB3 sing N N 208 LEU CG CD1 sing N N 209 LEU CG CD2 sing N N 210 LEU CG HG sing N N 211 LEU CD1 HD11 sing N N 212 LEU CD1 HD12 sing N N 213 LEU CD1 HD13 sing N N 214 LEU CD2 HD21 sing N N 215 LEU CD2 HD22 sing N N 216 LEU CD2 HD23 sing N N 217 LEU OXT HXT sing N N 218 LYS N CA sing N N 219 LYS N H sing N N 220 LYS N H2 sing N N 221 LYS CA C sing N N 222 LYS CA CB sing N N 223 LYS CA HA sing N N 224 LYS C O doub N N 225 LYS C OXT sing N N 226 LYS CB CG sing N N 227 LYS CB HB2 sing N N 228 LYS CB HB3 sing N N 229 LYS CG CD sing N N 230 LYS CG HG2 sing N N 231 LYS CG HG3 sing N N 232 LYS CD CE sing N N 233 LYS CD HD2 sing N N 234 LYS CD HD3 sing N N 235 LYS CE NZ sing N N 236 LYS CE HE2 sing N N 237 LYS CE HE3 sing N N 238 LYS NZ HZ1 sing N N 239 LYS NZ HZ2 sing N N 240 LYS NZ HZ3 sing N N 241 LYS OXT HXT sing N N 242 MET N CA sing N N 243 MET N H sing N N 244 MET N H2 sing N N 245 MET CA C sing N N 246 MET CA CB sing N N 247 MET CA HA sing N N 248 MET C O doub N N 249 MET C OXT sing N N 250 MET CB CG sing N N 251 MET CB HB2 sing N N 252 MET CB HB3 sing N N 253 MET CG SD sing N N 254 MET CG HG2 sing N N 255 MET CG HG3 sing N N 256 MET SD CE sing N N 257 MET CE HE1 sing N N 258 MET CE HE2 sing N N 259 MET CE HE3 sing N N 260 MET OXT HXT sing N N 261 PHE N CA sing N N 262 PHE N H sing N N 263 PHE N H2 sing N N 264 PHE CA C sing N N 265 PHE CA CB sing N N 266 PHE CA HA sing N N 267 PHE C O doub N N 268 PHE C OXT sing N N 269 PHE CB CG sing N N 270 PHE CB HB2 sing N N 271 PHE CB HB3 sing N N 272 PHE CG CD1 doub Y N 273 PHE CG CD2 sing Y N 274 PHE CD1 CE1 sing Y N 275 PHE CD1 HD1 sing N N 276 PHE CD2 CE2 doub Y N 277 PHE CD2 HD2 sing N N 278 PHE CE1 CZ doub Y N 279 PHE CE1 HE1 sing N N 280 PHE CE2 CZ sing Y N 281 PHE CE2 HE2 sing N N 282 PHE CZ HZ sing N N 283 PHE OXT HXT sing N N 284 PRO N CA sing N N 285 PRO N CD sing N N 286 PRO N H sing N N 287 PRO CA C sing N N 288 PRO CA CB sing N N 289 PRO CA HA sing N N 290 PRO C O doub N N 291 PRO C OXT sing N N 292 PRO CB CG sing N N 293 PRO CB HB2 sing N N 294 PRO CB HB3 sing N N 295 PRO CG CD sing N N 296 PRO CG HG2 sing N N 297 PRO CG HG3 sing N N 298 PRO CD HD2 sing N N 299 PRO CD HD3 sing N N 300 PRO OXT HXT sing N N 301 SER N CA sing N N 302 SER N H sing N N 303 SER N H2 sing N N 304 SER CA C sing N N 305 SER CA CB sing N N 306 SER CA HA sing N N 307 SER C O doub N N 308 SER C OXT sing N N 309 SER CB OG sing N N 310 SER CB HB2 sing N N 311 SER CB HB3 sing N N 312 SER OG HG sing N N 313 SER OXT HXT sing N N 314 STA N CA sing N N 315 STA N H sing N N 316 STA N H2 sing N N 317 STA CA CB sing N N 318 STA CA CH sing N N 319 STA CA HA sing N N 320 STA CB CG sing N N 321 STA CB HB1 sing N N 322 STA CB HB2 sing N N 323 STA CG CD1 sing N N 324 STA CG CD2 sing N N 325 STA CG HG sing N N 326 STA CD1 HD11 sing N N 327 STA CD1 HD12 sing N N 328 STA CD1 HD13 sing N N 329 STA CD2 HD21 sing N N 330 STA CD2 HD22 sing N N 331 STA CD2 HD23 sing N N 332 STA CH OH sing N N 333 STA CH CM sing N N 334 STA CH HC sing N N 335 STA OH HH sing N N 336 STA CM C sing N N 337 STA CM HM1 sing N N 338 STA CM HM2 sing N N 339 STA C O doub N N 340 STA C OXT sing N N 341 STA OXT HXT sing N N 342 THR N CA sing N N 343 THR N H sing N N 344 THR N H2 sing N N 345 THR CA C sing N N 346 THR CA CB sing N N 347 THR CA HA sing N N 348 THR C O doub N N 349 THR C OXT sing N N 350 THR CB OG1 sing N N 351 THR CB CG2 sing N N 352 THR CB HB sing N N 353 THR OG1 HG1 sing N N 354 THR CG2 HG21 sing N N 355 THR CG2 HG22 sing N N 356 THR CG2 HG23 sing N N 357 THR OXT HXT sing N N 358 TRP N CA sing N N 359 TRP N H sing N N 360 TRP N H2 sing N N 361 TRP CA C sing N N 362 TRP CA CB sing N N 363 TRP CA HA sing N N 364 TRP C O doub N N 365 TRP C OXT sing N N 366 TRP CB CG sing N N 367 TRP CB HB2 sing N N 368 TRP CB HB3 sing N N 369 TRP CG CD1 doub Y N 370 TRP CG CD2 sing Y N 371 TRP CD1 NE1 sing Y N 372 TRP CD1 HD1 sing N N 373 TRP CD2 CE2 doub Y N 374 TRP CD2 CE3 sing Y N 375 TRP NE1 CE2 sing Y N 376 TRP NE1 HE1 sing N N 377 TRP CE2 CZ2 sing Y N 378 TRP CE3 CZ3 doub Y N 379 TRP CE3 HE3 sing N N 380 TRP CZ2 CH2 doub Y N 381 TRP CZ2 HZ2 sing N N 382 TRP CZ3 CH2 sing Y N 383 TRP CZ3 HZ3 sing N N 384 TRP CH2 HH2 sing N N 385 TRP OXT HXT sing N N 386 TYR N CA sing N N 387 TYR N H sing N N 388 TYR N H2 sing N N 389 TYR CA C sing N N 390 TYR CA CB sing N N 391 TYR CA HA sing N N 392 TYR C O doub N N 393 TYR C OXT sing N N 394 TYR CB CG sing N N 395 TYR CB HB2 sing N N 396 TYR CB HB3 sing N N 397 TYR CG CD1 doub Y N 398 TYR CG CD2 sing Y N 399 TYR CD1 CE1 sing Y N 400 TYR CD1 HD1 sing N N 401 TYR CD2 CE2 doub Y N 402 TYR CD2 HD2 sing N N 403 TYR CE1 CZ doub Y N 404 TYR CE1 HE1 sing N N 405 TYR CE2 CZ sing Y N 406 TYR CE2 HE2 sing N N 407 TYR CZ OH sing N N 408 TYR OH HH sing N N 409 TYR OXT HXT sing N N 410 VAL N CA sing N N 411 VAL N H sing N N 412 VAL N H2 sing N N 413 VAL CA C sing N N 414 VAL CA CB sing N N 415 VAL CA HA sing N N 416 VAL C O doub N N 417 VAL C OXT sing N N 418 VAL CB CG1 sing N N 419 VAL CB CG2 sing N N 420 VAL CB HB sing N N 421 VAL CG1 HG11 sing N N 422 VAL CG1 HG12 sing N N 423 VAL CG1 HG13 sing N N 424 VAL CG2 HG21 sing N N 425 VAL CG2 HG22 sing N N 426 VAL CG2 HG23 sing N N 427 VAL OXT HXT sing N N 428 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 1,2-ETHANEDIOL EDO 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1SME _pdbx_initial_refinement_model.details ? #