HEADER TRANSPORT PROTEIN 03-JAN-09 3FP4 TITLE CRYSTAL STRUCTURE OF TOM71 COMPLEXED WITH SSA1 C-TERMINAL FRAGMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: TPR REPEAT-CONTAINING PROTEIN YHR117W; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 107-639; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: SSA1; COMPND 8 CHAIN: Q; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: YHR117W; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 OTHER_DETAILS: THIS SEQUENCE OCCURS NATURALLY IN YEAST. KEYWDS TOM71, HSP70, MITOCHONDRIA, TRANSLOCATION, CHAPERONE, PHOSPHOPROTEIN, KEYWDS 2 TPR REPEAT, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.LI,X.QIAN,J.HU,B.SHA REVDAT 3 06-SEP-23 3FP4 1 REMARK SEQADV REVDAT 2 10-NOV-09 3FP4 1 JRNL REVDAT 1 28-JUL-09 3FP4 0 JRNL AUTH J.LI,X.QIAN,J.HU,B.SHA JRNL TITL MOLECULAR CHAPERONE HSP70/HSP90 PREPARES THE MITOCHONDRIAL JRNL TITL 2 OUTER MEMBRANE TRANSLOCON RECEPTOR TOM71 FOR PREPROTEIN JRNL TITL 3 LOADING. JRNL REF J.BIOL.CHEM. V. 284 23852 2009 JRNL REFN ISSN 0021-9258 JRNL PMID 19581297 JRNL DOI 10.1074/JBC.M109.023986 REMARK 2 REMARK 2 RESOLUTION. 2.14 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.14 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.4 REMARK 3 NUMBER OF REFLECTIONS : 39166 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2100 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.14 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.19 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2029 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 65.87 REMARK 3 BIN R VALUE (WORKING SET) : 0.2610 REMARK 3 BIN FREE R VALUE SET COUNT : 102 REMARK 3 BIN FREE R VALUE : 0.3530 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3917 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 29 REMARK 3 SOLVENT ATOMS : 264 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : -0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.213 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.199 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.132 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.296 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.933 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.901 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4250 ; 0.023 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5792 ; 1.787 ; 1.982 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 547 ; 6.396 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 209 ;37.120 ;25.598 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 787 ;18.031 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;19.751 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 648 ; 0.127 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3239 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2163 ; 0.227 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2898 ; 0.304 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 248 ; 0.212 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 1 ; 0.111 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 50 ; 0.194 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 18 ; 0.260 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2581 ; 0.993 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4197 ; 1.698 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1692 ; 3.010 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1567 ; 4.522 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3FP4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JAN-09. REMARK 100 THE DEPOSITION ID IS D_1000050866. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-OCT-08 REMARK 200 TEMPERATURE (KELVIN) : 200 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39166 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.140 REMARK 200 RESOLUTION RANGE LOW (A) : 8.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 0.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.14 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 0.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3FP3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG6K, 5% ETHYLENE GLYCO, 0.15M NACL, REMARK 280 TRIS 10MM, PH 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.91000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.32450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 58.01250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 75.32450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.91000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 58.01250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, Q REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 103 REMARK 465 SER A 104 REMARK 465 HIS A 105 REMARK 465 MET A 106 REMARK 465 ASN A 107 REMARK 465 GLY A 108 REMARK 465 LEU A 223 REMARK 465 ASN A 224 REMARK 465 GLY A 225 REMARK 465 ASP A 226 REMARK 465 PHE A 227 REMARK 465 ASP A 228 REMARK 465 GLY A 229 REMARK 465 ALA A 230 REMARK 465 SER A 231 REMARK 465 ILE A 232 REMARK 465 GLU A 233 REMARK 465 SER A 253 REMARK 465 LYS A 254 REMARK 465 ASP A 255 REMARK 465 GLU A 256 REMARK 465 GLY A 257 REMARK 465 ARG A 258 REMARK 465 GLY A 259 REMARK 465 SER A 260 REMARK 465 GLN A 261 REMARK 465 ALA A 333 REMARK 465 ASN A 334 REMARK 465 GLN A 536 REMARK 465 ASP A 537 REMARK 465 PRO A 538 REMARK 465 THR A 539 REMARK 465 GLN A 540 REMARK 465 ASP A 619 REMARK 465 PRO A 620 REMARK 465 ILE A 621 REMARK 465 ILE A 622 REMARK 465 SER A 623 REMARK 465 ALA A 624 REMARK 465 LYS A 625 REMARK 465 MET A 626 REMARK 465 GLU A 627 REMARK 465 LEU A 628 REMARK 465 THR A 629 REMARK 465 LEU A 630 REMARK 465 ALA A 631 REMARK 465 ARG A 632 REMARK 465 TYR A 633 REMARK 465 ARG A 634 REMARK 465 ALA A 635 REMARK 465 LYS A 636 REMARK 465 GLY A 637 REMARK 465 MET A 638 REMARK 465 LEU A 639 REMARK 465 GLY Q 631 REMARK 465 ALA Q 632 REMARK 465 ASP Q 633 REMARK 465 ASN Q 634 REMARK 465 GLY Q 635 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 543 CB - CA - C ANGL. DEV. = -25.8 DEGREES REMARK 500 GLU A 543 N - CA - C ANGL. DEV. = 24.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 141 24.49 48.87 REMARK 500 ASN A 142 75.40 -100.24 REMARK 500 ASN A 142 75.40 -101.64 REMARK 500 ASP A 157 80.24 -161.48 REMARK 500 PRO A 264 -179.91 -60.06 REMARK 500 TYR A 291 -16.99 -140.69 REMARK 500 HIS A 375 88.47 -168.36 REMARK 500 ASN A 408 95.72 -163.04 REMARK 500 LYS A 461 68.96 -112.50 REMARK 500 GLU A 544 -71.25 -59.84 REMARK 500 THR Q 637 -167.37 -121.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 645 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 877 O REMARK 620 2 HOH A 879 O 101.9 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 640 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 641 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 642 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 643 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 644 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 645 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 646 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 647 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 648 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 649 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 650 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 651 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 653 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3FP1 RELATED DB: PDB REMARK 900 RELATED ID: 3FP2 RELATED DB: PDB REMARK 900 RELATED ID: 3FP3 RELATED DB: PDB DBREF 3FP4 A 107 639 UNP P38825 YHR7_YEAST 107 639 DBREF 3FP4 Q 631 642 PDB 3FP4 3FP4 631 642 SEQADV 3FP4 GLY A 103 UNP P38825 EXPRESSION TAG SEQADV 3FP4 SER A 104 UNP P38825 EXPRESSION TAG SEQADV 3FP4 HIS A 105 UNP P38825 EXPRESSION TAG SEQADV 3FP4 MET A 106 UNP P38825 EXPRESSION TAG SEQRES 1 A 537 GLY SER HIS MET ASN GLY GLU PRO ASP ILE ALA GLN LEU SEQRES 2 A 537 LYS GLY LEU SER PRO SER GLN ARG GLN ALA TYR ALA VAL SEQRES 3 A 537 GLN LEU LYS ASN ARG GLY ASN HIS PHE PHE THR ALA LYS SEQRES 4 A 537 ASN PHE ASN GLU ALA ILE LYS TYR TYR GLN TYR ALA ILE SEQRES 5 A 537 GLU LEU ASP PRO ASN GLU PRO VAL PHE TYR SER ASN ILE SEQRES 6 A 537 SER ALA CYS TYR ILE SER THR GLY ASP LEU GLU LYS VAL SEQRES 7 A 537 ILE GLU PHE THR THR LYS ALA LEU GLU ILE LYS PRO ASP SEQRES 8 A 537 HIS SER LYS ALA LEU LEU ARG ARG ALA SER ALA ASN GLU SEQRES 9 A 537 SER LEU GLY ASN PHE THR ASP ALA MET PHE ASP LEU SER SEQRES 10 A 537 VAL LEU SER LEU ASN GLY ASP PHE ASP GLY ALA SER ILE SEQRES 11 A 537 GLU PRO MET LEU GLU ARG ASN LEU ASN LYS GLN ALA MET SEQRES 12 A 537 LYS VAL LEU ASN GLU ASN LEU SER LYS ASP GLU GLY ARG SEQRES 13 A 537 GLY SER GLN VAL LEU PRO SER ASN THR SER LEU ALA SER SEQRES 14 A 537 PHE PHE GLY ILE PHE ASP SER HIS LEU GLU VAL SER SER SEQRES 15 A 537 VAL ASN THR SER SER ASN TYR ASP THR ALA TYR ALA LEU SEQRES 16 A 537 LEU SER ASP ALA LEU GLN ARG LEU TYR SER ALA THR ASP SEQRES 17 A 537 GLU GLY TYR LEU VAL ALA ASN ASP LEU LEU THR LYS SER SEQRES 18 A 537 THR ASP MET TYR HIS SER LEU LEU SER ALA ASN THR VAL SEQRES 19 A 537 ASP ASP PRO LEU ARG GLU ASN ALA ALA LEU ALA LEU CYS SEQRES 20 A 537 TYR THR GLY ILE PHE HIS PHE LEU LYS ASN ASN LEU LEU SEQRES 21 A 537 ASP ALA GLN VAL LEU LEU GLN GLU SER ILE ASN LEU HIS SEQRES 22 A 537 PRO THR PRO ASN SER TYR ILE PHE LEU ALA LEU THR LEU SEQRES 23 A 537 ALA ASP LYS GLU ASN SER GLN GLU PHE PHE LYS PHE PHE SEQRES 24 A 537 GLN LYS ALA VAL ASP LEU ASN PRO GLU TYR PRO PRO THR SEQRES 25 A 537 TYR TYR HIS ARG GLY GLN MET TYR PHE ILE LEU GLN ASP SEQRES 26 A 537 TYR LYS ASN ALA LYS GLU ASP PHE GLN LYS ALA GLN SER SEQRES 27 A 537 LEU ASN PRO GLU ASN VAL TYR PRO TYR ILE GLN LEU ALA SEQRES 28 A 537 CYS LEU LEU TYR LYS GLN GLY LYS PHE THR GLU SER GLU SEQRES 29 A 537 ALA PHE PHE ASN GLU THR LYS LEU LYS PHE PRO THR LEU SEQRES 30 A 537 PRO GLU VAL PRO THR PHE PHE ALA GLU ILE LEU THR ASP SEQRES 31 A 537 ARG GLY ASP PHE ASP THR ALA ILE LYS GLN TYR ASP ILE SEQRES 32 A 537 ALA LYS ARG LEU GLU GLU VAL GLN GLU LYS ILE HIS VAL SEQRES 33 A 537 GLY ILE GLY PRO LEU ILE GLY LYS ALA THR ILE LEU ALA SEQRES 34 A 537 ARG GLN SER SER GLN ASP PRO THR GLN LEU ASP GLU GLU SEQRES 35 A 537 LYS PHE ASN ALA ALA ILE LYS LEU LEU THR LYS ALA CYS SEQRES 36 A 537 GLU LEU ASP PRO ARG SER GLU GLN ALA LYS ILE GLY LEU SEQRES 37 A 537 ALA GLN LEU LYS LEU GLN MET GLU LYS ILE ASP GLU ALA SEQRES 38 A 537 ILE GLU LEU PHE GLU ASP SER ALA ILE LEU ALA ARG THR SEQRES 39 A 537 MET ASP GLU LYS LEU GLN ALA THR THR PHE ALA GLU ALA SEQRES 40 A 537 ALA LYS ILE GLN LYS ARG LEU ARG ALA ASP PRO ILE ILE SEQRES 41 A 537 SER ALA LYS MET GLU LEU THR LEU ALA ARG TYR ARG ALA SEQRES 42 A 537 LYS GLY MET LEU SEQRES 1 Q 12 GLY ALA ASP ASN GLY PRO THR VAL GLU GLU VAL ASP HET CL A 1 1 HET CL A 640 1 HET CL A 641 1 HET CL A 642 1 HET NA A 643 1 HET NA A 644 1 HET NA A 645 1 HET CL A 646 1 HET SO4 A 647 5 HET SO4 A 2 5 HET SO4 A 3 5 HET CL A 648 1 HET CL A 649 1 HET CL A 650 1 HET CL A 651 1 HET CL A 652 1 HET CL A 653 1 HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION HETNAM SO4 SULFATE ION FORMUL 3 CL 11(CL 1-) FORMUL 7 NA 3(NA 1+) FORMUL 11 SO4 3(O4 S 2-) FORMUL 20 HOH *264(H2 O) HELIX 1 1 ASP A 111 GLY A 117 1 7 HELIX 2 2 SER A 119 ALA A 140 1 22 HELIX 3 3 ASN A 142 GLU A 155 1 14 HELIX 4 4 GLU A 160 SER A 173 1 14 HELIX 5 5 ASP A 176 LYS A 191 1 16 HELIX 6 6 HIS A 194 LEU A 208 1 15 HELIX 7 7 ASN A 210 SER A 222 1 13 HELIX 8 8 PRO A 234 LEU A 252 1 19 HELIX 9 9 SER A 265 GLY A 274 1 10 HELIX 10 10 ASP A 277 SER A 284 1 8 HELIX 11 11 ALA A 294 SER A 307 1 14 HELIX 12 12 THR A 309 SER A 332 1 24 HELIX 13 13 ASP A 337 LYS A 358 1 22 HELIX 14 14 ASN A 360 HIS A 375 1 16 HELIX 15 15 THR A 377 LEU A 388 1 12 HELIX 16 16 SER A 394 ASN A 408 1 15 HELIX 17 17 TYR A 411 LEU A 425 1 15 HELIX 18 18 ASP A 427 ASN A 442 1 16 HELIX 19 19 ASN A 445 GLN A 459 1 15 HELIX 20 20 LYS A 461 PHE A 476 1 16 HELIX 21 21 PRO A 480 ARG A 493 1 14 HELIX 22 22 ASP A 495 GLN A 513 1 19 HELIX 23 23 ILE A 520 SER A 534 1 15 HELIX 24 24 ASP A 542 ASP A 560 1 19 HELIX 25 25 SER A 563 MET A 577 1 15 HELIX 26 26 LYS A 579 ALA A 594 1 16 HELIX 27 27 THR A 596 ALA A 618 1 23 LINK O LEU A 252 NA NA A 643 1555 1555 2.58 LINK OG SER A 563 NA NA A 644 1555 1555 3.00 LINK NA NA A 645 O HOH A 877 1555 1555 2.77 LINK NA NA A 645 O HOH A 879 1555 1555 2.30 SITE 1 AC1 6 ARG A 201 ALA A 202 ASN A 205 ASP A 213 SITE 2 AC1 6 ALA A 214 ASP A 217 SITE 1 AC2 4 ASN A 210 PHE A 211 THR A 212 ASP A 213 SITE 1 AC3 3 THR A 212 GLU A 608 ILE A 612 SITE 1 AC4 5 GLN A 439 ASN A 442 ASN A 445 PRO A 448 SITE 2 AC4 5 TYR A 449 SITE 1 AC5 1 LEU A 252 SITE 1 AC6 2 SER A 265 SER A 563 SITE 1 AC7 3 LYS A 515 HOH A 877 HOH A 879 SITE 1 AC8 1 ARG A 201 SITE 1 AC9 4 MET A 215 ALA A 609 ILE A 612 GLN A 613 SITE 1 BC1 4 ASN A 266 ASP A 310 LEU A 314 ARG A 562 SITE 1 BC2 7 GLY A 274 GLU A 444 ASN A 445 VAL A 446 SITE 2 BC2 7 LEU A 479 GLU A 481 HIS A 517 SITE 1 BC3 6 ASN A 286 THR A 287 SER A 288 SER A 289 SITE 2 BC3 6 TYR A 295 ASN A 343 SITE 1 BC4 7 ARG A 304 LEU A 305 SER A 307 ALA A 308 SITE 2 BC4 7 THR A 309 GLY A 312 TYR A 313 SITE 1 BC5 4 ASN A 317 THR A 321 PHE A 354 HOH A 673 SITE 1 BC6 1 LEU A 374 SITE 1 BC7 5 LYS A 473 PHE A 476 LEU A 479 VAL A 482 SITE 2 BC7 5 HOH A 864 CRYST1 47.820 116.025 150.649 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020912 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008619 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006638 0.00000