HEADER BIOSYNTHETIC PROTEIN, TRANSFERASE 05-JAN-09 3FPG TITLE CRYSTAL STRUCTURE OF E81Q MUTANT OF MTNAS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MTNAS; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOTHERMOBACTER THERMAUTOTROPHICUS; SOURCE 3 ORGANISM_TAXID: 187420; SOURCE 4 GENE: MTH675; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET101 KEYWDS THERMONICOTIANAMINE, NICOTIANAMINE, BIOSYNTHETIC PROTEIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.DREYFUS,D.PIGNOL,P.ARNOUX REVDAT 4 01-NOV-23 3FPG 1 REMARK REVDAT 3 10-NOV-21 3FPG 1 REMARK SEQADV REVDAT 2 08-DEC-10 3FPG 1 JRNL REVDAT 1 06-OCT-09 3FPG 0 JRNL AUTH C.DREYFUS,D.LEMAIRE,S.MARI,D.PIGNOL,P.ARNOUX JRNL TITL CRYSTALLOGRAPHIC SNAPSHOTS OF ITERATIVE SUBSTRATE JRNL TITL 2 TRANSLOCATIONS DURING NICOTIANAMINE SYNTHESIS IN ARCHAEA JRNL REF PROC.NATL.ACAD.SCI.USA V. 106 16180 2009 JRNL REFN ISSN 0027-8424 JRNL PMID 19805277 JRNL DOI 10.1073/PNAS.0904439106 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.39 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 82.6 REMARK 3 NUMBER OF REFLECTIONS : 36177 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1850 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2603 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.06 REMARK 3 BIN R VALUE (WORKING SET) : 0.2160 REMARK 3 BIN FREE R VALUE SET COUNT : 145 REMARK 3 BIN FREE R VALUE : 0.3130 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4222 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 537 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.06000 REMARK 3 B22 (A**2) : 0.19000 REMARK 3 B33 (A**2) : -0.24000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.235 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.207 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.123 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.265 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.939 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.899 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4326 ; 0.020 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5851 ; 1.692 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 526 ; 5.528 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 204 ;37.383 ;23.039 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 760 ;18.098 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 40 ;17.321 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 654 ; 0.129 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3250 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2225 ; 0.259 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3025 ; 0.321 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 385 ; 0.231 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 93 ; 0.661 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 31 ; 0.322 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2686 ; 1.324 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4252 ; 1.899 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1827 ; 3.578 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1599 ; 5.040 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3FPG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-JAN-09. REMARK 100 THE DEPOSITION ID IS D_1000050878. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96850 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.25 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36210 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 67.574 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 83.9 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.12700 REMARK 200 R SYM (I) : 0.12700 REMARK 200 FOR THE DATA SET : 4.5740 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.55400 REMARK 200 R SYM FOR SHELL (I) : 0.55400 REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3FPE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 200MM NAK TARTRATE, REMARK 280 100MM BISTRISPROPANE, PH 8.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.84800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.82600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.74900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 73.82600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.84800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.74900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 266 REMARK 465 LYS A 267 REMARK 465 GLY A 268 REMARK 465 GLU A 269 REMARK 465 LEU A 270 REMARK 465 ASN A 271 REMARK 465 SER A 272 REMARK 465 LYS A 273 REMARK 465 LEU A 274 REMARK 465 GLU A 275 REMARK 465 GLY A 276 REMARK 465 LYS A 277 REMARK 465 PRO A 278 REMARK 465 ILE A 279 REMARK 465 PRO A 280 REMARK 465 ASN A 281 REMARK 465 PRO A 282 REMARK 465 LEU A 283 REMARK 465 LEU A 284 REMARK 465 GLY A 285 REMARK 465 LEU A 286 REMARK 465 ASP A 287 REMARK 465 SER A 288 REMARK 465 THR A 289 REMARK 465 ARG A 290 REMARK 465 THR A 291 REMARK 465 GLY A 292 REMARK 465 HIS A 293 REMARK 465 HIS A 294 REMARK 465 HIS A 295 REMARK 465 HIS A 296 REMARK 465 HIS A 297 REMARK 465 HIS A 298 REMARK 465 MET B 1 REMARK 465 ASP B 266 REMARK 465 LYS B 267 REMARK 465 GLY B 268 REMARK 465 GLU B 269 REMARK 465 LEU B 270 REMARK 465 ASN B 271 REMARK 465 SER B 272 REMARK 465 LYS B 273 REMARK 465 LEU B 274 REMARK 465 GLU B 275 REMARK 465 GLY B 276 REMARK 465 LYS B 277 REMARK 465 PRO B 278 REMARK 465 ILE B 279 REMARK 465 PRO B 280 REMARK 465 ASN B 281 REMARK 465 PRO B 282 REMARK 465 LEU B 283 REMARK 465 LEU B 284 REMARK 465 GLY B 285 REMARK 465 LEU B 286 REMARK 465 ASP B 287 REMARK 465 SER B 288 REMARK 465 THR B 289 REMARK 465 ARG B 290 REMARK 465 THR B 291 REMARK 465 GLY B 292 REMARK 465 HIS B 293 REMARK 465 HIS B 294 REMARK 465 HIS B 295 REMARK 465 HIS B 296 REMARK 465 HIS B 297 REMARK 465 HIS B 298 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 455 O HOH A 556 1.69 REMARK 500 O2 B3P B 300 O HOH B 525 1.79 REMARK 500 CD PRO A 265 O HOH A 358 1.84 REMARK 500 NH1 ARG A 244 O HOH A 355 2.08 REMARK 500 OD1 ASP B 236 O HOH B 308 2.11 REMARK 500 OE2 GLU A 199 OH TYR A 231 2.11 REMARK 500 NZ LYS A 54 OD2 ASP A 58 2.12 REMARK 500 O HOH B 311 O HOH B 526 2.13 REMARK 500 C2 B3P B 300 O HOH B 497 2.16 REMARK 500 OD1 ASN B 113 O HOH B 356 2.17 REMARK 500 O PRO A 265 O HOH A 509 2.17 REMARK 500 CB ASP B 92 O HOH B 537 2.17 REMARK 500 O HOH B 426 O HOH B 523 2.17 REMARK 500 O HOH B 432 O HOH B 437 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CD1 TRP A 95 NZ LYS B 112 4545 1.36 REMARK 500 C3 B3P B 300 O HOH A 542 2455 1.57 REMARK 500 C1 B3P B 300 O HOH A 542 2455 1.82 REMARK 500 O HOH A 325 O HOH B 373 1655 1.83 REMARK 500 O HOH A 561 O HOH B 525 2454 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS A 71 CE LYS A 71 NZ -0.171 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 210 NE - CZ - NH1 ANGL. DEV. = 5.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 3 46.52 -145.45 REMARK 500 TYR A 22 -1.89 70.17 REMARK 500 CYS B 3 34.50 -148.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR A 299 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE B3P B 300 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3FPE RELATED DB: PDB REMARK 900 MTNAS IN COMPLEX WITH THERMONICOTIANAMINE REMARK 900 RELATED ID: 3FPF RELATED DB: PDB REMARK 900 MTNAS IN COMPLEX WITH MTA AND TNA REMARK 900 RELATED ID: 3FPH RELATED DB: PDB REMARK 900 E81Q MUTANT OF MTNAS IN COMPLEX WITH L-GLUTAMATE REMARK 900 RELATED ID: 3FPJ RELATED DB: PDB REMARK 900 E81Q MUTANT OF MTNAS IN COMPLEX WITH S-ADENOSYLMETHIONINE DBREF 3FPG A 1 266 UNP O26771 O26771_METTH 1 266 DBREF 3FPG B 1 266 UNP O26771 O26771_METTH 1 266 SEQADV 3FPG GLN A 81 UNP O26771 GLU 81 ENGINEERED MUTATION SEQADV 3FPG LYS A 267 UNP O26771 EXPRESSION TAG SEQADV 3FPG GLY A 268 UNP O26771 EXPRESSION TAG SEQADV 3FPG GLU A 269 UNP O26771 EXPRESSION TAG SEQADV 3FPG LEU A 270 UNP O26771 EXPRESSION TAG SEQADV 3FPG ASN A 271 UNP O26771 EXPRESSION TAG SEQADV 3FPG SER A 272 UNP O26771 EXPRESSION TAG SEQADV 3FPG LYS A 273 UNP O26771 EXPRESSION TAG SEQADV 3FPG LEU A 274 UNP O26771 EXPRESSION TAG SEQADV 3FPG GLU A 275 UNP O26771 EXPRESSION TAG SEQADV 3FPG GLY A 276 UNP O26771 EXPRESSION TAG SEQADV 3FPG LYS A 277 UNP O26771 EXPRESSION TAG SEQADV 3FPG PRO A 278 UNP O26771 EXPRESSION TAG SEQADV 3FPG ILE A 279 UNP O26771 EXPRESSION TAG SEQADV 3FPG PRO A 280 UNP O26771 EXPRESSION TAG SEQADV 3FPG ASN A 281 UNP O26771 EXPRESSION TAG SEQADV 3FPG PRO A 282 UNP O26771 EXPRESSION TAG SEQADV 3FPG LEU A 283 UNP O26771 EXPRESSION TAG SEQADV 3FPG LEU A 284 UNP O26771 EXPRESSION TAG SEQADV 3FPG GLY A 285 UNP O26771 EXPRESSION TAG SEQADV 3FPG LEU A 286 UNP O26771 EXPRESSION TAG SEQADV 3FPG ASP A 287 UNP O26771 EXPRESSION TAG SEQADV 3FPG SER A 288 UNP O26771 EXPRESSION TAG SEQADV 3FPG THR A 289 UNP O26771 EXPRESSION TAG SEQADV 3FPG ARG A 290 UNP O26771 EXPRESSION TAG SEQADV 3FPG THR A 291 UNP O26771 EXPRESSION TAG SEQADV 3FPG GLY A 292 UNP O26771 EXPRESSION TAG SEQADV 3FPG HIS A 293 UNP O26771 EXPRESSION TAG SEQADV 3FPG HIS A 294 UNP O26771 EXPRESSION TAG SEQADV 3FPG HIS A 295 UNP O26771 EXPRESSION TAG SEQADV 3FPG HIS A 296 UNP O26771 EXPRESSION TAG SEQADV 3FPG HIS A 297 UNP O26771 EXPRESSION TAG SEQADV 3FPG HIS A 298 UNP O26771 EXPRESSION TAG SEQADV 3FPG GLN B 81 UNP O26771 GLU 81 ENGINEERED MUTATION SEQADV 3FPG LYS B 267 UNP O26771 EXPRESSION TAG SEQADV 3FPG GLY B 268 UNP O26771 EXPRESSION TAG SEQADV 3FPG GLU B 269 UNP O26771 EXPRESSION TAG SEQADV 3FPG LEU B 270 UNP O26771 EXPRESSION TAG SEQADV 3FPG ASN B 271 UNP O26771 EXPRESSION TAG SEQADV 3FPG SER B 272 UNP O26771 EXPRESSION TAG SEQADV 3FPG LYS B 273 UNP O26771 EXPRESSION TAG SEQADV 3FPG LEU B 274 UNP O26771 EXPRESSION TAG SEQADV 3FPG GLU B 275 UNP O26771 EXPRESSION TAG SEQADV 3FPG GLY B 276 UNP O26771 EXPRESSION TAG SEQADV 3FPG LYS B 277 UNP O26771 EXPRESSION TAG SEQADV 3FPG PRO B 278 UNP O26771 EXPRESSION TAG SEQADV 3FPG ILE B 279 UNP O26771 EXPRESSION TAG SEQADV 3FPG PRO B 280 UNP O26771 EXPRESSION TAG SEQADV 3FPG ASN B 281 UNP O26771 EXPRESSION TAG SEQADV 3FPG PRO B 282 UNP O26771 EXPRESSION TAG SEQADV 3FPG LEU B 283 UNP O26771 EXPRESSION TAG SEQADV 3FPG LEU B 284 UNP O26771 EXPRESSION TAG SEQADV 3FPG GLY B 285 UNP O26771 EXPRESSION TAG SEQADV 3FPG LEU B 286 UNP O26771 EXPRESSION TAG SEQADV 3FPG ASP B 287 UNP O26771 EXPRESSION TAG SEQADV 3FPG SER B 288 UNP O26771 EXPRESSION TAG SEQADV 3FPG THR B 289 UNP O26771 EXPRESSION TAG SEQADV 3FPG ARG B 290 UNP O26771 EXPRESSION TAG SEQADV 3FPG THR B 291 UNP O26771 EXPRESSION TAG SEQADV 3FPG GLY B 292 UNP O26771 EXPRESSION TAG SEQADV 3FPG HIS B 293 UNP O26771 EXPRESSION TAG SEQADV 3FPG HIS B 294 UNP O26771 EXPRESSION TAG SEQADV 3FPG HIS B 295 UNP O26771 EXPRESSION TAG SEQADV 3FPG HIS B 296 UNP O26771 EXPRESSION TAG SEQADV 3FPG HIS B 297 UNP O26771 EXPRESSION TAG SEQADV 3FPG HIS B 298 UNP O26771 EXPRESSION TAG SEQRES 1 A 298 MET SER CYS TYR ILE TYR TRP ASP LYS ILE LYS ARG ILE SEQRES 2 A 298 ALA SER ARG LEU GLU GLY MET ASN TYR HIS PHE ASP GLU SEQRES 3 A 298 MET ASP THR SER GLY VAL MET PRO LEU LEU ASP GLU ILE SEQRES 4 A 298 GLU GLU ILE ALA HIS ASP SER THR ILE ASP PHE GLU SER SEQRES 5 A 298 ALA LYS HIS ILE LEU ASP ASP ALA GLU MET ASN HIS ALA SEQRES 6 A 298 LEU SER LEU ILE ARG LYS PHE TYR VAL ASN LEU GLY MET SEQRES 7 A 298 LYS LEU GLN MET GLU LYS ALA GLN GLU VAL ILE GLU SER SEQRES 8 A 298 ASP SER PRO TRP GLU THR LEU ARG SER PHE TYR PHE TYR SEQRES 9 A 298 PRO ARG TYR LEU GLU LEU LEU LYS ASN GLU ALA ALA LEU SEQRES 10 A 298 GLY ARG PHE ARG ARG GLY GLU ARG ALA VAL PHE ILE GLY SEQRES 11 A 298 GLY GLY PRO LEU PRO LEU THR GLY ILE LEU LEU SER HIS SEQRES 12 A 298 VAL TYR GLY MET ARG VAL ASN VAL VAL GLU ILE GLU PRO SEQRES 13 A 298 ASP ILE ALA GLU LEU SER ARG LYS VAL ILE GLU GLY LEU SEQRES 14 A 298 GLY VAL ASP GLY VAL ASN VAL ILE THR GLY ASP GLU THR SEQRES 15 A 298 VAL ILE ASP GLY LEU GLU PHE ASP VAL LEU MET VAL ALA SEQRES 16 A 298 ALA LEU ALA GLU PRO LYS ARG ARG VAL PHE ARG ASN ILE SEQRES 17 A 298 HIS ARG TYR VAL ASP THR GLU THR ARG ILE ILE TYR ARG SEQRES 18 A 298 THR TYR THR GLY MET ARG ALA ILE LEU TYR ALA PRO VAL SEQRES 19 A 298 SER ASP ASP ASP ILE THR GLY PHE ARG ARG ALA GLY VAL SEQRES 20 A 298 VAL LEU PRO SER GLY LYS VAL ASN ASN THR SER VAL LEU SEQRES 21 A 298 VAL PHE LYS CYS PRO ASP LYS GLY GLU LEU ASN SER LYS SEQRES 22 A 298 LEU GLU GLY LYS PRO ILE PRO ASN PRO LEU LEU GLY LEU SEQRES 23 A 298 ASP SER THR ARG THR GLY HIS HIS HIS HIS HIS HIS SEQRES 1 B 298 MET SER CYS TYR ILE TYR TRP ASP LYS ILE LYS ARG ILE SEQRES 2 B 298 ALA SER ARG LEU GLU GLY MET ASN TYR HIS PHE ASP GLU SEQRES 3 B 298 MET ASP THR SER GLY VAL MET PRO LEU LEU ASP GLU ILE SEQRES 4 B 298 GLU GLU ILE ALA HIS ASP SER THR ILE ASP PHE GLU SER SEQRES 5 B 298 ALA LYS HIS ILE LEU ASP ASP ALA GLU MET ASN HIS ALA SEQRES 6 B 298 LEU SER LEU ILE ARG LYS PHE TYR VAL ASN LEU GLY MET SEQRES 7 B 298 LYS LEU GLN MET GLU LYS ALA GLN GLU VAL ILE GLU SER SEQRES 8 B 298 ASP SER PRO TRP GLU THR LEU ARG SER PHE TYR PHE TYR SEQRES 9 B 298 PRO ARG TYR LEU GLU LEU LEU LYS ASN GLU ALA ALA LEU SEQRES 10 B 298 GLY ARG PHE ARG ARG GLY GLU ARG ALA VAL PHE ILE GLY SEQRES 11 B 298 GLY GLY PRO LEU PRO LEU THR GLY ILE LEU LEU SER HIS SEQRES 12 B 298 VAL TYR GLY MET ARG VAL ASN VAL VAL GLU ILE GLU PRO SEQRES 13 B 298 ASP ILE ALA GLU LEU SER ARG LYS VAL ILE GLU GLY LEU SEQRES 14 B 298 GLY VAL ASP GLY VAL ASN VAL ILE THR GLY ASP GLU THR SEQRES 15 B 298 VAL ILE ASP GLY LEU GLU PHE ASP VAL LEU MET VAL ALA SEQRES 16 B 298 ALA LEU ALA GLU PRO LYS ARG ARG VAL PHE ARG ASN ILE SEQRES 17 B 298 HIS ARG TYR VAL ASP THR GLU THR ARG ILE ILE TYR ARG SEQRES 18 B 298 THR TYR THR GLY MET ARG ALA ILE LEU TYR ALA PRO VAL SEQRES 19 B 298 SER ASP ASP ASP ILE THR GLY PHE ARG ARG ALA GLY VAL SEQRES 20 B 298 VAL LEU PRO SER GLY LYS VAL ASN ASN THR SER VAL LEU SEQRES 21 B 298 VAL PHE LYS CYS PRO ASP LYS GLY GLU LEU ASN SER LYS SEQRES 22 B 298 LEU GLU GLY LYS PRO ILE PRO ASN PRO LEU LEU GLY LEU SEQRES 23 B 298 ASP SER THR ARG THR GLY HIS HIS HIS HIS HIS HIS HET BR A 299 1 HET B3P B 300 19 HETNAM BR BROMIDE ION HETNAM B3P 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)- HETNAM 2 B3P PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL FORMUL 3 BR BR 1- FORMUL 4 B3P C11 H26 N2 O6 FORMUL 5 HOH *537(H2 O) HELIX 1 1 TYR A 4 ARG A 16 1 13 HELIX 2 2 LEU A 17 ASN A 21 5 5 HELIX 3 3 HIS A 23 MET A 27 5 5 HELIX 4 4 VAL A 32 HIS A 44 1 13 HELIX 5 5 ASP A 49 ASP A 58 1 10 HELIX 6 6 ASP A 59 GLU A 61 5 3 HELIX 7 7 MET A 62 SER A 91 1 30 HELIX 8 8 SER A 93 SER A 100 1 8 HELIX 9 9 PHE A 103 ARG A 119 1 17 HELIX 10 10 PRO A 135 VAL A 144 1 10 HELIX 11 11 GLU A 155 GLY A 170 1 16 HELIX 12 12 ASP A 180 LEU A 187 5 8 HELIX 13 13 PRO A 200 VAL A 212 1 13 HELIX 14 14 THR A 224 LEU A 230 5 7 HELIX 15 15 ASP A 236 THR A 240 5 5 HELIX 16 16 TYR B 4 PHE B 24 1 21 HELIX 17 17 VAL B 32 ASP B 45 1 14 HELIX 18 18 ASP B 49 ASP B 58 1 10 HELIX 19 19 ASP B 59 GLU B 61 5 3 HELIX 20 20 MET B 62 SER B 91 1 30 HELIX 21 21 SER B 93 SER B 100 1 8 HELIX 22 22 PHE B 103 GLY B 118 1 16 HELIX 23 23 PRO B 135 VAL B 144 1 10 HELIX 24 24 GLU B 155 LEU B 169 1 15 HELIX 25 25 ASP B 180 LEU B 187 5 8 HELIX 26 26 PRO B 200 VAL B 212 1 13 HELIX 27 27 THR B 224 LEU B 230 5 7 SHEET 1 A 7 VAL A 174 THR A 178 0 SHEET 2 A 7 ARG A 148 GLU A 153 1 N VAL A 151 O ILE A 177 SHEET 3 A 7 ARG A 125 ILE A 129 1 N ALA A 126 O ARG A 148 SHEET 4 A 7 VAL A 191 VAL A 194 1 O MET A 193 N ILE A 129 SHEET 5 A 7 ARG A 217 THR A 222 1 O ARG A 217 N LEU A 192 SHEET 6 A 7 THR A 257 LYS A 263 -1 O VAL A 261 N ILE A 218 SHEET 7 A 7 PHE A 242 VAL A 248 -1 N VAL A 248 O SER A 258 SHEET 1 B 7 VAL B 174 THR B 178 0 SHEET 2 B 7 ARG B 148 GLU B 153 1 N VAL B 151 O ASN B 175 SHEET 3 B 7 ARG B 125 ILE B 129 1 N PHE B 128 O VAL B 152 SHEET 4 B 7 VAL B 191 VAL B 194 1 O MET B 193 N ILE B 129 SHEET 5 B 7 ARG B 217 THR B 222 1 O ILE B 219 N LEU B 192 SHEET 6 B 7 THR B 257 LYS B 263 -1 O VAL B 261 N ILE B 218 SHEET 7 B 7 PHE B 242 VAL B 248 -1 N ALA B 245 O LEU B 260 SSBOND 1 CYS A 3 CYS B 264 1555 1555 2.11 SSBOND 2 CYS A 264 CYS B 3 1555 1555 1.94 CISPEP 1 GLU A 199 PRO A 200 0 -2.16 CISPEP 2 CYS A 264 PRO A 265 0 -10.42 CISPEP 3 GLU B 199 PRO B 200 0 -10.61 CISPEP 4 CYS B 264 PRO B 265 0 6.71 SITE 1 AC1 1 ARG B 244 SITE 1 AC2 11 GLU A 188 HOH A 542 LEU B 187 GLU B 188 SITE 2 AC2 11 PHE B 189 TYR B 211 VAL B 212 ASP B 213 SITE 3 AC2 11 THR B 216 HOH B 497 HOH B 525 CRYST1 63.696 67.498 147.652 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015700 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014815 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006773 0.00000