data_3FR1 # _entry.id 3FR1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3FR1 pdb_00003fr1 10.2210/pdb3fr1/pdb RCSB RCSB050935 ? ? WWPDB D_1000050935 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-06-30 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 1 3 2024-02-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 3 'Structure model' 'Source and taxonomy' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_entity_src_syn 2 3 'Structure model' software 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' database_2 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_entity_src_syn.details' 2 3 'Structure model' '_pdbx_entity_src_syn.ncbi_taxonomy_id' 3 3 'Structure model' '_pdbx_entity_src_syn.organism_common_name' 4 3 'Structure model' '_pdbx_entity_src_syn.organism_scientific' 5 4 'Structure model' '_database_2.pdbx_DOI' 6 4 'Structure model' '_database_2.pdbx_database_accession' 7 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 8 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 9 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 3FR1 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-01-08 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3FQP . unspecified PDB 3FTH . unspecified PDB 3FTK . unspecified PDB 3FTL . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wiltzius, J.J.W.' 1 'Sawaya, M.R.' 2 'Eisenberg, D.' 3 # _citation.id primary _citation.title 'Molecular mechanisms for protein-encoded inheritance' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 16 _citation.page_first 973 _citation.page_last 978 _citation.year 2009 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19684598 _citation.pdbx_database_id_DOI 10.1038/nsmb.1643 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wiltzius, J.J.' 1 ? primary 'Landau, M.' 2 ? primary 'Nelson, R.' 3 ? primary 'Sawaya, M.R.' 4 ? primary 'Apostol, M.I.' 5 ? primary 'Goldschmidt, L.' 6 ? primary 'Soriaga, A.B.' 7 ? primary 'Cascio, D.' 8 ? primary 'Rajashankar, K.' 9 ? primary 'Eisenberg, D.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Islet amyloid polypeptide' 716.805 1 ? ? 'sequence database residues 47-52' ? 2 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 3 water nat water 18.015 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Amylin, Diabetes-associated peptide, DAP, Insulinoma amyloid peptide' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code NFLVHS _entity_poly.pdbx_seq_one_letter_code_can NFLVHS _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 PHE n 1 3 LEU n 1 4 VAL n 1 5 HIS n 1 6 SER n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name Human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 1 1 ASN ASN A . n A 1 2 PHE 2 2 2 PHE PHE A . n A 1 3 LEU 3 3 3 LEU LEU A . n A 1 4 VAL 4 4 4 VAL VAL A . n A 1 5 HIS 5 5 5 HIS HIS A . n A 1 6 SER 6 6 6 SER SER A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL 1 7 2 CL CL A . C 3 HOH 1 8 1 HOH HOH A . # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 6 # _cell.length_a 11.480 _cell.length_b 9.552 _cell.length_c 38.582 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3FR1 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 3FR1 _symmetry.Int_Tables_number 19 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3FR1 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 1.475554 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 16.641487 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details '0.18M MgCl2, 0.09M HEPES pH 7.5, 27% isopropanol, and 10% glycerol, vapor diffusion, hanging drop, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2008-04-18 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-E # _reflns.entry_id 3FR1 _reflns.d_resolution_high 1.850 _reflns.d_resolution_low 90.000 _reflns.number_obs 434 _reflns.pdbx_Rmerge_I_obs 0.183 _reflns.pdbx_chi_squared 0.992 _reflns.pdbx_redundancy 5.400 _reflns.percent_possible_obs 93.900 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3 _reflns.number_all 434 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 21.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_netI_over_sigmaI ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 1.85 1.99 ? ? ? 0.419 ? ? 0.705 6.20 ? 68 82.90 ? 1 1.99 2.19 ? ? ? 0.258 ? ? 1.028 5.80 ? 85 97.70 ? 2 2.19 2.51 ? ? ? 0.292 ? ? 1.070 5.10 ? 86 92.50 ? 3 2.51 3.16 ? ? ? 0.171 ? ? 1.048 5.60 ? 88 97.80 ? 4 3.16 90.00 ? ? ? 0.138 ? ? 1.088 4.60 ? 107 97.30 ? 5 # _refine.entry_id 3FR1 _refine.ls_d_res_high 1.850 _refine.ls_d_res_low 11.00 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 94.620 _refine.ls_number_reflns_obs 422 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_obs 0.196 _refine.ls_R_factor_R_work 0.192 _refine.ls_wR_factor_R_work 0.199 _refine.ls_R_factor_R_free 0.232 _refine.ls_wR_factor_R_free 0.257 _refine.ls_percent_reflns_R_free 10.200 _refine.ls_number_reflns_R_free 43 _refine.B_iso_mean 14.911 _refine.aniso_B[1][1] -1.070 _refine.aniso_B[2][2] -1.190 _refine.aniso_B[3][3] 2.270 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.963 _refine.correlation_coeff_Fo_to_Fc_free 0.938 _refine.overall_SU_R_Cruickshank_DPI 0.216 _refine.overall_SU_R_free 0.171 _refine.pdbx_overall_ESU_R 0.216 _refine.pdbx_overall_ESU_R_Free 0.171 _refine.overall_SU_ML 0.100 _refine.overall_SU_B 3.496 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.overall_FOM_work_R_set 0.838 _refine.B_iso_max 69.65 _refine.B_iso_min 7.88 _refine.occupancy_max 1.00 _refine.occupancy_min 1.00 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 51 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 1 _refine_hist.number_atoms_total 53 _refine_hist.d_res_high 1.850 _refine_hist.d_res_low 11.00 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 52 0.005 0.021 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 30 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 70 0.608 1.889 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 73 0.546 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5 1.805 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 3 10.516 23.333 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 7 11.831 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 8 0.046 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 56 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 12 0.000 0.020 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 30 1.476 2.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 11 0.369 2.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 48 2.491 3.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 22 1.299 2.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 22 2.051 3.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.85 _refine_ls_shell.d_res_low 1.899 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 75.680 _refine_ls_shell.number_reflns_R_work 24 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.295 _refine_ls_shell.R_factor_R_free 0.269 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 4 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 28 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3FR1 _struct.title 'NFLVHS segment from Islet Amyloid Polypeptide (IAPP or Amylin)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3FR1 _struct_keywords.text 'amyloid-like protofibril, Amidation, Amyloid, Cleavage on pair of basic residues, Hormone, Polymorphism, Secreted, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code IAPP_HUMAN _struct_ref.pdbx_db_accession P10997 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code NFLVHS _struct_ref.pdbx_align_begin 47 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3FR1 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 6 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P10997 _struct_ref_seq.db_align_beg 47 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 52 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 6 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_defined_assembly ? dimeric 2 3 software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2 A,B,C 2 3,4 A,B,C 3 1 A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_554 -x,y+1/2,-z-1/2 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4.7760000000 0.0000000000 0.0000000000 -1.0000000000 -19.2910000000 3 'crystal symmetry operation' 1_655 x+1,y,z 1.0000000000 0.0000000000 0.0000000000 11.4800000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 3_654 -x+1,y+1/2,-z-1/2 -1.0000000000 0.0000000000 0.0000000000 11.4800000000 0.0000000000 1.0000000000 0.0000000000 4.7760000000 0.0000000000 0.0000000000 -1.0000000000 -19.2910000000 # _struct_biol.id 1 _struct_biol.details ;THE BIOLOGICAL UNIT IS A PAIR OF BETA SHEETS. ONE SHEET IS CONSTRUCTED FROM CHAIN A AND A CRYSTALLOGRAPHIC SYMMETRY OPERATOR (I.E. X,Y,Z AND -X,1/2+Y,-1/2-Z). THE SECOND SHEET IS CONSTRUCTED FROM X+1,Y,Z AND 1-X,1/2+Y,-1/2-Z. ; # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id CL _struct_site.pdbx_auth_seq_id 7 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE CL A 7' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 ASN A 1 ? ASN A 1 . ? 2_455 ? 2 AC1 4 ASN A 1 ? ASN A 1 . ? 3_544 ? 3 AC1 4 LEU A 3 ? LEU A 3 . ? 3_444 ? 4 AC1 4 HIS A 5 ? HIS A 5 . ? 1_555 ? # _pdbx_phasing_MR.entry_id 3FR1 _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation ? _pdbx_phasing_MR.d_res_low_rotation ? _pdbx_phasing_MR.d_res_high_translation ? _pdbx_phasing_MR.d_res_low_translation ? _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ASN N N N N 1 ASN CA C N S 2 ASN C C N N 3 ASN O O N N 4 ASN CB C N N 5 ASN CG C N N 6 ASN OD1 O N N 7 ASN ND2 N N N 8 ASN OXT O N N 9 ASN H H N N 10 ASN H2 H N N 11 ASN HA H N N 12 ASN HB2 H N N 13 ASN HB3 H N N 14 ASN HD21 H N N 15 ASN HD22 H N N 16 ASN HXT H N N 17 CL CL CL N N 18 HIS N N N N 19 HIS CA C N S 20 HIS C C N N 21 HIS O O N N 22 HIS CB C N N 23 HIS CG C Y N 24 HIS ND1 N Y N 25 HIS CD2 C Y N 26 HIS CE1 C Y N 27 HIS NE2 N Y N 28 HIS OXT O N N 29 HIS H H N N 30 HIS H2 H N N 31 HIS HA H N N 32 HIS HB2 H N N 33 HIS HB3 H N N 34 HIS HD1 H N N 35 HIS HD2 H N N 36 HIS HE1 H N N 37 HIS HE2 H N N 38 HIS HXT H N N 39 HOH O O N N 40 HOH H1 H N N 41 HOH H2 H N N 42 LEU N N N N 43 LEU CA C N S 44 LEU C C N N 45 LEU O O N N 46 LEU CB C N N 47 LEU CG C N N 48 LEU CD1 C N N 49 LEU CD2 C N N 50 LEU OXT O N N 51 LEU H H N N 52 LEU H2 H N N 53 LEU HA H N N 54 LEU HB2 H N N 55 LEU HB3 H N N 56 LEU HG H N N 57 LEU HD11 H N N 58 LEU HD12 H N N 59 LEU HD13 H N N 60 LEU HD21 H N N 61 LEU HD22 H N N 62 LEU HD23 H N N 63 LEU HXT H N N 64 PHE N N N N 65 PHE CA C N S 66 PHE C C N N 67 PHE O O N N 68 PHE CB C N N 69 PHE CG C Y N 70 PHE CD1 C Y N 71 PHE CD2 C Y N 72 PHE CE1 C Y N 73 PHE CE2 C Y N 74 PHE CZ C Y N 75 PHE OXT O N N 76 PHE H H N N 77 PHE H2 H N N 78 PHE HA H N N 79 PHE HB2 H N N 80 PHE HB3 H N N 81 PHE HD1 H N N 82 PHE HD2 H N N 83 PHE HE1 H N N 84 PHE HE2 H N N 85 PHE HZ H N N 86 PHE HXT H N N 87 SER N N N N 88 SER CA C N S 89 SER C C N N 90 SER O O N N 91 SER CB C N N 92 SER OG O N N 93 SER OXT O N N 94 SER H H N N 95 SER H2 H N N 96 SER HA H N N 97 SER HB2 H N N 98 SER HB3 H N N 99 SER HG H N N 100 SER HXT H N N 101 VAL N N N N 102 VAL CA C N S 103 VAL C C N N 104 VAL O O N N 105 VAL CB C N N 106 VAL CG1 C N N 107 VAL CG2 C N N 108 VAL OXT O N N 109 VAL H H N N 110 VAL H2 H N N 111 VAL HA H N N 112 VAL HB H N N 113 VAL HG11 H N N 114 VAL HG12 H N N 115 VAL HG13 H N N 116 VAL HG21 H N N 117 VAL HG22 H N N 118 VAL HG23 H N N 119 VAL HXT H N N 120 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ASN N CA sing N N 1 ASN N H sing N N 2 ASN N H2 sing N N 3 ASN CA C sing N N 4 ASN CA CB sing N N 5 ASN CA HA sing N N 6 ASN C O doub N N 7 ASN C OXT sing N N 8 ASN CB CG sing N N 9 ASN CB HB2 sing N N 10 ASN CB HB3 sing N N 11 ASN CG OD1 doub N N 12 ASN CG ND2 sing N N 13 ASN ND2 HD21 sing N N 14 ASN ND2 HD22 sing N N 15 ASN OXT HXT sing N N 16 HIS N CA sing N N 17 HIS N H sing N N 18 HIS N H2 sing N N 19 HIS CA C sing N N 20 HIS CA CB sing N N 21 HIS CA HA sing N N 22 HIS C O doub N N 23 HIS C OXT sing N N 24 HIS CB CG sing N N 25 HIS CB HB2 sing N N 26 HIS CB HB3 sing N N 27 HIS CG ND1 sing Y N 28 HIS CG CD2 doub Y N 29 HIS ND1 CE1 doub Y N 30 HIS ND1 HD1 sing N N 31 HIS CD2 NE2 sing Y N 32 HIS CD2 HD2 sing N N 33 HIS CE1 NE2 sing Y N 34 HIS CE1 HE1 sing N N 35 HIS NE2 HE2 sing N N 36 HIS OXT HXT sing N N 37 HOH O H1 sing N N 38 HOH O H2 sing N N 39 LEU N CA sing N N 40 LEU N H sing N N 41 LEU N H2 sing N N 42 LEU CA C sing N N 43 LEU CA CB sing N N 44 LEU CA HA sing N N 45 LEU C O doub N N 46 LEU C OXT sing N N 47 LEU CB CG sing N N 48 LEU CB HB2 sing N N 49 LEU CB HB3 sing N N 50 LEU CG CD1 sing N N 51 LEU CG CD2 sing N N 52 LEU CG HG sing N N 53 LEU CD1 HD11 sing N N 54 LEU CD1 HD12 sing N N 55 LEU CD1 HD13 sing N N 56 LEU CD2 HD21 sing N N 57 LEU CD2 HD22 sing N N 58 LEU CD2 HD23 sing N N 59 LEU OXT HXT sing N N 60 PHE N CA sing N N 61 PHE N H sing N N 62 PHE N H2 sing N N 63 PHE CA C sing N N 64 PHE CA CB sing N N 65 PHE CA HA sing N N 66 PHE C O doub N N 67 PHE C OXT sing N N 68 PHE CB CG sing N N 69 PHE CB HB2 sing N N 70 PHE CB HB3 sing N N 71 PHE CG CD1 doub Y N 72 PHE CG CD2 sing Y N 73 PHE CD1 CE1 sing Y N 74 PHE CD1 HD1 sing N N 75 PHE CD2 CE2 doub Y N 76 PHE CD2 HD2 sing N N 77 PHE CE1 CZ doub Y N 78 PHE CE1 HE1 sing N N 79 PHE CE2 CZ sing Y N 80 PHE CE2 HE2 sing N N 81 PHE CZ HZ sing N N 82 PHE OXT HXT sing N N 83 SER N CA sing N N 84 SER N H sing N N 85 SER N H2 sing N N 86 SER CA C sing N N 87 SER CA CB sing N N 88 SER CA HA sing N N 89 SER C O doub N N 90 SER C OXT sing N N 91 SER CB OG sing N N 92 SER CB HB2 sing N N 93 SER CB HB3 sing N N 94 SER OG HG sing N N 95 SER OXT HXT sing N N 96 VAL N CA sing N N 97 VAL N H sing N N 98 VAL N H2 sing N N 99 VAL CA C sing N N 100 VAL CA CB sing N N 101 VAL CA HA sing N N 102 VAL C O doub N N 103 VAL C OXT sing N N 104 VAL CB CG1 sing N N 105 VAL CB CG2 sing N N 106 VAL CB HB sing N N 107 VAL CG1 HG11 sing N N 108 VAL CG1 HG12 sing N N 109 VAL CG1 HG13 sing N N 110 VAL CG2 HG21 sing N N 111 VAL CG2 HG22 sing N N 112 VAL CG2 HG23 sing N N 113 VAL OXT HXT sing N N 114 # _atom_sites.entry_id 3FR1 _atom_sites.fract_transf_matrix[1][1] 0.087108 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.104690 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025919 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL N O # loop_