data_3FSQ # _entry.id 3FSQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3FSQ NDB PD1219 RCSB RCSB050995 WWPDB D_1000050995 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2015-09-23 _pdbx_database_PDB_obs_spr.pdb_id 5DPK _pdbx_database_PDB_obs_spr.replace_pdb_id 3FSQ _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3FSP 'MutY adenine glycosylase in complex with DNA containing the 1N transition state analog paired with guanine at 2.20 A resolution' unspecified PDB 1RRQ 'MutY bound to DNA with an A:8-oxoG basepair, the lesion recognition complex' unspecified PDB 1RRS 'MutY bound to DNA with an abasic site' unspecified PDB 1VRL 'MutY bound to DNA and adenine free base' unspecified # _pdbx_database_status.status_code OBS _pdbx_database_status.entry_id 3FSQ _pdbx_database_status.recvd_initial_deposition_date 2009-01-11 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal ;O'Shea, V.L. ; 1 'Horvath, M.P.' 2 'David, S.S.' 3 # _citation.id primary _citation.title 'Structural illumination of a mutY glycosylase reaction coordinate intermediate' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary ;O'Shea, V.L. ; 1 primary 'Cao, S.' 2 primary 'Richards, J.L.' 3 primary 'Horvath, M.P.' 4 primary 'David, S.S.' 5 # _cell.entry_id 3FSQ _cell.length_a 37.793 _cell.length_b 86.516 _cell.length_c 140.585 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3FSQ _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'A/G-specific adenine glycosylase' 42092.898 1 3.2.2.- ? ? ? 2 polymer syn "5'-D(*AP*AP*GP*AP*CP*(8OG)P*TP*GP*GP*AP*C)-3'" 3423.249 1 ? ? ? ? 3 polymer syn "5'-D(*T*GP*TP*CP*CP*AP*(NRI)P*GP*TP*CP*T)-3'" 3190.088 1 ? ? ? ? 4 non-polymer syn 'IRON/SULFUR CLUSTER' 351.640 1 ? ? ? ? 5 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 6 water nat water 18.015 136 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSHMTRETERFPAREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADED EVLKAWEGLGYYSRVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVDGNVMRVLSRLFLV TDDIAKPSTRKRFEQIVREIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVAEELPVKMKKTAVKQV PLAVAVLADDEGRVLIRKRDSTGLLANLWEFPSCETDGADGKEKLEQMVGEQYGLQVELTEPIVSFEHAFSHLVWQLTVF PGRLVHGGPVEEPYRLAPEDELKAYAFPVSHQRVWREYKEWASGVRPPP ; ;GSHMTRETERFPAREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADED EVLKAWEGLGYYSRVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVDGNVMRVLSRLFLV TDDIAKPSTRKRFEQIVREIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVAEELPVKMKKTAVKQV PLAVAVLADDEGRVLIRKRDSTGLLANLWEFPSCETDGADGKEKLEQMVGEQYGLQVELTEPIVSFEHAFSHLVWQLTVF PGRLVHGGPVEEPYRLAPEDELKAYAFPVSHQRVWREYKEWASGVRPPP ; A ? 2 polydeoxyribonucleotide no yes '(DA)(DA)(DG)(DA)(DC)(8OG)(DT)(DG)(DG)(DA)(DC)' AAGACGTGGAC B ? 3 polydeoxyribonucleotide no yes '(DT)(DG)(DT)(DC)(DC)(DA)(NRI)(DG)(DT)(DC)(DT)' TGTCCAXGTCT C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 THR n 1 6 ARG n 1 7 GLU n 1 8 THR n 1 9 GLU n 1 10 ARG n 1 11 PHE n 1 12 PRO n 1 13 ALA n 1 14 ARG n 1 15 GLU n 1 16 PHE n 1 17 GLN n 1 18 ARG n 1 19 ASP n 1 20 LEU n 1 21 LEU n 1 22 ASP n 1 23 TRP n 1 24 PHE n 1 25 ALA n 1 26 ARG n 1 27 GLU n 1 28 ARG n 1 29 ARG n 1 30 ASP n 1 31 LEU n 1 32 PRO n 1 33 TRP n 1 34 ARG n 1 35 LYS n 1 36 ASP n 1 37 ARG n 1 38 ASP n 1 39 PRO n 1 40 TYR n 1 41 LYS n 1 42 VAL n 1 43 TRP n 1 44 VAL n 1 45 SER n 1 46 GLU n 1 47 VAL n 1 48 MET n 1 49 LEU n 1 50 GLN n 1 51 GLN n 1 52 THR n 1 53 ARG n 1 54 VAL n 1 55 GLU n 1 56 THR n 1 57 VAL n 1 58 ILE n 1 59 PRO n 1 60 TYR n 1 61 PHE n 1 62 GLU n 1 63 GLN n 1 64 PHE n 1 65 ILE n 1 66 ASP n 1 67 ARG n 1 68 PHE n 1 69 PRO n 1 70 THR n 1 71 LEU n 1 72 GLU n 1 73 ALA n 1 74 LEU n 1 75 ALA n 1 76 ASP n 1 77 ALA n 1 78 ASP n 1 79 GLU n 1 80 ASP n 1 81 GLU n 1 82 VAL n 1 83 LEU n 1 84 LYS n 1 85 ALA n 1 86 TRP n 1 87 GLU n 1 88 GLY n 1 89 LEU n 1 90 GLY n 1 91 TYR n 1 92 TYR n 1 93 SER n 1 94 ARG n 1 95 VAL n 1 96 ARG n 1 97 ASN n 1 98 LEU n 1 99 HIS n 1 100 ALA n 1 101 ALA n 1 102 VAL n 1 103 LYS n 1 104 GLU n 1 105 VAL n 1 106 LYS n 1 107 THR n 1 108 ARG n 1 109 TYR n 1 110 GLY n 1 111 GLY n 1 112 LYS n 1 113 VAL n 1 114 PRO n 1 115 ASP n 1 116 ASP n 1 117 PRO n 1 118 ASP n 1 119 GLU n 1 120 PHE n 1 121 SER n 1 122 ARG n 1 123 LEU n 1 124 LYS n 1 125 GLY n 1 126 VAL n 1 127 GLY n 1 128 PRO n 1 129 TYR n 1 130 THR n 1 131 VAL n 1 132 GLY n 1 133 ALA n 1 134 VAL n 1 135 LEU n 1 136 SER n 1 137 LEU n 1 138 ALA n 1 139 TYR n 1 140 GLY n 1 141 VAL n 1 142 PRO n 1 143 GLU n 1 144 PRO n 1 145 ALA n 1 146 VAL n 1 147 ASP n 1 148 GLY n 1 149 ASN n 1 150 VAL n 1 151 MET n 1 152 ARG n 1 153 VAL n 1 154 LEU n 1 155 SER n 1 156 ARG n 1 157 LEU n 1 158 PHE n 1 159 LEU n 1 160 VAL n 1 161 THR n 1 162 ASP n 1 163 ASP n 1 164 ILE n 1 165 ALA n 1 166 LYS n 1 167 PRO n 1 168 SER n 1 169 THR n 1 170 ARG n 1 171 LYS n 1 172 ARG n 1 173 PHE n 1 174 GLU n 1 175 GLN n 1 176 ILE n 1 177 VAL n 1 178 ARG n 1 179 GLU n 1 180 ILE n 1 181 MET n 1 182 ALA n 1 183 TYR n 1 184 GLU n 1 185 ASN n 1 186 PRO n 1 187 GLY n 1 188 ALA n 1 189 PHE n 1 190 ASN n 1 191 GLU n 1 192 ALA n 1 193 LEU n 1 194 ILE n 1 195 GLU n 1 196 LEU n 1 197 GLY n 1 198 ALA n 1 199 LEU n 1 200 VAL n 1 201 CYS n 1 202 THR n 1 203 PRO n 1 204 ARG n 1 205 ARG n 1 206 PRO n 1 207 SER n 1 208 CYS n 1 209 LEU n 1 210 LEU n 1 211 CYS n 1 212 PRO n 1 213 VAL n 1 214 GLN n 1 215 ALA n 1 216 TYR n 1 217 CYS n 1 218 GLN n 1 219 ALA n 1 220 PHE n 1 221 ALA n 1 222 GLU n 1 223 GLY n 1 224 VAL n 1 225 ALA n 1 226 GLU n 1 227 GLU n 1 228 LEU n 1 229 PRO n 1 230 VAL n 1 231 LYS n 1 232 MET n 1 233 LYS n 1 234 LYS n 1 235 THR n 1 236 ALA n 1 237 VAL n 1 238 LYS n 1 239 GLN n 1 240 VAL n 1 241 PRO n 1 242 LEU n 1 243 ALA n 1 244 VAL n 1 245 ALA n 1 246 VAL n 1 247 LEU n 1 248 ALA n 1 249 ASP n 1 250 ASP n 1 251 GLU n 1 252 GLY n 1 253 ARG n 1 254 VAL n 1 255 LEU n 1 256 ILE n 1 257 ARG n 1 258 LYS n 1 259 ARG n 1 260 ASP n 1 261 SER n 1 262 THR n 1 263 GLY n 1 264 LEU n 1 265 LEU n 1 266 ALA n 1 267 ASN n 1 268 LEU n 1 269 TRP n 1 270 GLU n 1 271 PHE n 1 272 PRO n 1 273 SER n 1 274 CYS n 1 275 GLU n 1 276 THR n 1 277 ASP n 1 278 GLY n 1 279 ALA n 1 280 ASP n 1 281 GLY n 1 282 LYS n 1 283 GLU n 1 284 LYS n 1 285 LEU n 1 286 GLU n 1 287 GLN n 1 288 MET n 1 289 VAL n 1 290 GLY n 1 291 GLU n 1 292 GLN n 1 293 TYR n 1 294 GLY n 1 295 LEU n 1 296 GLN n 1 297 VAL n 1 298 GLU n 1 299 LEU n 1 300 THR n 1 301 GLU n 1 302 PRO n 1 303 ILE n 1 304 VAL n 1 305 SER n 1 306 PHE n 1 307 GLU n 1 308 HIS n 1 309 ALA n 1 310 PHE n 1 311 SER n 1 312 HIS n 1 313 LEU n 1 314 VAL n 1 315 TRP n 1 316 GLN n 1 317 LEU n 1 318 THR n 1 319 VAL n 1 320 PHE n 1 321 PRO n 1 322 GLY n 1 323 ARG n 1 324 LEU n 1 325 VAL n 1 326 HIS n 1 327 GLY n 1 328 GLY n 1 329 PRO n 1 330 VAL n 1 331 GLU n 1 332 GLU n 1 333 PRO n 1 334 TYR n 1 335 ARG n 1 336 LEU n 1 337 ALA n 1 338 PRO n 1 339 GLU n 1 340 ASP n 1 341 GLU n 1 342 LEU n 1 343 LYS n 1 344 ALA n 1 345 TYR n 1 346 ALA n 1 347 PHE n 1 348 PRO n 1 349 VAL n 1 350 SER n 1 351 HIS n 1 352 GLN n 1 353 ARG n 1 354 VAL n 1 355 TRP n 1 356 ARG n 1 357 GLU n 1 358 TYR n 1 359 LYS n 1 360 GLU n 1 361 TRP n 1 362 ALA n 1 363 SER n 1 364 GLY n 1 365 VAL n 1 366 ARG n 1 367 PRO n 1 368 PRO n 1 369 PRO n 2 1 DA n 2 2 DA n 2 3 DG n 2 4 DA n 2 5 DC n 2 6 8OG n 2 7 DT n 2 8 DG n 2 9 DG n 2 10 DA n 2 11 DC n 3 1 DT n 3 2 DG n 3 3 DT n 3 4 DC n 3 5 DC n 3 6 DA n 3 7 NRI n 3 8 DG n 3 9 DT n 3 10 DC n 3 11 DT n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene mutY _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Geobacillus stearothermophilus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1422 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? ? ? ? 'DNA chemically synthesized with modified nucleotide 8-oxoG at position 6' 3 1 sample ? ? ? ? ? 'DNA chemically synthesized with 1N transition state analog at position 18' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code P83847_BACST _struct_ref.pdbx_db_accession P83847 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTRETERFPAREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADEDEVL KAWEGLGYYSRVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVNGNVMRVLSRLFLVTDD IAKPSTRKRFEQIVREIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVAEELPVKMKKTAVKQVPLA VAVLADDEGRVLIRKRDSTGLLANLWEFPSCETDGADGKEKLEQMVGEQYGLQVELTEPIVSFEHAFSHLVWQLTVFPGR LVHGGPVEEPYRLAPEDELKAYAFPVSHQRVWREYKEWASGVRPPP ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3FSQ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 369 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P83847 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 366 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 366 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3FSQ GLY A 1 ? UNP P83847 ? ? 'EXPRESSION TAG' -2 1 1 3FSQ SER A 2 ? UNP P83847 ? ? 'EXPRESSION TAG' -1 2 1 3FSQ HIS A 3 ? UNP P83847 ? ? 'EXPRESSION TAG' 0 3 1 3FSQ ASP A 147 ? UNP P83847 ASN 144 'SEE REMARK 999' 144 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8OG 'DNA linking' n "8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" "8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" 'C10 H14 N5 O8 P' 363.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NRI 'DNA linking' . 'PHOSPHORIC ACID MONO-(4-HYDROXY-PYRROLIDIN-3-YLMETHYL) ESTER' ? 'C5 H12 N O5 P' 197.126 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SF4 non-polymer . 'IRON/SULFUR CLUSTER' ? 'Fe4 S4' 351.640 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3FSQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.36 _exptl_crystal.density_percent_sol 47.87 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;micro-seeded, 0.5M calcium acetate, 0.1M tris, 14% (w/v) PEG4000, 0.005M beta-mercaptoethanol, 5% (w/v) ethylene glycol, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K ; # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'Calcium acetate' ? ? ? 1 2 1 PEG4000 ? ? ? 1 3 1 Beta-mercaptoethanol ? ? ? 1 4 1 'Ethylene glycol' ? ? ? 1 5 2 'Calcium acetate' ? ? ? 1 6 2 PEG4000 ? ? ? 1 7 2 Beta-mercaptoethanol ? ? ? 1 8 2 'Ethylene glycol' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2008-04-02 _diffrn_detector.details 'KOHZU, SI(111) CRYSTALS' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI(111) CRYSTALS' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.11583 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 12.3.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 12.3.1 _diffrn_source.pdbx_wavelength 1.11583 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3FSQ _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 2.300 _reflns.number_obs 21114 _reflns.number_all ? _reflns.percent_possible_obs 98.9 _reflns.pdbx_Rmerge_I_obs 0.06500 _reflns.pdbx_Rsym_value 0.06500 _reflns.pdbx_netI_over_sigmaI 12.0000 _reflns.B_iso_Wilson_estimate 53.20 _reflns.pdbx_redundancy 6.800 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.38 _reflns_shell.percent_possible_all 98.9 _reflns_shell.Rmerge_I_obs 0.44500 _reflns_shell.pdbx_Rsym_value 0.44500 _reflns_shell.meanI_over_sigI_obs 3.300 _reflns_shell.pdbx_redundancy 6.50 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3FSQ _refine.ls_number_reflns_obs 21062 _refine.ls_number_reflns_all 21059 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 41.345 _refine.ls_d_res_high 2.300 _refine.ls_percent_reflns_obs 98.86 _refine.ls_R_factor_obs 0.2244 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2244 _refine.ls_R_factor_R_free 0.2494 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.76 _refine.ls_number_reflns_R_free 1003 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 50.85 _refine.aniso_B[1][1] -7.1441 _refine.aniso_B[2][2] 8.3008 _refine.aniso_B[3][3] -2.5996 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;ACTIVE SITE RESIDUES AND DNA NUCLEOTIDES REMOVED FROM MR SEARCH MODEL; TORSION ANGLE SIMULATED ANNEALING, POSITIONAL, RESTRAINED INDIVIDUAL B-VALUE REFINEMENT; MODEL ADJUSTMENTS IN CONTEXT OF SIGMA-A WEIGHTED COMPOSITE SA-OMIT MAPS ; _refine.pdbx_starting_model 'PDB ID 1RRQ' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model OVERALL _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details 'RANDOM; SAME CROSS- VALIDATION DATA SET AS USED FOR REFINEMENT OF PDB ID 3FSP' _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 3FSQ _refine_analyze.Luzzati_coordinate_error_obs 0.32 _refine_analyze.Luzzati_sigma_a_obs 0.37 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.37 _refine_analyze.Luzzati_sigma_a_free 0.41 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2753 _refine_hist.pdbx_number_atoms_nucleic_acid 421 _refine_hist.pdbx_number_atoms_ligand 9 _refine_hist.number_atoms_solvent 136 _refine_hist.number_atoms_total 3319 _refine_hist.d_res_high 2.300 _refine_hist.d_res_low 41.345 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.132 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.651 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 6.183 ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 7.913 ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 7 _refine_ls_shell.d_res_high 2.30 _refine_ls_shell.d_res_low 2.4208 _refine_ls_shell.number_reflns_R_work 2736 _refine_ls_shell.R_factor_R_work 0.3036 _refine_ls_shell.percent_reflns_obs 96 _refine_ls_shell.R_factor_R_free 0.3580 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 4.87 _refine_ls_shell.number_reflns_R_free 140 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 FS4b.cif FS4b.cif 'X-RAY DIFFRACTION' 2 8OG_smiles_from_og1n23a.cif 8OG_smiles_from_og1n23a.cif 'X-RAY DIFFRACTION' 3 NRI_smiles_from_og1n23a.cif NRI_smiles_from_og1n23a.cif 'X-RAY DIFFRACTION' 4 NRI.edits NRI.edits 'X-RAY DIFFRACTION' 5 metal_og1n23a_26.edits metal_og1n23a_26.edits # _struct.entry_id 3FSQ _struct.title 'MutY adenine glycosylase bound to a transition state analog (1N) paired with d(8-oxoG) in duplexed DNA' _struct.pdbx_descriptor 'A/G-specific adenine glycosylase (E.C.3.2.2.-)/DNA complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3FSQ _struct_keywords.pdbx_keywords HYDROLASE/DNA _struct_keywords.text 'PROTEIN-DNA COMPLEX, DNA GLYCOSYLASE, TRANSITION STATE ANALOG, DNA repair, Glycosidase, HYDROLASE-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 12 ? ARG A 28 ? PRO A 9 ARG A 25 1 ? 17 HELX_P HELX_P2 2 LEU A 31 ? LYS A 35 ? LEU A 28 LYS A 32 5 ? 5 HELX_P HELX_P3 3 ASP A 38 ? LEU A 49 ? ASP A 35 LEU A 46 1 ? 12 HELX_P HELX_P4 4 ARG A 53 ? PHE A 68 ? ARG A 50 PHE A 65 1 ? 16 HELX_P HELX_P5 5 THR A 70 ? ASP A 76 ? THR A 67 ASP A 73 1 ? 7 HELX_P HELX_P6 6 ASP A 78 ? LEU A 83 ? ASP A 75 LEU A 80 1 ? 6 HELX_P HELX_P7 7 LYS A 84 ? GLU A 87 ? LYS A 81 GLU A 84 5 ? 4 HELX_P HELX_P8 8 TYR A 92 ? ARG A 108 ? TYR A 89 ARG A 105 1 ? 17 HELX_P HELX_P9 9 ASP A 116 ? SER A 121 ? ASP A 113 SER A 118 1 ? 6 HELX_P HELX_P10 10 GLY A 127 ? TYR A 139 ? GLY A 124 TYR A 136 1 ? 13 HELX_P HELX_P11 11 ASP A 147 ? PHE A 158 ? ASP A 144 PHE A 155 1 ? 12 HELX_P HELX_P12 12 SER A 168 ? MET A 181 ? SER A 165 MET A 178 1 ? 14 HELX_P HELX_P13 13 ASN A 185 ? VAL A 200 ? ASN A 182 VAL A 197 1 ? 16 HELX_P HELX_P14 14 CYS A 217 ? GLU A 222 ? CYS A 214 GLU A 219 1 ? 6 HELX_P HELX_P15 15 ASP A 280 ? GLY A 290 ? ASP A 277 GLY A 287 1 ? 11 HELX_P HELX_P16 16 PRO A 338 ? TYR A 345 ? PRO A 335 TYR A 342 5 ? 8 HELX_P HELX_P17 17 PRO A 348 ? ALA A 362 ? PRO A 345 ALA A 359 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? B DC 5 "O3'" ? ? ? 1_555 B 8OG 6 P ? ? B DC 5 B 8OG 6 1_555 ? ? ? ? ? ? ? 1.585 ? covale2 covale ? ? B 8OG 6 "O3'" ? ? ? 1_555 B DT 7 P ? ? B 8OG 6 B DT 7 1_555 ? ? ? ? ? ? ? 1.597 ? covale3 covale ? ? C DA 6 "O3'" ? ? ? 1_555 C NRI 7 P ? ? C DA 17 C NRI 18 1_555 ? ? ? ? ? ? ? 1.607 ? covale4 covale ? ? C NRI 7 "O3'" ? ? ? 1_555 C DG 8 P ? ? C NRI 18 C DG 19 1_555 ? ? ? ? ? ? ? 1.602 ? metalc1 metalc ? ? A SER 121 O ? ? ? 1_555 E CA . CA ? ? A SER 118 A CA 501 1_555 ? ? ? ? ? ? ? 2.231 ? metalc2 metalc ? ? A SER 121 OG ? ? ? 1_555 E CA . CA ? ? A SER 118 A CA 501 1_555 ? ? ? ? ? ? ? 2.304 ? metalc3 metalc ? ? A VAL 126 O ? ? ? 1_555 E CA . CA ? ? A VAL 123 A CA 501 1_555 ? ? ? ? ? ? ? 2.220 ? metalc4 metalc ? ? A CYS 201 SG ? ? ? 1_555 D SF4 . FE3 ? ? A CYS 198 A SF4 400 1_555 ? ? ? ? ? ? ? 2.310 ? metalc5 metalc ? ? A CYS 208 SG ? ? ? 1_555 D SF4 . FE2 ? ? A CYS 205 A SF4 400 1_555 ? ? ? ? ? ? ? 2.080 ? metalc6 metalc ? ? A CYS 211 SG ? ? ? 1_555 D SF4 . FE1 ? ? A CYS 208 A SF4 400 1_555 ? ? ? ? ? ? ? 2.170 ? metalc7 metalc ? ? A CYS 217 SG ? ? ? 1_555 D SF4 . FE4 ? ? A CYS 214 A SF4 400 1_555 ? ? ? ? ? ? ? 2.091 ? metalc8 metalc ? ? E CA . CA ? ? ? 1_555 F HOH . O ? ? A CA 501 A HOH 405 1_555 ? ? ? ? ? ? ? 2.632 ? metalc9 metalc ? ? E CA . CA ? ? ? 1_555 H HOH . O ? ? A CA 501 C HOH 493 1_555 ? ? ? ? ? ? ? 2.207 ? metalc10 metalc ? ? E CA . CA ? ? ? 1_555 F HOH . O ? ? A CA 501 A HOH 427 1_555 ? ? ? ? ? ? ? 2.292 ? hydrog1 hydrog ? ? B DA 2 N1 ? ? ? 1_555 C DT 11 N3 ? ? B DA 2 C DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? B DA 2 N6 ? ? ? 1_555 C DT 11 O4 ? ? B DA 2 C DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 10 N3 ? ? B DG 3 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 10 O2 ? ? B DG 3 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 10 N4 ? ? B DG 3 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? B DA 4 N1 ? ? ? 1_555 C DT 9 N3 ? ? B DA 4 C DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? B DA 4 N6 ? ? ? 1_555 C DT 9 O4 ? ? B DA 4 C DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? B DC 5 N3 ? ? ? 1_555 C DG 8 N1 ? ? B DC 5 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? B DC 5 N4 ? ? ? 1_555 C DG 8 O6 ? ? B DC 5 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? B DC 5 O2 ? ? ? 1_555 C DG 8 N2 ? ? B DC 5 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? B DT 7 N3 ? ? ? 1_555 C DA 6 N1 ? ? B DT 7 C DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? B DT 7 O4 ? ? ? 1_555 C DA 6 N6 ? ? B DT 7 C DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog13 hydrog ? ? B DG 8 N1 ? ? ? 1_555 C DC 5 N3 ? ? B DG 8 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? B DG 8 N2 ? ? ? 1_555 C DC 5 O2 ? ? B DG 8 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? B DG 8 O6 ? ? ? 1_555 C DC 5 N4 ? ? B DG 8 C DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog16 hydrog ? ? B DG 9 N1 ? ? ? 1_555 C DC 4 N3 ? ? B DG 9 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog17 hydrog ? ? B DG 9 N2 ? ? ? 1_555 C DC 4 O2 ? ? B DG 9 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog18 hydrog ? ? B DG 9 O6 ? ? ? 1_555 C DC 4 N4 ? ? B DG 9 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog19 hydrog ? ? B DA 10 N1 ? ? ? 1_555 C DT 3 N3 ? ? B DA 10 C DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? B DA 10 N6 ? ? ? 1_555 C DT 3 O4 ? ? B DA 10 C DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog21 hydrog ? ? B DC 11 N3 ? ? ? 1_555 C DG 2 N1 ? ? B DC 11 C DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog22 hydrog ? ? B DC 11 N4 ? ? ? 1_555 C DG 2 O6 ? ? B DC 11 C DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog23 hydrog ? ? B DC 11 O2 ? ? ? 1_555 C DG 2 N2 ? ? B DC 11 C DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LEU 228 A . ? LEU 225 A PRO 229 A ? PRO 226 A 1 -5.84 2 GLU 332 A . ? GLU 329 A PRO 333 A ? PRO 330 A 1 5.22 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 273 ? GLU A 275 ? SER A 270 GLU A 272 A 2 LYS A 238 ? ASP A 249 ? LYS A 235 ASP A 246 A 3 LEU A 313 ? LEU A 324 ? LEU A 310 LEU A 321 A 4 VAL A 304 ? ALA A 309 ? VAL A 301 ALA A 306 B 1 TRP A 269 ? GLU A 270 ? TRP A 266 GLU A 267 B 2 VAL A 254 ? LYS A 258 ? VAL A 251 LYS A 255 B 3 TYR A 334 ? ALA A 337 ? TYR A 331 ALA A 334 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O CYS A 274 ? O CYS A 271 N ALA A 243 ? N ALA A 240 A 2 3 N LEU A 242 ? N LEU A 239 O GLN A 316 ? O GLN A 313 A 3 4 O TRP A 315 ? O TRP A 312 N HIS A 308 ? N HIS A 305 B 1 2 O GLU A 270 ? O GLU A 267 N ARG A 257 ? N ARG A 254 B 2 3 N VAL A 254 ? N VAL A 251 O ALA A 337 ? O ALA A 334 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE SF4 A 400' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE CA A 501' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 CYS A 201 ? CYS A 198 . ? 1_555 ? 2 AC1 6 PRO A 206 ? PRO A 203 . ? 1_555 ? 3 AC1 6 CYS A 208 ? CYS A 205 . ? 1_555 ? 4 AC1 6 CYS A 211 ? CYS A 208 . ? 1_555 ? 5 AC1 6 GLN A 214 ? GLN A 211 . ? 1_555 ? 6 AC1 6 CYS A 217 ? CYS A 214 . ? 1_555 ? 7 AC2 5 SER A 121 ? SER A 118 . ? 1_555 ? 8 AC2 5 VAL A 126 ? VAL A 123 . ? 1_555 ? 9 AC2 5 HOH F . ? HOH A 405 . ? 1_555 ? 10 AC2 5 HOH F . ? HOH A 427 . ? 1_555 ? 11 AC2 5 HOH H . ? HOH C 493 . ? 1_555 ? # _database_PDB_matrix.entry_id 3FSQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3FSQ _atom_sites.fract_transf_matrix[1][1] 0.026460 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011559 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007113 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA FE N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -2 ? ? ? A . n A 1 2 SER 2 -1 ? ? ? A . n A 1 3 HIS 3 0 ? ? ? A . n A 1 4 MET 4 1 ? ? ? A . n A 1 5 THR 5 2 ? ? ? A . n A 1 6 ARG 6 3 ? ? ? A . n A 1 7 GLU 7 4 ? ? ? A . n A 1 8 THR 8 5 ? ? ? A . n A 1 9 GLU 9 6 ? ? ? A . n A 1 10 ARG 10 7 ? ? ? A . n A 1 11 PHE 11 8 8 PHE PHE A . n A 1 12 PRO 12 9 9 PRO PRO A . n A 1 13 ALA 13 10 10 ALA ALA A . n A 1 14 ARG 14 11 11 ARG ARG A . n A 1 15 GLU 15 12 12 GLU GLU A . n A 1 16 PHE 16 13 13 PHE PHE A . n A 1 17 GLN 17 14 14 GLN GLN A . n A 1 18 ARG 18 15 15 ARG ARG A . n A 1 19 ASP 19 16 16 ASP ASP A . n A 1 20 LEU 20 17 17 LEU LEU A . n A 1 21 LEU 21 18 18 LEU LEU A . n A 1 22 ASP 22 19 19 ASP ASP A . n A 1 23 TRP 23 20 20 TRP TRP A . n A 1 24 PHE 24 21 21 PHE PHE A . n A 1 25 ALA 25 22 22 ALA ALA A . n A 1 26 ARG 26 23 23 ARG ARG A . n A 1 27 GLU 27 24 24 GLU GLU A . n A 1 28 ARG 28 25 25 ARG ARG A . n A 1 29 ARG 29 26 26 ARG ARG A . n A 1 30 ASP 30 27 27 ASP ASP A . n A 1 31 LEU 31 28 28 LEU LEU A . n A 1 32 PRO 32 29 29 PRO PRO A . n A 1 33 TRP 33 30 30 TRP TRP A . n A 1 34 ARG 34 31 31 ARG ARG A . n A 1 35 LYS 35 32 32 LYS LYS A . n A 1 36 ASP 36 33 33 ASP ASP A . n A 1 37 ARG 37 34 34 ARG ARG A . n A 1 38 ASP 38 35 35 ASP ASP A . n A 1 39 PRO 39 36 36 PRO PRO A . n A 1 40 TYR 40 37 37 TYR TYR A . n A 1 41 LYS 41 38 38 LYS LYS A . n A 1 42 VAL 42 39 39 VAL VAL A . n A 1 43 TRP 43 40 40 TRP TRP A . n A 1 44 VAL 44 41 41 VAL VAL A . n A 1 45 SER 45 42 42 SER SER A . n A 1 46 GLU 46 43 43 GLU GLU A . n A 1 47 VAL 47 44 44 VAL VAL A . n A 1 48 MET 48 45 45 MET MET A . n A 1 49 LEU 49 46 46 LEU LEU A . n A 1 50 GLN 50 47 47 GLN GLN A . n A 1 51 GLN 51 48 48 GLN GLN A . n A 1 52 THR 52 49 49 THR THR A . n A 1 53 ARG 53 50 50 ARG ARG A . n A 1 54 VAL 54 51 51 VAL VAL A . n A 1 55 GLU 55 52 52 GLU GLU A . n A 1 56 THR 56 53 53 THR THR A . n A 1 57 VAL 57 54 54 VAL VAL A . n A 1 58 ILE 58 55 55 ILE ILE A . n A 1 59 PRO 59 56 56 PRO PRO A . n A 1 60 TYR 60 57 57 TYR TYR A . n A 1 61 PHE 61 58 58 PHE PHE A . n A 1 62 GLU 62 59 59 GLU GLU A . n A 1 63 GLN 63 60 60 GLN GLN A . n A 1 64 PHE 64 61 61 PHE PHE A . n A 1 65 ILE 65 62 62 ILE ILE A . n A 1 66 ASP 66 63 63 ASP ASP A . n A 1 67 ARG 67 64 64 ARG ARG A . n A 1 68 PHE 68 65 65 PHE PHE A . n A 1 69 PRO 69 66 66 PRO PRO A . n A 1 70 THR 70 67 67 THR THR A . n A 1 71 LEU 71 68 68 LEU LEU A . n A 1 72 GLU 72 69 69 GLU GLU A . n A 1 73 ALA 73 70 70 ALA ALA A . n A 1 74 LEU 74 71 71 LEU LEU A . n A 1 75 ALA 75 72 72 ALA ALA A . n A 1 76 ASP 76 73 73 ASP ASP A . n A 1 77 ALA 77 74 74 ALA ALA A . n A 1 78 ASP 78 75 75 ASP ASP A . n A 1 79 GLU 79 76 76 GLU GLU A . n A 1 80 ASP 80 77 77 ASP ASP A . n A 1 81 GLU 81 78 78 GLU GLU A . n A 1 82 VAL 82 79 79 VAL VAL A . n A 1 83 LEU 83 80 80 LEU LEU A . n A 1 84 LYS 84 81 81 LYS LYS A . n A 1 85 ALA 85 82 82 ALA ALA A . n A 1 86 TRP 86 83 83 TRP TRP A . n A 1 87 GLU 87 84 84 GLU GLU A . n A 1 88 GLY 88 85 85 GLY GLY A . n A 1 89 LEU 89 86 86 LEU LEU A . n A 1 90 GLY 90 87 87 GLY GLY A . n A 1 91 TYR 91 88 88 TYR TYR A . n A 1 92 TYR 92 89 89 TYR TYR A . n A 1 93 SER 93 90 90 SER SER A . n A 1 94 ARG 94 91 91 ARG ARG A . n A 1 95 VAL 95 92 92 VAL VAL A . n A 1 96 ARG 96 93 93 ARG ARG A . n A 1 97 ASN 97 94 94 ASN ASN A . n A 1 98 LEU 98 95 95 LEU LEU A . n A 1 99 HIS 99 96 96 HIS HIS A . n A 1 100 ALA 100 97 97 ALA ALA A . n A 1 101 ALA 101 98 98 ALA ALA A . n A 1 102 VAL 102 99 99 VAL VAL A . n A 1 103 LYS 103 100 100 LYS LYS A . n A 1 104 GLU 104 101 101 GLU GLU A . n A 1 105 VAL 105 102 102 VAL VAL A . n A 1 106 LYS 106 103 103 LYS LYS A . n A 1 107 THR 107 104 104 THR THR A . n A 1 108 ARG 108 105 105 ARG ARG A . n A 1 109 TYR 109 106 106 TYR TYR A . n A 1 110 GLY 110 107 107 GLY GLY A . n A 1 111 GLY 111 108 108 GLY GLY A . n A 1 112 LYS 112 109 109 LYS LYS A . n A 1 113 VAL 113 110 110 VAL VAL A . n A 1 114 PRO 114 111 111 PRO PRO A . n A 1 115 ASP 115 112 112 ASP ASP A . n A 1 116 ASP 116 113 113 ASP ASP A . n A 1 117 PRO 117 114 114 PRO PRO A . n A 1 118 ASP 118 115 115 ASP ASP A . n A 1 119 GLU 119 116 116 GLU GLU A . n A 1 120 PHE 120 117 117 PHE PHE A . n A 1 121 SER 121 118 118 SER SER A . n A 1 122 ARG 122 119 119 ARG ARG A . n A 1 123 LEU 123 120 120 LEU LEU A . n A 1 124 LYS 124 121 121 LYS LYS A . n A 1 125 GLY 125 122 122 GLY GLY A . n A 1 126 VAL 126 123 123 VAL VAL A . n A 1 127 GLY 127 124 124 GLY GLY A . n A 1 128 PRO 128 125 125 PRO PRO A . n A 1 129 TYR 129 126 126 TYR TYR A . n A 1 130 THR 130 127 127 THR THR A . n A 1 131 VAL 131 128 128 VAL VAL A . n A 1 132 GLY 132 129 129 GLY GLY A . n A 1 133 ALA 133 130 130 ALA ALA A . n A 1 134 VAL 134 131 131 VAL VAL A . n A 1 135 LEU 135 132 132 LEU LEU A . n A 1 136 SER 136 133 133 SER SER A . n A 1 137 LEU 137 134 134 LEU LEU A . n A 1 138 ALA 138 135 135 ALA ALA A . n A 1 139 TYR 139 136 136 TYR TYR A . n A 1 140 GLY 140 137 137 GLY GLY A . n A 1 141 VAL 141 138 138 VAL VAL A . n A 1 142 PRO 142 139 139 PRO PRO A . n A 1 143 GLU 143 140 140 GLU GLU A . n A 1 144 PRO 144 141 141 PRO PRO A . n A 1 145 ALA 145 142 142 ALA ALA A . n A 1 146 VAL 146 143 143 VAL VAL A . n A 1 147 ASP 147 144 144 ASP ASP A . n A 1 148 GLY 148 145 145 GLY GLY A . n A 1 149 ASN 149 146 146 ASN ASN A . n A 1 150 VAL 150 147 147 VAL VAL A . n A 1 151 MET 151 148 148 MET MET A . n A 1 152 ARG 152 149 149 ARG ARG A . n A 1 153 VAL 153 150 150 VAL VAL A . n A 1 154 LEU 154 151 151 LEU LEU A . n A 1 155 SER 155 152 152 SER SER A . n A 1 156 ARG 156 153 153 ARG ARG A . n A 1 157 LEU 157 154 154 LEU LEU A . n A 1 158 PHE 158 155 155 PHE PHE A . n A 1 159 LEU 159 156 156 LEU LEU A . n A 1 160 VAL 160 157 157 VAL VAL A . n A 1 161 THR 161 158 158 THR THR A . n A 1 162 ASP 162 159 159 ASP ASP A . n A 1 163 ASP 163 160 160 ASP ASP A . n A 1 164 ILE 164 161 161 ILE ILE A . n A 1 165 ALA 165 162 162 ALA ALA A . n A 1 166 LYS 166 163 163 LYS LYS A . n A 1 167 PRO 167 164 164 PRO PRO A . n A 1 168 SER 168 165 165 SER SER A . n A 1 169 THR 169 166 166 THR THR A . n A 1 170 ARG 170 167 167 ARG ARG A . n A 1 171 LYS 171 168 168 LYS LYS A . n A 1 172 ARG 172 169 169 ARG ARG A . n A 1 173 PHE 173 170 170 PHE PHE A . n A 1 174 GLU 174 171 171 GLU GLU A . n A 1 175 GLN 175 172 172 GLN GLN A . n A 1 176 ILE 176 173 173 ILE ILE A . n A 1 177 VAL 177 174 174 VAL VAL A . n A 1 178 ARG 178 175 175 ARG ARG A . n A 1 179 GLU 179 176 176 GLU GLU A . n A 1 180 ILE 180 177 177 ILE ILE A . n A 1 181 MET 181 178 178 MET MET A . n A 1 182 ALA 182 179 179 ALA ALA A . n A 1 183 TYR 183 180 180 TYR TYR A . n A 1 184 GLU 184 181 181 GLU GLU A . n A 1 185 ASN 185 182 182 ASN ASN A . n A 1 186 PRO 186 183 183 PRO PRO A . n A 1 187 GLY 187 184 184 GLY GLY A . n A 1 188 ALA 188 185 185 ALA ALA A . n A 1 189 PHE 189 186 186 PHE PHE A . n A 1 190 ASN 190 187 187 ASN ASN A . n A 1 191 GLU 191 188 188 GLU GLU A . n A 1 192 ALA 192 189 189 ALA ALA A . n A 1 193 LEU 193 190 190 LEU LEU A . n A 1 194 ILE 194 191 191 ILE ILE A . n A 1 195 GLU 195 192 192 GLU GLU A . n A 1 196 LEU 196 193 193 LEU LEU A . n A 1 197 GLY 197 194 194 GLY GLY A . n A 1 198 ALA 198 195 195 ALA ALA A . n A 1 199 LEU 199 196 196 LEU LEU A . n A 1 200 VAL 200 197 197 VAL VAL A . n A 1 201 CYS 201 198 198 CYS CYS A . n A 1 202 THR 202 199 199 THR THR A . n A 1 203 PRO 203 200 200 PRO PRO A . n A 1 204 ARG 204 201 201 ARG ARG A . n A 1 205 ARG 205 202 202 ARG ARG A . n A 1 206 PRO 206 203 203 PRO PRO A . n A 1 207 SER 207 204 204 SER SER A . n A 1 208 CYS 208 205 205 CYS CYS A . n A 1 209 LEU 209 206 206 LEU LEU A . n A 1 210 LEU 210 207 207 LEU LEU A . n A 1 211 CYS 211 208 208 CYS CYS A . n A 1 212 PRO 212 209 209 PRO PRO A . n A 1 213 VAL 213 210 210 VAL VAL A . n A 1 214 GLN 214 211 211 GLN GLN A . n A 1 215 ALA 215 212 212 ALA ALA A . n A 1 216 TYR 216 213 213 TYR TYR A . n A 1 217 CYS 217 214 214 CYS CYS A . n A 1 218 GLN 218 215 215 GLN GLN A . n A 1 219 ALA 219 216 216 ALA ALA A . n A 1 220 PHE 220 217 217 PHE PHE A . n A 1 221 ALA 221 218 218 ALA ALA A . n A 1 222 GLU 222 219 219 GLU GLU A . n A 1 223 GLY 223 220 220 GLY GLY A . n A 1 224 VAL 224 221 221 VAL VAL A . n A 1 225 ALA 225 222 222 ALA ALA A . n A 1 226 GLU 226 223 223 GLU GLU A . n A 1 227 GLU 227 224 224 GLU GLU A . n A 1 228 LEU 228 225 225 LEU LEU A . n A 1 229 PRO 229 226 226 PRO PRO A . n A 1 230 VAL 230 227 227 VAL VAL A . n A 1 231 LYS 231 228 228 LYS LYS A . n A 1 232 MET 232 229 229 MET MET A . n A 1 233 LYS 233 230 230 LYS LYS A . n A 1 234 LYS 234 231 231 LYS LYS A . n A 1 235 THR 235 232 232 THR THR A . n A 1 236 ALA 236 233 233 ALA ALA A . n A 1 237 VAL 237 234 234 VAL VAL A . n A 1 238 LYS 238 235 235 LYS LYS A . n A 1 239 GLN 239 236 236 GLN GLN A . n A 1 240 VAL 240 237 237 VAL VAL A . n A 1 241 PRO 241 238 238 PRO PRO A . n A 1 242 LEU 242 239 239 LEU LEU A . n A 1 243 ALA 243 240 240 ALA ALA A . n A 1 244 VAL 244 241 241 VAL VAL A . n A 1 245 ALA 245 242 242 ALA ALA A . n A 1 246 VAL 246 243 243 VAL VAL A . n A 1 247 LEU 247 244 244 LEU LEU A . n A 1 248 ALA 248 245 245 ALA ALA A . n A 1 249 ASP 249 246 246 ASP ASP A . n A 1 250 ASP 250 247 247 ASP ASP A . n A 1 251 GLU 251 248 248 GLU GLU A . n A 1 252 GLY 252 249 249 GLY GLY A . n A 1 253 ARG 253 250 250 ARG ARG A . n A 1 254 VAL 254 251 251 VAL VAL A . n A 1 255 LEU 255 252 252 LEU LEU A . n A 1 256 ILE 256 253 253 ILE ILE A . n A 1 257 ARG 257 254 254 ARG ARG A . n A 1 258 LYS 258 255 255 LYS LYS A . n A 1 259 ARG 259 256 256 ARG ARG A . n A 1 260 ASP 260 257 257 ASP ASP A . n A 1 261 SER 261 258 258 SER SER A . n A 1 262 THR 262 259 259 THR THR A . n A 1 263 GLY 263 260 260 GLY GLY A . n A 1 264 LEU 264 261 261 LEU LEU A . n A 1 265 LEU 265 262 262 LEU LEU A . n A 1 266 ALA 266 263 263 ALA ALA A . n A 1 267 ASN 267 264 264 ASN ASN A . n A 1 268 LEU 268 265 265 LEU LEU A . n A 1 269 TRP 269 266 266 TRP TRP A . n A 1 270 GLU 270 267 267 GLU GLU A . n A 1 271 PHE 271 268 268 PHE PHE A . n A 1 272 PRO 272 269 269 PRO PRO A . n A 1 273 SER 273 270 270 SER SER A . n A 1 274 CYS 274 271 271 CYS CYS A . n A 1 275 GLU 275 272 272 GLU GLU A . n A 1 276 THR 276 273 273 THR THR A . n A 1 277 ASP 277 274 274 ASP ASP A . n A 1 278 GLY 278 275 275 GLY GLY A . n A 1 279 ALA 279 276 276 ALA ALA A . n A 1 280 ASP 280 277 277 ASP ASP A . n A 1 281 GLY 281 278 278 GLY GLY A . n A 1 282 LYS 282 279 279 LYS LYS A . n A 1 283 GLU 283 280 280 GLU GLU A . n A 1 284 LYS 284 281 281 LYS LYS A . n A 1 285 LEU 285 282 282 LEU LEU A . n A 1 286 GLU 286 283 283 GLU GLU A . n A 1 287 GLN 287 284 284 GLN GLN A . n A 1 288 MET 288 285 285 MET MET A . n A 1 289 VAL 289 286 286 VAL VAL A . n A 1 290 GLY 290 287 287 GLY GLY A . n A 1 291 GLU 291 288 288 GLU GLU A . n A 1 292 GLN 292 289 289 GLN GLN A . n A 1 293 TYR 293 290 ? ? ? A . n A 1 294 GLY 294 291 ? ? ? A . n A 1 295 LEU 295 292 ? ? ? A . n A 1 296 GLN 296 293 ? ? ? A . n A 1 297 VAL 297 294 ? ? ? A . n A 1 298 GLU 298 295 295 GLU GLU A . n A 1 299 LEU 299 296 296 LEU LEU A . n A 1 300 THR 300 297 297 THR THR A . n A 1 301 GLU 301 298 298 GLU GLU A . n A 1 302 PRO 302 299 299 PRO PRO A . n A 1 303 ILE 303 300 300 ILE ILE A . n A 1 304 VAL 304 301 301 VAL VAL A . n A 1 305 SER 305 302 302 SER SER A . n A 1 306 PHE 306 303 303 PHE PHE A . n A 1 307 GLU 307 304 304 GLU GLU A . n A 1 308 HIS 308 305 305 HIS HIS A . n A 1 309 ALA 309 306 306 ALA ALA A . n A 1 310 PHE 310 307 307 PHE PHE A . n A 1 311 SER 311 308 308 SER SER A . n A 1 312 HIS 312 309 309 HIS HIS A . n A 1 313 LEU 313 310 310 LEU LEU A . n A 1 314 VAL 314 311 311 VAL VAL A . n A 1 315 TRP 315 312 312 TRP TRP A . n A 1 316 GLN 316 313 313 GLN GLN A . n A 1 317 LEU 317 314 314 LEU LEU A . n A 1 318 THR 318 315 315 THR THR A . n A 1 319 VAL 319 316 316 VAL VAL A . n A 1 320 PHE 320 317 317 PHE PHE A . n A 1 321 PRO 321 318 318 PRO PRO A . n A 1 322 GLY 322 319 319 GLY GLY A . n A 1 323 ARG 323 320 320 ARG ARG A . n A 1 324 LEU 324 321 321 LEU LEU A . n A 1 325 VAL 325 322 322 VAL VAL A . n A 1 326 HIS 326 323 323 HIS HIS A . n A 1 327 GLY 327 324 324 GLY GLY A . n A 1 328 GLY 328 325 325 GLY GLY A . n A 1 329 PRO 329 326 326 PRO PRO A . n A 1 330 VAL 330 327 327 VAL VAL A . n A 1 331 GLU 331 328 328 GLU GLU A . n A 1 332 GLU 332 329 329 GLU GLU A . n A 1 333 PRO 333 330 330 PRO PRO A . n A 1 334 TYR 334 331 331 TYR TYR A . n A 1 335 ARG 335 332 332 ARG ARG A . n A 1 336 LEU 336 333 333 LEU LEU A . n A 1 337 ALA 337 334 334 ALA ALA A . n A 1 338 PRO 338 335 335 PRO PRO A . n A 1 339 GLU 339 336 336 GLU GLU A . n A 1 340 ASP 340 337 337 ASP ASP A . n A 1 341 GLU 341 338 338 GLU GLU A . n A 1 342 LEU 342 339 339 LEU LEU A . n A 1 343 LYS 343 340 340 LYS LYS A . n A 1 344 ALA 344 341 341 ALA ALA A . n A 1 345 TYR 345 342 342 TYR TYR A . n A 1 346 ALA 346 343 343 ALA ALA A . n A 1 347 PHE 347 344 344 PHE PHE A . n A 1 348 PRO 348 345 345 PRO PRO A . n A 1 349 VAL 349 346 346 VAL VAL A . n A 1 350 SER 350 347 347 SER SER A . n A 1 351 HIS 351 348 348 HIS HIS A . n A 1 352 GLN 352 349 349 GLN GLN A . n A 1 353 ARG 353 350 350 ARG ARG A . n A 1 354 VAL 354 351 351 VAL VAL A . n A 1 355 TRP 355 352 352 TRP TRP A . n A 1 356 ARG 356 353 353 ARG ARG A . n A 1 357 GLU 357 354 354 GLU GLU A . n A 1 358 TYR 358 355 355 TYR TYR A . n A 1 359 LYS 359 356 356 LYS LYS A . n A 1 360 GLU 360 357 357 GLU GLU A . n A 1 361 TRP 361 358 358 TRP TRP A . n A 1 362 ALA 362 359 359 ALA ALA A . n A 1 363 SER 363 360 360 SER SER A . n A 1 364 GLY 364 361 ? ? ? A . n A 1 365 VAL 365 362 ? ? ? A . n A 1 366 ARG 366 363 ? ? ? A . n A 1 367 PRO 367 364 ? ? ? A . n A 1 368 PRO 368 365 ? ? ? A . n A 1 369 PRO 369 366 ? ? ? A . n B 2 1 DA 1 1 1 DA DA B . n B 2 2 DA 2 2 2 DA DA B . n B 2 3 DG 3 3 3 DG DG B . n B 2 4 DA 4 4 4 DA DA B . n B 2 5 DC 5 5 5 DC DC B . n B 2 6 8OG 6 6 6 8OG 8OG B . n B 2 7 DT 7 7 7 DT DT B . n B 2 8 DG 8 8 8 DG DG B . n B 2 9 DG 9 9 9 DG DG B . n B 2 10 DA 10 10 10 DA DA B . n B 2 11 DC 11 11 11 DC DC B . n C 3 1 DT 1 12 ? ? ? C . n C 3 2 DG 2 13 13 DG DG C . n C 3 3 DT 3 14 14 DT DT C . n C 3 4 DC 4 15 15 DC DC C . n C 3 5 DC 5 16 16 DC DC C . n C 3 6 DA 6 17 17 DA DA C . n C 3 7 NRI 7 18 18 NRI NRI C . n C 3 8 DG 8 19 19 DG DG C . n C 3 9 DT 9 20 20 DT DT C . n C 3 10 DC 10 21 21 DC DC C . n C 3 11 DT 11 22 22 DT DT C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 SF4 1 400 400 SF4 SF4 A . E 5 CA 1 501 501 CA CA A . F 6 HOH 1 401 401 HOH HOH A . F 6 HOH 2 402 402 HOH HOH A . F 6 HOH 3 403 501 HOH HOH A . F 6 HOH 4 404 404 HOH HOH A . F 6 HOH 5 405 405 HOH HOH A . F 6 HOH 6 409 409 HOH HOH A . F 6 HOH 7 413 413 HOH HOH A . F 6 HOH 8 414 414 HOH HOH A . F 6 HOH 9 416 416 HOH HOH A . F 6 HOH 10 417 417 HOH HOH A . F 6 HOH 11 418 418 HOH HOH A . F 6 HOH 12 420 420 HOH HOH A . F 6 HOH 13 421 421 HOH HOH A . F 6 HOH 14 422 422 HOH HOH A . F 6 HOH 15 423 423 HOH HOH A . F 6 HOH 16 424 424 HOH HOH A . F 6 HOH 17 425 425 HOH HOH A . F 6 HOH 18 427 427 HOH HOH A . F 6 HOH 19 428 428 HOH HOH A . F 6 HOH 20 429 429 HOH HOH A . F 6 HOH 21 430 430 HOH HOH A . F 6 HOH 22 432 432 HOH HOH A . F 6 HOH 23 433 433 HOH HOH A . F 6 HOH 24 434 434 HOH HOH A . F 6 HOH 25 437 437 HOH HOH A . F 6 HOH 26 438 438 HOH HOH A . F 6 HOH 27 441 441 HOH HOH A . F 6 HOH 28 446 446 HOH HOH A . F 6 HOH 29 448 448 HOH HOH A . F 6 HOH 30 449 449 HOH HOH A . F 6 HOH 31 450 450 HOH HOH A . F 6 HOH 32 451 451 HOH HOH A . F 6 HOH 33 453 453 HOH HOH A . F 6 HOH 34 455 455 HOH HOH A . F 6 HOH 35 456 456 HOH HOH A . F 6 HOH 36 457 457 HOH HOH A . F 6 HOH 37 458 458 HOH HOH A . F 6 HOH 38 459 459 HOH HOH A . F 6 HOH 39 460 460 HOH HOH A . F 6 HOH 40 462 462 HOH HOH A . F 6 HOH 41 463 463 HOH HOH A . F 6 HOH 42 464 464 HOH HOH A . F 6 HOH 43 465 465 HOH HOH A . F 6 HOH 44 466 466 HOH HOH A . F 6 HOH 45 467 467 HOH HOH A . F 6 HOH 46 468 468 HOH HOH A . F 6 HOH 47 469 469 HOH HOH A . F 6 HOH 48 470 470 HOH HOH A . F 6 HOH 49 471 471 HOH HOH A . F 6 HOH 50 472 472 HOH HOH A . F 6 HOH 51 473 473 HOH HOH A . F 6 HOH 52 474 474 HOH HOH A . F 6 HOH 53 475 475 HOH HOH A . F 6 HOH 54 476 476 HOH HOH A . F 6 HOH 55 477 477 HOH HOH A . F 6 HOH 56 478 478 HOH HOH A . F 6 HOH 57 479 479 HOH HOH A . F 6 HOH 58 483 483 HOH HOH A . F 6 HOH 59 484 484 HOH HOH A . F 6 HOH 60 485 485 HOH HOH A . F 6 HOH 61 486 486 HOH HOH A . F 6 HOH 62 488 488 HOH HOH A . F 6 HOH 63 489 489 HOH HOH A . F 6 HOH 64 494 494 HOH HOH A . F 6 HOH 65 495 495 HOH HOH A . F 6 HOH 66 496 496 HOH HOH A . F 6 HOH 67 497 497 HOH HOH A . F 6 HOH 68 498 498 HOH HOH A . F 6 HOH 69 499 499 HOH HOH A . F 6 HOH 70 502 502 HOH HOH A . F 6 HOH 71 503 503 HOH HOH A . F 6 HOH 72 505 505 HOH HOH A . F 6 HOH 73 507 507 HOH HOH A . F 6 HOH 74 508 508 HOH HOH A . F 6 HOH 75 509 509 HOH HOH A . F 6 HOH 76 510 510 HOH HOH A . F 6 HOH 77 511 511 HOH HOH A . F 6 HOH 78 512 512 HOH HOH A . F 6 HOH 79 513 513 HOH HOH A . F 6 HOH 80 514 514 HOH HOH A . F 6 HOH 81 515 515 HOH HOH A . F 6 HOH 82 517 517 HOH HOH A . F 6 HOH 83 519 519 HOH HOH A . F 6 HOH 84 520 520 HOH HOH A . F 6 HOH 85 521 521 HOH HOH A . F 6 HOH 86 522 522 HOH HOH A . F 6 HOH 87 523 523 HOH HOH A . F 6 HOH 88 524 524 HOH HOH A . F 6 HOH 89 526 526 HOH HOH A . F 6 HOH 90 530 530 HOH HOH A . F 6 HOH 91 531 531 HOH HOH A . F 6 HOH 92 532 532 HOH HOH A . F 6 HOH 93 533 533 HOH HOH A . F 6 HOH 94 534 534 HOH HOH A . F 6 HOH 95 535 535 HOH HOH A . F 6 HOH 96 536 536 HOH HOH A . G 6 HOH 1 408 408 HOH HOH B . G 6 HOH 2 419 419 HOH HOH B . G 6 HOH 3 426 426 HOH HOH B . G 6 HOH 4 431 431 HOH HOH B . G 6 HOH 5 435 435 HOH HOH B . G 6 HOH 6 436 436 HOH HOH B . G 6 HOH 7 439 439 HOH HOH B . G 6 HOH 8 440 440 HOH HOH B . G 6 HOH 9 444 444 HOH HOH B . G 6 HOH 10 445 445 HOH HOH B . G 6 HOH 11 447 447 HOH HOH B . G 6 HOH 12 452 452 HOH HOH B . G 6 HOH 13 454 454 HOH HOH B . G 6 HOH 14 461 461 HOH HOH B . G 6 HOH 15 480 480 HOH HOH B . G 6 HOH 16 490 490 HOH HOH B . G 6 HOH 17 500 500 HOH HOH B . G 6 HOH 18 504 504 HOH HOH B . G 6 HOH 19 516 516 HOH HOH B . G 6 HOH 20 525 525 HOH HOH B . G 6 HOH 21 527 527 HOH HOH B . G 6 HOH 22 528 528 HOH HOH B . H 6 HOH 1 403 403 HOH HOH C . H 6 HOH 2 406 406 HOH HOH C . H 6 HOH 3 407 407 HOH HOH C . H 6 HOH 4 410 410 HOH HOH C . H 6 HOH 5 411 411 HOH HOH C . H 6 HOH 6 412 412 HOH HOH C . H 6 HOH 7 415 415 HOH HOH C . H 6 HOH 8 442 442 HOH HOH C . H 6 HOH 9 443 443 HOH HOH C . H 6 HOH 10 481 481 HOH HOH C . H 6 HOH 11 482 482 HOH HOH C . H 6 HOH 12 487 487 HOH HOH C . H 6 HOH 13 491 491 HOH HOH C . H 6 HOH 14 492 492 HOH HOH C . H 6 HOH 15 493 493 HOH HOH C . H 6 HOH 16 506 506 HOH HOH C . H 6 HOH 17 518 518 HOH HOH C . H 6 HOH 18 529 529 HOH HOH C . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id 8OG _pdbx_struct_mod_residue.label_seq_id 6 _pdbx_struct_mod_residue.auth_asym_id B _pdbx_struct_mod_residue.auth_comp_id 8OG _pdbx_struct_mod_residue.auth_seq_id 6 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DG _pdbx_struct_mod_residue.details ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5320 ? 1 MORE -50 ? 1 'SSA (A^2)' 18000 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A SER 121 ? A SER 118 ? 1_555 CA ? E CA . ? A CA 501 ? 1_555 OG ? A SER 121 ? A SER 118 ? 1_555 69.3 ? 2 O ? A SER 121 ? A SER 118 ? 1_555 CA ? E CA . ? A CA 501 ? 1_555 O ? A VAL 126 ? A VAL 123 ? 1_555 97.4 ? 3 OG ? A SER 121 ? A SER 118 ? 1_555 CA ? E CA . ? A CA 501 ? 1_555 O ? A VAL 126 ? A VAL 123 ? 1_555 105.4 ? 4 O ? A SER 121 ? A SER 118 ? 1_555 CA ? E CA . ? A CA 501 ? 1_555 O ? F HOH . ? A HOH 405 ? 1_555 147.0 ? 5 OG ? A SER 121 ? A SER 118 ? 1_555 CA ? E CA . ? A CA 501 ? 1_555 O ? F HOH . ? A HOH 405 ? 1_555 79.3 ? 6 O ? A VAL 126 ? A VAL 123 ? 1_555 CA ? E CA . ? A CA 501 ? 1_555 O ? F HOH . ? A HOH 405 ? 1_555 100.3 ? 7 O ? A SER 121 ? A SER 118 ? 1_555 CA ? E CA . ? A CA 501 ? 1_555 O ? H HOH . ? C HOH 493 ? 1_555 136.9 ? 8 OG ? A SER 121 ? A SER 118 ? 1_555 CA ? E CA . ? A CA 501 ? 1_555 O ? H HOH . ? C HOH 493 ? 1_555 150.9 ? 9 O ? A VAL 126 ? A VAL 123 ? 1_555 CA ? E CA . ? A CA 501 ? 1_555 O ? H HOH . ? C HOH 493 ? 1_555 86.0 ? 10 O ? F HOH . ? A HOH 405 ? 1_555 CA ? E CA . ? A CA 501 ? 1_555 O ? H HOH . ? C HOH 493 ? 1_555 72.3 ? 11 O ? A SER 121 ? A SER 118 ? 1_555 CA ? E CA . ? A CA 501 ? 1_555 O ? F HOH . ? A HOH 427 ? 1_555 70.1 ? 12 OG ? A SER 121 ? A SER 118 ? 1_555 CA ? E CA . ? A CA 501 ? 1_555 O ? F HOH . ? A HOH 427 ? 1_555 138.7 ? 13 O ? A VAL 126 ? A VAL 123 ? 1_555 CA ? E CA . ? A CA 501 ? 1_555 O ? F HOH . ? A HOH 427 ? 1_555 73.2 ? 14 O ? F HOH . ? A HOH 405 ? 1_555 CA ? E CA . ? A CA 501 ? 1_555 O ? F HOH . ? A HOH 427 ? 1_555 142.0 ? 15 O ? H HOH . ? C HOH 493 ? 1_555 CA ? E CA . ? A CA 501 ? 1_555 O ? F HOH . ? A HOH 427 ? 1_555 70.0 ? 16 SG ? A CYS 201 ? A CYS 198 ? 1_555 FE3 ? D SF4 . ? A SF4 400 ? 1_555 S1 ? D SF4 . ? A SF4 400 ? 1_555 134.0 ? 17 SG ? A CYS 201 ? A CYS 198 ? 1_555 FE3 ? D SF4 . ? A SF4 400 ? 1_555 S2 ? D SF4 . ? A SF4 400 ? 1_555 97.5 ? 18 S1 ? D SF4 . ? A SF4 400 ? 1_555 FE3 ? D SF4 . ? A SF4 400 ? 1_555 S2 ? D SF4 . ? A SF4 400 ? 1_555 112.5 ? 19 SG ? A CYS 201 ? A CYS 198 ? 1_555 FE3 ? D SF4 . ? A SF4 400 ? 1_555 S4 ? D SF4 . ? A SF4 400 ? 1_555 112.9 ? 20 S1 ? D SF4 . ? A SF4 400 ? 1_555 FE3 ? D SF4 . ? A SF4 400 ? 1_555 S4 ? D SF4 . ? A SF4 400 ? 1_555 92.6 ? 21 S2 ? D SF4 . ? A SF4 400 ? 1_555 FE3 ? D SF4 . ? A SF4 400 ? 1_555 S4 ? D SF4 . ? A SF4 400 ? 1_555 105.3 ? 22 SG ? A CYS 208 ? A CYS 205 ? 1_555 FE2 ? D SF4 . ? A SF4 400 ? 1_555 S1 ? D SF4 . ? A SF4 400 ? 1_555 86.7 ? 23 SG ? A CYS 208 ? A CYS 205 ? 1_555 FE2 ? D SF4 . ? A SF4 400 ? 1_555 S3 ? D SF4 . ? A SF4 400 ? 1_555 155.4 ? 24 S1 ? D SF4 . ? A SF4 400 ? 1_555 FE2 ? D SF4 . ? A SF4 400 ? 1_555 S3 ? D SF4 . ? A SF4 400 ? 1_555 104.6 ? 25 SG ? A CYS 208 ? A CYS 205 ? 1_555 FE2 ? D SF4 . ? A SF4 400 ? 1_555 S4 ? D SF4 . ? A SF4 400 ? 1_555 90.0 ? 26 S1 ? D SF4 . ? A SF4 400 ? 1_555 FE2 ? D SF4 . ? A SF4 400 ? 1_555 S4 ? D SF4 . ? A SF4 400 ? 1_555 91.5 ? 27 S3 ? D SF4 . ? A SF4 400 ? 1_555 FE2 ? D SF4 . ? A SF4 400 ? 1_555 S4 ? D SF4 . ? A SF4 400 ? 1_555 111.1 ? 28 SG ? A CYS 211 ? A CYS 208 ? 1_555 FE1 ? D SF4 . ? A SF4 400 ? 1_555 S2 ? D SF4 . ? A SF4 400 ? 1_555 112.9 ? 29 SG ? A CYS 211 ? A CYS 208 ? 1_555 FE1 ? D SF4 . ? A SF4 400 ? 1_555 S3 ? D SF4 . ? A SF4 400 ? 1_555 104.8 ? 30 S2 ? D SF4 . ? A SF4 400 ? 1_555 FE1 ? D SF4 . ? A SF4 400 ? 1_555 S3 ? D SF4 . ? A SF4 400 ? 1_555 102.9 ? 31 SG ? A CYS 211 ? A CYS 208 ? 1_555 FE1 ? D SF4 . ? A SF4 400 ? 1_555 S4 ? D SF4 . ? A SF4 400 ? 1_555 121.0 ? 32 S2 ? D SF4 . ? A SF4 400 ? 1_555 FE1 ? D SF4 . ? A SF4 400 ? 1_555 S4 ? D SF4 . ? A SF4 400 ? 1_555 102.3 ? 33 S3 ? D SF4 . ? A SF4 400 ? 1_555 FE1 ? D SF4 . ? A SF4 400 ? 1_555 S4 ? D SF4 . ? A SF4 400 ? 1_555 111.6 ? 34 SG ? A CYS 217 ? A CYS 214 ? 1_555 FE4 ? D SF4 . ? A SF4 400 ? 1_555 S1 ? D SF4 . ? A SF4 400 ? 1_555 94.5 ? 35 SG ? A CYS 217 ? A CYS 214 ? 1_555 FE4 ? D SF4 . ? A SF4 400 ? 1_555 S2 ? D SF4 . ? A SF4 400 ? 1_555 139.0 ? 36 S1 ? D SF4 . ? A SF4 400 ? 1_555 FE4 ? D SF4 . ? A SF4 400 ? 1_555 S2 ? D SF4 . ? A SF4 400 ? 1_555 108.4 ? 37 SG ? A CYS 217 ? A CYS 214 ? 1_555 FE4 ? D SF4 . ? A SF4 400 ? 1_555 S3 ? D SF4 . ? A SF4 400 ? 1_555 105.1 ? 38 S1 ? D SF4 . ? A SF4 400 ? 1_555 FE4 ? D SF4 . ? A SF4 400 ? 1_555 S3 ? D SF4 . ? A SF4 400 ? 1_555 100.3 ? 39 S2 ? D SF4 . ? A SF4 400 ? 1_555 FE4 ? D SF4 . ? A SF4 400 ? 1_555 S3 ? D SF4 . ? A SF4 400 ? 1_555 103.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-01-19 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2015-09-23 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 3 'Structure model' repository Obsolete ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal BLUE 'data collection' ICE ? 1 CNS 'model building' . ? 2 CNS refinement 1.2 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 CNS phasing . ? 6 # _pdbx_entry_details.sequence_details ;Author states that the reference sequence (UNP P83847) is based on a catalytically inactive mutant MutY (D144N). The SEQRES record represent the wild-type sequence. ; _pdbx_entry_details.entry_id 3FSQ _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ALA _pdbx_validate_close_contact.auth_seq_id_1 10 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 NE2 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 GLN _pdbx_validate_close_contact.auth_seq_id_2 14 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.08 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" B DA 2 ? ? "C2'" B DA 2 ? ? "C1'" B DA 2 ? ? 97.36 102.40 -5.04 0.80 N 2 1 "O4'" B DA 2 ? ? "C1'" B DA 2 ? ? N9 B DA 2 ? ? 111.90 108.30 3.60 0.30 N 3 1 "O4'" B DC 5 ? ? "C1'" B DC 5 ? ? N1 B DC 5 ? ? 112.27 108.30 3.97 0.30 N 4 1 "C1'" B DT 7 ? ? "O4'" B DT 7 ? ? "C4'" B DT 7 ? ? 102.60 110.10 -7.50 1.00 N 5 1 "O4'" B DT 7 ? ? "C1'" B DT 7 ? ? N1 B DT 7 ? ? 110.24 108.30 1.94 0.30 N 6 1 "O4'" B DG 9 ? ? "C1'" B DG 9 ? ? N9 B DG 9 ? ? 110.67 108.30 2.37 0.30 N 7 1 "C3'" C DC 16 ? ? "C2'" C DC 16 ? ? "C1'" C DC 16 ? ? 96.74 102.40 -5.66 0.80 N 8 1 "O4'" C DC 16 ? ? "C1'" C DC 16 ? ? N1 C DC 16 ? ? 112.61 108.30 4.31 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 9 ? ? -68.40 72.98 2 1 ARG A 11 ? ? -172.53 -47.18 3 1 GLN A 14 ? ? -58.61 -1.08 4 1 LEU A 17 ? ? -92.04 -60.54 5 1 TYR A 88 ? ? 35.68 69.64 6 1 LYS A 103 ? ? -86.33 -74.10 7 1 PRO A 111 ? ? -44.56 150.82 8 1 SER A 118 ? ? -61.92 2.72 9 1 PRO A 139 ? ? -73.53 24.04 10 1 VAL A 197 ? ? -96.97 -69.50 11 1 ARG A 202 ? ? 34.68 68.08 12 1 MET A 229 ? ? -35.87 132.71 13 1 LYS A 230 ? ? -55.46 -162.98 14 1 ASP A 274 ? ? 65.17 -96.56 15 1 ASP A 277 ? ? 146.40 31.48 16 1 THR A 297 ? ? -104.52 -110.23 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 103 ? CE ? A LYS 106 CE 2 1 Y 1 A LYS 103 ? NZ ? A LYS 106 NZ 3 1 Y 1 A GLU 116 ? CG ? A GLU 119 CG 4 1 Y 1 A GLU 116 ? CD ? A GLU 119 CD 5 1 Y 1 A GLU 116 ? OE1 ? A GLU 119 OE1 6 1 Y 1 A GLU 116 ? OE2 ? A GLU 119 OE2 7 1 Y 1 A GLN 172 ? CG ? A GLN 175 CG 8 1 Y 1 A GLN 172 ? CD ? A GLN 175 CD 9 1 Y 1 A GLN 172 ? OE1 ? A GLN 175 OE1 10 1 Y 1 A GLN 172 ? NE2 ? A GLN 175 NE2 11 1 Y 1 A LYS 228 ? CG ? A LYS 231 CG 12 1 Y 1 A LYS 228 ? CD ? A LYS 231 CD 13 1 Y 1 A LYS 228 ? CE ? A LYS 231 CE 14 1 Y 1 A LYS 228 ? NZ ? A LYS 231 NZ 15 1 Y 1 A LYS 230 ? CD ? A LYS 233 CD 16 1 Y 1 A LYS 230 ? CE ? A LYS 233 CE 17 1 Y 1 A LYS 230 ? NZ ? A LYS 233 NZ 18 1 Y 1 A LYS 231 ? CG ? A LYS 234 CG 19 1 Y 1 A LYS 231 ? CD ? A LYS 234 CD 20 1 Y 1 A LYS 231 ? CE ? A LYS 234 CE 21 1 Y 1 A LYS 231 ? NZ ? A LYS 234 NZ 22 1 Y 1 A GLU 248 ? CD ? A GLU 251 CD 23 1 Y 1 A GLU 248 ? OE1 ? A GLU 251 OE1 24 1 Y 1 A GLU 248 ? OE2 ? A GLU 251 OE2 25 1 Y 1 A LYS 279 ? CG ? A LYS 282 CG 26 1 Y 1 A LYS 279 ? CD ? A LYS 282 CD 27 1 Y 1 A LYS 279 ? CE ? A LYS 282 CE 28 1 Y 1 A LYS 279 ? NZ ? A LYS 282 NZ 29 1 Y 1 A GLN 289 ? CB ? A GLN 292 CB 30 1 Y 1 A GLN 289 ? CG ? A GLN 292 CG 31 1 Y 1 A GLN 289 ? CD ? A GLN 292 CD 32 1 Y 1 A GLN 289 ? OE1 ? A GLN 292 OE1 33 1 Y 1 A GLN 289 ? NE2 ? A GLN 292 NE2 34 1 Y 1 A GLU 295 ? CB ? A GLU 298 CB 35 1 Y 1 A GLU 295 ? CG ? A GLU 298 CG 36 1 Y 1 A GLU 295 ? CD ? A GLU 298 CD 37 1 Y 1 A GLU 295 ? OE1 ? A GLU 298 OE1 38 1 Y 1 A GLU 295 ? OE2 ? A GLU 298 OE2 39 1 Y 1 A GLU 328 ? CG ? A GLU 331 CG 40 1 Y 1 A GLU 328 ? CD ? A GLU 331 CD 41 1 Y 1 A GLU 328 ? OE1 ? A GLU 331 OE1 42 1 Y 1 A GLU 328 ? OE2 ? A GLU 331 OE2 43 1 Y 1 A GLU 329 ? CG ? A GLU 332 CG 44 1 Y 1 A GLU 329 ? CD ? A GLU 332 CD 45 1 Y 1 A GLU 329 ? OE1 ? A GLU 332 OE1 46 1 Y 1 A GLU 329 ? OE2 ? A GLU 332 OE2 47 1 Y 1 A ASP 337 ? CG ? A ASP 340 CG 48 1 Y 1 A ASP 337 ? OD1 ? A ASP 340 OD1 49 1 Y 1 A ASP 337 ? OD2 ? A ASP 340 OD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -2 ? A GLY 1 2 1 Y 1 A SER -1 ? A SER 2 3 1 Y 1 A HIS 0 ? A HIS 3 4 1 Y 1 A MET 1 ? A MET 4 5 1 Y 1 A THR 2 ? A THR 5 6 1 Y 1 A ARG 3 ? A ARG 6 7 1 Y 1 A GLU 4 ? A GLU 7 8 1 Y 1 A THR 5 ? A THR 8 9 1 Y 1 A GLU 6 ? A GLU 9 10 1 Y 1 A ARG 7 ? A ARG 10 11 1 Y 1 A TYR 290 ? A TYR 293 12 1 Y 1 A GLY 291 ? A GLY 294 13 1 Y 1 A LEU 292 ? A LEU 295 14 1 Y 1 A GLN 293 ? A GLN 296 15 1 Y 1 A VAL 294 ? A VAL 297 16 1 Y 1 A GLY 361 ? A GLY 364 17 1 Y 1 A VAL 362 ? A VAL 365 18 1 Y 1 A ARG 363 ? A ARG 366 19 1 Y 1 A PRO 364 ? A PRO 367 20 1 Y 1 A PRO 365 ? A PRO 368 21 1 Y 1 A PRO 366 ? A PRO 369 22 1 Y 1 C DT 12 ? C DT 1 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3FSQ 'double helix' 3FSQ 'b-form double helix' 3FSQ 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DA 2 1_555 C DT 11 1_555 -0.147 0.010 -0.026 2.618 -6.888 5.848 1 B_DA2:DT22_C B 2 ? C 22 ? 20 1 1 B DG 3 1_555 C DC 10 1_555 -0.203 -0.174 0.255 7.290 -6.232 -1.803 2 B_DG3:DC21_C B 3 ? C 21 ? 19 1 1 B DA 4 1_555 C DT 9 1_555 0.184 0.123 0.002 0.528 -6.325 4.151 3 B_DA4:DT20_C B 4 ? C 20 ? 20 1 1 B DC 5 1_555 C DG 8 1_555 0.209 0.067 -0.246 13.936 0.720 -0.093 4 B_DC5:DG19_C B 5 ? C 19 ? 19 1 1 B DT 7 1_555 C DA 6 1_555 -0.391 -0.020 0.141 -12.121 -12.694 3.965 5 B_DT7:DA17_C B 7 ? C 17 ? 20 1 1 B DG 8 1_555 C DC 5 1_555 0.072 -0.281 -0.426 -6.341 2.459 -5.034 6 B_DG8:DC16_C B 8 ? C 16 ? 19 1 1 B DG 9 1_555 C DC 4 1_555 0.214 -0.026 -0.248 5.676 -5.626 2.881 7 B_DG9:DC15_C B 9 ? C 15 ? 19 1 1 B DA 10 1_555 C DT 3 1_555 0.275 -0.066 -0.160 3.004 -3.974 7.382 8 B_DA10:DT14_C B 10 ? C 14 ? 20 1 1 B DC 11 1_555 C DG 2 1_555 0.156 0.065 -0.353 22.030 -8.682 -7.154 9 B_DC11:DG13_C B 11 ? C 13 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DA 2 1_555 C DT 11 1_555 B DG 3 1_555 C DC 10 1_555 -0.755 -0.100 3.185 -4.659 1.907 32.923 -0.488 0.549 3.247 3.340 8.162 33.295 1 BB_DA2DG3:DC21DT22_CC B 2 ? C 22 ? B 3 ? C 21 ? 1 B DG 3 1_555 C DC 10 1_555 B DA 4 1_555 C DT 9 1_555 0.299 -0.136 3.461 2.104 1.314 39.447 -0.365 -0.180 3.466 1.944 -3.113 39.522 2 BB_DG3DA4:DT20DC21_CC B 3 ? C 21 ? B 4 ? C 20 ? 1 B DA 4 1_555 C DT 9 1_555 B DC 5 1_555 C DG 8 1_555 0.575 -0.657 3.126 0.628 4.427 25.956 -2.559 -1.105 2.987 9.765 -1.386 26.332 3 BB_DA4DC5:DG19DT20_CC B 4 ? C 20 ? B 5 ? C 19 ? 1 B DT 7 1_555 C DA 6 1_555 B DG 8 1_555 C DC 5 1_555 0.410 0.484 3.254 4.089 3.720 38.078 0.268 -0.110 3.309 5.666 -6.227 38.463 4 BB_DT7DG8:DC16DA17_CC B 7 ? C 17 ? B 8 ? C 16 ? 1 B DG 8 1_555 C DC 5 1_555 B DG 9 1_555 C DC 4 1_555 -0.889 -0.369 3.047 -2.440 5.698 31.713 -1.606 1.196 2.996 10.304 4.412 32.298 5 BB_DG8DG9:DC15DC16_CC B 8 ? C 16 ? B 9 ? C 15 ? 1 B DG 9 1_555 C DC 4 1_555 B DA 10 1_555 C DT 3 1_555 0.185 -0.446 3.370 -1.566 3.509 31.536 -1.472 -0.632 3.290 6.426 2.869 31.763 6 BB_DG9DA10:DT14DC15_CC B 9 ? C 15 ? B 10 ? C 14 ? 1 B DA 10 1_555 C DT 3 1_555 B DC 11 1_555 C DG 2 1_555 0.476 -0.834 2.941 -0.895 -1.744 34.737 -1.154 -0.919 2.966 -2.918 1.497 34.790 7 BB_DA10DC11:DG13DT14_CC B 10 ? C 14 ? B 11 ? C 13 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'IRON/SULFUR CLUSTER' SF4 5 'CALCIUM ION' CA 6 water HOH #