HEADER IMMUNE SYSTEM 12-JAN-09 3FTG TITLE CRYSTAL STRUCTURE OF H2DB IN COMPLEX WITH NP366-N3A VARIANT PEPTIDE TITLE 2 FROM INFLUENZA COMPND MOL_ID: 1; COMPND 2 MOLECULE: H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, D-B ALPHA CHAIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: H-2D(B); COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: NP366-N3A VARIANT PEPTIDE FROM INFLUENZA VIRUS; COMPND 12 CHAIN: C; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: H2-D1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 13 ORGANISM_COMMON: MOUSE; SOURCE 14 ORGANISM_TAXID: 10090; SOURCE 15 GENE: B2M; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET; SOURCE 21 MOL_ID: 3; SOURCE 22 SYNTHETIC: YES KEYWDS H2DB, MOUSE MHC, INFLUENZA, IMMUNOLOGY, GLYCOPROTEIN, IMMUNE KEYWDS 2 RESPONSE, MEMBRANE, MHC I, TRANSMEMBRANE, IMMUNOGLOBULIN DOMAIN, KEYWDS 3 SECRETED, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR S.GRAS,C.GUILLONNEAU,J.ROSSJOHN REVDAT 4 06-SEP-23 3FTG 1 SEQADV REVDAT 3 29-FEB-12 3FTG 1 JRNL REVDAT 2 13-JUL-11 3FTG 1 VERSN REVDAT 1 29-DEC-09 3FTG 0 JRNL AUTH S.A.VALKENBURG,S.GRAS,C.GUILLONNEAU,N.L.LA GRUTA,P.G.THOMAS, JRNL AUTH 2 A.W.PURCELL,J.ROSSJOHN,P.C.DOHERTY,S.J.TURNER,K.KEDZIERSKA JRNL TITL PROTECTIVE EFFICACY OF CROSS-REACTIVE CD8+ T CELLS JRNL TITL 2 RECOGNISING MUTANT VIRAL EPITOPES DEPENDS ON PEPTIDE-MHC-I JRNL TITL 3 STRUCTURAL INTERACTIONS AND T CELL ACTIVATION THRESHOLD. JRNL REF PLOS PATHOG. V. 6 01039 2010 JRNL REFN ISSN 1553-7366 JRNL PMID 20711359 JRNL DOI 10.1371/JOURNAL.PPAT.1001039 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 18178 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.304 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1857 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1130 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.23 REMARK 3 BIN R VALUE (WORKING SET) : 0.2750 REMARK 3 BIN FREE R VALUE SET COUNT : 132 REMARK 3 BIN FREE R VALUE : 0.3350 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2936 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 46 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 47.68 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.45000 REMARK 3 B22 (A**2) : -0.17000 REMARK 3 B33 (A**2) : 0.62000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.526 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.358 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.248 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 22.366 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.920 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.839 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3138 ; 0.012 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4268 ; 1.468 ; 1.933 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 372 ; 7.048 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 168 ;38.413 ;23.333 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 525 ;20.701 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;19.500 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 422 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2497 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1412 ; 0.232 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2065 ; 0.308 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 146 ; 0.190 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 25 ; 0.231 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 2 ; 0.225 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1892 ; 0.686 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2980 ; 1.216 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1467 ; 1.346 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1288 ; 2.037 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 180 REMARK 3 RESIDUE RANGE : A 181 A 275 REMARK 3 RESIDUE RANGE : B 1 B 99 REMARK 3 ORIGIN FOR THE GROUP (A): -25.9475 2.5776 21.4264 REMARK 3 T TENSOR REMARK 3 T11: 0.0057 T22: -0.0135 REMARK 3 T33: -0.0667 T12: -0.0280 REMARK 3 T13: 0.0076 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: 0.4670 L22: 0.5904 REMARK 3 L33: 0.4579 L12: -0.3306 REMARK 3 L13: 0.0957 L23: 0.1539 REMARK 3 S TENSOR REMARK 3 S11: 0.0244 S12: -0.0483 S13: 0.0004 REMARK 3 S21: -0.0703 S22: -0.0058 S23: 0.0479 REMARK 3 S31: -0.0227 S32: -0.0397 S33: -0.0186 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3FTG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JAN-09. REMARK 100 THE DEPOSITION ID IS D_1000051021. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-AUG-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18264 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 7.220 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.5500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.93 REMARK 200 R MERGE FOR SHELL (I) : 0.30300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3CPL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M LITHIUM SULFATE, 28% PEG 3350, REMARK 280 0.1M SODIUM CITRATE, PH 5.6, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 46.82000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 47.49000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 66.12000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 46.82000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 47.49000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 66.12000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 46.82000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 47.49000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 66.12000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 46.82000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 47.49000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 66.12000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 HIS A 191 REMARK 465 HIS A 192 REMARK 465 PRO A 193 REMARK 465 ARG A 194 REMARK 465 SER A 195 REMARK 465 LYS A 196 REMARK 465 GLY A 197 REMARK 465 GLU A 198 REMARK 465 VAL A 199 REMARK 465 THR A 200 REMARK 465 LEU A 201 REMARK 465 ASN A 220 REMARK 465 GLY A 221 REMARK 465 GLU A 222 REMARK 465 GLU A 223 REMARK 465 LEU A 224 REMARK 465 THR A 225 REMARK 465 GLN A 226 REMARK 465 ASP A 227 REMARK 465 MET A 228 REMARK 465 VAL A 247 REMARK 465 VAL A 248 REMARK 465 VAL A 249 REMARK 465 PRO A 250 REMARK 465 LEU A 251 REMARK 465 GLY A 252 REMARK 465 LYS A 253 REMARK 465 GLU A 254 REMARK 465 PRO A 276 REMARK 465 PRO A 277 REMARK 465 PRO A 278 REMARK 465 SER A 279 REMARK 465 THR A 280 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 29 47.51 26.71 REMARK 500 ALA A 40 126.81 -18.06 REMARK 500 GLU A 41 -93.94 12.15 REMARK 500 PRO A 57 106.35 -34.94 REMARK 500 GLU A 58 -49.56 147.07 REMARK 500 ARG A 111 149.68 -172.46 REMARK 500 LEU A 130 25.01 46.85 REMARK 500 LYS A 131 -11.35 -143.38 REMARK 500 GLN A 149 46.48 -69.38 REMARK 500 SER A 150 -0.43 -165.31 REMARK 500 LEU A 179 -91.18 -125.98 REMARK 500 PRO A 267 31.55 -78.80 REMARK 500 GLU A 268 121.09 141.76 REMARK 500 PRO A 269 150.99 -47.53 REMARK 500 ARG A 273 -70.67 -149.52 REMARK 500 TRP A 274 -155.94 52.47 REMARK 500 LYS B 45 104.96 -47.37 REMARK 500 LYS B 48 80.51 65.36 REMARK 500 SER B 52 -95.32 -105.27 REMARK 500 ASP B 53 -86.79 -58.52 REMARK 500 ASP B 53 -91.90 -58.52 REMARK 500 MET B 54 76.03 51.24 REMARK 500 SER B 55 -166.18 -117.51 REMARK 500 TRP B 60 -12.60 83.80 REMARK 500 ASP B 85 -30.07 -36.66 REMARK 500 MET C 6 -85.08 -116.70 REMARK 500 REMARK 500 REMARK: NULL DBREF 3FTG A 1 280 UNP P01899 HA11_MOUSE 25 304 DBREF 3FTG B 1 99 UNP P01887 B2MG_MOUSE 21 119 DBREF 3FTG C 1 9 PDB 3FTG 3FTG 1 9 SEQADV 3FTG MET A 0 UNP P01899 INITIATING METHIONINE SEQADV 3FTG MET B 0 UNP P01887 INITIATING METHIONINE SEQRES 1 A 281 MET GLY PRO HIS SER MET ARG TYR PHE GLU THR ALA VAL SEQRES 2 A 281 SER ARG PRO GLY LEU GLU GLU PRO ARG TYR ILE SER VAL SEQRES 3 A 281 GLY TYR VAL ASP ASN LYS GLU PHE VAL ARG PHE ASP SER SEQRES 4 A 281 ASP ALA GLU ASN PRO ARG TYR GLU PRO ARG ALA PRO TRP SEQRES 5 A 281 MET GLU GLN GLU GLY PRO GLU TYR TRP GLU ARG GLU THR SEQRES 6 A 281 GLN LYS ALA LYS GLY GLN GLU GLN TRP PHE ARG VAL SER SEQRES 7 A 281 LEU ARG ASN LEU LEU GLY TYR TYR ASN GLN SER ALA GLY SEQRES 8 A 281 GLY SER HIS THR LEU GLN GLN MET SER GLY CYS ASP LEU SEQRES 9 A 281 GLY SER ASP TRP ARG LEU LEU ARG GLY TYR LEU GLN PHE SEQRES 10 A 281 ALA TYR GLU GLY ARG ASP TYR ILE ALA LEU ASN GLU ASP SEQRES 11 A 281 LEU LYS THR TRP THR ALA ALA ASP MET ALA ALA GLN ILE SEQRES 12 A 281 THR ARG ARG LYS TRP GLU GLN SER GLY ALA ALA GLU HIS SEQRES 13 A 281 TYR LYS ALA TYR LEU GLU GLY GLU CYS VAL GLU TRP LEU SEQRES 14 A 281 HIS ARG TYR LEU LYS ASN GLY ASN ALA THR LEU LEU ARG SEQRES 15 A 281 THR ASP SER PRO LYS ALA HIS VAL THR HIS HIS PRO ARG SEQRES 16 A 281 SER LYS GLY GLU VAL THR LEU ARG CYS TRP ALA LEU GLY SEQRES 17 A 281 PHE TYR PRO ALA ASP ILE THR LEU THR TRP GLN LEU ASN SEQRES 18 A 281 GLY GLU GLU LEU THR GLN ASP MET GLU LEU VAL GLU THR SEQRES 19 A 281 ARG PRO ALA GLY ASP GLY THR PHE GLN LYS TRP ALA SER SEQRES 20 A 281 VAL VAL VAL PRO LEU GLY LYS GLU GLN ASN TYR THR CYS SEQRES 21 A 281 ARG VAL TYR HIS GLU GLY LEU PRO GLU PRO LEU THR LEU SEQRES 22 A 281 ARG TRP GLU PRO PRO PRO SER THR SEQRES 1 B 100 MET ILE GLN LYS THR PRO GLN ILE GLN VAL TYR SER ARG SEQRES 2 B 100 HIS PRO PRO GLU ASN GLY LYS PRO ASN ILE LEU ASN CYS SEQRES 3 B 100 TYR VAL THR GLN PHE HIS PRO PRO HIS ILE GLU ILE GLN SEQRES 4 B 100 MET LEU LYS ASN GLY LYS LYS ILE PRO LYS VAL GLU MET SEQRES 5 B 100 SER ASP MET SER PHE SER LYS ASP TRP SER PHE TYR ILE SEQRES 6 B 100 LEU ALA HIS THR GLU PHE THR PRO THR GLU THR ASP THR SEQRES 7 B 100 TYR ALA CYS ARG VAL LYS HIS ASP SER MET ALA GLU PRO SEQRES 8 B 100 LYS THR VAL TYR TRP ASP ARG ASP MET SEQRES 1 C 9 ALA SER ALA GLU ASN MET GLU THR MET FORMUL 4 HOH *46(H2 O) HELIX 1 1 ALA A 49 GLU A 55 5 7 HELIX 2 2 GLU A 58 TYR A 85 1 28 HELIX 3 3 ASP A 137 GLN A 149 1 13 HELIX 4 4 GLY A 151 GLY A 162 1 12 HELIX 5 5 GLY A 162 GLY A 175 1 14 HELIX 6 6 ASN A 176 LEU A 179 5 4 SHEET 1 A 8 GLU A 46 PRO A 47 0 SHEET 2 A 8 LYS A 31 ASP A 37 -1 N ARG A 35 O GLU A 46 SHEET 3 A 8 ARG A 21 VAL A 28 -1 N VAL A 28 O LYS A 31 SHEET 4 A 8 HIS A 3 VAL A 12 -1 N THR A 10 O ILE A 23 SHEET 5 A 8 THR A 94 LEU A 103 -1 O LEU A 103 N HIS A 3 SHEET 6 A 8 LEU A 109 TYR A 118 -1 O LEU A 110 N ASP A 102 SHEET 7 A 8 ARG A 121 LEU A 126 -1 O TYR A 123 N PHE A 116 SHEET 8 A 8 TRP A 133 ALA A 135 -1 O THR A 134 N ALA A 125 SHEET 1 B 4 LYS A 186 HIS A 188 0 SHEET 2 B 4 CYS A 203 PHE A 208 -1 O LEU A 206 N LYS A 186 SHEET 3 B 4 PHE A 241 ALA A 245 -1 O ALA A 245 N CYS A 203 SHEET 4 B 4 ARG A 234 PRO A 235 -1 N ARG A 234 O GLN A 242 SHEET 1 C 3 ILE A 213 GLN A 218 0 SHEET 2 C 3 THR A 258 HIS A 263 -1 O TYR A 262 N THR A 214 SHEET 3 C 3 LEU A 270 LEU A 272 -1 O LEU A 272 N CYS A 259 SHEET 1 D 4 GLN B 6 SER B 11 0 SHEET 2 D 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 D 4 PHE B 62 PHE B 70 -1 O PHE B 70 N ASN B 21 SHEET 4 D 4 GLU B 50 MET B 51 -1 N GLU B 50 O HIS B 67 SHEET 1 E 4 GLN B 6 SER B 11 0 SHEET 2 E 4 ASN B 21 PHE B 30 -1 O ASN B 24 N TYR B 10 SHEET 3 E 4 PHE B 62 PHE B 70 -1 O PHE B 70 N ASN B 21 SHEET 4 E 4 SER B 55 PHE B 56 -1 N SER B 55 O TYR B 63 SHEET 1 F 4 LYS B 44 LYS B 45 0 SHEET 2 F 4 GLU B 36 LYS B 41 -1 N LYS B 41 O LYS B 44 SHEET 3 F 4 TYR B 78 LYS B 83 -1 O ARG B 81 N GLN B 38 SHEET 4 F 4 LYS B 91 TYR B 94 -1 O LYS B 91 N VAL B 82 SSBOND 1 CYS A 101 CYS A 164 1555 1555 2.05 SSBOND 2 CYS A 203 CYS A 259 1555 1555 2.04 SSBOND 3 CYS B 25 CYS B 80 1555 1555 2.04 CISPEP 1 TYR A 209 PRO A 210 0 -0.08 CISPEP 2 HIS B 31 PRO B 32 0 0.38 CRYST1 93.640 94.980 132.240 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010679 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010529 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007562 0.00000