HEADER OXIDOREDUCTASE 14-JAN-09 3FU9 TITLE MELANOCARPUS ALBOMYCES LACCASE CRYSTAL SOAKED (20 MIN) WITH 2,6- TITLE 2 DIMETHOXYPHENOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: LACCASE-1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BENZENEDIOL:OXYGEN OXIDOREDUCTASE 1, URISHIOL OXIDASE 1, COMPND 5 DIPHENOL OXIDASE 1, LIGNINOLYTIC PHENOLOXIDASE; COMPND 6 EC: 1.10.3.2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MELANOCARPUS ALBOMYCES; SOURCE 3 ORGANISM_TAXID: 204285; SOURCE 4 STRAIN: VTT D-96490; SOURCE 5 GENE: LAC1; SOURCE 6 EXPRESSION_SYSTEM: TRICHODERMA REESEI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 51453; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: RUTC-30 KEYWDS LACCASE, MULTICOPPER OXIDASE, COMPLEX STRUCTURE, 2, 6- KEYWDS 2 DIMETHOXYPHENOL, OXIDATION OF PHENOLIC COMPOUNDS, GLYCOPROTEIN, KEYWDS 3 LIGNIN DEGRADATION, METAL-BINDING, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR J.P.KALLIO,N.HAKULINEN,J.ROUVINEN REVDAT 4 29-JUL-20 3FU9 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 14-JAN-15 3FU9 1 LINK REMARK REVDAT 2 13-JUL-11 3FU9 1 VERSN REVDAT 1 22-SEP-09 3FU9 0 JRNL AUTH J.P.KALLIO,S.AUER,J.JANIS,M.ANDBERG,K.KRUUS,J.ROUVINEN, JRNL AUTH 2 A.KOIVULA,N.HAKULINEN JRNL TITL STRUCTURE-FUNCTION STUDIES OF A MELANOCARPUS ALBOMYCES JRNL TITL 2 LACCASE SUGGEST A PATHWAY FOR OXIDATION OF PHENOLIC JRNL TITL 3 COMPOUNDS. JRNL REF J.MOL.BIOL. V. 392 895 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19563811 JRNL DOI 10.1016/J.JMB.2009.06.053 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.61 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 73996 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.235 REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.330 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3895 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5278 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2770 REMARK 3 BIN FREE R VALUE SET COUNT : 278 REMARK 3 BIN FREE R VALUE : 0.3860 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8738 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 254 REMARK 3 SOLVENT ATOMS : 700 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.94000 REMARK 3 B22 (A**2) : -1.97000 REMARK 3 B33 (A**2) : 3.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.44000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.246 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.243 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.216 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.795 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.891 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.762 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 9274 ; 0.030 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 12757 ; 2.719 ; 1.958 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1116 ; 8.839 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 446 ;37.037 ;24.350 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1246 ;18.188 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 50 ;19.300 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1406 ; 0.172 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7304 ; 0.013 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 5654 ; 0.303 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 6064 ; 0.335 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 957 ; 0.275 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 9 ; 0.132 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 59 ; 0.279 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 14 ; 0.255 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5786 ; 1.379 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 9110 ; 1.975 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4106 ; 3.316 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3647 ; 4.233 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3FU9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-JAN-09. REMARK 100 THE DEPOSITION ID IS D_1000051049. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X12 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI[111], REMARK 200 HORIZONTALLY FOCUSSING REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 77891 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09400 REMARK 200 FOR THE DATA SET : 7.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.27300 REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15 % PMME 2000, 0,2 M AMMONIUM REMARK 280 SULPHATE, 0,1 M SODIUM ACETATE, PH 4.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 87.06000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.11500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 87.06000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.11500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CG2 THR B 261 O HOH B 812 1.95 REMARK 500 CG2 THR B 134 O HOH B 636 1.96 REMARK 500 ND1 HIS B 140 O HOH B 623 1.96 REMARK 500 CB SER A 510 O HOH A 626 1.96 REMARK 500 O HOH A 639 O HOH A 674 1.96 REMARK 500 CB CYS A 12 O HOH A 628 1.97 REMARK 500 CE1 HIS B 140 O HOH B 623 1.99 REMARK 500 O HOH A 639 O HOH A 759 2.01 REMARK 500 O HOH B 681 O HOH B 721 2.01 REMARK 500 O HOH B 716 O HOH B 733 2.01 REMARK 500 O PHE B 170 O HOH B 643 2.01 REMARK 500 O HOH B 780 O HOH B 841 2.03 REMARK 500 O ASN B 303 O HOH B 664 2.03 REMARK 500 O HOH B 853 O HOH B 910 2.03 REMARK 500 O HOH B 777 O HOH B 915 2.04 REMARK 500 O HOH B 622 O HOH B 745 2.04 REMARK 500 O HOH B 744 O HOH B 755 2.04 REMARK 500 OE1 GLU B 113 O HOH B 858 2.06 REMARK 500 O HOH B 813 O HOH B 840 2.06 REMARK 500 OG SER B 142 OD1 ASP B 556 2.06 REMARK 500 NE2 HIS A 438 OE1 GLU A 519 2.06 REMARK 500 OE1 GLU A 42 O HOH A 615 2.08 REMARK 500 OG SER A 510 O HOH A 626 2.09 REMARK 500 O HOH B 739 O HOH B 925 2.09 REMARK 500 O THR A 479 O HOH A 895 2.09 REMARK 500 O HOH A 714 O HOH A 767 2.10 REMARK 500 OD1 ASN B 381 NZ LYS B 554 2.10 REMARK 500 O HOH B 672 O HOH B 795 2.11 REMARK 500 O TYR A 23 O HOH A 620 2.11 REMARK 500 SG CYS A 4 O HOH A 628 2.11 REMARK 500 ND2 ASN A 39 O5 NAG A 700 2.11 REMARK 500 O HIS B 436 O HOH B 717 2.12 REMARK 500 O HOH A 784 O HOH A 842 2.12 REMARK 500 ND2 ASN A 189 O HOH A 632 2.13 REMARK 500 OD1 ASP B 196 O HOH B 658 2.13 REMARK 500 ND2 ASN A 201 O HOH A 768 2.13 REMARK 500 O HOH A 836 O HOH B 645 2.13 REMARK 500 OE2 GLU B 420 O HOH B 633 2.15 REMARK 500 ND2 ASN B 289 O5 NAG F 1 2.15 REMARK 500 OD1 ASN A 68 O HOH A 907 2.15 REMARK 500 OH TYR B 552 O HOH B 692 2.15 REMARK 500 OH TYR A 286 O HOH A 811 2.16 REMARK 500 O HOH B 645 O HOH B 885 2.16 REMARK 500 ND2 ASN B 201 C2 NAG B 760 2.17 REMARK 500 NH2 ARG B 520 OD2 ASP B 523 2.17 REMARK 500 O HOH B 605 O HOH B 658 2.17 REMARK 500 O HOH A 625 O HOH A 686 2.17 REMARK 500 CE1 PHE B 440 O HOH B 668 2.17 REMARK 500 OG1 THR B 209 OE2 GLU B 211 2.17 REMARK 500 N HIS B 438 O HOH B 717 2.18 REMARK 500 REMARK 500 THIS ENTRY HAS 57 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU B 78 O7 NAG A 700 3545 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 1 CG GLU A 1 CD 0.095 REMARK 500 TYR A 145 CD1 TYR A 145 CE1 0.091 REMARK 500 VAL A 150 CB VAL A 150 CG2 0.150 REMARK 500 GLN A 154 C GLN A 154 O -0.136 REMARK 500 SER A 233 CB SER A 233 OG 0.088 REMARK 500 VAL A 255 CB VAL A 255 CG2 0.175 REMARK 500 VAL A 257 CB VAL A 257 CG1 0.129 REMARK 500 TYR A 286 CD1 TYR A 286 CE1 0.105 REMARK 500 TYR A 286 CE2 TYR A 286 CD2 0.175 REMARK 500 ASP A 356 CB ASP A 356 CG 0.127 REMARK 500 VAL A 361 CA VAL A 361 CB 0.135 REMARK 500 CYS A 503 CB CYS A 503 SG -0.131 REMARK 500 GLU A 531 CG GLU A 531 CD 0.130 REMARK 500 GLU B 113 CG GLU B 113 CD 0.095 REMARK 500 VAL B 257 CB VAL B 257 CG1 0.137 REMARK 500 TYR B 286 CD1 TYR B 286 CE1 0.146 REMARK 500 TYR B 286 CE2 TYR B 286 CD2 0.131 REMARK 500 GLU B 519 CG GLU B 519 CD 0.091 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 40 CA - CB - CG ANGL. DEV. = 23.6 DEGREES REMARK 500 PRO A 67 C - N - CA ANGL. DEV. = 13.9 DEGREES REMARK 500 ASP A 75 CB - CG - OD2 ANGL. DEV. = -6.7 DEGREES REMARK 500 ASP A 101 CB - CG - OD1 ANGL. DEV. = -6.2 DEGREES REMARK 500 LEU A 161 CB - CG - CD1 ANGL. DEV. = 10.6 DEGREES REMARK 500 ARG A 467 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG A 527 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 LYS A 554 CD - CE - NZ ANGL. DEV. = -19.9 DEGREES REMARK 500 ARG B 10 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ASP B 50 CB - CG - OD1 ANGL. DEV. = -6.0 DEGREES REMARK 500 ASP B 50 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 ARG B 130 NE - CZ - NH1 ANGL. DEV. = 4.7 DEGREES REMARK 500 ARG B 130 NE - CZ - NH2 ANGL. DEV. = -5.2 DEGREES REMARK 500 PRO B 283 C - N - CA ANGL. DEV. = 13.6 DEGREES REMARK 500 LEU B 302 CB - CG - CD1 ANGL. DEV. = -10.9 DEGREES REMARK 500 SER B 350 N - CA - C ANGL. DEV. = 18.9 DEGREES REMARK 500 PRO B 387 C - N - CA ANGL. DEV. = 12.8 DEGREES REMARK 500 ASP B 439 CB - CG - OD1 ANGL. DEV. = 6.8 DEGREES REMARK 500 PRO B 447 C - N - CA ANGL. DEV. = -14.8 DEGREES REMARK 500 PRO B 447 C - N - CD ANGL. DEV. = 13.4 DEGREES REMARK 500 ARG B 467 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG B 467 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 LEU B 489 CA - CB - CG ANGL. DEV. = 17.9 DEGREES REMARK 500 LEU B 500 CA - CB - CG ANGL. DEV. = 15.1 DEGREES REMARK 500 ARG B 520 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG B 520 NE - CZ - NH2 ANGL. DEV. = -4.3 DEGREES REMARK 500 ASP B 532 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 4 0.17 -150.57 REMARK 500 TRP A 13 -63.94 -134.56 REMARK 500 SER A 91 111.75 164.95 REMARK 500 LYS A 100 103.10 -48.17 REMARK 500 THR A 102 30.24 -144.11 REMARK 500 ASN A 103 -35.61 -37.61 REMARK 500 VAL A 111 -60.42 -122.18 REMARK 500 SER A 135 -153.97 -146.19 REMARK 500 SER A 142 -126.41 44.10 REMARK 500 VAL A 149 81.11 -67.16 REMARK 500 ASN A 201 54.10 32.82 REMARK 500 PRO A 207 8.25 -65.83 REMARK 500 GLU A 235 -37.89 -151.44 REMARK 500 ASN A 244 13.58 85.43 REMARK 500 ASP A 253 -138.85 52.65 REMARK 500 MET A 254 49.72 -107.79 REMARK 500 ALA A 268 -172.79 -61.19 REMARK 500 ASP A 284 -179.07 175.44 REMARK 500 THR A 291 -169.76 -123.99 REMARK 500 GLN A 295 59.85 26.78 REMARK 500 ALA A 296 18.91 52.85 REMARK 500 PRO A 316 -172.58 -65.48 REMARK 500 ASP A 329 107.79 -49.45 REMARK 500 ASN A 349 -94.33 -99.66 REMARK 500 SER A 350 1.67 -14.69 REMARK 500 ASN A 381 82.28 -163.64 REMARK 500 LYS A 386 55.83 -174.53 REMARK 500 ASP A 412 19.96 49.94 REMARK 500 ASN A 421 64.37 -101.91 REMARK 500 PRO A 432 90.89 -69.18 REMARK 500 HIS A 438 149.56 -172.24 REMARK 500 GLN A 454 -6.65 69.37 REMARK 500 ASN A 472 54.70 30.28 REMARK 500 ARG A 476 -166.05 -176.47 REMARK 500 THR A 493 68.05 -61.53 REMARK 500 ASN A 495 89.52 -164.79 REMARK 500 LEU A 513 68.58 -66.38 REMARK 500 PHE A 517 92.25 -64.66 REMARK 500 LEU A 518 87.38 -64.98 REMARK 500 PRO A 551 5.12 -66.98 REMARK 500 CYS B 4 23.37 -142.65 REMARK 500 TRP B 13 -56.98 -136.39 REMARK 500 ASP B 15 94.28 -41.49 REMARK 500 LYS B 100 98.89 -39.10 REMARK 500 LEU B 104 0.58 -67.38 REMARK 500 GLU B 113 156.53 175.47 REMARK 500 LYS B 119 61.20 61.23 REMARK 500 ARG B 130 33.60 -96.62 REMARK 500 SER B 135 -146.39 -154.39 REMARK 500 SER B 142 -120.06 43.91 REMARK 500 REMARK 500 THIS ENTRY HAS 73 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 437 HIS A 438 -149.03 REMARK 500 SER B 514 VAL B 515 145.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 604 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 93 NE2 REMARK 620 2 HIS A 434 NE2 160.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 603 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 95 ND1 REMARK 620 2 HIS A 138 NE2 103.5 REMARK 620 3 HIS A 504 NE2 109.1 120.4 REMARK 620 4 HOH A 568 O 141.3 101.5 82.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 602 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 140 NE2 REMARK 620 2 HIS A 436 NE2 134.0 REMARK 620 3 HIS A 502 NE2 109.6 116.4 REMARK 620 4 HOH A 568 O 67.9 106.7 96.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 601 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 431 ND1 REMARK 620 2 CYS A 503 SG 139.0 REMARK 620 3 HIS A 508 ND1 94.0 126.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 604 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 93 NE2 REMARK 620 2 HIS B 434 NE2 175.1 REMARK 620 3 HIS B 436 NE2 73.7 103.4 REMARK 620 4 CL B 610 CL 91.7 93.2 121.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 603 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 95 ND1 REMARK 620 2 HIS B 138 NE2 138.9 REMARK 620 3 HIS B 504 NE2 100.9 117.7 REMARK 620 4 HOH B 617 O 125.9 77.1 79.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 602 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 140 NE2 REMARK 620 2 HIS B 436 NE2 104.4 REMARK 620 3 HIS B 502 NE2 127.7 123.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 601 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 431 ND1 REMARK 620 2 CYS B 503 SG 133.8 REMARK 620 3 HIS B 508 ND1 108.9 117.0 REMARK 620 N 1 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2Q9O RELATED DB: PDB REMARK 900 NATIVE RMAL STRUCTURE REMARK 900 RELATED ID: 3FU7 RELATED DB: PDB REMARK 900 RELATED ID: 3FU8 RELATED DB: PDB DBREF 3FU9 A 1 559 UNP Q70KY3 LAC1_MELAO 51 609 DBREF 3FU9 B 1 559 UNP Q70KY3 LAC1_MELAO 51 609 SEQRES 1 A 559 GLU PRO THR CYS ASN THR PRO SER ASN ARG ALA CYS TRP SEQRES 2 A 559 SER ASP GLY PHE ASP ILE ASN THR ASP TYR GLU VAL SER SEQRES 3 A 559 THR PRO ASP THR GLY VAL THR GLN SER TYR VAL PHE ASN SEQRES 4 A 559 LEU THR GLU VAL ASP ASN TRP MET GLY PRO ASP GLY VAL SEQRES 5 A 559 VAL LYS GLU LYS VAL MET LEU ILE ASN GLY ASN ILE MET SEQRES 6 A 559 GLY PRO ASN ILE VAL ALA ASN TRP GLY ASP THR VAL GLU SEQRES 7 A 559 VAL THR VAL ILE ASN ASN LEU VAL THR ASN GLY THR SER SEQRES 8 A 559 ILE HIS TRP HIS GLY ILE HIS GLN LYS ASP THR ASN LEU SEQRES 9 A 559 HIS ASP GLY ALA ASN GLY VAL THR GLU CYS PRO ILE PRO SEQRES 10 A 559 PRO LYS GLY GLY GLN ARG THR TYR ARG TRP ARG ALA ARG SEQRES 11 A 559 GLN TYR GLY THR SER TRP TYR HIS SER HIS PHE SER ALA SEQRES 12 A 559 GLN TYR GLY ASN GLY VAL VAL GLY THR ILE GLN ILE ASN SEQRES 13 A 559 GLY PRO ALA SER LEU PRO TYR ASP ILE ASP LEU GLY VAL SEQRES 14 A 559 PHE PRO ILE THR ASP TYR TYR TYR ARG ALA ALA ASP ASP SEQRES 15 A 559 LEU VAL HIS PHE THR GLN ASN ASN ALA PRO PRO PHE SER SEQRES 16 A 559 ASP ASN VAL LEU ILE ASN GLY THR ALA VAL ASN PRO ASN SEQRES 17 A 559 THR GLY GLU GLY GLN TYR ALA ASN VAL THR LEU THR PRO SEQRES 18 A 559 GLY LYS ARG HIS ARG LEU ARG ILE LEU ASN THR SER THR SEQRES 19 A 559 GLU ASN HIS PHE GLN VAL SER LEU VAL ASN HIS THR MET SEQRES 20 A 559 THR VAL ILE ALA ALA ASP MET VAL PRO VAL ASN ALA MET SEQRES 21 A 559 THR VAL ASP SER LEU PHE LEU ALA VAL GLY GLN ARG TYR SEQRES 22 A 559 ASP VAL VAL ILE ASP ALA SER ARG ALA PRO ASP ASN TYR SEQRES 23 A 559 TRP PHE ASN VAL THR PHE GLY GLY GLN ALA ALA CYS GLY SEQRES 24 A 559 GLY SER LEU ASN PRO HIS PRO ALA ALA ILE PHE HIS TYR SEQRES 25 A 559 ALA GLY ALA PRO GLY GLY LEU PRO THR ASP GLU GLY THR SEQRES 26 A 559 PRO PRO VAL ASP HIS GLN CYS LEU ASP THR LEU ASP VAL SEQRES 27 A 559 ARG PRO VAL VAL PRO ARG SER VAL PRO VAL ASN SER PHE SEQRES 28 A 559 VAL LYS ARG PRO ASP ASN THR LEU PRO VAL ALA LEU ASP SEQRES 29 A 559 LEU THR GLY THR PRO LEU PHE VAL TRP LYS VAL ASN GLY SEQRES 30 A 559 SER ASP ILE ASN VAL ASP TRP GLY LYS PRO ILE ILE ASP SEQRES 31 A 559 TYR ILE LEU THR GLY ASN THR SER TYR PRO VAL SER ASP SEQRES 32 A 559 ASN ILE VAL GLN VAL ASP ALA VAL ASP GLN TRP THR TYR SEQRES 33 A 559 TRP LEU ILE GLU ASN ASP PRO GLU GLY PRO PHE SER LEU SEQRES 34 A 559 PRO HIS PRO MET HIS LEU HIS GLY HIS ASP PHE LEU VAL SEQRES 35 A 559 LEU GLY ARG SER PRO ASP VAL PRO ALA ALA SER GLN GLN SEQRES 36 A 559 ARG PHE VAL PHE ASP PRO ALA VAL ASP LEU ALA ARG LEU SEQRES 37 A 559 ASN GLY ASP ASN PRO PRO ARG ARG ASP THR THR MET LEU SEQRES 38 A 559 PRO ALA GLY GLY TRP LEU LEU LEU ALA PHE ARG THR ASP SEQRES 39 A 559 ASN PRO GLY ALA TRP LEU PHE HIS CYS HIS ILE ALA TRP SEQRES 40 A 559 HIS VAL SER GLY GLY LEU SER VAL ASP PHE LEU GLU ARG SEQRES 41 A 559 PRO ALA ASP LEU ARG GLN ARG ILE SER GLN GLU ASP GLU SEQRES 42 A 559 ASP ASP PHE ASN ARG VAL CYS ASP GLU TRP ARG ALA TYR SEQRES 43 A 559 TRP PRO THR ASN PRO TYR PRO LYS ILE ASP SER GLY LEU SEQRES 1 B 559 GLU PRO THR CYS ASN THR PRO SER ASN ARG ALA CYS TRP SEQRES 2 B 559 SER ASP GLY PHE ASP ILE ASN THR ASP TYR GLU VAL SER SEQRES 3 B 559 THR PRO ASP THR GLY VAL THR GLN SER TYR VAL PHE ASN SEQRES 4 B 559 LEU THR GLU VAL ASP ASN TRP MET GLY PRO ASP GLY VAL SEQRES 5 B 559 VAL LYS GLU LYS VAL MET LEU ILE ASN GLY ASN ILE MET SEQRES 6 B 559 GLY PRO ASN ILE VAL ALA ASN TRP GLY ASP THR VAL GLU SEQRES 7 B 559 VAL THR VAL ILE ASN ASN LEU VAL THR ASN GLY THR SER SEQRES 8 B 559 ILE HIS TRP HIS GLY ILE HIS GLN LYS ASP THR ASN LEU SEQRES 9 B 559 HIS ASP GLY ALA ASN GLY VAL THR GLU CYS PRO ILE PRO SEQRES 10 B 559 PRO LYS GLY GLY GLN ARG THR TYR ARG TRP ARG ALA ARG SEQRES 11 B 559 GLN TYR GLY THR SER TRP TYR HIS SER HIS PHE SER ALA SEQRES 12 B 559 GLN TYR GLY ASN GLY VAL VAL GLY THR ILE GLN ILE ASN SEQRES 13 B 559 GLY PRO ALA SER LEU PRO TYR ASP ILE ASP LEU GLY VAL SEQRES 14 B 559 PHE PRO ILE THR ASP TYR TYR TYR ARG ALA ALA ASP ASP SEQRES 15 B 559 LEU VAL HIS PHE THR GLN ASN ASN ALA PRO PRO PHE SER SEQRES 16 B 559 ASP ASN VAL LEU ILE ASN GLY THR ALA VAL ASN PRO ASN SEQRES 17 B 559 THR GLY GLU GLY GLN TYR ALA ASN VAL THR LEU THR PRO SEQRES 18 B 559 GLY LYS ARG HIS ARG LEU ARG ILE LEU ASN THR SER THR SEQRES 19 B 559 GLU ASN HIS PHE GLN VAL SER LEU VAL ASN HIS THR MET SEQRES 20 B 559 THR VAL ILE ALA ALA ASP MET VAL PRO VAL ASN ALA MET SEQRES 21 B 559 THR VAL ASP SER LEU PHE LEU ALA VAL GLY GLN ARG TYR SEQRES 22 B 559 ASP VAL VAL ILE ASP ALA SER ARG ALA PRO ASP ASN TYR SEQRES 23 B 559 TRP PHE ASN VAL THR PHE GLY GLY GLN ALA ALA CYS GLY SEQRES 24 B 559 GLY SER LEU ASN PRO HIS PRO ALA ALA ILE PHE HIS TYR SEQRES 25 B 559 ALA GLY ALA PRO GLY GLY LEU PRO THR ASP GLU GLY THR SEQRES 26 B 559 PRO PRO VAL ASP HIS GLN CYS LEU ASP THR LEU ASP VAL SEQRES 27 B 559 ARG PRO VAL VAL PRO ARG SER VAL PRO VAL ASN SER PHE SEQRES 28 B 559 VAL LYS ARG PRO ASP ASN THR LEU PRO VAL ALA LEU ASP SEQRES 29 B 559 LEU THR GLY THR PRO LEU PHE VAL TRP LYS VAL ASN GLY SEQRES 30 B 559 SER ASP ILE ASN VAL ASP TRP GLY LYS PRO ILE ILE ASP SEQRES 31 B 559 TYR ILE LEU THR GLY ASN THR SER TYR PRO VAL SER ASP SEQRES 32 B 559 ASN ILE VAL GLN VAL ASP ALA VAL ASP GLN TRP THR TYR SEQRES 33 B 559 TRP LEU ILE GLU ASN ASP PRO GLU GLY PRO PHE SER LEU SEQRES 34 B 559 PRO HIS PRO MET HIS LEU HIS GLY HIS ASP PHE LEU VAL SEQRES 35 B 559 LEU GLY ARG SER PRO ASP VAL PRO ALA ALA SER GLN GLN SEQRES 36 B 559 ARG PHE VAL PHE ASP PRO ALA VAL ASP LEU ALA ARG LEU SEQRES 37 B 559 ASN GLY ASP ASN PRO PRO ARG ARG ASP THR THR MET LEU SEQRES 38 B 559 PRO ALA GLY GLY TRP LEU LEU LEU ALA PHE ARG THR ASP SEQRES 39 B 559 ASN PRO GLY ALA TRP LEU PHE HIS CYS HIS ILE ALA TRP SEQRES 40 B 559 HIS VAL SER GLY GLY LEU SER VAL ASP PHE LEU GLU ARG SEQRES 41 B 559 PRO ALA ASP LEU ARG GLN ARG ILE SER GLN GLU ASP GLU SEQRES 42 B 559 ASP ASP PHE ASN ARG VAL CYS ASP GLU TRP ARG ALA TYR SEQRES 43 B 559 TRP PRO THR ASN PRO TYR PRO LYS ILE ASP SER GLY LEU MODRES 3FU9 ASN A 39 ASN GLYCOSYLATION SITE MODRES 3FU9 ASN A 88 ASN GLYCOSYLATION SITE MODRES 3FU9 ASN A 216 ASN GLYCOSYLATION SITE MODRES 3FU9 ASN A 289 ASN GLYCOSYLATION SITE MODRES 3FU9 ASN A 376 ASN GLYCOSYLATION SITE MODRES 3FU9 ASN B 39 ASN GLYCOSYLATION SITE MODRES 3FU9 ASN B 88 ASN GLYCOSYLATION SITE MODRES 3FU9 ASN B 201 ASN GLYCOSYLATION SITE MODRES 3FU9 ASN B 216 ASN GLYCOSYLATION SITE MODRES 3FU9 ASN B 289 ASN GLYCOSYLATION SITE MODRES 3FU9 ASN B 376 ASN GLYCOSYLATION SITE HET NAG C 1 14 HET NAG C 2 14 HET NAG D 1 14 HET NAG D 2 14 HET NAG E 1 14 HET NAG E 2 14 HET NAG F 1 14 HET NAG F 2 14 HET CU A 601 1 HET CU A 602 1 HET CU A 603 1 HET CU A 604 1 HET CL A 610 1 HET NAG A 700 14 HET NAG A 720 14 HET NAG A 740 14 HET SO4 A8002 5 HET KIB A1001 12 HET CU B 601 1 HET CU B 602 1 HET CU B 603 1 HET CU B 604 1 HET CL B 610 1 HET NAG B 700 14 HET NAG B 720 14 HET NAG B 740 14 HET NAG B 760 14 HET SO4 B8001 5 HET KIB B2001 12 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CU COPPER (II) ION HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION HETNAM KIB 2,6-DIMETHOXYBENZENE-1,4-DIOL FORMUL 3 NAG 15(C8 H15 N O6) FORMUL 7 CU 8(CU 2+) FORMUL 11 CL 2(CL 1-) FORMUL 15 SO4 2(O4 S 2-) FORMUL 16 KIB 2(C8 H10 O4) FORMUL 28 HOH *700(H2 O) HELIX 1 1 THR A 102 ASP A 106 5 5 HELIX 2 2 ALA A 143 GLY A 148 5 6 HELIX 3 3 ALA A 179 ASN A 190 1 12 HELIX 4 4 GLY A 293 ALA A 297 5 5 HELIX 5 5 PRO A 387 THR A 394 1 8 HELIX 6 6 ASP A 460 LEU A 465 1 6 HELIX 7 7 ILE A 505 GLY A 511 1 7 HELIX 8 8 ARG A 520 ILE A 528 1 9 HELIX 9 9 SER A 529 TRP A 547 1 19 HELIX 10 10 PRO A 548 ASN A 550 5 3 HELIX 11 11 THR B 102 ASP B 106 5 5 HELIX 12 12 ALA B 143 GLY B 148 5 6 HELIX 13 13 ALA B 179 GLN B 188 1 10 HELIX 14 14 GLY B 293 ALA B 297 5 5 HELIX 15 15 ARG B 354 ASP B 356 5 3 HELIX 16 16 PRO B 387 GLY B 395 1 9 HELIX 17 17 PRO B 400 ASN B 404 5 5 HELIX 18 18 ASP B 460 LEU B 465 1 6 HELIX 19 19 ALA B 466 LEU B 468 5 3 HELIX 20 20 ILE B 505 GLY B 512 1 8 HELIX 21 21 ARG B 520 GLN B 526 1 7 HELIX 22 22 SER B 529 TRP B 547 1 19 HELIX 23 23 PRO B 548 ASN B 550 5 3 SHEET 1 A 2 CYS A 12 SER A 14 0 SHEET 2 A 2 PHE A 17 ASP A 18 -1 O PHE A 17 N SER A 14 SHEET 1 B 4 VAL A 53 ILE A 60 0 SHEET 2 B 4 THR A 33 MET A 47 -1 N VAL A 43 O VAL A 57 SHEET 3 B 4 THR A 76 ASN A 84 1 O THR A 80 N PHE A 38 SHEET 4 B 4 GLN A 122 ARG A 128 -1 O ARG A 123 N VAL A 81 SHEET 1 C 4 ILE A 69 ASN A 72 0 SHEET 2 C 4 VAL A 150 ASN A 156 1 O ASN A 156 N ALA A 71 SHEET 3 C 4 GLY A 133 SER A 139 -1 N SER A 135 O ILE A 153 SHEET 4 C 4 ILE A 92 HIS A 95 -1 N HIS A 93 O HIS A 138 SHEET 1 D 6 ASN A 197 ILE A 200 0 SHEET 2 D 6 ILE A 165 TYR A 175 -1 N THR A 173 O LEU A 199 SHEET 3 D 6 ARG A 224 ASN A 231 1 O ARG A 228 N PHE A 170 SHEET 4 D 6 ARG A 272 ASP A 278 -1 O VAL A 275 N LEU A 227 SHEET 5 D 6 MET A 247 ALA A 252 -1 N THR A 248 O VAL A 276 SHEET 6 D 6 VAL A 255 VAL A 262 -1 O VAL A 262 N MET A 247 SHEET 1 E 5 ASN A 216 LEU A 219 0 SHEET 2 E 5 ALA A 307 TYR A 312 1 O HIS A 311 N VAL A 217 SHEET 3 E 5 ASN A 285 THR A 291 -1 N PHE A 288 O ALA A 308 SHEET 4 E 5 PHE A 238 LEU A 242 -1 N GLN A 239 O THR A 291 SHEET 5 E 5 LEU A 265 LEU A 267 -1 O LEU A 265 N VAL A 240 SHEET 1 F 6 VAL A 372 VAL A 375 0 SHEET 2 F 6 THR A 358 ASP A 364 -1 N ALA A 362 O LYS A 374 SHEET 3 F 6 TRP A 414 ASN A 421 1 O GLU A 420 N LEU A 359 SHEET 4 F 6 TRP A 486 ARG A 492 -1 O LEU A 489 N TRP A 417 SHEET 5 F 6 PHE A 440 ARG A 445 -1 N GLY A 444 O LEU A 488 SHEET 6 F 6 ARG A 475 ARG A 476 -1 O ARG A 476 N PHE A 440 SHEET 1 G 5 ILE A 405 VAL A 408 0 SHEET 2 G 5 SER A 514 GLU A 519 1 O ASP A 516 N VAL A 406 SHEET 3 G 5 GLY A 497 CYS A 503 -1 N PHE A 501 O VAL A 515 SHEET 4 G 5 HIS A 431 LEU A 435 -1 N HIS A 434 O HIS A 502 SHEET 5 G 5 THR A 478 LEU A 481 -1 O THR A 479 N MET A 433 SHEET 1 H 2 CYS B 12 SER B 14 0 SHEET 2 H 2 PHE B 17 ASP B 18 -1 O PHE B 17 N SER B 14 SHEET 1 I 4 VAL B 53 ILE B 60 0 SHEET 2 I 4 THR B 33 MET B 47 -1 N VAL B 43 O VAL B 57 SHEET 3 I 4 THR B 76 ASN B 84 1 O ILE B 82 N PHE B 38 SHEET 4 I 4 GLY B 121 ARG B 128 -1 O ARG B 123 N VAL B 81 SHEET 1 J 4 ILE B 69 ASN B 72 0 SHEET 2 J 4 VAL B 150 ASN B 156 1 O ASN B 156 N ALA B 71 SHEET 3 J 4 GLY B 133 SER B 139 -1 N TYR B 137 O GLY B 151 SHEET 4 J 4 ILE B 92 HIS B 95 -1 N HIS B 93 O HIS B 138 SHEET 1 K 6 ASN B 197 ILE B 200 0 SHEET 2 K 6 ILE B 165 TYR B 175 -1 N THR B 173 O LEU B 199 SHEET 3 K 6 ARG B 224 ASN B 231 1 O LEU B 230 N ILE B 172 SHEET 4 K 6 ARG B 272 ASP B 278 -1 O VAL B 275 N LEU B 227 SHEET 5 K 6 MET B 247 ALA B 252 -1 N THR B 248 O VAL B 276 SHEET 6 K 6 VAL B 255 VAL B 262 -1 O VAL B 255 N ALA B 252 SHEET 1 L 5 ASN B 216 LEU B 219 0 SHEET 2 L 5 ALA B 307 TYR B 312 1 O HIS B 311 N VAL B 217 SHEET 3 L 5 ASN B 285 THR B 291 -1 N PHE B 288 O ALA B 308 SHEET 4 L 5 PHE B 238 LEU B 242 -1 N GLN B 239 O THR B 291 SHEET 5 L 5 LEU B 265 LEU B 267 -1 O LEU B 267 N PHE B 238 SHEET 1 M 6 VAL B 372 VAL B 375 0 SHEET 2 M 6 THR B 358 ASP B 364 -1 N ASP B 364 O VAL B 372 SHEET 3 M 6 TRP B 414 ASN B 421 1 O GLU B 420 N LEU B 359 SHEET 4 M 6 TRP B 486 ARG B 492 -1 O LEU B 487 N ILE B 419 SHEET 5 M 6 PHE B 440 ARG B 445 -1 N GLY B 444 O LEU B 488 SHEET 6 M 6 ARG B 475 ARG B 476 -1 O ARG B 476 N PHE B 440 SHEET 1 N 4 THR B 478 LEU B 481 0 SHEET 2 N 4 HIS B 431 LEU B 435 -1 N MET B 433 O THR B 479 SHEET 3 N 4 GLY B 497 CYS B 503 -1 O HIS B 502 N HIS B 434 SHEET 4 N 4 SER B 514 GLU B 519 -1 O GLU B 519 N GLY B 497 SSBOND 1 CYS A 114 CYS A 540 1555 1555 2.05 SSBOND 2 CYS A 298 CYS A 332 1555 1555 2.04 SSBOND 3 CYS B 4 CYS B 12 1555 1555 2.97 SSBOND 4 CYS B 114 CYS B 540 1555 1555 2.07 SSBOND 5 CYS B 298 CYS B 332 1555 1555 2.01 LINK ND2 ASN A 39 C1 NAG A 700 1555 1555 1.41 LINK ND2 ASN A 88 C1 NAG C 1 1555 1555 1.48 LINK ND2 ASN A 216 C1 NAG A 720 1555 1555 1.43 LINK ND2 ASN A 289 C1 NAG D 1 1555 1555 1.38 LINK ND2 ASN A 289 C2 NAG D 1 1555 1555 1.39 LINK ND2 ASN A 376 C1 NAG A 740 1555 1555 1.44 LINK ND2 ASN B 39 C1 NAG B 700 1555 1555 1.45 LINK ND2 ASN B 88 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN B 201 C1 NAG B 760 1555 1555 1.43 LINK ND2 ASN B 216 C1 NAG B 720 1555 1555 1.48 LINK ND2 ASN B 289 C1 NAG F 1 1555 1555 1.41 LINK ND2 ASN B 376 C1 NAG B 740 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.46 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.40 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 LINK NE2 HIS A 93 CU CU A 604 1555 1555 1.90 LINK ND1 HIS A 95 CU CU A 603 1555 1555 2.33 LINK NE2 HIS A 138 CU CU A 603 1555 1555 2.03 LINK NE2 HIS A 140 CU CU A 602 1555 1555 1.88 LINK ND1 HIS A 431 CU CU A 601 1555 1555 1.81 LINK NE2 HIS A 434 CU CU A 604 1555 1555 2.03 LINK NE2 HIS A 436 CU CU A 602 1555 1555 1.91 LINK NE2 HIS A 502 CU CU A 602 1555 1555 2.13 LINK SG CYS A 503 CU CU A 601 1555 1555 2.13 LINK NE2 HIS A 504 CU CU A 603 1555 1555 2.10 LINK ND1 HIS A 508 CU CU A 601 1555 1555 2.37 LINK O HOH A 568 CU CU A 602 1555 1555 2.50 LINK O HOH A 568 CU CU A 603 1555 1555 2.38 LINK NE2 HIS B 93 CU CU B 604 1555 1555 2.06 LINK ND1 HIS B 95 CU CU B 603 1555 1555 2.16 LINK NE2 HIS B 138 CU CU B 603 1555 1555 1.92 LINK NE2 HIS B 140 CU CU B 602 1555 1555 2.12 LINK ND1 HIS B 431 CU CU B 601 1555 1555 2.06 LINK NE2 HIS B 434 CU CU B 604 1555 1555 1.88 LINK NE2 HIS B 436 CU CU B 602 1555 1555 2.23 LINK NE2 HIS B 436 CU CU B 604 1555 1555 2.69 LINK NE2 HIS B 502 CU CU B 602 1555 1555 2.00 LINK SG CYS B 503 CU CU B 601 1555 1555 2.01 LINK NE2 HIS B 504 CU CU B 603 1555 1555 1.90 LINK ND1 HIS B 508 CU CU B 601 1555 1555 2.28 LINK CU CU B 603 O HOH B 617 1555 1555 2.59 LINK CU CU B 604 CL CL B 610 1555 1555 2.75 CISPEP 1 THR A 368 PRO A 369 0 -7.42 CISPEP 2 THR B 368 PRO B 369 0 -2.90 CRYST1 174.120 60.230 117.130 90.00 98.36 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005743 0.000000 0.000844 0.00000 SCALE2 0.000000 0.016603 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008629 0.00000