data_3FUS # _entry.id 3FUS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3FUS RCSB RCSB051067 WWPDB D_1000051067 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2BF1 _pdbx_database_related.details ;The original unliganded Simian Immunodeficiency Virus gp120 core structure. THIS ENTRY 2B6P REFLECTS AN ALTERNATIVE MODELING OF X-RAY DATA R2BF1SF ; _pdbx_database_related.content_type re-refinement # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3FUS _pdbx_database_status.recvd_initial_deposition_date 2009-01-14 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chen, X.' 1 'Poon, B.' 2 'Wang, Q.' 3 'Ma, J.' 4 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Structural improvement of unliganded simian immunodeficiency virus gp120 core by normal-mode-based X-ray crystallographic refinement. ; 'Acta Crystallogr.,Sect.D' 65 339 347 2009 ABCRE6 DK 0907-4449 0766 ? 19307715 10.1107/S0907444909003539 original_data_1 'Determining the structure of an unliganded and fully glycosylated SIV gp120 envelope glycoprotein.' Structure 13 197 211 2005 STRUE6 UK 0969-2126 2005 ? 15698564 10.1016/j.str.2004.12.004 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chen, X.' 1 ? primary 'Lu, M.' 2 ? primary 'Poon, B.K.' 3 ? primary 'Wang, Q.' 4 ? primary 'Ma, J.' 5 ? original_data_1 'Chen, B.' 6 ? original_data_1 'Vogan, E.M.' 7 ? original_data_1 'Gong, H.' 8 ? original_data_1 'Skehel, J.J.' 9 ? original_data_1 'Wiley, D.C.' 10 ? original_data_1 'Harrison, S.C.' 11 ? # _cell.entry_id 3FUS _cell.length_a 108.048 _cell.length_b 108.048 _cell.length_c 117.701 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3FUS _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'EXTERIOR MEMBRANE GLYCOPROTEIN GP120' 36833.723 1 ? ? 'GP120 CORE, RESIDUES 66-109, 209-311, 342-502' ? 2 branched man ;beta-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose ; 894.823 1 ? ? ? ? 3 branched man ;alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose ; 1056.964 2 ? ? ? ? 4 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose' 570.542 1 ? ? ? ? 5 branched man ;alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose ; 732.682 1 ? ? ? ? 6 branched man ;beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose ; 732.682 1 ? ? ? ? 7 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 1 ? ? ? ? 8 branched man ;alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose ; 1056.964 1 ? ? ? ? 9 branched man ;beta-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-beta-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 1235.105 1 ? ? ? ? 10 branched man ;alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 1072.964 1 ? ? ? ? 11 branched man ;alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 748.682 1 ? ? ? ? 12 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 2 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;HMELALNVTESFDAWENTVTEQAIEDVWQLFETSIKPCVKLSPLCIGAGHCNTSIIQESCDKHYWDTIRFRYCAPPGYAL LRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTYIYWHGRDNRTIISLNKYYNLTMKCRGAGWCWFG GNWKDAIKEMKQTIVKHPRYTGTNNTDKINLTAPRGGDPEVTFMWTNCRGEFLYCKMNWFLNWVEDRDVTNQRPKERHRR NYVPCHIRQIINTWHKVGKNVYLPPREGDLTCNSTVTSLIANIDWTDGNQTNITMSAEVAELYRLELGDYKLVEIT ; _entity_poly.pdbx_seq_one_letter_code_can ;HMELALNVTESFDAWENTVTEQAIEDVWQLFETSIKPCVKLSPLCIGAGHCNTSIIQESCDKHYWDTIRFRYCAPPGYAL LRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTYIYWHGRDNRTIISLNKYYNLTMKCRGAGWCWFG GNWKDAIKEMKQTIVKHPRYTGTNNTDKINLTAPRGGDPEVTFMWTNCRGEFLYCKMNWFLNWVEDRDVTNQRPKERHRR NYVPCHIRQIINTWHKVGKNVYLPPREGDLTCNSTVTSLIANIDWTDGNQTNITMSAEVAELYRLELGDYKLVEIT ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 MET n 1 3 GLU n 1 4 LEU n 1 5 ALA n 1 6 LEU n 1 7 ASN n 1 8 VAL n 1 9 THR n 1 10 GLU n 1 11 SER n 1 12 PHE n 1 13 ASP n 1 14 ALA n 1 15 TRP n 1 16 GLU n 1 17 ASN n 1 18 THR n 1 19 VAL n 1 20 THR n 1 21 GLU n 1 22 GLN n 1 23 ALA n 1 24 ILE n 1 25 GLU n 1 26 ASP n 1 27 VAL n 1 28 TRP n 1 29 GLN n 1 30 LEU n 1 31 PHE n 1 32 GLU n 1 33 THR n 1 34 SER n 1 35 ILE n 1 36 LYS n 1 37 PRO n 1 38 CYS n 1 39 VAL n 1 40 LYS n 1 41 LEU n 1 42 SER n 1 43 PRO n 1 44 LEU n 1 45 CYS n 1 46 ILE n 1 47 GLY n 1 48 ALA n 1 49 GLY n 1 50 HIS n 1 51 CYS n 1 52 ASN n 1 53 THR n 1 54 SER n 1 55 ILE n 1 56 ILE n 1 57 GLN n 1 58 GLU n 1 59 SER n 1 60 CYS n 1 61 ASP n 1 62 LYS n 1 63 HIS n 1 64 TYR n 1 65 TRP n 1 66 ASP n 1 67 THR n 1 68 ILE n 1 69 ARG n 1 70 PHE n 1 71 ARG n 1 72 TYR n 1 73 CYS n 1 74 ALA n 1 75 PRO n 1 76 PRO n 1 77 GLY n 1 78 TYR n 1 79 ALA n 1 80 LEU n 1 81 LEU n 1 82 ARG n 1 83 CYS n 1 84 ASN n 1 85 ASP n 1 86 THR n 1 87 ASN n 1 88 TYR n 1 89 SER n 1 90 GLY n 1 91 PHE n 1 92 MET n 1 93 PRO n 1 94 LYS n 1 95 CYS n 1 96 SER n 1 97 LYS n 1 98 VAL n 1 99 VAL n 1 100 VAL n 1 101 SER n 1 102 SER n 1 103 CYS n 1 104 THR n 1 105 ARG n 1 106 MET n 1 107 MET n 1 108 GLU n 1 109 THR n 1 110 GLN n 1 111 THR n 1 112 SER n 1 113 THR n 1 114 TRP n 1 115 PHE n 1 116 GLY n 1 117 PHE n 1 118 ASN n 1 119 GLY n 1 120 THR n 1 121 ARG n 1 122 ALA n 1 123 GLU n 1 124 ASN n 1 125 ARG n 1 126 THR n 1 127 TYR n 1 128 ILE n 1 129 TYR n 1 130 TRP n 1 131 HIS n 1 132 GLY n 1 133 ARG n 1 134 ASP n 1 135 ASN n 1 136 ARG n 1 137 THR n 1 138 ILE n 1 139 ILE n 1 140 SER n 1 141 LEU n 1 142 ASN n 1 143 LYS n 1 144 TYR n 1 145 TYR n 1 146 ASN n 1 147 LEU n 1 148 THR n 1 149 MET n 1 150 LYS n 1 151 CYS n 1 152 ARG n 1 153 GLY n 1 154 ALA n 1 155 GLY n 1 156 TRP n 1 157 CYS n 1 158 TRP n 1 159 PHE n 1 160 GLY n 1 161 GLY n 1 162 ASN n 1 163 TRP n 1 164 LYS n 1 165 ASP n 1 166 ALA n 1 167 ILE n 1 168 LYS n 1 169 GLU n 1 170 MET n 1 171 LYS n 1 172 GLN n 1 173 THR n 1 174 ILE n 1 175 VAL n 1 176 LYS n 1 177 HIS n 1 178 PRO n 1 179 ARG n 1 180 TYR n 1 181 THR n 1 182 GLY n 1 183 THR n 1 184 ASN n 1 185 ASN n 1 186 THR n 1 187 ASP n 1 188 LYS n 1 189 ILE n 1 190 ASN n 1 191 LEU n 1 192 THR n 1 193 ALA n 1 194 PRO n 1 195 ARG n 1 196 GLY n 1 197 GLY n 1 198 ASP n 1 199 PRO n 1 200 GLU n 1 201 VAL n 1 202 THR n 1 203 PHE n 1 204 MET n 1 205 TRP n 1 206 THR n 1 207 ASN n 1 208 CYS n 1 209 ARG n 1 210 GLY n 1 211 GLU n 1 212 PHE n 1 213 LEU n 1 214 TYR n 1 215 CYS n 1 216 LYS n 1 217 MET n 1 218 ASN n 1 219 TRP n 1 220 PHE n 1 221 LEU n 1 222 ASN n 1 223 TRP n 1 224 VAL n 1 225 GLU n 1 226 ASP n 1 227 ARG n 1 228 ASP n 1 229 VAL n 1 230 THR n 1 231 ASN n 1 232 GLN n 1 233 ARG n 1 234 PRO n 1 235 LYS n 1 236 GLU n 1 237 ARG n 1 238 HIS n 1 239 ARG n 1 240 ARG n 1 241 ASN n 1 242 TYR n 1 243 VAL n 1 244 PRO n 1 245 CYS n 1 246 HIS n 1 247 ILE n 1 248 ARG n 1 249 GLN n 1 250 ILE n 1 251 ILE n 1 252 ASN n 1 253 THR n 1 254 TRP n 1 255 HIS n 1 256 LYS n 1 257 VAL n 1 258 GLY n 1 259 LYS n 1 260 ASN n 1 261 VAL n 1 262 TYR n 1 263 LEU n 1 264 PRO n 1 265 PRO n 1 266 ARG n 1 267 GLU n 1 268 GLY n 1 269 ASP n 1 270 LEU n 1 271 THR n 1 272 CYS n 1 273 ASN n 1 274 SER n 1 275 THR n 1 276 VAL n 1 277 THR n 1 278 SER n 1 279 LEU n 1 280 ILE n 1 281 ALA n 1 282 ASN n 1 283 ILE n 1 284 ASP n 1 285 TRP n 1 286 THR n 1 287 ASP n 1 288 GLY n 1 289 ASN n 1 290 GLN n 1 291 THR n 1 292 ASN n 1 293 ILE n 1 294 THR n 1 295 MET n 1 296 SER n 1 297 ALA n 1 298 GLU n 1 299 VAL n 1 300 ALA n 1 301 GLU n 1 302 LEU n 1 303 TYR n 1 304 ARG n 1 305 LEU n 1 306 GLU n 1 307 LEU n 1 308 GLY n 1 309 ASP n 1 310 TYR n 1 311 LYS n 1 312 LEU n 1 313 VAL n 1 314 GLU n 1 315 ILE n 1 316 THR n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? 3 46 SIV-cpz ? env ? ? ? ? ? ? 'Simian immunodeficiency virus' 11723 ? ? ? ? ? ? ? ? 'Trichoplusia ni' 7111 ? ? ? ? ? ? HI5 ? ? ? ? ? ? ? PFAST-BAC1 ? ? ? PSIVGP120CORE ? ? 1 3 sample ? 156 316 SIV-cpz ? env ? ? ? ? ? ? 'Simian immunodeficiency virus' 11723 ? ? ? ? ? ? ? ? 'Trichoplusia ni' 7111 ? ? ? ? ? ? HI5 ? ? ? ? ? ? ? PFAST-BAC1 ? ? ? PSIVGP120CORE ? ? 1 2 sample ? 50 152 SIV-cpz ? env ? ? ? ? ? ? 'Simian immunodeficiency virus' 11723 ? ? ? ? ? ? ? ? 'Trichoplusia ni' 7111 ? ? ? ? ? ? HI5 ? ? ? ? ? ? ? PFAST-BAC1 ? ? ? PSIVGP120CORE ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q07374_SIVCZ Q07374 1 ELALNVTESFDAWENTVTEQAIEDVWQLFETSIKPCVKLSPLCI 66 ? 2 UNP Q07374_SIVCZ Q07374 1 ;HCNTSIIQESCDKHYWDTIRFRYCAPPGYALLRCNDTNYSGFMPKCSKVVVSSCTRMMETQTSTWFGFNGTRAENRTYIY WHGRDNRTIISLNKYYNLTMKCR ; 209 ? 3 UNP Q07374_SIVCZ Q07374 1 ;WCWFGGNWKDAIKEMKQTIVKHPRYTGTNNTDKINLTAPRGGDPEVTFMWTNCRGEFLYCKMNWFLNWVEDRDVTNQRPK ERHRRNYVPCHIRQIINTWHKVGKNVYLPPREGDLTCNSTVTSLIANIDWTDGNQTNITMSAEVAELYRLELGDYKLVEI T ; 342 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3FUS A 3 ? 46 ? Q07374 66 ? 109 ? 66 109 2 2 3FUS A 50 ? 152 ? Q07374 209 ? 311 ? 209 311 3 3 3FUS A 156 ? 316 ? Q07374 342 ? 502 ? 342 502 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3FUS HIS A 1 ? UNP Q07374 ? ? 'expression tag' 64 1 1 3FUS MET A 2 ? UNP Q07374 ? ? 'expression tag' 65 2 1 3FUS GLY A 47 ? UNP Q07374 ? ? linker 110 3 1 3FUS ALA A 48 ? UNP Q07374 ? ? linker 207 4 1 3FUS GLY A 49 ? UNP Q07374 ? ? linker 208 5 1 3FUS GLY A 153 ? UNP Q07374 ? ? linker 312 6 1 3FUS ALA A 154 ? UNP Q07374 ? ? linker 313 7 1 3FUS GLY A 155 ? UNP Q07374 ? ? linker 341 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose ? 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUL 'L-saccharide, beta linking' . beta-L-fucopyranose 6-DEOXY-BETA-L-GALACTOSE 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose ? 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3FUS _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.66 _exptl_crystal.density_percent_sol 73.62 _exptl_crystal.description 'AUTHOR USED THE SF DATA FROM ENTRY 2BF1.' _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 3FUS _refine.ls_number_reflns_obs 5842 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25.58 _refine.ls_d_res_high 4.00 _refine.ls_percent_reflns_obs 100.00 _refine.ls_R_factor_obs 0.34618 _refine.ls_R_factor_all 0.34618 _refine.ls_R_factor_R_work 0.34581 _refine.ls_R_factor_R_free 0.35351 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.6 _refine.ls_number_reflns_R_free 279 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.854 _refine.correlation_coeff_Fo_to_Fc_free 0.883 _refine.B_iso_mean 131.846 _refine.aniso_B[1][1] -0.61 _refine.aniso_B[2][2] -0.61 _refine.aniso_B[3][3] 1.21 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 3.00 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 2.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIRAS _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 1.053 _refine.overall_SU_ML 1.516 _refine.overall_SU_B 244.543 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2470 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 670 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 3140 _refine_hist.d_res_high 4.00 _refine_hist.d_res_low 25.58 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.011 0.021 ? 3267 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.055 2.173 ? 4517 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.717 5.000 ? 302 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 45.590 23.600 ? 125 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 24.328 15.000 ? 426 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.950 15.000 ? 19 'X-RAY DIFFRACTION' ? r_chiral_restr 0.173 0.200 ? 629 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 2049 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.307 0.200 ? 1750 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.342 0.200 ? 2191 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.261 0.200 ? 119 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.430 0.200 ? 84 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.322 0.200 ? 10 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 4.000 _refine_ls_shell.d_res_low 4.101 _refine_ls_shell.number_reflns_R_work 400 _refine_ls_shell.R_factor_R_work 0.370 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.381 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 19 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3FUS _struct.title 'Improved Structure of the Unliganded Simian Immunodeficiency Virus gp120 Core' _struct.pdbx_descriptor 'EXTERIOR MEMBRANE GLYCOPROTEIN GP120' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3FUS _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' _struct_keywords.text ;SIV, AIDS, gp120, structural refinement, normal mode, Apoptosis, Cell membrane, Envelope protein, Fusion protein, Host-virus interaction, Membrane, Transmembrane, Virion, VIRAL PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 8 ? I N N 9 ? J N N 10 ? K N N 3 ? L N N 11 ? M N N 12 ? N N N 12 ? # _struct_biol.id 1 _struct_biol.details 'GP120 CORE, RESIDUES 66-109, 209-311, 342-502' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 18 ? GLU A 32 ? THR A 81 GLU A 95 1 ? 15 HELX_P HELX_P2 2 ARG A 105 ? THR A 109 ? ARG A 264 THR A 268 5 ? 5 HELX_P HELX_P3 3 ASN A 162 ? VAL A 175 ? ASN A 348 VAL A 361 1 ? 14 HELX_P HELX_P4 4 ASN A 218 ? ASN A 222 ? ASN A 404 ASN A 408 5 ? 5 HELX_P HELX_P5 5 GLU A 298 ? ARG A 304 ? GLU A 484 ARG A 490 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 38 SG ? ? ? 1_555 A CYS 60 SG ? ? A CYS 101 A CYS 219 1_555 ? ? ? ? ? ? ? 2.004 ? ? disulf2 disulf ? ? A CYS 45 SG ? ? ? 1_555 A CYS 51 SG ? ? A CYS 108 A CYS 210 1_555 ? ? ? ? ? ? ? 2.243 ? ? disulf3 disulf ? ? A CYS 73 SG ? ? ? 1_555 A CYS 103 SG ? ? A CYS 232 A CYS 262 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf4 disulf ? ? A CYS 83 SG ? ? ? 1_555 A CYS 95 SG ? ? A CYS 242 A CYS 254 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf5 disulf ? ? A CYS 151 SG ? ? ? 1_555 A CYS 157 SG ? ? A CYS 310 A CYS 343 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf6 disulf ? ? A CYS 208 SG ? ? ? 1_555 A CYS 272 SG ? ? A CYS 394 A CYS 458 1_555 ? ? ? ? ? ? ? 2.189 ? ? disulf7 disulf ? ? A CYS 215 SG ? ? ? 1_555 A CYS 245 SG ? ? A CYS 401 A CYS 431 1_555 ? ? ? ? ? ? ? 2.029 ? ? covale1 covale one ? M NAG . C1 ? ? ? 1_555 A ASN 7 ND2 ? ? A NAG 1 A ASN 70 1_555 ? ? ? ? ? ? ? 1.445 ? N-Glycosylation covale2 covale one ? N NAG . C1 ? ? ? 1_555 A ASN 52 ND2 ? ? A NAG 2 A ASN 211 1_555 ? ? ? ? ? ? ? 1.484 ? N-Glycosylation covale3 covale one ? A ASN 84 ND2 ? ? ? 1_555 K NAG . C1 ? ? A ASN 243 K NAG 1 1_555 ? ? ? ? ? ? ? 1.444 ? N-Glycosylation covale4 covale one ? A ASN 87 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 246 B NAG 1 1_555 ? ? ? ? ? ? ? 1.456 ? N-Glycosylation covale5 covale one ? A ASN 118 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 277 C NAG 1 1_555 ? ? ? ? ? ? ? 1.430 ? N-Glycosylation covale6 covale one ? A ASN 124 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 283 D NAG 1 1_555 ? ? ? ? ? ? ? 1.445 ? N-Glycosylation covale7 covale one ? A ASN 135 ND2 ? ? ? 1_555 E NAG . C1 ? ? A ASN 294 E NAG 1 1_555 ? ? ? ? ? ? ? 1.442 ? N-Glycosylation covale8 covale one ? A ASN 146 ND2 ? ? ? 1_555 F NAG . C1 ? ? A ASN 305 F NAG 1 1_555 ? ? ? ? ? ? ? 1.452 ? N-Glycosylation covale9 covale one ? A ASN 184 ND2 ? ? ? 1_555 G NAG . C1 ? ? A ASN 370 G NAG 1 1_555 ? ? ? ? ? ? ? 1.447 ? N-Glycosylation covale10 covale one ? A ASN 190 ND2 ? ? ? 1_555 H NAG . C1 ? ? A ASN 376 H NAG 1 1_555 ? ? ? ? ? ? ? 1.468 ? N-Glycosylation covale11 covale one ? A ASN 273 ND2 ? ? ? 1_555 I NAG . C1 ? ? A ASN 459 I NAG 1 1_555 ? ? ? ? ? ? ? 1.451 ? N-Glycosylation covale12 covale one ? A ASN 289 ND2 ? ? ? 1_555 J NAG . C1 ? ? A ASN 475 J NAG 1 1_555 ? ? ? ? ? ? ? 1.461 ? N-Glycosylation covale13 covale one ? A ASN 292 ND2 ? ? ? 1_555 L NAG . C1 ? ? A ASN 478 L NAG 1 1_555 ? ? ? ? ? ? ? 1.449 ? N-Glycosylation covale14 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.456 ? ? covale15 covale both ? B NAG . O6 ? ? ? 1_555 B FUL . C1 ? ? B NAG 1 B FUL 5 1_555 ? ? ? ? ? ? ? 1.434 ? ? covale16 covale both ? B NAG . O4 ? ? ? 1_555 B BMA . C1 ? ? B NAG 2 B BMA 3 1_555 ? ? ? ? ? ? ? 1.443 ? ? covale17 covale both ? B BMA . O3 ? ? ? 1_555 B BMA . C1 ? ? B BMA 3 B BMA 4 1_555 ? ? ? ? ? ? ? 1.450 ? ? covale18 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.443 ? ? covale19 covale both ? C NAG . O6 ? ? ? 1_555 C FUL . C1 ? ? C NAG 1 C FUL 6 1_555 ? ? ? ? ? ? ? 1.430 ? ? covale20 covale both ? C NAG . O4 ? ? ? 1_555 C BMA . C1 ? ? C NAG 2 C BMA 3 1_555 ? ? ? ? ? ? ? 1.449 ? ? covale21 covale both ? C BMA . O3 ? ? ? 1_555 C MAN . C1 ? ? C BMA 3 C MAN 4 1_555 ? ? ? ? ? ? ? 1.450 ? ? covale22 covale both ? C BMA . O6 ? ? ? 1_555 C MAN . C1 ? ? C BMA 3 C MAN 5 1_555 ? ? ? ? ? ? ? 1.446 ? ? covale23 covale both ? D NAG . O4 ? ? ? 1_555 D NAG . C1 ? ? D NAG 1 D NAG 2 1_555 ? ? ? ? ? ? ? 1.448 ? ? covale24 covale both ? D NAG . O6 ? ? ? 1_555 D FUL . C1 ? ? D NAG 1 D FUL 3 1_555 ? ? ? ? ? ? ? 1.437 ? ? covale25 covale both ? E NAG . O4 ? ? ? 1_555 E NAG . C1 ? ? E NAG 1 E NAG 2 1_555 ? ? ? ? ? ? ? 1.455 ? ? covale26 covale both ? E NAG . O6 ? ? ? 1_555 E FUL . C1 ? ? E NAG 1 E FUL 4 1_555 ? ? ? ? ? ? ? 1.443 ? ? covale27 covale both ? E NAG . O4 ? ? ? 1_555 E MAN . C1 ? ? E NAG 2 E MAN 3 1_555 ? ? ? ? ? ? ? 1.451 ? ? covale28 covale both ? F NAG . O4 ? ? ? 1_555 F NAG . C1 ? ? F NAG 1 F NAG 2 1_555 ? ? ? ? ? ? ? 1.444 ? ? covale29 covale both ? F NAG . O6 ? ? ? 1_555 F FUL . C1 ? ? F NAG 1 F FUL 4 1_555 ? ? ? ? ? ? ? 1.434 ? ? covale30 covale both ? F NAG . O4 ? ? ? 1_555 F BMA . C1 ? ? F NAG 2 F BMA 3 1_555 ? ? ? ? ? ? ? 1.454 ? ? covale31 covale both ? G NAG . O4 ? ? ? 1_555 G NAG . C1 ? ? G NAG 1 G NAG 2 1_555 ? ? ? ? ? ? ? 1.423 ? ? covale32 covale both ? H NAG . O4 ? ? ? 1_555 H NAG . C1 ? ? H NAG 1 H NAG 2 1_555 ? ? ? ? ? ? ? 1.444 ? ? covale33 covale both ? H NAG . O6 ? ? ? 1_555 H FUL . C1 ? ? H NAG 1 H FUL 6 1_555 ? ? ? ? ? ? ? 1.430 ? ? covale34 covale both ? H NAG . O4 ? ? ? 1_555 H BMA . C1 ? ? H NAG 2 H BMA 3 1_555 ? ? ? ? ? ? ? 1.453 ? ? covale35 covale both ? H BMA . O6 ? ? ? 1_555 H BMA . C1 ? ? H BMA 3 H BMA 4 1_555 ? ? ? ? ? ? ? 1.448 ? ? covale36 covale both ? H BMA . O3 ? ? ? 1_555 H MAN . C1 ? ? H BMA 4 H MAN 5 1_555 ? ? ? ? ? ? ? 1.439 ? ? covale37 covale both ? I NAG . O4 ? ? ? 1_555 I NAG . C1 ? ? I NAG 1 I NAG 2 1_555 ? ? ? ? ? ? ? 1.450 ? ? covale38 covale both ? I NAG . O4 ? ? ? 1_555 I BMA . C1 ? ? I NAG 2 I BMA 3 1_555 ? ? ? ? ? ? ? 1.451 ? ? covale39 covale both ? I BMA . O3 ? ? ? 1_555 I BMA . C1 ? ? I BMA 3 I BMA 4 1_555 ? ? ? ? ? ? ? 1.461 ? ? covale40 covale both ? I BMA . O6 ? ? ? 1_555 I MAN . C1 ? ? I BMA 3 I MAN 7 1_555 ? ? ? ? ? ? ? 1.449 ? ? covale41 covale both ? I BMA . O2 ? ? ? 1_555 I MAN . C1 ? ? I BMA 4 I MAN 5 1_555 ? ? ? ? ? ? ? 1.451 ? ? covale42 covale both ? I MAN . O2 ? ? ? 1_555 I BMA . C1 ? ? I MAN 5 I BMA 6 1_555 ? ? ? ? ? ? ? 1.450 ? ? covale43 covale both ? J NAG . O4 ? ? ? 1_555 J NAG . C1 ? ? J NAG 1 J NAG 2 1_555 ? ? ? ? ? ? ? 1.458 ? ? covale44 covale both ? J NAG . O4 ? ? ? 1_555 J BMA . C1 ? ? J NAG 2 J BMA 3 1_555 ? ? ? ? ? ? ? 1.459 ? ? covale45 covale both ? J BMA . O3 ? ? ? 1_555 J MAN . C1 ? ? J BMA 3 J MAN 4 1_555 ? ? ? ? ? ? ? 1.447 ? ? covale46 covale both ? J BMA . O6 ? ? ? 1_555 J MAN . C1 ? ? J BMA 3 J MAN 6 1_555 ? ? ? ? ? ? ? 1.442 ? ? covale47 covale both ? J MAN . O2 ? ? ? 1_555 J MAN . C1 ? ? J MAN 4 J MAN 5 1_555 ? ? ? ? ? ? ? 1.444 ? ? covale48 covale both ? K NAG . O4 ? ? ? 1_555 K NAG . C1 ? ? K NAG 1 K NAG 2 1_555 ? ? ? ? ? ? ? 1.456 ? ? covale49 covale both ? K NAG . O6 ? ? ? 1_555 K FUL . C1 ? ? K NAG 1 K FUL 6 1_555 ? ? ? ? ? ? ? 1.441 ? ? covale50 covale both ? K NAG . O4 ? ? ? 1_555 K BMA . C1 ? ? K NAG 2 K BMA 3 1_555 ? ? ? ? ? ? ? 1.444 ? ? covale51 covale both ? K BMA . O3 ? ? ? 1_555 K MAN . C1 ? ? K BMA 3 K MAN 4 1_555 ? ? ? ? ? ? ? 1.443 ? ? covale52 covale both ? K BMA . O6 ? ? ? 1_555 K MAN . C1 ? ? K BMA 3 K MAN 5 1_555 ? ? ? ? ? ? ? 1.447 ? ? covale53 covale both ? L NAG . O4 ? ? ? 1_555 L NAG . C1 ? ? L NAG 1 L NAG 2 1_555 ? ? ? ? ? ? ? 1.463 ? ? covale54 covale both ? L NAG . O4 ? ? ? 1_555 L BMA . C1 ? ? L NAG 2 L BMA 3 1_555 ? ? ? ? ? ? ? 1.424 ? ? covale55 covale both ? L BMA . O6 ? ? ? 1_555 L MAN . C1 ? ? L BMA 3 L MAN 4 1_555 ? ? ? ? ? ? ? 1.456 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? C ? 4 ? D ? 3 ? E ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel E 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PRO A 43 ? LEU A 44 ? PRO A 106 LEU A 107 A 2 ASN A 52 ? THR A 53 ? ASN A 211 THR A 212 B 1 THR A 111 ? SER A 112 ? THR A 270 SER A 271 B 2 MET A 204 ? ASN A 207 ? MET A 390 ASN A 393 B 3 LEU A 213 ? CYS A 215 ? LEU A 399 CYS A 401 C 1 PHE A 115 ? GLY A 116 ? PHE A 274 GLY A 275 C 2 SER A 278 ? ALA A 281 ? SER A 464 ALA A 467 C 3 ILE A 138 ? ASN A 142 ? ILE A 297 ASN A 301 C 4 TYR A 127 ? HIS A 131 ? TYR A 286 HIS A 290 D 1 TRP A 156 ? GLY A 161 ? TRP A 342 GLY A 347 D 2 LEU A 147 ? ARG A 152 ? LEU A 306 ARG A 311 D 3 ASN A 273 ? SER A 274 ? ASN A 459 SER A 460 E 1 ASN A 190 ? LEU A 191 ? ASN A 376 LEU A 377 E 2 ASN A 292 ? ILE A 293 ? ASN A 478 ILE A 479 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 44 ? N LEU A 107 O ASN A 52 ? O ASN A 211 B 1 2 N THR A 111 ? N THR A 270 O ASN A 207 ? O ASN A 393 B 2 3 N MET A 204 ? N MET A 390 O CYS A 215 ? O CYS A 401 C 1 2 N GLY A 116 ? N GLY A 275 O SER A 278 ? O SER A 464 C 2 3 O ALA A 281 ? O ALA A 467 N ILE A 139 ? N ILE A 298 C 3 4 O ASN A 142 ? O ASN A 301 N TYR A 127 ? N TYR A 286 D 1 2 O TRP A 158 ? O TRP A 344 N LYS A 150 ? N LYS A 309 D 2 3 N MET A 149 ? N MET A 308 O SER A 274 ? O SER A 460 E 1 2 N ASN A 190 ? N ASN A 376 O ILE A 293 ? O ILE A 479 # _database_PDB_matrix.entry_id 3FUS _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3FUS _atom_sites.fract_transf_matrix[1][1] 0.009255 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009255 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008496 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 'NAG B 1 HAS WRONG CHIRALITY AT ATOM C1' 2 'NAG D 1 HAS WRONG CHIRALITY AT ATOM C1' 3 'NAG G 1 HAS WRONG CHIRALITY AT ATOM C1' 4 'NAG H 1 HAS WRONG CHIRALITY AT ATOM C1' 5 'NAG A 1 HAS WRONG CHIRALITY AT ATOM C1' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 64 64 HIS HIS A . n A 1 2 MET 2 65 65 MET MET A . n A 1 3 GLU 3 66 66 GLU GLU A . n A 1 4 LEU 4 67 67 LEU LEU A . n A 1 5 ALA 5 68 68 ALA ALA A . n A 1 6 LEU 6 69 69 LEU LEU A . n A 1 7 ASN 7 70 70 ASN ASN A . n A 1 8 VAL 8 71 71 VAL VAL A . n A 1 9 THR 9 72 72 THR THR A . n A 1 10 GLU 10 73 73 GLU GLU A . n A 1 11 SER 11 74 74 SER SER A . n A 1 12 PHE 12 75 75 PHE PHE A . n A 1 13 ASP 13 76 76 ASP ASP A . n A 1 14 ALA 14 77 77 ALA ALA A . n A 1 15 TRP 15 78 78 TRP TRP A . n A 1 16 GLU 16 79 79 GLU GLU A . n A 1 17 ASN 17 80 80 ASN ASN A . n A 1 18 THR 18 81 81 THR THR A . n A 1 19 VAL 19 82 82 VAL VAL A . n A 1 20 THR 20 83 83 THR THR A . n A 1 21 GLU 21 84 84 GLU GLU A . n A 1 22 GLN 22 85 85 GLN GLN A . n A 1 23 ALA 23 86 86 ALA ALA A . n A 1 24 ILE 24 87 87 ILE ILE A . n A 1 25 GLU 25 88 88 GLU GLU A . n A 1 26 ASP 26 89 89 ASP ASP A . n A 1 27 VAL 27 90 90 VAL VAL A . n A 1 28 TRP 28 91 91 TRP TRP A . n A 1 29 GLN 29 92 92 GLN GLN A . n A 1 30 LEU 30 93 93 LEU LEU A . n A 1 31 PHE 31 94 94 PHE PHE A . n A 1 32 GLU 32 95 95 GLU GLU A . n A 1 33 THR 33 96 96 THR THR A . n A 1 34 SER 34 97 97 SER SER A . n A 1 35 ILE 35 98 98 ILE ILE A . n A 1 36 LYS 36 99 99 LYS LYS A . n A 1 37 PRO 37 100 100 PRO PRO A . n A 1 38 CYS 38 101 101 CYS CYS A . n A 1 39 VAL 39 102 102 VAL VAL A . n A 1 40 LYS 40 103 103 LYS LYS A . n A 1 41 LEU 41 104 104 LEU LEU A . n A 1 42 SER 42 105 105 SER SER A . n A 1 43 PRO 43 106 106 PRO PRO A . n A 1 44 LEU 44 107 107 LEU LEU A . n A 1 45 CYS 45 108 108 CYS CYS A . n A 1 46 ILE 46 109 109 ILE ILE A . n A 1 47 GLY 47 110 110 GLY GLY A . n A 1 48 ALA 48 207 207 ALA ALA A . n A 1 49 GLY 49 208 208 GLY GLY A . n A 1 50 HIS 50 209 209 HIS HIS A . n A 1 51 CYS 51 210 210 CYS CYS A . n A 1 52 ASN 52 211 211 ASN ASN A . n A 1 53 THR 53 212 212 THR THR A . n A 1 54 SER 54 213 213 SER SER A . n A 1 55 ILE 55 214 214 ILE ILE A . n A 1 56 ILE 56 215 215 ILE ILE A . n A 1 57 GLN 57 216 216 GLN GLN A . n A 1 58 GLU 58 217 217 GLU GLU A . n A 1 59 SER 59 218 218 SER SER A . n A 1 60 CYS 60 219 219 CYS CYS A . n A 1 61 ASP 61 220 ? ? ? A . n A 1 62 LYS 62 221 ? ? ? A . n A 1 63 HIS 63 222 ? ? ? A . n A 1 64 TYR 64 223 ? ? ? A . n A 1 65 TRP 65 224 ? ? ? A . n A 1 66 ASP 66 225 ? ? ? A . n A 1 67 THR 67 226 ? ? ? A . n A 1 68 ILE 68 227 ? ? ? A . n A 1 69 ARG 69 228 ? ? ? A . n A 1 70 PHE 70 229 229 PHE PHE A . n A 1 71 ARG 71 230 230 ARG ARG A . n A 1 72 TYR 72 231 231 TYR TYR A . n A 1 73 CYS 73 232 232 CYS CYS A . n A 1 74 ALA 74 233 233 ALA ALA A . n A 1 75 PRO 75 234 234 PRO PRO A . n A 1 76 PRO 76 235 235 PRO PRO A . n A 1 77 GLY 77 236 236 GLY GLY A . n A 1 78 TYR 78 237 237 TYR TYR A . n A 1 79 ALA 79 238 238 ALA ALA A . n A 1 80 LEU 80 239 239 LEU LEU A . n A 1 81 LEU 81 240 240 LEU LEU A . n A 1 82 ARG 82 241 241 ARG ARG A . n A 1 83 CYS 83 242 242 CYS CYS A . n A 1 84 ASN 84 243 243 ASN ASN A . n A 1 85 ASP 85 244 244 ASP ASP A . n A 1 86 THR 86 245 245 THR THR A . n A 1 87 ASN 87 246 246 ASN ASN A . n A 1 88 TYR 88 247 247 TYR TYR A . n A 1 89 SER 89 248 248 SER SER A . n A 1 90 GLY 90 249 249 GLY GLY A . n A 1 91 PHE 91 250 250 PHE PHE A . n A 1 92 MET 92 251 251 MET MET A . n A 1 93 PRO 93 252 252 PRO PRO A . n A 1 94 LYS 94 253 253 LYS LYS A . n A 1 95 CYS 95 254 254 CYS CYS A . n A 1 96 SER 96 255 255 SER SER A . n A 1 97 LYS 97 256 256 LYS LYS A . n A 1 98 VAL 98 257 257 VAL VAL A . n A 1 99 VAL 99 258 258 VAL VAL A . n A 1 100 VAL 100 259 259 VAL VAL A . n A 1 101 SER 101 260 260 SER SER A . n A 1 102 SER 102 261 261 SER SER A . n A 1 103 CYS 103 262 262 CYS CYS A . n A 1 104 THR 104 263 263 THR THR A . n A 1 105 ARG 105 264 264 ARG ARG A . n A 1 106 MET 106 265 265 MET MET A . n A 1 107 MET 107 266 266 MET MET A . n A 1 108 GLU 108 267 267 GLU GLU A . n A 1 109 THR 109 268 268 THR THR A . n A 1 110 GLN 110 269 269 GLN GLN A . n A 1 111 THR 111 270 270 THR THR A . n A 1 112 SER 112 271 271 SER SER A . n A 1 113 THR 113 272 272 THR THR A . n A 1 114 TRP 114 273 273 TRP TRP A . n A 1 115 PHE 115 274 274 PHE PHE A . n A 1 116 GLY 116 275 275 GLY GLY A . n A 1 117 PHE 117 276 276 PHE PHE A . n A 1 118 ASN 118 277 277 ASN ASN A . n A 1 119 GLY 119 278 278 GLY GLY A . n A 1 120 THR 120 279 279 THR THR A . n A 1 121 ARG 121 280 280 ARG ARG A . n A 1 122 ALA 122 281 281 ALA ALA A . n A 1 123 GLU 123 282 282 GLU GLU A . n A 1 124 ASN 124 283 283 ASN ASN A . n A 1 125 ARG 125 284 284 ARG ARG A . n A 1 126 THR 126 285 285 THR THR A . n A 1 127 TYR 127 286 286 TYR TYR A . n A 1 128 ILE 128 287 287 ILE ILE A . n A 1 129 TYR 129 288 288 TYR TYR A . n A 1 130 TRP 130 289 289 TRP TRP A . n A 1 131 HIS 131 290 290 HIS HIS A . n A 1 132 GLY 132 291 291 GLY GLY A . n A 1 133 ARG 133 292 292 ARG ARG A . n A 1 134 ASP 134 293 293 ASP ASP A . n A 1 135 ASN 135 294 294 ASN ASN A . n A 1 136 ARG 136 295 295 ARG ARG A . n A 1 137 THR 137 296 296 THR THR A . n A 1 138 ILE 138 297 297 ILE ILE A . n A 1 139 ILE 139 298 298 ILE ILE A . n A 1 140 SER 140 299 299 SER SER A . n A 1 141 LEU 141 300 300 LEU LEU A . n A 1 142 ASN 142 301 301 ASN ASN A . n A 1 143 LYS 143 302 302 LYS LYS A . n A 1 144 TYR 144 303 303 TYR TYR A . n A 1 145 TYR 145 304 304 TYR TYR A . n A 1 146 ASN 146 305 305 ASN ASN A . n A 1 147 LEU 147 306 306 LEU LEU A . n A 1 148 THR 148 307 307 THR THR A . n A 1 149 MET 149 308 308 MET MET A . n A 1 150 LYS 150 309 309 LYS LYS A . n A 1 151 CYS 151 310 310 CYS CYS A . n A 1 152 ARG 152 311 311 ARG ARG A . n A 1 153 GLY 153 312 312 GLY GLY A . n A 1 154 ALA 154 313 313 ALA ALA A . n A 1 155 GLY 155 341 341 GLY GLY A . n A 1 156 TRP 156 342 342 TRP TRP A . n A 1 157 CYS 157 343 343 CYS CYS A . n A 1 158 TRP 158 344 344 TRP TRP A . n A 1 159 PHE 159 345 345 PHE PHE A . n A 1 160 GLY 160 346 346 GLY GLY A . n A 1 161 GLY 161 347 347 GLY GLY A . n A 1 162 ASN 162 348 348 ASN ASN A . n A 1 163 TRP 163 349 349 TRP TRP A . n A 1 164 LYS 164 350 350 LYS LYS A . n A 1 165 ASP 165 351 351 ASP ASP A . n A 1 166 ALA 166 352 352 ALA ALA A . n A 1 167 ILE 167 353 353 ILE ILE A . n A 1 168 LYS 168 354 354 LYS LYS A . n A 1 169 GLU 169 355 355 GLU GLU A . n A 1 170 MET 170 356 356 MET MET A . n A 1 171 LYS 171 357 357 LYS LYS A . n A 1 172 GLN 172 358 358 GLN GLN A . n A 1 173 THR 173 359 359 THR THR A . n A 1 174 ILE 174 360 360 ILE ILE A . n A 1 175 VAL 175 361 361 VAL VAL A . n A 1 176 LYS 176 362 362 LYS LYS A . n A 1 177 HIS 177 363 363 HIS HIS A . n A 1 178 PRO 178 364 364 PRO PRO A . n A 1 179 ARG 179 365 365 ARG ARG A . n A 1 180 TYR 180 366 366 TYR TYR A . n A 1 181 THR 181 367 367 THR THR A . n A 1 182 GLY 182 368 368 GLY GLY A . n A 1 183 THR 183 369 369 THR THR A . n A 1 184 ASN 184 370 370 ASN ASN A . n A 1 185 ASN 185 371 371 ASN ASN A . n A 1 186 THR 186 372 372 THR THR A . n A 1 187 ASP 187 373 373 ASP ASP A . n A 1 188 LYS 188 374 374 LYS LYS A . n A 1 189 ILE 189 375 375 ILE ILE A . n A 1 190 ASN 190 376 376 ASN ASN A . n A 1 191 LEU 191 377 377 LEU LEU A . n A 1 192 THR 192 378 378 THR THR A . n A 1 193 ALA 193 379 379 ALA ALA A . n A 1 194 PRO 194 380 380 PRO PRO A . n A 1 195 ARG 195 381 381 ARG ARG A . n A 1 196 GLY 196 382 382 GLY GLY A . n A 1 197 GLY 197 383 383 GLY GLY A . n A 1 198 ASP 198 384 384 ASP ASP A . n A 1 199 PRO 199 385 385 PRO PRO A . n A 1 200 GLU 200 386 386 GLU GLU A . n A 1 201 VAL 201 387 387 VAL VAL A . n A 1 202 THR 202 388 388 THR THR A . n A 1 203 PHE 203 389 389 PHE PHE A . n A 1 204 MET 204 390 390 MET MET A . n A 1 205 TRP 205 391 391 TRP TRP A . n A 1 206 THR 206 392 392 THR THR A . n A 1 207 ASN 207 393 393 ASN ASN A . n A 1 208 CYS 208 394 394 CYS CYS A . n A 1 209 ARG 209 395 395 ARG ARG A . n A 1 210 GLY 210 396 396 GLY GLY A . n A 1 211 GLU 211 397 397 GLU GLU A . n A 1 212 PHE 212 398 398 PHE PHE A . n A 1 213 LEU 213 399 399 LEU LEU A . n A 1 214 TYR 214 400 400 TYR TYR A . n A 1 215 CYS 215 401 401 CYS CYS A . n A 1 216 LYS 216 402 402 LYS LYS A . n A 1 217 MET 217 403 403 MET MET A . n A 1 218 ASN 218 404 404 ASN ASN A . n A 1 219 TRP 219 405 405 TRP TRP A . n A 1 220 PHE 220 406 406 PHE PHE A . n A 1 221 LEU 221 407 407 LEU LEU A . n A 1 222 ASN 222 408 408 ASN ASN A . n A 1 223 TRP 223 409 409 TRP TRP A . n A 1 224 VAL 224 410 410 VAL VAL A . n A 1 225 GLU 225 411 411 GLU GLU A . n A 1 226 ASP 226 412 412 ASP ASP A . n A 1 227 ARG 227 413 413 ARG ARG A . n A 1 228 ASP 228 414 414 ASP ASP A . n A 1 229 VAL 229 415 415 VAL VAL A . n A 1 230 THR 230 416 416 THR THR A . n A 1 231 ASN 231 417 417 ASN ASN A . n A 1 232 GLN 232 418 418 GLN GLN A . n A 1 233 ARG 233 419 419 ARG ARG A . n A 1 234 PRO 234 420 420 PRO PRO A . n A 1 235 LYS 235 421 421 LYS LYS A . n A 1 236 GLU 236 422 422 GLU GLU A . n A 1 237 ARG 237 423 423 ARG ARG A . n A 1 238 HIS 238 424 424 HIS HIS A . n A 1 239 ARG 239 425 425 ARG ARG A . n A 1 240 ARG 240 426 426 ARG ARG A . n A 1 241 ASN 241 427 427 ASN ASN A . n A 1 242 TYR 242 428 428 TYR TYR A . n A 1 243 VAL 243 429 429 VAL VAL A . n A 1 244 PRO 244 430 430 PRO PRO A . n A 1 245 CYS 245 431 431 CYS CYS A . n A 1 246 HIS 246 432 432 HIS HIS A . n A 1 247 ILE 247 433 433 ILE ILE A . n A 1 248 ARG 248 434 434 ARG ARG A . n A 1 249 GLN 249 435 435 GLN GLN A . n A 1 250 ILE 250 436 436 ILE ILE A . n A 1 251 ILE 251 437 437 ILE ILE A . n A 1 252 ASN 252 438 438 ASN ASN A . n A 1 253 THR 253 439 439 THR THR A . n A 1 254 TRP 254 440 440 TRP TRP A . n A 1 255 HIS 255 441 441 HIS HIS A . n A 1 256 LYS 256 442 442 LYS LYS A . n A 1 257 VAL 257 443 443 VAL VAL A . n A 1 258 GLY 258 444 444 GLY GLY A . n A 1 259 LYS 259 445 445 LYS LYS A . n A 1 260 ASN 260 446 446 ASN ASN A . n A 1 261 VAL 261 447 447 VAL VAL A . n A 1 262 TYR 262 448 448 TYR TYR A . n A 1 263 LEU 263 449 449 LEU LEU A . n A 1 264 PRO 264 450 450 PRO PRO A . n A 1 265 PRO 265 451 451 PRO PRO A . n A 1 266 ARG 266 452 452 ARG ARG A . n A 1 267 GLU 267 453 453 GLU GLU A . n A 1 268 GLY 268 454 454 GLY GLY A . n A 1 269 ASP 269 455 455 ASP ASP A . n A 1 270 LEU 270 456 456 LEU LEU A . n A 1 271 THR 271 457 457 THR THR A . n A 1 272 CYS 272 458 458 CYS CYS A . n A 1 273 ASN 273 459 459 ASN ASN A . n A 1 274 SER 274 460 460 SER SER A . n A 1 275 THR 275 461 461 THR THR A . n A 1 276 VAL 276 462 462 VAL VAL A . n A 1 277 THR 277 463 463 THR THR A . n A 1 278 SER 278 464 464 SER SER A . n A 1 279 LEU 279 465 465 LEU LEU A . n A 1 280 ILE 280 466 466 ILE ILE A . n A 1 281 ALA 281 467 467 ALA ALA A . n A 1 282 ASN 282 468 468 ASN ASN A . n A 1 283 ILE 283 469 469 ILE ILE A . n A 1 284 ASP 284 470 470 ASP ASP A . n A 1 285 TRP 285 471 471 TRP TRP A . n A 1 286 THR 286 472 472 THR THR A . n A 1 287 ASP 287 473 473 ASP ASP A . n A 1 288 GLY 288 474 474 GLY GLY A . n A 1 289 ASN 289 475 475 ASN ASN A . n A 1 290 GLN 290 476 476 GLN GLN A . n A 1 291 THR 291 477 477 THR THR A . n A 1 292 ASN 292 478 478 ASN ASN A . n A 1 293 ILE 293 479 479 ILE ILE A . n A 1 294 THR 294 480 480 THR THR A . n A 1 295 MET 295 481 481 MET MET A . n A 1 296 SER 296 482 482 SER SER A . n A 1 297 ALA 297 483 483 ALA ALA A . n A 1 298 GLU 298 484 484 GLU GLU A . n A 1 299 VAL 299 485 485 VAL VAL A . n A 1 300 ALA 300 486 486 ALA ALA A . n A 1 301 GLU 301 487 487 GLU GLU A . n A 1 302 LEU 302 488 488 LEU LEU A . n A 1 303 TYR 303 489 489 TYR TYR A . n A 1 304 ARG 304 490 490 ARG ARG A . n A 1 305 LEU 305 491 491 LEU LEU A . n A 1 306 GLU 306 492 492 GLU GLU A . n A 1 307 LEU 307 493 493 LEU LEU A . n A 1 308 GLY 308 494 494 GLY GLY A . n A 1 309 ASP 309 495 495 ASP ASP A . n A 1 310 TYR 310 496 496 TYR TYR A . n A 1 311 LYS 311 497 497 LYS LYS A . n A 1 312 LEU 312 498 498 LEU LEU A . n A 1 313 VAL 313 499 499 VAL VAL A . n A 1 314 GLU 314 500 ? ? ? A . n A 1 315 ILE 315 501 ? ? ? A . n A 1 316 THR 316 502 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code M 12 NAG 1 1 1 NAG NAG A . N 12 NAG 1 2 2 NAG NAG A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 7 A ASN 70 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 52 A ASN 211 ? ASN 'GLYCOSYLATION SITE' 3 A ASN 84 A ASN 243 ? ASN 'GLYCOSYLATION SITE' 4 A ASN 118 A ASN 277 ? ASN 'GLYCOSYLATION SITE' 5 A ASN 146 A ASN 305 ? ASN 'GLYCOSYLATION SITE' 6 A ASN 273 A ASN 459 ? ASN 'GLYCOSYLATION SITE' 7 A ASN 289 A ASN 475 ? ASN 'GLYCOSYLATION SITE' 8 A ASN 135 A ASN 294 ? ASN 'GLYCOSYLATION SITE' 9 A ASN 292 A ASN 478 ? ASN 'GLYCOSYLATION SITE' 10 A ASN 124 A ASN 283 ? ASN 'GLYCOSYLATION SITE' 11 A ASN 184 A ASN 370 ? ASN 'GLYCOSYLATION SITE' 12 A ASN 87 A ASN 246 ? ASN 'GLYCOSYLATION SITE' 13 A ASN 190 A ASN 376 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-06-30 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2011-10-05 4 'Structure model' 1 3 2017-07-26 5 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Non-polymer description' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Database references' 4 4 'Structure model' 'Source and taxonomy' 5 5 'Structure model' Advisory 6 5 'Structure model' 'Atomic model' 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Derived calculations' 9 5 'Structure model' 'Non-polymer description' 10 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' entity_src_gen 2 5 'Structure model' atom_site 3 5 'Structure model' atom_site_anisotrop 4 5 'Structure model' chem_comp 5 5 'Structure model' database_PDB_caveat 6 5 'Structure model' entity 7 5 'Structure model' pdbx_branch_scheme 8 5 'Structure model' pdbx_chem_comp_identifier 9 5 'Structure model' pdbx_entity_branch 10 5 'Structure model' pdbx_entity_branch_descriptor 11 5 'Structure model' pdbx_entity_branch_link 12 5 'Structure model' pdbx_entity_branch_list 13 5 'Structure model' pdbx_entity_nonpoly 14 5 'Structure model' pdbx_nonpoly_scheme 15 5 'Structure model' pdbx_struct_assembly_gen 16 5 'Structure model' pdbx_validate_chiral 17 5 'Structure model' pdbx_validate_close_contact 18 5 'Structure model' pdbx_validate_symm_contact 19 5 'Structure model' struct_asym 20 5 'Structure model' struct_conn 21 5 'Structure model' struct_site 22 5 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_atom_site.B_iso_or_equiv' 2 5 'Structure model' '_atom_site.Cartn_x' 3 5 'Structure model' '_atom_site.Cartn_y' 4 5 'Structure model' '_atom_site.Cartn_z' 5 5 'Structure model' '_atom_site.auth_asym_id' 6 5 'Structure model' '_atom_site.auth_atom_id' 7 5 'Structure model' '_atom_site.auth_comp_id' 8 5 'Structure model' '_atom_site.auth_seq_id' 9 5 'Structure model' '_atom_site.label_asym_id' 10 5 'Structure model' '_atom_site.label_atom_id' 11 5 'Structure model' '_atom_site.label_comp_id' 12 5 'Structure model' '_atom_site.label_entity_id' 13 5 'Structure model' '_atom_site.type_symbol' 14 5 'Structure model' '_atom_site_anisotrop.U[1][1]' 15 5 'Structure model' '_atom_site_anisotrop.U[1][2]' 16 5 'Structure model' '_atom_site_anisotrop.U[1][3]' 17 5 'Structure model' '_atom_site_anisotrop.U[2][2]' 18 5 'Structure model' '_atom_site_anisotrop.U[2][3]' 19 5 'Structure model' '_atom_site_anisotrop.U[3][3]' 20 5 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 21 5 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 22 5 'Structure model' '_atom_site_anisotrop.pdbx_auth_comp_id' 23 5 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 24 5 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 25 5 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 26 5 'Structure model' '_atom_site_anisotrop.pdbx_label_comp_id' 27 5 'Structure model' '_atom_site_anisotrop.type_symbol' 28 5 'Structure model' '_chem_comp.formula' 29 5 'Structure model' '_chem_comp.formula_weight' 30 5 'Structure model' '_chem_comp.id' 31 5 'Structure model' '_chem_comp.mon_nstd_flag' 32 5 'Structure model' '_chem_comp.name' 33 5 'Structure model' '_chem_comp.type' 34 5 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 35 5 'Structure model' '_pdbx_validate_close_contact.auth_asym_id_2' 36 5 'Structure model' '_pdbx_validate_close_contact.auth_atom_id_2' 37 5 'Structure model' '_pdbx_validate_close_contact.auth_comp_id_2' 38 5 'Structure model' '_pdbx_validate_close_contact.auth_seq_id_2' 39 5 'Structure model' '_pdbx_validate_symm_contact.auth_asym_id_1' 40 5 'Structure model' '_pdbx_validate_symm_contact.auth_asym_id_2' 41 5 'Structure model' '_pdbx_validate_symm_contact.auth_seq_id_1' 42 5 'Structure model' '_pdbx_validate_symm_contact.auth_seq_id_2' 43 5 'Structure model' '_struct_conn.pdbx_dist_value' 44 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 45 5 'Structure model' '_struct_conn.pdbx_role' 46 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 47 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 48 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 49 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 50 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 51 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 52 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 53 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 54 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 55 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 56 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 57 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 58 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 59 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' # _software.name REFMAC _software.classification refinement _software.version 5.2.0019 _software.citation_id ? _software.pdbx_ordinal 1 # _pdbx_database_remark.id 0 _pdbx_database_remark.text ;THIS ENTRY 3FUS REFLECTS AN ALTERNATIVE MODELING OF THE ORIGINAL STRUCTURAL DATA (R2BF1SF) DETERMINED BY AUTHORS OF THE PDB ENTRY 2BF1:B.CHEN,E.M.VOGAN,H.GONG,J.J.SKEHEL,D.C.WILEY,S.C.HARRISON ; # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A TRP 91 ? ? OH A TYR 448 ? ? 1.80 2 1 N A LEU 107 ? ? O A ASN 211 ? ? 2.12 3 1 O A SER 105 ? ? N A SER 213 ? ? 2.14 4 1 ND2 A ASN 283 ? ? O5 D NAG 1 ? ? 2.14 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A LEU 67 ? ? 1_555 CD1 A ILE 436 ? ? 4_455 1.88 2 1 OE1 A GLU 66 ? ? 1_555 CB A LYS 445 ? ? 4_455 2.02 3 1 O3 B FUL 5 ? ? 1_555 O3 B FUL 5 ? ? 8_555 2.14 4 1 O3 C MAN 4 ? ? 1_555 O3 E FUL 4 ? ? 6_555 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 70 ? ? -163.83 69.77 2 1 SER A 74 ? ? -157.35 -134.62 3 1 PHE A 75 ? ? -108.34 -113.87 4 1 ASP A 76 ? ? 50.44 179.95 5 1 ALA A 77 ? ? 178.80 -34.77 6 1 ASN A 80 ? ? 47.52 -138.29 7 1 SER A 97 ? ? -149.89 -32.21 8 1 ILE A 98 ? ? 179.76 169.92 9 1 LYS A 99 ? ? 166.00 -72.29 10 1 PRO A 100 ? ? -97.55 -104.91 11 1 CYS A 101 ? ? -175.72 51.19 12 1 VAL A 102 ? ? -141.57 -143.99 13 1 LYS A 103 ? ? -141.08 -50.29 14 1 CYS A 108 ? ? -151.47 -156.23 15 1 ILE A 109 ? ? 60.13 100.83 16 1 GLU A 217 ? ? 174.22 -161.51 17 1 CYS A 232 ? ? -78.76 -84.31 18 1 ALA A 233 ? ? -173.56 -53.63 19 1 PRO A 235 ? ? -67.62 78.68 20 1 CYS A 242 ? ? -80.49 -114.59 21 1 ASN A 243 ? ? 173.26 -164.09 22 1 THR A 245 ? ? 178.91 -178.27 23 1 ASN A 246 ? ? -52.42 -76.72 24 1 TYR A 247 ? ? 176.69 149.45 25 1 SER A 248 ? ? -132.38 -62.10 26 1 PHE A 250 ? ? -116.83 -166.90 27 1 SER A 255 ? ? -154.70 -97.91 28 1 SER A 260 ? ? 161.03 157.87 29 1 SER A 261 ? ? -165.36 -70.87 30 1 CYS A 262 ? ? -38.70 138.31 31 1 MET A 265 ? ? -16.54 -62.43 32 1 THR A 268 ? ? -97.70 -139.42 33 1 TRP A 273 ? ? -113.18 -74.00 34 1 PHE A 276 ? ? -76.52 -106.43 35 1 THR A 279 ? ? 63.35 101.44 36 1 ARG A 280 ? ? 38.07 59.91 37 1 ARG A 284 ? ? -55.22 102.44 38 1 ARG A 292 ? ? -149.89 33.18 39 1 ASP A 293 ? ? 67.32 -129.55 40 1 SER A 299 ? ? -162.51 109.66 41 1 TYR A 304 ? ? -25.45 156.72 42 1 PRO A 364 ? ? -60.77 96.73 43 1 TYR A 366 ? ? -20.52 94.19 44 1 ALA A 379 ? ? -124.17 -61.49 45 1 PRO A 385 ? ? -90.60 -126.20 46 1 GLU A 386 ? ? 169.46 14.32 47 1 CYS A 394 ? ? -170.85 128.33 48 1 ASN A 404 ? ? -132.46 -53.04 49 1 PRO A 420 ? ? -52.35 178.96 50 1 TRP A 440 ? ? -74.40 -72.63 51 1 LYS A 442 ? ? -175.19 131.88 52 1 VAL A 443 ? ? -67.09 77.54 53 1 THR A 463 ? ? 154.76 -72.96 54 1 SER A 464 ? ? -64.56 69.95 55 1 ASP A 473 ? ? -37.69 132.93 56 1 ASN A 475 ? ? -109.34 57.31 57 1 THR A 480 ? ? -132.29 -133.96 58 1 MET A 481 ? ? 166.48 16.92 59 1 GLU A 484 ? ? -120.01 -155.36 60 1 VAL A 485 ? ? -29.79 -40.55 61 1 ARG A 490 ? ? -55.26 -6.30 62 1 LEU A 493 ? ? -68.71 -91.18 63 1 LEU A 498 ? ? -97.44 -146.74 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 C1 ? B NAG 1 ? 'WRONG HAND' . 2 1 C1 ? D NAG 1 ? 'WRONG HAND' . 3 1 C1 ? G NAG 1 ? 'WRONG HAND' . 4 1 C1 ? H NAG 1 ? PLANAR . 5 1 C1 ? A NAG 1 ? PLANAR . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 220 ? A ASP 61 2 1 Y 1 A LYS 221 ? A LYS 62 3 1 Y 1 A HIS 222 ? A HIS 63 4 1 Y 1 A TYR 223 ? A TYR 64 5 1 Y 1 A TRP 224 ? A TRP 65 6 1 Y 1 A ASP 225 ? A ASP 66 7 1 Y 1 A THR 226 ? A THR 67 8 1 Y 1 A ILE 227 ? A ILE 68 9 1 Y 1 A ARG 228 ? A ARG 69 10 1 Y 1 A GLU 500 ? A GLU 314 11 1 Y 1 A ILE 501 ? A ILE 315 12 1 Y 1 A THR 502 ? A THR 316 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NDG 3 n B 2 NAG 2 B NAG 2 A NAG 4 n B 2 BMA 3 B BMA 3 A BMA 5 n B 2 BMA 4 B BMA 4 A BMA 51 n B 2 FUL 5 B FUL 5 A FUL 6 n C 3 NAG 1 C NAG 1 A NAG 7 n C 3 NAG 2 C NAG 2 A NAG 8 n C 3 BMA 3 C BMA 3 A BMA 9 n C 3 MAN 4 C MAN 4 A MAN 10 n C 3 MAN 5 C MAN 5 A MAN 11 n C 3 FUL 6 C FUL 6 A FUL 12 n D 4 NAG 1 D NAG 1 A NDG 13 n D 4 NAG 2 D NAG 2 A NAG 14 n D 4 FUL 3 D FUL 3 A FUL 15 n E 5 NAG 1 E NAG 1 A NAG 16 n E 5 NAG 2 E NAG 2 A NAG 17 n E 5 MAN 3 E MAN 3 A MAN 52 n E 5 FUL 4 E FUL 4 A FUL 18 n F 6 NAG 1 F NAG 1 A NAG 19 n F 6 NAG 2 F NAG 2 A NAG 20 n F 6 BMA 3 F BMA 3 A BMA 21 n F 6 FUL 4 F FUL 4 A FUL 22 n G 7 NAG 1 G NAG 1 A NDG 23 n G 7 NAG 2 G NAG 2 A NAG 24 n H 8 NAG 1 H NAG 1 A NDG 25 n H 8 NAG 2 H NAG 2 A NAG 26 n H 8 BMA 3 H BMA 3 A BMA 27 n H 8 BMA 4 H BMA 4 A BMA 55 n H 8 MAN 5 H MAN 5 A MAN 56 n H 8 FUL 6 H FUL 6 A FUL 28 n I 9 NAG 1 I NAG 1 A NAG 29 n I 9 NAG 2 I NAG 2 A NAG 30 n I 9 BMA 3 I BMA 3 A BMA 31 n I 9 BMA 4 I BMA 4 A BMA 32 n I 9 MAN 5 I MAN 5 A MAN 33 n I 9 BMA 6 I BMA 6 A BMA 34 n I 9 MAN 7 I MAN 7 A MAN 35 n J 10 NAG 1 J NAG 1 A NAG 36 n J 10 NAG 2 J NAG 2 A NAG 37 n J 10 BMA 3 J BMA 3 A BMA 38 n J 10 MAN 4 J MAN 4 A MAN 39 n J 10 MAN 5 J MAN 5 A MAN 53 n J 10 MAN 6 J MAN 6 A MAN 40 n K 3 NAG 1 K NAG 1 A NAG 41 n K 3 NAG 2 K NAG 2 A NAG 42 n K 3 BMA 3 K BMA 3 A BMA 43 n K 3 MAN 4 K MAN 4 A MAN 44 n K 3 MAN 5 K MAN 5 A MAN 45 n K 3 FUL 6 K FUL 6 A FUL 46 n L 11 NAG 1 L NAG 1 A NAG 47 n L 11 NAG 2 L NAG 2 A NAG 48 n L 11 BMA 3 L BMA 3 A BMA 49 n L 11 MAN 4 L MAN 4 A MAN 50 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man FUL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpb FUL 'COMMON NAME' GMML 1.0 b-L-fucopyranose FUL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-L-Fucp FUL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide 4 oligosaccharide 5 oligosaccharide 6 oligosaccharide 7 oligosaccharide 8 oligosaccharide 9 oligosaccharide 10 oligosaccharide 11 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 'DManpb1-3DManpb1-4DGlcpNAcb1-4[LFucpb1-6]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/3,5,4/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1221m-1b_1-5]/1-1-2-2-3/a4-b1_a6-e1_b4-c1_c3-d1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][a-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][b-D-Manp]{}}}[(6+1)][b-L-Fucp]{}}}' LINUCS PDB-CARE ? 4 3 'DManpa1-3[DManpa1-6]DManpb1-4DGlcpNAcb1-4[LFucpb1-6]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 5 3 'WURCS=2.0/4,6,5/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a1221m-1b_1-5]/1-1-2-3-3-4/a4-b1_a6-f1_b4-c1_c3-d1_c6-e1' WURCS PDB2Glycan 1.1.0 6 3 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}[(6+1)][a-D-Manp]{}}}[(6+1)][b-L-Fucp]{}}}' LINUCS PDB-CARE ? 7 4 'DGlcpNAcb1-4[LFucpb1-6]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 8 4 'WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1b_1-5]/1-1-2/a4-b1_a6-c1' WURCS PDB2Glycan 1.1.0 9 4 '[]{[(4+1)][a-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}[(6+1)][b-L-Fucp]{}}}' LINUCS PDB-CARE ? 10 5 'DManpa1-4DGlcpNAcb1-4[LFucpb1-6]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 11 5 'WURCS=2.0/3,4,3/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1a_1-5][a1221m-1b_1-5]/1-1-2-3/a4-b1_a6-d1_b4-c1' WURCS PDB2Glycan 1.1.0 12 5 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][a-D-Manp]{}}[(6+1)][b-L-Fucp]{}}}' LINUCS PDB-CARE ? 13 6 'DManpb1-4DGlcpNAcb1-4[LFucpb1-6]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 14 6 'WURCS=2.0/3,4,3/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1221m-1b_1-5]/1-1-2-3/a4-b1_a6-d1_b4-c1' WURCS PDB2Glycan 1.1.0 15 6 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{}}[(6+1)][b-L-Fucp]{}}}' LINUCS PDB-CARE ? 16 7 DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 17 7 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 18 7 '[]{[(4+1)][a-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}' LINUCS PDB-CARE ? 19 8 'DManpa1-3DManpb1-6DManpb1-4DGlcpNAcb1-4[LFucpb1-6]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 20 8 'WURCS=2.0/4,6,5/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a1221m-1b_1-5]/1-1-2-2-3-4/a4-b1_a6-f1_b4-c1_c6-d1_d3-e1' WURCS PDB2Glycan 1.1.0 21 8 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(6+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}}}}[(6+1)][b-L-Fucp]{}}}' LINUCS PDB-CARE ? 22 9 'DManpb1-2DManpa1-2DManpb1-3[DManpa1-6]DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 23 9 'WURCS=2.0/3,7,6/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-2-3-2-3/a4-b1_b4-c1_c3-d1_c6-g1_d2-e1_e2-f1' WURCS PDB2Glycan 1.1.0 24 9 ;[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][b-D-Manp]{[(2+1)][a-D-Manp]{[(2+1)][b-D-Manp]{}}}[(6+1)][a-D-Manp]{}}}}} ; LINUCS PDB-CARE ? 25 10 'DManpa1-2DManpa1-3[DManpa1-6]DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 26 10 'WURCS=2.0/3,6,5/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3-3-3/a4-b1_b4-c1_c3-d1_c6-f1_d2-e1' WURCS PDB2Glycan 1.1.0 27 10 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{[(2+1)][a-D-Manp]{}}[(6+1)][a-D-Manp]{}}}}}' LINUCS PDB-CARE ? 28 11 DManpa1-6DManpb1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 29 11 'WURCS=2.0/3,4,3/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3/a4-b1_b4-c1_c6-d1' WURCS PDB2Glycan 1.1.0 30 11 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(6+1)][a-D-Manp]{}}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 2 4 BMA C1 O1 3 BMA O3 HO3 sing ? 4 2 5 FUL C1 O1 1 NAG O6 HO6 sing ? 5 3 2 NAG C1 O1 1 NAG O4 HO4 sing ? 6 3 3 BMA C1 O1 2 NAG O4 HO4 sing ? 7 3 4 MAN C1 O1 3 BMA O3 HO3 sing ? 8 3 5 MAN C1 O1 3 BMA O6 HO6 sing ? 9 3 6 FUL C1 O1 1 NAG O6 HO6 sing ? 10 4 2 NAG C1 O1 1 NAG O4 HO4 sing ? 11 4 3 FUL C1 O1 1 NAG O6 HO6 sing ? 12 5 2 NAG C1 O1 1 NAG O4 HO4 sing ? 13 5 3 MAN C1 O1 2 NAG O4 HO4 sing ? 14 5 4 FUL C1 O1 1 NAG O6 HO6 sing ? 15 6 2 NAG C1 O1 1 NAG O4 HO4 sing ? 16 6 3 BMA C1 O1 2 NAG O4 HO4 sing ? 17 6 4 FUL C1 O1 1 NAG O6 HO6 sing ? 18 7 2 NAG C1 O1 1 NAG O4 HO4 sing ? 19 8 2 NAG C1 O1 1 NAG O4 HO4 sing ? 20 8 3 BMA C1 O1 2 NAG O4 HO4 sing ? 21 8 4 BMA C1 O1 3 BMA O6 HO6 sing ? 22 8 5 MAN C1 O1 4 BMA O3 HO3 sing ? 23 8 6 FUL C1 O1 1 NAG O6 HO6 sing ? 24 9 2 NAG C1 O1 1 NAG O4 HO4 sing ? 25 9 3 BMA C1 O1 2 NAG O4 HO4 sing ? 26 9 4 BMA C1 O1 3 BMA O3 HO3 sing ? 27 9 5 MAN C1 O1 4 BMA O2 HO2 sing ? 28 9 6 BMA C1 O1 5 MAN O2 HO2 sing ? 29 9 7 MAN C1 O1 3 BMA O6 HO6 sing ? 30 10 2 NAG C1 O1 1 NAG O4 HO4 sing ? 31 10 3 BMA C1 O1 2 NAG O4 HO4 sing ? 32 10 4 MAN C1 O1 3 BMA O3 HO3 sing ? 33 10 5 MAN C1 O1 4 MAN O2 HO2 sing ? 34 10 6 MAN C1 O1 3 BMA O6 HO6 sing ? 35 11 2 NAG C1 O1 1 NAG O4 HO4 sing ? 36 11 3 BMA C1 O1 2 NAG O4 HO4 sing ? 37 11 4 MAN C1 O1 3 BMA O6 HO6 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 BMA 3 n 2 BMA 4 n 2 FUL 5 n 3 NAG 1 n 3 NAG 2 n 3 BMA 3 n 3 MAN 4 n 3 MAN 5 n 3 FUL 6 n 4 NAG 1 n 4 NAG 2 n 4 FUL 3 n 5 NAG 1 n 5 NAG 2 n 5 MAN 3 n 5 FUL 4 n 6 NAG 1 n 6 NAG 2 n 6 BMA 3 n 6 FUL 4 n 7 NAG 1 n 7 NAG 2 n 8 NAG 1 n 8 NAG 2 n 8 BMA 3 n 8 BMA 4 n 8 MAN 5 n 8 FUL 6 n 9 NAG 1 n 9 NAG 2 n 9 BMA 3 n 9 BMA 4 n 9 MAN 5 n 9 BMA 6 n 9 MAN 7 n 10 NAG 1 n 10 NAG 2 n 10 BMA 3 n 10 MAN 4 n 10 MAN 5 n 10 MAN 6 n 11 NAG 1 n 11 NAG 2 n 11 BMA 3 n 11 MAN 4 n # _pdbx_entity_nonpoly.entity_id 12 _pdbx_entity_nonpoly.name 2-acetamido-2-deoxy-beta-D-glucopyranose _pdbx_entity_nonpoly.comp_id NAG #