HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 16-JAN-09 3FVV TITLE THE CRYSTAL STRUCTURE OF THE PROTEIN WITH UNKNOWN FUNCTION FROM TITLE 2 BORDETELLA PERTUSSIS TOHAMA I COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BORDETELLA PERTUSSIS; SOURCE 3 ORGANISM_TAXID: 520; SOURCE 4 STRAIN: I; SOURCE 5 GENE: BP0240, GI:33571123; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG19 KEYWDS UNKNOWN FUNCTION, STRUCTURAL GENOMICS, PSI, MCSG, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, MIDWEST CENTER FOR STRUCTURAL GENOMICS EXPDTA X-RAY DIFFRACTION AUTHOR R.ZHANG,L.BIGELOW,R.JEDRZEJCZAK,A.JOACHIMIAK,MIDWEST CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (MCSG) REVDAT 4 21-FEB-24 3FVV 1 REMARK REVDAT 3 01-NOV-17 3FVV 1 REMARK REVDAT 2 13-JUL-11 3FVV 1 VERSN REVDAT 1 17-FEB-09 3FVV 0 JRNL AUTH R.ZHANG,L.BIGELOW,R.JEDRZEJCZAK,A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF THE PROTEIN WITH UNKNOWN FUNCTION JRNL TITL 2 FROM BORDETELLA PERTUSSIS TOHAMA I JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0054 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 70.89 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 27601 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1477 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.16 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2000 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.53 REMARK 3 BIN R VALUE (WORKING SET) : 0.2020 REMARK 3 BIN FREE R VALUE SET COUNT : 99 REMARK 3 BIN FREE R VALUE : 0.2770 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3472 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 159 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 20.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.19000 REMARK 3 B22 (A**2) : 0.19000 REMARK 3 B33 (A**2) : -0.28000 REMARK 3 B12 (A**2) : 0.09000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.206 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.183 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.114 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.374 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.912 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3558 ; 0.020 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 2402 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4844 ; 1.726 ; 1.953 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5764 ; 1.016 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 442 ; 6.572 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 180 ;33.727 ;22.556 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 542 ;14.483 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 42 ;18.424 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 532 ; 0.108 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4054 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 796 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2208 ; 0.936 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 896 ; 0.286 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3526 ; 1.619 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1350 ; 3.030 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1318 ; 4.791 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 4 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 50 REMARK 3 RESIDUE RANGE : A 51 A 100 REMARK 3 RESIDUE RANGE : A 101 A 150 REMARK 3 RESIDUE RANGE : A 151 A 224 REMARK 3 ORIGIN FOR THE GROUP (A): 42.2500 29.6060 1.8100 REMARK 3 T TENSOR REMARK 3 T11: 0.0265 T22: 0.0225 REMARK 3 T33: 0.0381 T12: -0.0047 REMARK 3 T13: -0.0029 T23: -0.0022 REMARK 3 L TENSOR REMARK 3 L11: 1.3448 L22: 0.2931 REMARK 3 L33: 0.4595 L12: -0.2176 REMARK 3 L13: -0.1973 L23: -0.0512 REMARK 3 S TENSOR REMARK 3 S11: -0.0483 S12: 0.0051 S13: -0.1898 REMARK 3 S21: 0.0448 S22: 0.0305 S23: 0.0385 REMARK 3 S31: 0.0233 S32: 0.0001 S33: 0.0178 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 4 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4 B 50 REMARK 3 RESIDUE RANGE : B 51 B 100 REMARK 3 RESIDUE RANGE : B 101 B 150 REMARK 3 RESIDUE RANGE : B 151 B 224 REMARK 3 ORIGIN FOR THE GROUP (A): 40.2590 57.2100 -8.0710 REMARK 3 T TENSOR REMARK 3 T11: 0.0445 T22: 0.0362 REMARK 3 T33: 0.0365 T12: -0.0234 REMARK 3 T13: -0.0302 T23: 0.0312 REMARK 3 L TENSOR REMARK 3 L11: 0.6438 L22: 0.4264 REMARK 3 L33: 0.6526 L12: -0.1793 REMARK 3 L13: 0.5261 L23: -0.0865 REMARK 3 S TENSOR REMARK 3 S11: -0.0720 S12: 0.0648 S13: 0.1062 REMARK 3 S21: 0.0180 S22: -0.0309 S23: -0.0508 REMARK 3 S31: -0.0793 S32: 0.0378 S33: 0.1029 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3FVV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-JAN-09. REMARK 100 THE DEPOSITION ID IS D_1000051106. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-APR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : SI 111, CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27601 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 70.890 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 21.70 REMARK 200 R MERGE (I) : 0.22000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.4900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 16.10 REMARK 200 R MERGE FOR SHELL (I) : 0.68800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.960 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0M DI-AMMONIUM HYDROGEN PHOSPHATE, REMARK 280 0.1M TRIS, PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.09200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 146.18400 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 109.63800 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 182.73000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 36.54600 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 73.09200 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 146.18400 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 182.73000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 109.63800 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 36.54600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THIS PROTEIN EXISTED AS DIMER. THE DEPOSITED MOLA AND MOLB REMARK 300 REPRESENT THE DIMER IN THE ASYMMETRIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 225 REMARK 465 HIS A 226 REMARK 465 LEU A 227 REMARK 465 GLU A 228 REMARK 465 ASP A 229 REMARK 465 ALA A 230 REMARK 465 LYS A 231 REMARK 465 SER A 232 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 THR B 3 REMARK 465 ASP B 225 REMARK 465 HIS B 226 REMARK 465 LEU B 227 REMARK 465 GLU B 228 REMARK 465 ASP B 229 REMARK 465 ALA B 230 REMARK 465 LYS B 231 REMARK 465 SER B 232 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O2 SO4 B 233 O HOH B 285 2.06 REMARK 500 O ASP A 12 O HOH A 316 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 86 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ASP B 21 CB - CG - OD1 ANGL. DEV. = 6.6 DEGREES REMARK 500 ARG B 86 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 11 -65.50 -101.59 REMARK 500 THR A 14 -63.63 -105.80 REMARK 500 PRO A 17 37.08 -81.92 REMARK 500 ARG A 157 -123.93 52.83 REMARK 500 LEU B 11 -68.25 -102.71 REMARK 500 THR B 14 -70.15 -105.67 REMARK 500 PRO B 17 41.85 -82.61 REMARK 500 VAL B 88 -50.14 -121.39 REMARK 500 ARG B 157 -123.35 45.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 THR A 31 GLY A 32 -59.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 233 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 233 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC60220 RELATED DB: TARGETDB DBREF 3FVV A 1 232 UNP Q7W0A9 Q7W0A9_BORPE 1 232 DBREF 3FVV B 1 232 UNP Q7W0A9 Q7W0A9_BORPE 1 232 SEQRES 1 A 232 MET THR THR ARG ARG LEU ALA LEU PHE ASP LEU ASP HIS SEQRES 2 A 232 THR LEU LEU PRO LEU ASP SER ASP TYR GLN TRP ALA ASP SEQRES 3 A 232 PHE LEU ALA ARG THR GLY ARG ALA GLY ASP PRO ALA GLU SEQRES 4 A 232 ALA ARG ARG ARG ASN ASP ASP LEU MET GLU ARG TYR ASN SEQRES 5 A 232 ARG GLY GLU LEU THR ALA GLU GLN ALA ALA GLU PHE MET SEQRES 6 A 232 LEU GLY LEU LEU ALA ALA HIS SER PRO VAL GLU LEU ALA SEQRES 7 A 232 ALA TRP HIS GLU GLU PHE MET ARG ASP VAL ILE ARG PRO SEQRES 8 A 232 SER LEU THR VAL GLN ALA VAL ASP VAL VAL ARG GLY HIS SEQRES 9 A 232 LEU ALA ALA GLY ASP LEU CYS ALA LEU VAL THR ALA THR SEQRES 10 A 232 ASN SER PHE VAL THR ALA PRO ILE ALA ARG ALA PHE GLY SEQRES 11 A 232 VAL GLN HIS LEU ILE ALA THR ASP PRO GLU TYR ARG ASP SEQRES 12 A 232 GLY ARG TYR THR GLY ARG ILE GLU GLY THR PRO SER PHE SEQRES 13 A 232 ARG GLU GLY LYS VAL VAL ARG VAL ASN GLN TRP LEU ALA SEQRES 14 A 232 GLY MET GLY LEU ALA LEU GLY ASP PHE ALA GLU SER TYR SEQRES 15 A 232 PHE TYR SER ASP SER VAL ASN ASP VAL PRO LEU LEU GLU SEQRES 16 A 232 ALA VAL THR ARG PRO ILE ALA ALA ASN PRO SER PRO GLY SEQRES 17 A 232 LEU ARG GLU ILE ALA GLN ALA ARG GLY TRP GLN VAL ILE SEQRES 18 A 232 ASP LEU PHE ASP HIS LEU GLU ASP ALA LYS SER SEQRES 1 B 232 MET THR THR ARG ARG LEU ALA LEU PHE ASP LEU ASP HIS SEQRES 2 B 232 THR LEU LEU PRO LEU ASP SER ASP TYR GLN TRP ALA ASP SEQRES 3 B 232 PHE LEU ALA ARG THR GLY ARG ALA GLY ASP PRO ALA GLU SEQRES 4 B 232 ALA ARG ARG ARG ASN ASP ASP LEU MET GLU ARG TYR ASN SEQRES 5 B 232 ARG GLY GLU LEU THR ALA GLU GLN ALA ALA GLU PHE MET SEQRES 6 B 232 LEU GLY LEU LEU ALA ALA HIS SER PRO VAL GLU LEU ALA SEQRES 7 B 232 ALA TRP HIS GLU GLU PHE MET ARG ASP VAL ILE ARG PRO SEQRES 8 B 232 SER LEU THR VAL GLN ALA VAL ASP VAL VAL ARG GLY HIS SEQRES 9 B 232 LEU ALA ALA GLY ASP LEU CYS ALA LEU VAL THR ALA THR SEQRES 10 B 232 ASN SER PHE VAL THR ALA PRO ILE ALA ARG ALA PHE GLY SEQRES 11 B 232 VAL GLN HIS LEU ILE ALA THR ASP PRO GLU TYR ARG ASP SEQRES 12 B 232 GLY ARG TYR THR GLY ARG ILE GLU GLY THR PRO SER PHE SEQRES 13 B 232 ARG GLU GLY LYS VAL VAL ARG VAL ASN GLN TRP LEU ALA SEQRES 14 B 232 GLY MET GLY LEU ALA LEU GLY ASP PHE ALA GLU SER TYR SEQRES 15 B 232 PHE TYR SER ASP SER VAL ASN ASP VAL PRO LEU LEU GLU SEQRES 16 B 232 ALA VAL THR ARG PRO ILE ALA ALA ASN PRO SER PRO GLY SEQRES 17 B 232 LEU ARG GLU ILE ALA GLN ALA ARG GLY TRP GLN VAL ILE SEQRES 18 B 232 ASP LEU PHE ASP HIS LEU GLU ASP ALA LYS SER HET SO4 A 233 5 HET SO4 B 233 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 2(O4 S 2-) FORMUL 5 HOH *159(H2 O) HELIX 1 1 ASP A 19 THR A 31 1 13 HELIX 2 2 ASP A 36 ARG A 53 1 18 HELIX 3 3 THR A 57 ALA A 71 1 15 HELIX 4 4 SER A 73 VAL A 88 1 16 HELIX 5 5 ILE A 89 LEU A 93 5 5 HELIX 6 6 THR A 94 ALA A 107 1 14 HELIX 7 7 ASN A 118 PHE A 129 1 12 HELIX 8 8 ARG A 157 MET A 171 1 15 HELIX 9 9 ALA A 174 PHE A 178 5 5 HELIX 10 10 SER A 187 ASN A 189 5 3 HELIX 11 11 ASP A 190 VAL A 197 1 8 HELIX 12 12 SER A 206 GLY A 217 1 12 HELIX 13 13 ASP B 19 THR B 31 1 13 HELIX 14 14 ASP B 36 ARG B 53 1 18 HELIX 15 15 THR B 57 ALA B 71 1 15 HELIX 16 16 SER B 73 VAL B 88 1 16 HELIX 17 17 VAL B 88 LEU B 93 1 6 HELIX 18 18 THR B 94 GLY B 108 1 15 HELIX 19 19 ASN B 118 PHE B 129 1 12 HELIX 20 20 ARG B 157 MET B 171 1 15 HELIX 21 21 ALA B 174 PHE B 178 5 5 HELIX 22 22 SER B 187 ASN B 189 5 3 HELIX 23 23 ASP B 190 VAL B 197 1 8 HELIX 24 24 SER B 206 GLY B 217 1 12 SHEET 1 A 6 HIS A 133 ALA A 136 0 SHEET 2 A 6 LEU A 110 THR A 115 1 N LEU A 113 O ILE A 135 SHEET 3 A 6 ARG A 5 PHE A 9 1 N PHE A 9 O VAL A 114 SHEET 4 A 6 GLU A 180 SER A 185 1 O TYR A 182 N LEU A 6 SHEET 5 A 6 ARG A 199 ALA A 203 1 O ARG A 199 N SER A 181 SHEET 6 A 6 GLN A 219 ILE A 221 1 O GLN A 219 N ALA A 202 SHEET 1 B 2 ASP A 138 ARG A 142 0 SHEET 2 B 2 ARG A 145 GLU A 151 -1 O GLU A 151 N ASP A 138 SHEET 1 C 6 HIS B 133 ALA B 136 0 SHEET 2 C 6 LEU B 110 THR B 115 1 N LEU B 113 O ILE B 135 SHEET 3 C 6 ARG B 5 PHE B 9 1 N ALA B 7 O LEU B 110 SHEET 4 C 6 GLU B 180 SER B 185 1 O TYR B 182 N LEU B 6 SHEET 5 C 6 ARG B 199 ALA B 203 1 O ILE B 201 N PHE B 183 SHEET 6 C 6 GLN B 219 ILE B 221 1 O ILE B 221 N ALA B 202 SHEET 1 D 2 ASP B 138 ARG B 142 0 SHEET 2 D 2 ARG B 145 GLU B 151 -1 O GLU B 151 N ASP B 138 SITE 1 AC1 9 ASP A 10 LEU A 11 ASP A 12 THR A 115 SITE 2 AC1 9 ALA A 116 THR A 117 LYS A 160 HOH A 300 SITE 3 AC1 9 HOH A 316 SITE 1 AC2 8 ASP B 10 LEU B 11 ASP B 12 THR B 115 SITE 2 AC2 8 ALA B 116 THR B 117 LYS B 160 HOH B 285 CRYST1 86.398 86.398 219.276 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011574 0.006682 0.000000 0.00000 SCALE2 0.000000 0.013365 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004560 0.00000