HEADER OXIDOREDUCTASE 16-JAN-09 3FW1 TITLE QUINONE REDUCTASE 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBOSYLDIHYDRONICOTINAMIDE DEHYDROGENASE [QUINONE]; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: NRH DEHYDROGENASE [QUINONE] 2, NRH:QUINONE OXIDOREDUCTASE 2, COMPND 5 QUINONE REDUCTASE 2, QR2; COMPND 6 EC: 1.10.99.2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NMOR2, NQO2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: TUNER(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETM30 KEYWDS OXIDOREDUCTASE, FLAVOPROTEIN, METALLOPROTEIN, IMATINIB COMPLEX, KEYWDS 2 CYTOPLASM, FAD, METAL-BINDING, PHOSPHOPROTEIN, POLYMORPHISM, ZINC EXPDTA X-RAY DIFFRACTION AUTHOR J.A.WINGER,O.HANTSCHEL,G.SUPERTI-FURGA,J.KURIYAN REVDAT 2 06-SEP-23 3FW1 1 REMARK SEQADV HETSYN REVDAT 1 10-MAR-09 3FW1 0 JRNL AUTH J.A.WINGER,O.HANTSCHEL,G.SUPERTI-FURGA,J.KURIYAN JRNL TITL THE STRUCTURE OF THE LEUKEMIA DRUG IMATINIB BOUND TO HUMAN JRNL TITL 2 QUINONE REDUCTASE 2 (NQO2). JRNL REF BMC STRUCT.BIOL. V. 9 7 2009 JRNL REFN ESSN 1472-6807 JRNL PMID 19236722 JRNL DOI 10.1186/1472-6807-9-7 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.86 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 27265 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.152 REMARK 3 R VALUE (WORKING SET) : 0.150 REMARK 3 FREE R VALUE : 0.182 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 1395 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.8692 - 3.7685 1.00 2761 138 0.1529 0.1795 REMARK 3 2 3.7685 - 2.9919 1.00 2638 136 0.1255 0.1386 REMARK 3 3 2.9919 - 2.6139 1.00 2576 146 0.1320 0.1719 REMARK 3 4 2.6139 - 2.3750 1.00 2590 130 0.1310 0.1684 REMARK 3 5 2.3750 - 2.2048 1.00 2569 142 0.1363 0.1811 REMARK 3 6 2.2048 - 2.0748 1.00 2551 150 0.1418 0.1817 REMARK 3 7 2.0748 - 1.9709 1.00 2559 126 0.1542 0.1875 REMARK 3 8 1.9709 - 1.8852 1.00 2552 135 0.1708 0.2087 REMARK 3 9 1.8852 - 1.8126 1.00 2536 134 0.1967 0.2268 REMARK 3 10 1.8126 - 1.7501 1.00 2538 158 0.2126 0.2486 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 52.29 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.990 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.11 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.83000 REMARK 3 B22 (A**2) : -0.83000 REMARK 3 B33 (A**2) : 1.40700 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 3906 REMARK 3 ANGLE : 1.093 7052 REMARK 3 CHIRALITY : 0.102 288 REMARK 3 PLANARITY : 0.006 584 REMARK 3 DIHEDRAL : 21.070 973 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 2:60) REMARK 3 ORIGIN FOR THE GROUP (A): 27.0860 25.5405 11.4777 REMARK 3 T TENSOR REMARK 3 T11: 0.2056 T22: 0.1253 REMARK 3 T33: 0.1668 T12: -0.0844 REMARK 3 T13: -0.0639 T23: 0.0281 REMARK 3 L TENSOR REMARK 3 L11: 1.0300 L22: 0.7710 REMARK 3 L33: 0.8076 L12: 0.6223 REMARK 3 L13: 1.4113 L23: 0.2573 REMARK 3 S TENSOR REMARK 3 S11: -0.2816 S12: 0.2621 S13: 0.1431 REMARK 3 S21: -0.2922 S22: 0.1216 S23: 0.1853 REMARK 3 S31: -0.2367 S32: 0.2517 S33: 0.1286 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 61:78) REMARK 3 ORIGIN FOR THE GROUP (A): 10.0807 11.4364 25.1805 REMARK 3 T TENSOR REMARK 3 T11: 0.1247 T22: 0.1561 REMARK 3 T33: 0.2287 T12: -0.0103 REMARK 3 T13: -0.0468 T23: -0.0386 REMARK 3 L TENSOR REMARK 3 L11: 0.6212 L22: 0.1817 REMARK 3 L33: 2.4179 L12: 0.2844 REMARK 3 L13: 1.2445 L23: 0.2837 REMARK 3 S TENSOR REMARK 3 S11: 0.0777 S12: -0.1374 S13: 0.0046 REMARK 3 S21: -0.0513 S22: -0.0530 S23: 0.1405 REMARK 3 S31: 0.1695 S32: -0.3489 S33: -0.0023 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 79:152) REMARK 3 ORIGIN FOR THE GROUP (A): 26.8964 15.7423 15.7479 REMARK 3 T TENSOR REMARK 3 T11: 0.1315 T22: 0.1138 REMARK 3 T33: 0.1051 T12: -0.0265 REMARK 3 T13: -0.0204 T23: 0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.6690 L22: 0.9655 REMARK 3 L33: 0.6360 L12: 0.5743 REMARK 3 L13: 0.5656 L23: 0.5667 REMARK 3 S TENSOR REMARK 3 S11: -0.1345 S12: 0.1034 S13: 0.0390 REMARK 3 S21: -0.1876 S22: 0.1376 S23: 0.1021 REMARK 3 S31: -0.0584 S32: 0.0955 S33: -0.0110 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 153:162) REMARK 3 ORIGIN FOR THE GROUP (A): 51.7979 16.9563 24.8825 REMARK 3 T TENSOR REMARK 3 T11: 0.1002 T22: 0.2205 REMARK 3 T33: 0.3239 T12: 0.0443 REMARK 3 T13: -0.0063 T23: -0.1385 REMARK 3 L TENSOR REMARK 3 L11: -0.0991 L22: 1.5156 REMARK 3 L33: 0.0836 L12: 0.7060 REMARK 3 L13: 0.6402 L23: 0.3850 REMARK 3 S TENSOR REMARK 3 S11: 0.0465 S12: 0.2549 S13: -0.1690 REMARK 3 S21: -0.0659 S22: 0.3655 S23: -0.9631 REMARK 3 S31: 0.0609 S32: 0.4326 S33: -0.4287 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 163:229) REMARK 3 ORIGIN FOR THE GROUP (A): 41.2730 15.3954 12.4810 REMARK 3 T TENSOR REMARK 3 T11: 0.1635 T22: 0.3184 REMARK 3 T33: 0.1525 T12: -0.0901 REMARK 3 T13: 0.0489 T23: -0.1136 REMARK 3 L TENSOR REMARK 3 L11: 1.4348 L22: 1.0591 REMARK 3 L33: 0.8802 L12: 0.7925 REMARK 3 L13: 1.1309 L23: 1.2462 REMARK 3 S TENSOR REMARK 3 S11: -0.1917 S12: 0.5697 S13: -0.2849 REMARK 3 S21: -0.2755 S22: 0.4597 S23: -0.3219 REMARK 3 S31: -0.1750 S32: 0.5241 S33: -0.2530 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3FW1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JAN-09. REMARK 100 THE DEPOSITION ID IS D_1000051112. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUL-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.2547 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM Q315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.25 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27265 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 31.864 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.200 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : 0.08300 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.30 REMARK 200 R MERGE FOR SHELL (I) : 0.55900 REMARK 200 R SYM FOR SHELL (I) : 0.55900 REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1QR2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES PH 6.0-6.2, 0.015 MM FAD, REMARK 280 62% MPD, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K, PH 6.2 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 50.16850 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 50.16850 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 52.42900 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 50.16850 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 50.16850 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 52.42900 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 50.16850 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 50.16850 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 52.42900 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 50.16850 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 50.16850 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 52.42900 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 50.16850 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 50.16850 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 52.42900 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 50.16850 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 50.16850 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 52.42900 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 50.16850 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 50.16850 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 52.42900 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 50.16850 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 50.16850 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 52.42900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -67.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 50.16850 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 50.16850 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 52.42900 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 241 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 338 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 373 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 439 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 ALA A -1 REMARK 465 MET A 0 REMARK 465 ALA A 1 REMARK 465 GLN A 230 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 132 -126.41 49.98 REMARK 500 TYR A 155 52.98 -96.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 231 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 173 ND1 REMARK 620 2 HIS A 177 ND1 103.1 REMARK 620 3 CYS A 222 O 101.0 96.7 REMARK 620 4 CYS A 222 SG 131.2 119.6 96.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 231 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 232 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE STI A 233 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD A 234 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD A 235 DBREF 3FW1 A 0 230 UNP P16083 NQO2_HUMAN 1 231 SEQADV 3FW1 GLY A -2 UNP P16083 EXPRESSION TAG SEQADV 3FW1 ALA A -1 UNP P16083 EXPRESSION TAG SEQRES 1 A 233 GLY ALA MET ALA GLY LYS LYS VAL LEU ILE VAL TYR ALA SEQRES 2 A 233 HIS GLN GLU PRO LYS SER PHE ASN GLY SER LEU LYS ASN SEQRES 3 A 233 VAL ALA VAL ASP GLU LEU SER ARG GLN GLY CYS THR VAL SEQRES 4 A 233 THR VAL SER ASP LEU TYR ALA MET ASN PHE GLU PRO ARG SEQRES 5 A 233 ALA THR ASP LYS ASP ILE THR GLY THR LEU SER ASN PRO SEQRES 6 A 233 GLU VAL PHE ASN TYR GLY VAL GLU THR HIS GLU ALA TYR SEQRES 7 A 233 LYS GLN ARG SER LEU ALA SER ASP ILE THR ASP GLU GLN SEQRES 8 A 233 LYS LYS VAL ARG GLU ALA ASP LEU VAL ILE PHE GLN PHE SEQRES 9 A 233 PRO LEU TYR TRP PHE SER VAL PRO ALA ILE LEU LYS GLY SEQRES 10 A 233 TRP MET ASP ARG VAL LEU CYS GLN GLY PHE ALA PHE ASP SEQRES 11 A 233 ILE PRO GLY PHE TYR ASP SER GLY LEU LEU GLN GLY LYS SEQRES 12 A 233 LEU ALA LEU LEU SER VAL THR THR GLY GLY THR ALA GLU SEQRES 13 A 233 MET TYR THR LYS THR GLY VAL ASN GLY ASP SER ARG TYR SEQRES 14 A 233 PHE LEU TRP PRO LEU GLN HIS GLY THR LEU HIS PHE CYS SEQRES 15 A 233 GLY PHE LYS VAL LEU ALA PRO GLN ILE SER PHE ALA PRO SEQRES 16 A 233 GLU ILE ALA SER GLU GLU GLU ARG LYS GLY MET VAL ALA SEQRES 17 A 233 ALA TRP SER GLN ARG LEU GLN THR ILE TRP LYS GLU GLU SEQRES 18 A 233 PRO ILE PRO CYS THR ALA HIS TRP HIS PHE GLY GLN HET ZN A 231 1 HET FAD A 232 84 HET STI A 233 68 HET MRD A 234 22 HET MRD A 235 22 HETNAM ZN ZINC ION HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM STI 4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4- HETNAM 2 STI PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE HETNAM MRD (4R)-2-METHYLPENTANE-2,4-DIOL HETSYN STI STI-571; IMATINIB FORMUL 2 ZN ZN 2+ FORMUL 3 FAD C27 H33 N9 O15 P2 FORMUL 4 STI C29 H31 N7 O FORMUL 5 MRD 2(C6 H14 O2) FORMUL 7 HOH *213(H2 O) HELIX 1 1 SER A 16 GLN A 32 1 17 HELIX 2 2 THR A 51 ILE A 55 5 5 HELIX 3 3 ASN A 66 GLN A 77 1 12 HELIX 4 4 ALA A 81 ALA A 94 1 14 HELIX 5 5 PRO A 109 LEU A 120 1 12 HELIX 6 6 PHE A 131 GLY A 135 5 5 HELIX 7 7 ASP A 163 HIS A 173 1 11 HELIX 8 8 ALA A 191 ALA A 195 5 5 HELIX 9 9 SER A 196 GLN A 212 1 17 HELIX 10 10 THR A 213 GLU A 217 5 5 HELIX 11 11 THR A 223 GLY A 229 1 7 SHEET 1 A 5 THR A 35 ASP A 40 0 SHEET 2 A 5 LYS A 4 TYR A 9 1 N VAL A 5 O THR A 35 SHEET 3 A 5 LEU A 96 PRO A 102 1 O ILE A 98 N VAL A 8 SHEET 4 A 5 LEU A 141 THR A 147 1 O SER A 145 N PHE A 99 SHEET 5 A 5 LYS A 182 VAL A 183 1 O LYS A 182 N ALA A 142 SHEET 1 B 5 THR A 35 ASP A 40 0 SHEET 2 B 5 LYS A 4 TYR A 9 1 N VAL A 5 O THR A 35 SHEET 3 B 5 LEU A 96 PRO A 102 1 O ILE A 98 N VAL A 8 SHEET 4 B 5 LEU A 141 THR A 147 1 O SER A 145 N PHE A 99 SHEET 5 B 5 GLN A 187 SER A 189 1 O SER A 189 N VAL A 146 LINK ND1 HIS A 173 ZN ZN A 231 1555 1555 2.30 LINK ND1 HIS A 177 ZN ZN A 231 1555 1555 2.21 LINK O ACYS A 222 ZN ZN A 231 1555 1555 2.15 LINK SG ACYS A 222 ZN ZN A 231 1555 1555 2.21 CISPEP 1 ILE A 128 PRO A 129 0 3.80 SITE 1 AC1 3 HIS A 173 HIS A 177 CYS A 222 SITE 1 AC2 30 HIS A 11 LYS A 15 SER A 16 PHE A 17 SITE 2 AC2 30 ASN A 18 SER A 20 VAL A 64 ASN A 66 SITE 3 AC2 30 PRO A 102 LEU A 103 TYR A 104 TRP A 105 SITE 4 AC2 30 PHE A 106 ASP A 117 THR A 147 THR A 148 SITE 5 AC2 30 GLY A 149 GLY A 150 TYR A 155 GLU A 193 SITE 6 AC2 30 GLU A 197 ARG A 200 VAL A 204 STI A 233 SITE 7 AC2 30 HOH A 281 HOH A 289 HOH A 304 HOH A 367 SITE 8 AC2 30 HOH A 382 HOH A 418 SITE 1 AC3 17 ASP A 52 ILE A 55 GLY A 57 LEU A 59 SITE 2 AC3 17 TRP A 105 PHE A 106 PHE A 126 GLY A 149 SITE 3 AC3 17 MET A 154 GLY A 174 PHE A 178 GLU A 193 SITE 4 AC3 17 FAD A 232 HOH A 248 HOH A 255 HOH A 433 SITE 5 AC3 17 HOH A 435 SITE 1 AC4 5 TYR A 75 ARG A 92 GLY A 123 PHE A 124 SITE 2 AC4 5 LEU A 137 SITE 1 AC5 8 GLN A 77 SER A 79 ASP A 127 ILE A 128 SITE 2 AC5 8 PRO A 129 HOH A 316 HOH A 345 HOH A 379 CRYST1 100.337 100.337 104.858 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009966 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009966 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009537 0.00000