data_3FY5 # _entry.id 3FY5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3FY5 RCSB RCSB051184 WWPDB D_1000051184 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3FY5 _pdbx_database_status.recvd_initial_deposition_date 2009-01-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Earnest, T.' 1 'Friedland, N.' 2 'Hung, L.-W.' 3 'Moon, R.' 4 # _cell.entry_id 3FY5 _cell.length_a 96.198 _cell.length_b 96.198 _cell.length_c 93.557 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3FY5 _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Segment polarity protein dishevelled homolog DVL-2' 10109.761 2 ? ? ? ? 2 water nat water 18.015 29 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Dishevelled-2, DSH homolog 2, Xdsh' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)TVTLN(MSE)EKYNFLGISIVGQSNERGDGGIYIGSI(MSE)KGGAVAADGRIEPGD(MSE)LLQVNDINFEN (MSE)SNDDAVRVLRDIVHKPGPIVLTVAKCWD ; _entity_poly.pdbx_seq_one_letter_code_can ;MTVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDIVHKPG PIVLTVAKCWD ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 THR n 1 3 VAL n 1 4 THR n 1 5 LEU n 1 6 ASN n 1 7 MSE n 1 8 GLU n 1 9 LYS n 1 10 TYR n 1 11 ASN n 1 12 PHE n 1 13 LEU n 1 14 GLY n 1 15 ILE n 1 16 SER n 1 17 ILE n 1 18 VAL n 1 19 GLY n 1 20 GLN n 1 21 SER n 1 22 ASN n 1 23 GLU n 1 24 ARG n 1 25 GLY n 1 26 ASP n 1 27 GLY n 1 28 GLY n 1 29 ILE n 1 30 TYR n 1 31 ILE n 1 32 GLY n 1 33 SER n 1 34 ILE n 1 35 MSE n 1 36 LYS n 1 37 GLY n 1 38 GLY n 1 39 ALA n 1 40 VAL n 1 41 ALA n 1 42 ALA n 1 43 ASP n 1 44 GLY n 1 45 ARG n 1 46 ILE n 1 47 GLU n 1 48 PRO n 1 49 GLY n 1 50 ASP n 1 51 MSE n 1 52 LEU n 1 53 LEU n 1 54 GLN n 1 55 VAL n 1 56 ASN n 1 57 ASP n 1 58 ILE n 1 59 ASN n 1 60 PHE n 1 61 GLU n 1 62 ASN n 1 63 MSE n 1 64 SER n 1 65 ASN n 1 66 ASP n 1 67 ASP n 1 68 ALA n 1 69 VAL n 1 70 ARG n 1 71 VAL n 1 72 LEU n 1 73 ARG n 1 74 ASP n 1 75 ILE n 1 76 VAL n 1 77 HIS n 1 78 LYS n 1 79 PRO n 1 80 GLY n 1 81 PRO n 1 82 ILE n 1 83 VAL n 1 84 LEU n 1 85 THR n 1 86 VAL n 1 87 ALA n 1 88 LYS n 1 89 CYS n 1 90 TRP n 1 91 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'clawed frog,common platanna,platanna' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'dsh, dvl2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Xenopus laevis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 8355 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DVL2_XENLA _struct_ref.pdbx_db_accession P51142 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDINFENMSNDDAVRVLRDIVHKPGP IVLTVAKCWD ; _struct_ref.pdbx_align_begin 254 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3FY5 A 2 ? 91 ? P51142 254 ? 343 ? 254 343 2 1 3FY5 B 2 ? 91 ? P51142 254 ? 343 ? 254 343 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3FY5 MSE A 1 ? UNP P51142 ? ? 'INITIATING METHIONINE' 253 1 2 3FY5 MSE B 1 ? UNP P51142 ? ? 'INITIATING METHIONINE' 253 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3FY5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.09 _exptl_crystal.density_percent_sol 60.20 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 5.0.2' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 5.0.2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3FY5 _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 29.2 _reflns.d_resolution_high 2.4 _reflns.number_obs 9682 _reflns.number_all 9682 _reflns.percent_possible_obs 92.52 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 3FY5 _refine.ls_number_reflns_obs 9179 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.2 _refine.ls_d_res_high 2.40 _refine.ls_percent_reflns_obs 92.53 _refine.ls_R_factor_obs .23241 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work .22933 _refine.ls_R_factor_R_free .29391 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 503 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc .937 _refine.correlation_coeff_Fo_to_Fc_free .910 _refine.B_iso_mean 47.712 _refine.aniso_B[1][1] .04 _refine.aniso_B[2][2] .04 _refine.aniso_B[3][3] -.06 _refine.aniso_B[1][2] .02 _refine.aniso_B[1][3] .00 _refine.aniso_B[2][3] .00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii .80 _refine.pdbx_solvent_shrinkage_radii .80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R .327 _refine.pdbx_overall_ESU_R_Free .277 _refine.overall_SU_ML .191 _refine.overall_SU_B 8.684 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1264 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 29 _refine_hist.number_atoms_total 1293 _refine_hist.d_res_high 2.40 _refine_hist.d_res_low 29.2 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d .021 .022 ? 1277 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.270 1.964 ? 1728 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.566 5.000 ? 173 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 45.279 25.200 ? 50 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 18.317 15.000 ? 207 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 23.725 15.000 ? 7 'X-RAY DIFFRACTION' ? r_chiral_restr .153 .200 ? 207 'X-RAY DIFFRACTION' ? r_gen_planes_refined .007 .021 ? 943 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.191 1.500 ? 855 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.223 2.000 ? 1364 'X-RAY DIFFRACTION' ? r_scbond_it 3.816 3.000 ? 422 'X-RAY DIFFRACTION' ? r_scangle_it 5.528 4.500 ? 364 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.400 _refine_ls_shell.d_res_low 2.462 _refine_ls_shell.number_reflns_R_work 641 _refine_ls_shell.R_factor_R_work .346 _refine_ls_shell.percent_reflns_obs 90.84 _refine_ls_shell.R_factor_R_free .387 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 33 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3FY5 _struct.title 'Dishevelled PDZ domain homodimer' _struct.pdbx_descriptor 'Segment polarity protein dishevelled homolog DVL-2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3FY5 _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text ;PDZ, dishevelled, cell polarity, Cell membrane, Cell projection, Cilium, Cilium biogenesis/degradation, Cytoplasm, Cytoplasmic vesicle, Developmental protein, Gastrulation, Membrane, Nucleus, Phosphoprotein, Wnt signaling pathway, PROTEIN BINDING ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 38 ? GLY A 44 ? GLY A 290 GLY A 296 1 ? 7 HELX_P HELX_P2 2 SER A 64 ? LYS A 78 ? SER A 316 LYS A 330 1 ? 15 HELX_P HELX_P3 3 GLY B 38 ? ASP B 43 ? GLY B 290 ASP B 295 1 ? 6 HELX_P HELX_P4 4 SER B 64 ? HIS B 77 ? SER B 316 HIS B 329 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A MSE 1 C ? ? ? 1_555 A THR 2 N ? ? A MSE 253 A THR 254 1_555 ? ? ? ? ? ? ? 1.332 ? covale2 covale ? ? A ASN 6 C ? ? ? 1_555 A MSE 7 N ? ? A ASN 258 A MSE 259 1_555 ? ? ? ? ? ? ? 1.330 ? covale3 covale ? ? A MSE 7 C ? ? ? 1_555 A GLU 8 N ? ? A MSE 259 A GLU 260 1_555 ? ? ? ? ? ? ? 1.337 ? covale4 covale ? ? A ILE 34 C ? ? ? 1_555 A MSE 35 N ? ? A ILE 286 A MSE 287 1_555 ? ? ? ? ? ? ? 1.329 ? covale5 covale ? ? A MSE 35 C ? ? ? 1_555 A LYS 36 N ? ? A MSE 287 A LYS 288 1_555 ? ? ? ? ? ? ? 1.346 ? covale6 covale ? ? A ASP 50 C ? ? ? 1_555 A MSE 51 N ? ? A ASP 302 A MSE 303 1_555 ? ? ? ? ? ? ? 1.315 ? covale7 covale ? ? A MSE 51 C ? ? ? 1_555 A LEU 52 N ? ? A MSE 303 A LEU 304 1_555 ? ? ? ? ? ? ? 1.333 ? covale8 covale ? ? A ASN 62 C ? ? ? 1_555 A MSE 63 N ? ? A ASN 314 A MSE 315 1_555 ? ? ? ? ? ? ? 1.309 ? covale9 covale ? ? A MSE 63 C ? ? ? 1_555 A SER 64 N ? ? A MSE 315 A SER 316 1_555 ? ? ? ? ? ? ? 1.345 ? covale10 covale ? ? B MSE 1 C ? ? ? 1_555 B THR 2 N ? ? B MSE 253 B THR 254 1_555 ? ? ? ? ? ? ? 1.314 ? covale11 covale ? ? B ASN 6 C ? ? ? 1_555 B MSE 7 N ? ? B ASN 258 B MSE 259 1_555 ? ? ? ? ? ? ? 1.323 ? covale12 covale ? ? B MSE 7 C ? ? ? 1_555 B GLU 8 N ? ? B MSE 259 B GLU 260 1_555 ? ? ? ? ? ? ? 1.329 ? covale13 covale ? ? B ILE 34 C ? ? ? 1_555 B MSE 35 N ? ? B ILE 286 B MSE 287 1_555 ? ? ? ? ? ? ? 1.303 ? covale14 covale ? ? B MSE 35 C ? ? ? 1_555 B LYS 36 N ? ? B MSE 287 B LYS 288 1_555 ? ? ? ? ? ? ? 1.333 ? covale15 covale ? ? B ASP 50 C ? ? ? 1_555 B MSE 51 N ? ? B ASP 302 B MSE 303 1_555 ? ? ? ? ? ? ? 1.320 ? covale16 covale ? ? B MSE 51 C ? ? ? 1_555 B LEU 52 N ? ? B MSE 303 B LEU 304 1_555 ? ? ? ? ? ? ? 1.336 ? covale17 covale ? ? B ASN 62 C ? ? ? 1_555 B MSE 63 N ? ? B ASN 314 B MSE 315 1_555 ? ? ? ? ? ? ? 1.309 ? covale18 covale ? ? B MSE 63 C ? ? ? 1_555 B SER 64 N ? ? B MSE 315 B SER 316 1_555 ? ? ? ? ? ? ? 1.320 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 2 ? LEU A 5 ? THR A 254 LEU A 257 A 2 ILE A 82 ? ALA A 87 ? ILE A 334 ALA A 339 A 3 MSE A 51 ? VAL A 55 ? MSE A 303 VAL A 307 A 4 ILE A 58 ? ASN A 59 ? ILE A 310 ASN A 311 B 1 GLY A 27 ? ILE A 34 ? GLY A 279 ILE A 286 B 2 ILE A 15 ? ASN A 22 ? ILE A 267 ASN A 274 B 3 ILE B 15 ? GLN B 20 ? ILE B 267 GLN B 272 B 4 GLY B 28 ? ILE B 34 ? GLY B 280 ILE B 286 C 1 THR B 2 ? LEU B 5 ? THR B 254 LEU B 257 C 2 ILE B 82 ? ALA B 87 ? ILE B 334 ALA B 339 C 3 MSE B 51 ? VAL B 55 ? MSE B 303 VAL B 307 C 4 ILE B 58 ? ASN B 59 ? ILE B 310 ASN B 311 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 5 ? N LEU A 257 O ILE A 82 ? O ILE A 334 A 2 3 O THR A 85 ? O THR A 337 N GLN A 54 ? N GLN A 306 A 3 4 N VAL A 55 ? N VAL A 307 O ILE A 58 ? O ILE A 310 B 1 2 O GLY A 32 ? O GLY A 284 N SER A 16 ? N SER A 268 B 2 3 N GLY A 19 ? N GLY A 271 O GLY B 19 ? O GLY B 271 B 3 4 N VAL B 18 ? N VAL B 270 O TYR B 30 ? O TYR B 282 C 1 2 N LEU B 5 ? N LEU B 257 O ILE B 82 ? O ILE B 334 C 2 3 O ALA B 87 ? O ALA B 339 N MSE B 51 ? N MSE B 303 C 3 4 N VAL B 55 ? N VAL B 307 O ILE B 58 ? O ILE B 310 # _database_PDB_matrix.entry_id 3FY5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3FY5 _atom_sites.fract_transf_matrix[1][1] .010395 _atom_sites.fract_transf_matrix[1][2] .006002 _atom_sites.fract_transf_matrix[1][3] .000000 _atom_sites.fract_transf_matrix[2][1] .000000 _atom_sites.fract_transf_matrix[2][2] .012003 _atom_sites.fract_transf_matrix[2][3] .000000 _atom_sites.fract_transf_matrix[3][1] .000000 _atom_sites.fract_transf_matrix[3][2] .000000 _atom_sites.fract_transf_matrix[3][3] .010689 _atom_sites.fract_transf_vector[1] .00000 _atom_sites.fract_transf_vector[2] .00000 _atom_sites.fract_transf_vector[3] .00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 253 253 MSE MSE A . n A 1 2 THR 2 254 254 THR THR A . n A 1 3 VAL 3 255 255 VAL VAL A . n A 1 4 THR 4 256 256 THR THR A . n A 1 5 LEU 5 257 257 LEU LEU A . n A 1 6 ASN 6 258 258 ASN ASN A . n A 1 7 MSE 7 259 259 MSE MSE A . n A 1 8 GLU 8 260 260 GLU GLU A . n A 1 9 LYS 9 261 261 LYS LYS A . n A 1 10 TYR 10 262 262 TYR TYR A . n A 1 11 ASN 11 263 263 ASN ASN A . n A 1 12 PHE 12 264 264 PHE PHE A . n A 1 13 LEU 13 265 265 LEU LEU A . n A 1 14 GLY 14 266 266 GLY GLY A . n A 1 15 ILE 15 267 267 ILE ILE A . n A 1 16 SER 16 268 268 SER SER A . n A 1 17 ILE 17 269 269 ILE ILE A . n A 1 18 VAL 18 270 270 VAL VAL A . n A 1 19 GLY 19 271 271 GLY GLY A . n A 1 20 GLN 20 272 272 GLN GLN A . n A 1 21 SER 21 273 273 SER SER A . n A 1 22 ASN 22 274 274 ASN ASN A . n A 1 23 GLU 23 275 275 GLU GLU A . n A 1 24 ARG 24 276 276 ARG ARG A . n A 1 25 GLY 25 277 277 GLY GLY A . n A 1 26 ASP 26 278 278 ASP ASP A . n A 1 27 GLY 27 279 279 GLY GLY A . n A 1 28 GLY 28 280 280 GLY GLY A . n A 1 29 ILE 29 281 281 ILE ILE A . n A 1 30 TYR 30 282 282 TYR TYR A . n A 1 31 ILE 31 283 283 ILE ILE A . n A 1 32 GLY 32 284 284 GLY GLY A . n A 1 33 SER 33 285 285 SER SER A . n A 1 34 ILE 34 286 286 ILE ILE A . n A 1 35 MSE 35 287 287 MSE MSE A . n A 1 36 LYS 36 288 288 LYS LYS A . n A 1 37 GLY 37 289 289 GLY GLY A . n A 1 38 GLY 38 290 290 GLY GLY A . n A 1 39 ALA 39 291 291 ALA ALA A . n A 1 40 VAL 40 292 292 VAL VAL A . n A 1 41 ALA 41 293 293 ALA ALA A . n A 1 42 ALA 42 294 294 ALA ALA A . n A 1 43 ASP 43 295 295 ASP ASP A . n A 1 44 GLY 44 296 296 GLY GLY A . n A 1 45 ARG 45 297 297 ARG ARG A . n A 1 46 ILE 46 298 298 ILE ILE A . n A 1 47 GLU 47 299 299 GLU GLU A . n A 1 48 PRO 48 300 300 PRO PRO A . n A 1 49 GLY 49 301 301 GLY GLY A . n A 1 50 ASP 50 302 302 ASP ASP A . n A 1 51 MSE 51 303 303 MSE MSE A . n A 1 52 LEU 52 304 304 LEU LEU A . n A 1 53 LEU 53 305 305 LEU LEU A . n A 1 54 GLN 54 306 306 GLN GLN A . n A 1 55 VAL 55 307 307 VAL VAL A . n A 1 56 ASN 56 308 308 ASN ASN A . n A 1 57 ASP 57 309 309 ASP ASP A . n A 1 58 ILE 58 310 310 ILE ILE A . n A 1 59 ASN 59 311 311 ASN ASN A . n A 1 60 PHE 60 312 312 PHE PHE A . n A 1 61 GLU 61 313 313 GLU GLU A . n A 1 62 ASN 62 314 314 ASN ASN A . n A 1 63 MSE 63 315 315 MSE MSE A . n A 1 64 SER 64 316 316 SER SER A . n A 1 65 ASN 65 317 317 ASN ASN A . n A 1 66 ASP 66 318 318 ASP ASP A . n A 1 67 ASP 67 319 319 ASP ASP A . n A 1 68 ALA 68 320 320 ALA ALA A . n A 1 69 VAL 69 321 321 VAL VAL A . n A 1 70 ARG 70 322 322 ARG ARG A . n A 1 71 VAL 71 323 323 VAL VAL A . n A 1 72 LEU 72 324 324 LEU LEU A . n A 1 73 ARG 73 325 325 ARG ARG A . n A 1 74 ASP 74 326 326 ASP ASP A . n A 1 75 ILE 75 327 327 ILE ILE A . n A 1 76 VAL 76 328 328 VAL VAL A . n A 1 77 HIS 77 329 329 HIS HIS A . n A 1 78 LYS 78 330 330 LYS LYS A . n A 1 79 PRO 79 331 331 PRO PRO A . n A 1 80 GLY 80 332 332 GLY GLY A . n A 1 81 PRO 81 333 333 PRO PRO A . n A 1 82 ILE 82 334 334 ILE ILE A . n A 1 83 VAL 83 335 335 VAL VAL A . n A 1 84 LEU 84 336 336 LEU LEU A . n A 1 85 THR 85 337 337 THR THR A . n A 1 86 VAL 86 338 338 VAL VAL A . n A 1 87 ALA 87 339 339 ALA ALA A . n A 1 88 LYS 88 340 340 LYS LYS A . n A 1 89 CYS 89 341 341 CYS CYS A . n A 1 90 TRP 90 342 342 TRP TRP A . n A 1 91 ASP 91 343 343 ASP ALA A . n B 1 1 MSE 1 253 253 MSE MSE B . n B 1 2 THR 2 254 254 THR THR B . n B 1 3 VAL 3 255 255 VAL VAL B . n B 1 4 THR 4 256 256 THR THR B . n B 1 5 LEU 5 257 257 LEU LEU B . n B 1 6 ASN 6 258 258 ASN ASN B . n B 1 7 MSE 7 259 259 MSE MSE B . n B 1 8 GLU 8 260 260 GLU GLU B . n B 1 9 LYS 9 261 261 LYS LYS B . n B 1 10 TYR 10 262 262 TYR TYR B . n B 1 11 ASN 11 263 263 ASN ASN B . n B 1 12 PHE 12 264 264 PHE PHE B . n B 1 13 LEU 13 265 265 LEU LEU B . n B 1 14 GLY 14 266 266 GLY GLY B . n B 1 15 ILE 15 267 267 ILE ILE B . n B 1 16 SER 16 268 268 SER SER B . n B 1 17 ILE 17 269 269 ILE ILE B . n B 1 18 VAL 18 270 270 VAL VAL B . n B 1 19 GLY 19 271 271 GLY GLY B . n B 1 20 GLN 20 272 272 GLN GLN B . n B 1 21 SER 21 273 273 SER SER B . n B 1 22 ASN 22 274 274 ASN ASN B . n B 1 23 GLU 23 275 ? ? ? B . n B 1 24 ARG 24 276 ? ? ? B . n B 1 25 GLY 25 277 ? ? ? B . n B 1 26 ASP 26 278 ? ? ? B . n B 1 27 GLY 27 279 279 GLY GLY B . n B 1 28 GLY 28 280 280 GLY GLY B . n B 1 29 ILE 29 281 281 ILE ILE B . n B 1 30 TYR 30 282 282 TYR TYR B . n B 1 31 ILE 31 283 283 ILE ILE B . n B 1 32 GLY 32 284 284 GLY GLY B . n B 1 33 SER 33 285 285 SER SER B . n B 1 34 ILE 34 286 286 ILE ILE B . n B 1 35 MSE 35 287 287 MSE MSE B . n B 1 36 LYS 36 288 288 LYS LYS B . n B 1 37 GLY 37 289 289 GLY GLY B . n B 1 38 GLY 38 290 290 GLY GLY B . n B 1 39 ALA 39 291 291 ALA ALA B . n B 1 40 VAL 40 292 292 VAL VAL B . n B 1 41 ALA 41 293 293 ALA ALA B . n B 1 42 ALA 42 294 294 ALA ALA B . n B 1 43 ASP 43 295 295 ASP ASP B . n B 1 44 GLY 44 296 296 GLY GLY B . n B 1 45 ARG 45 297 297 ARG ARG B . n B 1 46 ILE 46 298 298 ILE ILE B . n B 1 47 GLU 47 299 299 GLU GLU B . n B 1 48 PRO 48 300 300 PRO PRO B . n B 1 49 GLY 49 301 301 GLY GLY B . n B 1 50 ASP 50 302 302 ASP ASP B . n B 1 51 MSE 51 303 303 MSE MSE B . n B 1 52 LEU 52 304 304 LEU LEU B . n B 1 53 LEU 53 305 305 LEU LEU B . n B 1 54 GLN 54 306 306 GLN GLN B . n B 1 55 VAL 55 307 307 VAL VAL B . n B 1 56 ASN 56 308 308 ASN ASN B . n B 1 57 ASP 57 309 309 ASP ASP B . n B 1 58 ILE 58 310 310 ILE ILE B . n B 1 59 ASN 59 311 311 ASN ASN B . n B 1 60 PHE 60 312 312 PHE PHE B . n B 1 61 GLU 61 313 313 GLU GLU B . n B 1 62 ASN 62 314 314 ASN ASN B . n B 1 63 MSE 63 315 315 MSE MSE B . n B 1 64 SER 64 316 316 SER SER B . n B 1 65 ASN 65 317 317 ASN ASN B . n B 1 66 ASP 66 318 318 ASP ASP B . n B 1 67 ASP 67 319 319 ASP ASP B . n B 1 68 ALA 68 320 320 ALA ALA B . n B 1 69 VAL 69 321 321 VAL VAL B . n B 1 70 ARG 70 322 322 ARG ARG B . n B 1 71 VAL 71 323 323 VAL VAL B . n B 1 72 LEU 72 324 324 LEU LEU B . n B 1 73 ARG 73 325 325 ARG ARG B . n B 1 74 ASP 74 326 326 ASP ASP B . n B 1 75 ILE 75 327 327 ILE ILE B . n B 1 76 VAL 76 328 328 VAL VAL B . n B 1 77 HIS 77 329 329 HIS HIS B . n B 1 78 LYS 78 330 330 LYS LYS B . n B 1 79 PRO 79 331 331 PRO PRO B . n B 1 80 GLY 80 332 332 GLY GLY B . n B 1 81 PRO 81 333 333 PRO PRO B . n B 1 82 ILE 82 334 334 ILE ILE B . n B 1 83 VAL 83 335 335 VAL VAL B . n B 1 84 LEU 84 336 336 LEU LEU B . n B 1 85 THR 85 337 337 THR THR B . n B 1 86 VAL 86 338 338 VAL VAL B . n B 1 87 ALA 87 339 339 ALA ALA B . n B 1 88 LYS 88 340 340 LYS LYS B . n B 1 89 CYS 89 341 341 CYS CYS B . n B 1 90 TRP 90 342 ? ? ? B . n B 1 91 ASP 91 343 ? ? ? B . n # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 1 A MSE 253 ? MET SELENOMETHIONINE 2 A MSE 7 A MSE 259 ? MET SELENOMETHIONINE 3 A MSE 35 A MSE 287 ? MET SELENOMETHIONINE 4 A MSE 51 A MSE 303 ? MET SELENOMETHIONINE 5 A MSE 63 A MSE 315 ? MET SELENOMETHIONINE 6 B MSE 1 B MSE 253 ? MET SELENOMETHIONINE 7 B MSE 7 B MSE 259 ? MET SELENOMETHIONINE 8 B MSE 35 B MSE 287 ? MET SELENOMETHIONINE 9 B MSE 51 B MSE 303 ? MET SELENOMETHIONINE 10 B MSE 63 B MSE 315 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2 A,C 2 1,2 B,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1090 ? 1 MORE -9 ? 1 'SSA (A^2)' 9700 ? 2 'ABSA (A^2)' 1070 ? 2 MORE -7 ? 2 'SSA (A^2)' 8760 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 11_655 -x+y+1,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 96.1980000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 46.7785000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-09-08 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 SOLVE phasing . ? 2 REFMAC refinement 5.5.0066 ? 3 HKL-2000 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OH _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 TYR _pdbx_validate_close_contact.auth_seq_id_1 282 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 CE _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 MSE _pdbx_validate_close_contact.auth_seq_id_2 303 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 SG _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 CYS _pdbx_validate_symm_contact.auth_seq_id_1 341 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 SG _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 CYS _pdbx_validate_symm_contact.auth_seq_id_2 341 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 10_665 _pdbx_validate_symm_contact.dist 2.18 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C A LYS 330 ? ? N A PRO 331 ? ? CA A PRO 331 ? ? 109.77 119.30 -9.53 1.50 Y 2 1 CB B MSE 287 ? ? CG B MSE 287 ? ? SE B MSE 287 ? ? 94.10 112.70 -18.60 3.00 N 3 1 CB B ASN 308 ? ? CA B ASN 308 ? ? C B ASN 308 ? ? 97.68 110.40 -12.72 2.00 N 4 1 NE B ARG 322 ? ? CZ B ARG 322 ? ? NH1 B ARG 322 ? ? 116.69 120.30 -3.61 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MSE A 259 ? ? 74.16 -37.79 2 1 TYR A 262 ? ? -125.02 -53.57 3 1 ASN A 263 ? ? 95.03 -58.22 4 1 LYS A 288 ? ? -68.76 85.69 5 1 TYR B 262 ? ? -133.90 -49.96 6 1 ASN B 263 ? ? 75.24 -29.84 7 1 ASN B 308 ? ? 29.79 63.14 8 1 ASP B 309 ? ? 91.19 -21.22 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 260 ? OE1 ? A GLU 8 OE1 2 1 Y 1 A GLU 260 ? OE2 ? A GLU 8 OE2 3 1 Y 1 A LYS 261 ? CG ? A LYS 9 CG 4 1 Y 1 A LYS 261 ? CD ? A LYS 9 CD 5 1 Y 1 A LYS 261 ? CE ? A LYS 9 CE 6 1 Y 1 A LYS 261 ? NZ ? A LYS 9 NZ 7 1 Y 1 A TYR 262 ? CE1 ? A TYR 10 CE1 8 1 Y 1 A TYR 262 ? CE2 ? A TYR 10 CE2 9 1 Y 1 A TYR 262 ? CZ ? A TYR 10 CZ 10 1 Y 1 A TYR 262 ? OH ? A TYR 10 OH 11 1 Y 1 A MSE 287 ? CG ? A MSE 35 CG 12 1 Y 1 A MSE 287 ? SE ? A MSE 35 SE 13 1 Y 1 A MSE 287 ? CE ? A MSE 35 CE 14 1 Y 1 A LYS 288 ? O ? A LYS 36 O 15 1 Y 1 A LYS 288 ? CG ? A LYS 36 CG 16 1 Y 1 A LYS 288 ? CD ? A LYS 36 CD 17 1 Y 1 A LYS 288 ? CE ? A LYS 36 CE 18 1 Y 1 A LYS 288 ? NZ ? A LYS 36 NZ 19 1 Y 1 A ALA 291 ? CB ? A ALA 39 CB 20 1 Y 1 A ASP 318 ? CG ? A ASP 66 CG 21 1 Y 1 A ASP 318 ? OD1 ? A ASP 66 OD1 22 1 Y 1 A ASP 318 ? OD2 ? A ASP 66 OD2 23 1 Y 1 A LYS 330 ? NZ ? A LYS 78 NZ 24 1 Y 1 A GLY 332 ? O ? A GLY 80 O 25 1 Y 1 A LYS 340 ? NZ ? A LYS 88 NZ 26 1 Y 1 A ASP 343 ? O ? A ASP 91 O 27 1 Y 1 A ASP 343 ? CG ? A ASP 91 CG 28 1 Y 1 A ASP 343 ? OD1 ? A ASP 91 OD1 29 1 Y 1 A ASP 343 ? OD2 ? A ASP 91 OD2 30 1 Y 1 B GLU 260 ? CD ? B GLU 8 CD 31 1 Y 1 B GLU 260 ? OE1 ? B GLU 8 OE1 32 1 Y 1 B GLU 260 ? OE2 ? B GLU 8 OE2 33 1 Y 1 B LYS 261 ? CG ? B LYS 9 CG 34 1 Y 1 B LYS 261 ? CD ? B LYS 9 CD 35 1 Y 1 B LYS 261 ? CE ? B LYS 9 CE 36 1 Y 1 B LYS 261 ? NZ ? B LYS 9 NZ 37 1 Y 1 B ASN 263 ? CG ? B ASN 11 CG 38 1 Y 1 B ASN 263 ? OD1 ? B ASN 11 OD1 39 1 Y 1 B ASN 263 ? ND2 ? B ASN 11 ND2 40 1 Y 1 B GLY 279 ? N ? B GLY 27 N 41 1 Y 1 B LYS 288 ? CD ? B LYS 36 CD 42 1 Y 1 B LYS 288 ? CE ? B LYS 36 CE 43 1 Y 1 B LYS 288 ? NZ ? B LYS 36 NZ 44 1 Y 1 B ASP 295 ? O ? B ASP 43 O 45 1 Y 1 B ASP 309 ? CG ? B ASP 57 CG 46 1 Y 1 B ASP 309 ? OD1 ? B ASP 57 OD1 47 1 Y 1 B ASP 309 ? OD2 ? B ASP 57 OD2 48 1 Y 1 B HIS 329 ? CG ? B HIS 77 CG 49 1 Y 1 B HIS 329 ? ND1 ? B HIS 77 ND1 50 1 Y 1 B HIS 329 ? CD2 ? B HIS 77 CD2 51 1 Y 1 B HIS 329 ? CE1 ? B HIS 77 CE1 52 1 Y 1 B HIS 329 ? NE2 ? B HIS 77 NE2 53 1 Y 1 B LYS 330 ? NZ ? B LYS 78 NZ 54 1 Y 1 B LYS 340 ? CB ? B LYS 88 CB 55 1 Y 1 B LYS 340 ? CG ? B LYS 88 CG 56 1 Y 1 B LYS 340 ? CD ? B LYS 88 CD 57 1 Y 1 B LYS 340 ? CE ? B LYS 88 CE 58 1 Y 1 B LYS 340 ? NZ ? B LYS 88 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B GLU 275 ? B GLU 23 2 1 Y 1 B ARG 276 ? B ARG 24 3 1 Y 1 B GLY 277 ? B GLY 25 4 1 Y 1 B ASP 278 ? B ASP 26 5 1 Y 1 B TRP 342 ? B TRP 90 6 1 Y 1 B ASP 343 ? B ASP 91 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 2 2 HOH HOH A . C 2 HOH 2 3 3 HOH HOH A . C 2 HOH 3 5 5 HOH HOH A . C 2 HOH 4 6 6 HOH HOH A . C 2 HOH 5 7 7 HOH HOH A . C 2 HOH 6 8 8 HOH HOH A . C 2 HOH 7 9 9 HOH HOH A . C 2 HOH 8 10 10 HOH HOH A . C 2 HOH 9 12 12 HOH HOH A . C 2 HOH 10 13 13 HOH HOH A . C 2 HOH 11 18 18 HOH HOH A . C 2 HOH 12 19 19 HOH HOH A . C 2 HOH 13 20 20 HOH HOH A . C 2 HOH 14 22 22 HOH HOH A . C 2 HOH 15 24 24 HOH HOH A . C 2 HOH 16 25 25 HOH HOH A . C 2 HOH 17 27 27 HOH HOH A . C 2 HOH 18 29 29 HOH HOH A . D 2 HOH 1 1 1 HOH HOH B . D 2 HOH 2 4 4 HOH HOH B . D 2 HOH 3 11 11 HOH HOH B . D 2 HOH 4 14 14 HOH HOH B . D 2 HOH 5 15 15 HOH HOH B . D 2 HOH 6 16 16 HOH HOH B . D 2 HOH 7 17 17 HOH HOH B . D 2 HOH 8 21 21 HOH HOH B . D 2 HOH 9 23 23 HOH HOH B . D 2 HOH 10 26 26 HOH HOH B . D 2 HOH 11 28 28 HOH HOH B . #