HEADER HYDROLASE 28-JAN-09 3G0M TITLE CRYSTAL STRUCTURE OF CYSTEINE DESULFURATION PROTEIN SUFE FROM TITLE 2 SALMONELLA TYPHIMURIUM LT2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYSTEINE DESULFURATION PROTEIN SUFE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM LT2; SOURCE 3 ORGANISM_TAXID: 99287; SOURCE 4 STRAIN: LT2 / SGSC1412; SOURCE 5 ATCC: 700720; SOURCE 6 GENE: GI:16764724, NP_460339, STM1374, SUFE; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS CYSTEINE DESULFURATION PROTEIN SUFE, YNHA, CSGID, NATIONAL INSTITUTE KEYWDS 2 OF ALLERGY AND INFECTIOUS DISEASES, NIAID, HYDROLASE, STRUCTURAL KEYWDS 3 GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES EXPDTA X-RAY DIFFRACTION AUTHOR B.NOCEK,N.MALTSEVA,J.STAM,W.ANDERSON,A.JOACHIMIAK,CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 3 06-SEP-23 3G0M 1 REMARK SEQADV LINK REVDAT 2 13-JUL-11 3G0M 1 VERSN REVDAT 1 17-FEB-09 3G0M 0 JRNL AUTH B.NOCEK,N.MALTSEVA,J.STAM,W.ANDERSON,A.JOACHIMIAK JRNL TITL CRYSTAL STRUCTURE OF CYSTEINE DESULFURATION PROTEIN SUFE JRNL TITL 2 FROM SALMONELLA TYPHIMURIUM LT2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.76 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0054 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.76 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 11105 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 558 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.76 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.81 REMARK 3 REFLECTION IN BIN (WORKING SET) : 708 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 84.68 REMARK 3 BIN R VALUE (WORKING SET) : 0.2580 REMARK 3 BIN FREE R VALUE SET COUNT : 38 REMARK 3 BIN FREE R VALUE : 0.2750 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1101 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 62 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.90000 REMARK 3 B22 (A**2) : 2.22000 REMARK 3 B33 (A**2) : 0.71000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.10000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.144 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.141 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.093 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.347 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1143 ; 0.020 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 800 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1539 ; 1.638 ; 1.950 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1937 ; 0.945 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 139 ; 4.714 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 55 ;36.966 ;23.455 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 205 ;13.872 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;16.864 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 170 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1252 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 232 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 691 ; 0.911 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 277 ; 0.306 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1110 ; 1.493 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 452 ; 2.685 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 428 ; 4.286 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 6 REMARK 3 ORIGIN FOR THE GROUP (A): 26.2231 30.0077 31.5264 REMARK 3 T TENSOR REMARK 3 T11: 0.5029 T22: 0.2927 REMARK 3 T33: 0.4627 T12: -0.0310 REMARK 3 T13: 0.0553 T23: -0.0105 REMARK 3 L TENSOR REMARK 3 L11: 8.1249 L22: 6.9875 REMARK 3 L33: 10.5028 L12: -3.8068 REMARK 3 L13: -1.1793 L23: 7.8817 REMARK 3 S TENSOR REMARK 3 S11: -0.2986 S12: -0.5540 S13: 0.7836 REMARK 3 S21: -0.0669 S22: 0.4362 S23: -0.3518 REMARK 3 S31: -0.2547 S32: 0.2920 S33: -0.1376 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 7 A 16 REMARK 3 ORIGIN FOR THE GROUP (A): 29.6665 22.1061 23.5365 REMARK 3 T TENSOR REMARK 3 T11: 0.1722 T22: 0.2032 REMARK 3 T33: 0.1555 T12: -0.0138 REMARK 3 T13: 0.0014 T23: 0.0259 REMARK 3 L TENSOR REMARK 3 L11: 9.9364 L22: 7.6575 REMARK 3 L33: 2.9730 L12: -6.4586 REMARK 3 L13: 2.1190 L23: 0.1004 REMARK 3 S TENSOR REMARK 3 S11: 0.1857 S12: 0.7551 S13: 0.1591 REMARK 3 S21: -0.3374 S22: -0.0782 S23: -0.1920 REMARK 3 S31: -0.0242 S32: 0.3308 S33: -0.1075 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 17 A 23 REMARK 3 ORIGIN FOR THE GROUP (A): 34.7784 11.8627 30.0326 REMARK 3 T TENSOR REMARK 3 T11: 0.2046 T22: 0.2480 REMARK 3 T33: 0.2187 T12: -0.0004 REMARK 3 T13: 0.0229 T23: 0.0101 REMARK 3 L TENSOR REMARK 3 L11: 0.7785 L22: 9.5827 REMARK 3 L33: 6.8029 L12: -0.5654 REMARK 3 L13: 2.3008 L23: -1.5313 REMARK 3 S TENSOR REMARK 3 S11: 0.1103 S12: 0.0607 S13: 0.0142 REMARK 3 S21: -0.3295 S22: -0.1429 S23: 0.0345 REMARK 3 S31: 0.3140 S32: 0.1642 S33: 0.0326 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 24 A 31 REMARK 3 ORIGIN FOR THE GROUP (A): 31.1091 18.1216 36.2676 REMARK 3 T TENSOR REMARK 3 T11: 0.1722 T22: 0.2299 REMARK 3 T33: 0.1974 T12: -0.0376 REMARK 3 T13: 0.0085 T23: 0.0211 REMARK 3 L TENSOR REMARK 3 L11: 6.3208 L22: 2.8497 REMARK 3 L33: 3.6268 L12: -2.1129 REMARK 3 L13: -1.0134 L23: 2.8417 REMARK 3 S TENSOR REMARK 3 S11: -0.1456 S12: 0.0658 S13: -0.0011 REMARK 3 S21: 0.2831 S22: -0.0126 S23: 0.0227 REMARK 3 S31: 0.1073 S32: 0.2080 S33: 0.1582 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 32 A 36 REMARK 3 ORIGIN FOR THE GROUP (A): 26.5968 26.7835 41.9033 REMARK 3 T TENSOR REMARK 3 T11: 0.2279 T22: 0.2096 REMARK 3 T33: 0.2275 T12: -0.0287 REMARK 3 T13: -0.0309 T23: -0.0278 REMARK 3 L TENSOR REMARK 3 L11: 11.6710 L22: 9.9569 REMARK 3 L33: 5.6069 L12: -4.5387 REMARK 3 L13: -2.0042 L23: 0.2146 REMARK 3 S TENSOR REMARK 3 S11: 0.1097 S12: -0.1450 S13: 0.5987 REMARK 3 S21: 0.0361 S22: -0.0592 S23: -0.3117 REMARK 3 S31: -0.2438 S32: 0.0968 S33: -0.0505 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 37 A 43 REMARK 3 ORIGIN FOR THE GROUP (A): 14.1206 27.5228 49.3265 REMARK 3 T TENSOR REMARK 3 T11: 0.2616 T22: 0.3561 REMARK 3 T33: 0.1926 T12: 0.0203 REMARK 3 T13: -0.0047 T23: -0.0549 REMARK 3 L TENSOR REMARK 3 L11: 10.2438 L22: 9.2824 REMARK 3 L33: 5.8284 L12: 7.2295 REMARK 3 L13: 0.0162 L23: 2.2387 REMARK 3 S TENSOR REMARK 3 S11: 0.3108 S12: -0.3525 S13: 0.0029 REMARK 3 S21: 0.0239 S22: -0.2432 S23: 0.2195 REMARK 3 S31: 0.2427 S32: -0.7564 S33: -0.0676 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 44 A 58 REMARK 3 ORIGIN FOR THE GROUP (A): 12.7656 17.5452 44.4913 REMARK 3 T TENSOR REMARK 3 T11: 0.2035 T22: 0.2402 REMARK 3 T33: 0.0906 T12: -0.0541 REMARK 3 T13: 0.0207 T23: 0.0615 REMARK 3 L TENSOR REMARK 3 L11: 7.7795 L22: 7.5117 REMARK 3 L33: 8.2110 L12: 0.0145 REMARK 3 L13: 1.9896 L23: 0.7887 REMARK 3 S TENSOR REMARK 3 S11: 0.0601 S12: -0.9348 S13: -0.4069 REMARK 3 S21: 0.4575 S22: -0.1765 S23: 0.2966 REMARK 3 S31: 0.2540 S32: -0.1896 S33: 0.1164 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 59 A 63 REMARK 3 ORIGIN FOR THE GROUP (A): 8.6207 33.4673 36.2280 REMARK 3 T TENSOR REMARK 3 T11: 0.2950 T22: 0.2954 REMARK 3 T33: 0.2459 T12: 0.0675 REMARK 3 T13: 0.0254 T23: -0.0480 REMARK 3 L TENSOR REMARK 3 L11: 2.8034 L22: 18.0425 REMARK 3 L33: 5.6189 L12: -2.3024 REMARK 3 L13: 3.1225 L23: -8.3873 REMARK 3 S TENSOR REMARK 3 S11: -0.2250 S12: -0.3596 S13: 0.0501 REMARK 3 S21: 0.3992 S22: 0.1784 S23: 0.0128 REMARK 3 S31: -0.4094 S32: -0.4366 S33: 0.0466 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 64 A 72 REMARK 3 ORIGIN FOR THE GROUP (A): 14.0460 30.8628 36.1472 REMARK 3 T TENSOR REMARK 3 T11: 0.2387 T22: 0.1520 REMARK 3 T33: 0.1809 T12: -0.0380 REMARK 3 T13: -0.0128 T23: -0.0601 REMARK 3 L TENSOR REMARK 3 L11: 6.0320 L22: 9.5581 REMARK 3 L33: 9.8394 L12: -6.7928 REMARK 3 L13: 5.8126 L23: -9.3290 REMARK 3 S TENSOR REMARK 3 S11: -0.2831 S12: -0.1034 S13: 0.3406 REMARK 3 S21: 0.6647 S22: 0.0164 S23: -0.2831 REMARK 3 S31: -0.6782 S32: -0.0877 S33: 0.2667 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 73 A 91 REMARK 3 ORIGIN FOR THE GROUP (A): 20.8401 21.4769 35.6578 REMARK 3 T TENSOR REMARK 3 T11: 0.1508 T22: 0.1388 REMARK 3 T33: 0.1534 T12: -0.0227 REMARK 3 T13: 0.0042 T23: 0.0077 REMARK 3 L TENSOR REMARK 3 L11: 4.1632 L22: 2.3627 REMARK 3 L33: 2.8647 L12: -1.6317 REMARK 3 L13: 2.2418 L23: -1.3602 REMARK 3 S TENSOR REMARK 3 S11: -0.0500 S12: -0.1746 S13: 0.1065 REMARK 3 S21: 0.0857 S22: -0.0199 S23: -0.1004 REMARK 3 S31: -0.0350 S32: 0.0461 S33: 0.0700 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 92 A 103 REMARK 3 ORIGIN FOR THE GROUP (A): 10.9184 23.6052 24.3439 REMARK 3 T TENSOR REMARK 3 T11: 0.1330 T22: 0.1145 REMARK 3 T33: 0.1307 T12: 0.0014 REMARK 3 T13: -0.0041 T23: 0.0176 REMARK 3 L TENSOR REMARK 3 L11: 4.5077 L22: 9.8790 REMARK 3 L33: 5.0082 L12: -3.7317 REMARK 3 L13: -1.4553 L23: 2.7170 REMARK 3 S TENSOR REMARK 3 S11: 0.2135 S12: 0.3635 S13: 0.0806 REMARK 3 S21: -0.1913 S22: -0.1819 S23: 0.2105 REMARK 3 S31: -0.0418 S32: -0.1561 S33: -0.0316 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 104 A 112 REMARK 3 ORIGIN FOR THE GROUP (A): 22.6724 15.0242 23.9350 REMARK 3 T TENSOR REMARK 3 T11: 0.1623 T22: 0.1530 REMARK 3 T33: 0.1591 T12: 0.0373 REMARK 3 T13: 0.0116 T23: -0.0170 REMARK 3 L TENSOR REMARK 3 L11: 8.9568 L22: 8.0051 REMARK 3 L33: 5.0714 L12: -1.6659 REMARK 3 L13: 1.8359 L23: -0.7638 REMARK 3 S TENSOR REMARK 3 S11: -0.0314 S12: -0.1466 S13: -0.1969 REMARK 3 S21: -0.0374 S22: 0.1783 S23: -0.1047 REMARK 3 S31: 0.1149 S32: 0.2243 S33: -0.1469 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 113 A 120 REMARK 3 ORIGIN FOR THE GROUP (A): 23.1984 6.8534 34.1381 REMARK 3 T TENSOR REMARK 3 T11: 0.2762 T22: 0.1995 REMARK 3 T33: 0.2456 T12: 0.0199 REMARK 3 T13: -0.0025 T23: 0.0148 REMARK 3 L TENSOR REMARK 3 L11: 11.1989 L22: 6.1671 REMARK 3 L33: 0.3153 L12: 1.1858 REMARK 3 L13: -1.1183 L23: -1.2204 REMARK 3 S TENSOR REMARK 3 S11: -0.0957 S12: -0.0913 S13: -0.4454 REMARK 3 S21: 0.0048 S22: 0.0525 S23: -0.0584 REMARK 3 S31: 0.0318 S32: 0.0070 S33: 0.0432 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 121 A 126 REMARK 3 ORIGIN FOR THE GROUP (A): 15.2579 12.2850 34.8840 REMARK 3 T TENSOR REMARK 3 T11: 0.1657 T22: 0.1618 REMARK 3 T33: 0.1794 T12: -0.0051 REMARK 3 T13: -0.0055 T23: 0.0172 REMARK 3 L TENSOR REMARK 3 L11: 8.8068 L22: 10.8849 REMARK 3 L33: 5.0773 L12: -3.1320 REMARK 3 L13: -0.9539 L23: 1.8876 REMARK 3 S TENSOR REMARK 3 S11: 0.0310 S12: 0.0165 S13: -0.6125 REMARK 3 S21: -0.1514 S22: -0.0361 S23: 0.1330 REMARK 3 S31: 0.4995 S32: -0.0450 S33: 0.0051 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 127 A 138 REMARK 3 ORIGIN FOR THE GROUP (A): 6.5374 21.8552 32.5435 REMARK 3 T TENSOR REMARK 3 T11: 0.1807 T22: 0.1365 REMARK 3 T33: 0.1511 T12: -0.0126 REMARK 3 T13: 0.0081 T23: 0.0152 REMARK 3 L TENSOR REMARK 3 L11: 9.3290 L22: 5.0094 REMARK 3 L33: 4.3850 L12: -2.8423 REMARK 3 L13: 0.5704 L23: -1.5286 REMARK 3 S TENSOR REMARK 3 S11: -0.0352 S12: -0.0207 S13: -0.0216 REMARK 3 S21: 0.0078 S22: 0.0644 S23: 0.2693 REMARK 3 S31: -0.2365 S32: -0.1004 S33: -0.0291 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3G0M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JAN-09. REMARK 100 THE DEPOSITION ID IS D_1000051272. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-DEC-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11678 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.760 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.04200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 31.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.76 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : 0.29300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP, CCP4 REMARK 200 STARTING MODEL: PDB ENTRY 1MZG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 400, 0.1M LI2SO4, 0.1M REMARK 280 CACODYLATE, PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 21.30850 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 45 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 107 CB GLU A 107 CG -0.127 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 52 29.16 46.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IDP00875 RELATED DB: TARGETDB DBREF 3G0M A 1 138 UNP Q8ZPQ1 SUFE_SALTY 1 138 SEQADV 3G0M SER A -2 UNP Q8ZPQ1 EXPRESSION TAG SEQADV 3G0M ASN A -1 UNP Q8ZPQ1 EXPRESSION TAG SEQADV 3G0M ALA A 0 UNP Q8ZPQ1 EXPRESSION TAG SEQRES 1 A 141 SER ASN ALA MET ALA ALA LEU PRO ASP LYS GLU LYS LEU SEQRES 2 A 141 LEU ARG ASN PHE THR ARG CYS ALA ASN TRP GLU GLU LYS SEQRES 3 A 141 TYR LEU TYR ILE ILE GLU LEU GLY GLN ARG LEU ALA GLU SEQRES 4 A 141 LEU ASN PRO GLN ASP ARG ASN PRO GLN ASN THR ILE HIS SEQRES 5 A 141 GLY CYS GLN SER GLN VAL TRP ILE VAL MET ARG ARG ASN SEQRES 6 A 141 ALA ASN GLY ILE ILE GLU LEU GLN GLY ASP SER ASP ALA SEQRES 7 A 141 ALA ILE VAL LYS GLY LEU MET ALA VAL VAL PHE ILE LEU SEQRES 8 A 141 TYR HIS GLN MET THR ALA GLN ASP ILE VAL HIS PHE ASP SEQRES 9 A 141 VAL ARG PRO TRP PHE GLU LYS MET ALA LEU ALA GLN HIS SEQRES 10 A 141 LEU THR PRO SER ARG SER GLN GLY LEU GLU ALA MET ILE SEQRES 11 A 141 ARG ALA ILE ARG ALA LYS ALA ALA THR LEU SER HET BME A 201 4 HET EDO A 202 4 HET PEG A 203 7 HETNAM BME BETA-MERCAPTOETHANOL HETNAM EDO 1,2-ETHANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN EDO ETHYLENE GLYCOL FORMUL 2 BME C2 H6 O S FORMUL 3 EDO C2 H6 O2 FORMUL 4 PEG C4 H10 O3 FORMUL 5 HOH *62(H2 O) HELIX 1 1 ASP A 6 ARG A 16 1 11 HELIX 2 2 ASN A 19 ARG A 33 1 15 HELIX 3 3 ASN A 38 ARG A 42 5 5 HELIX 4 4 ASN A 43 THR A 47 5 5 HELIX 5 5 ALA A 75 HIS A 90 1 16 HELIX 6 6 THR A 93 PHE A 100 1 8 HELIX 7 7 VAL A 102 ALA A 110 1 9 HELIX 8 8 LEU A 111 LEU A 115 5 5 HELIX 9 9 THR A 116 THR A 136 1 21 SHEET 1 A 2 VAL A 55 ARG A 61 0 SHEET 2 A 2 ILE A 67 SER A 73 -1 O GLN A 70 N VAL A 58 LINK SG CYS A 17 S2 BME A 201 1555 1555 1.94 SITE 1 AC1 6 ASN A 13 ARG A 16 CYS A 17 GLU A 22 SITE 2 AC1 6 VAL A 98 ARG A 131 SITE 1 AC2 4 ALA A 75 ALA A 76 ILE A 77 ARG A 119 SITE 1 AC3 3 LEU A 11 PRO A 104 LYS A 108 CRYST1 31.791 42.617 45.006 90.00 98.15 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.031455 0.000000 0.004506 0.00000 SCALE2 0.000000 0.023465 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022446 0.00000