HEADER PROTEIN TRANSPORT 01-FEB-09 3G2U TITLE VHS DOMAIN OF HUMAN GGA1 COMPLEXED WITH SOTILIN C-TERMINAL PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADP-RIBOSYLATION FACTOR-BINDING PROTEIN GGA1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: VHS DOMAIN (N-TERMINAL DOMAIN); COMPND 5 SYNONYM: GOLGI-LOCALIZED, GAMMA EAR-CONTAINING, ARF-BINDING PROTEIN COMPND 6 1, GAMMA-ADAPTIN-RELATED PROTEIN 1; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: C-TERMINAL FRAGMENT OF SORTILIN; COMPND 10 CHAIN: C, D; COMPND 11 SYNONYM: NEUROTENSIN RECEPTOR 3, NTS3, NTR3, NT3; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) CODONPLUS-RIL; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX4T-1; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 OTHER_DETAILS: THE PEPTIDE WAS CHEMICALLY SYNTHESIZED. KEYWDS ADP-RIBOSYLATION FACTOR BINDING PROTEIN GGA1, VHS, ACIDIC-CLUSTER KEYWDS 2 DILEUCINE SIGNAL, SORTILIN, PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR J.F.CRAMER,M.A.BEHRENS,C.GUSTAFSEN,C.L.P.OLIVEIRA,J.S.PEDERSEN, AUTHOR 2 P.MADSEN,C.M.PETERSEN,S.S.THIRUP REVDAT 3 01-NOV-23 3G2U 1 REMARK SEQADV REVDAT 2 05-FEB-14 3G2U 1 JRNL VERSN REVDAT 1 15-DEC-09 3G2U 0 JRNL AUTH J.F.CRAMER,C.GUSTAFSEN,M.A.BEHRENS,C.L.P.OLIVEIRA, JRNL AUTH 2 J.S.PEDERSEN,P.MADSEN,C.M.PETERSEN,S.S.THIRUP JRNL TITL GGA AUTOINHIBITION REVISITED JRNL REF TRAFFIC V. 11 259 2010 JRNL REFN ISSN 1398-9219 JRNL PMID 20015111 JRNL DOI 10.1111/J.1600-0854.2009.01017.X REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 16629 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 836 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.6060 - 4.1790 0.96 2724 131 0.1960 0.1960 REMARK 3 2 4.1790 - 3.3180 0.98 2641 131 0.1790 0.2270 REMARK 3 3 3.3180 - 2.8980 0.99 2612 148 0.2020 0.2890 REMARK 3 4 2.8980 - 2.6330 0.99 2630 139 0.2030 0.2620 REMARK 3 5 2.6330 - 2.4450 1.00 2600 148 0.2080 0.2710 REMARK 3 6 2.4450 - 2.3000 0.99 2586 139 0.2140 0.2860 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.32 REMARK 3 B_SOL : 36.79 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.950 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.89500 REMARK 3 B22 (A**2) : 0.18200 REMARK 3 B33 (A**2) : -4.07700 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2411 REMARK 3 ANGLE : 0.986 3246 REMARK 3 CHIRALITY : 0.081 364 REMARK 3 PLANARITY : 0.017 414 REMARK 3 DIHEDRAL : 22.253 922 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 7.9323 -8.8986 -4.4834 REMARK 3 T TENSOR REMARK 3 T11: 0.0446 T22: 0.1117 REMARK 3 T33: 0.0945 T12: 0.0156 REMARK 3 T13: -0.0170 T23: 0.0123 REMARK 3 L TENSOR REMARK 3 L11: 2.1802 L22: 2.0974 REMARK 3 L33: 3.3020 L12: 1.0719 REMARK 3 L13: -0.2795 L23: 0.2974 REMARK 3 S TENSOR REMARK 3 S11: 0.0704 S12: -0.1023 S13: 0.1384 REMARK 3 S21: -0.0399 S22: -0.1615 S23: 0.0960 REMARK 3 S31: -0.2038 S32: -0.0882 S33: -0.0331 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): 7.7252 -1.5753 -29.2797 REMARK 3 T TENSOR REMARK 3 T11: 0.1158 T22: 0.0555 REMARK 3 T33: 0.1415 T12: 0.0235 REMARK 3 T13: 0.0243 T23: 0.0761 REMARK 3 L TENSOR REMARK 3 L11: 1.2146 L22: 1.9842 REMARK 3 L33: 5.6330 L12: 0.6273 REMARK 3 L13: 0.8756 L23: 0.0076 REMARK 3 S TENSOR REMARK 3 S11: -0.1000 S12: -0.0711 S13: -0.0327 REMARK 3 S21: -0.1355 S22: 0.0435 S23: 0.1108 REMARK 3 S31: -0.0863 S32: -0.0976 S33: -0.0052 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C REMARK 3 ORIGIN FOR THE GROUP (A): -6.6136 -15.0573 -9.7708 REMARK 3 T TENSOR REMARK 3 T11: 0.2186 T22: 0.4003 REMARK 3 T33: 0.2349 T12: -0.0513 REMARK 3 T13: -0.0717 T23: -0.0725 REMARK 3 L TENSOR REMARK 3 L11: 0.5335 L22: -0.2402 REMARK 3 L33: 0.9070 L12: 0.2072 REMARK 3 L13: -0.5660 L23: -0.1368 REMARK 3 S TENSOR REMARK 3 S11: 0.1009 S12: 0.0015 S13: 0.2580 REMARK 3 S21: -0.1300 S22: 0.0859 S23: 0.1949 REMARK 3 S31: -0.3106 S32: -0.4816 S33: 0.0344 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN D REMARK 3 ORIGIN FOR THE GROUP (A): 0.5820 -16.7458 -30.1765 REMARK 3 T TENSOR REMARK 3 T11: 0.4939 T22: 0.5728 REMARK 3 T33: 0.7248 T12: -0.2074 REMARK 3 T13: 0.0360 T23: 0.2828 REMARK 3 L TENSOR REMARK 3 L11: 0.0105 L22: 0.0255 REMARK 3 L33: 0.0429 L12: 0.0069 REMARK 3 L13: 0.0155 L23: 0.0185 REMARK 3 S TENSOR REMARK 3 S11: 0.2251 S12: -0.2030 S13: -0.7270 REMARK 3 S21: -0.2868 S22: -0.0976 S23: -0.1533 REMARK 3 S31: 0.2915 S32: -0.6735 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3G2U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-FEB-09. REMARK 100 THE DEPOSITION ID IS D_1000051352. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-MAR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : BW7B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8423 REMARK 200 MONOCHROMATOR : SI [111], HORIZONTALLY FOCUSSING REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16683 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 43.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 5.660 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.40 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.17 REMARK 200 R MERGE FOR SHELL (I) : 0.34900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1JWF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15%(W/V) PEG 5000 MME, 0.2M NH4I, 0.3M REMARK 280 1,6-HEXANEDIOL, 0.1M MES-NAOH, PH 6.0, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.24300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.88350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.36400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.88350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.24300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.36400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -2.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 PRO A 3 REMARK 465 ALA A 4 REMARK 465 MET A 5 REMARK 465 GLU A 6 REMARK 465 SER A 147 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 GLU B 2 REMARK 465 PRO B 3 REMARK 465 ALA B 4 REMARK 465 MET B 5 REMARK 465 GLU B 6 REMARK 465 SER B 147 REMARK 465 SER C 1 REMARK 465 GLY C 2 REMARK 465 TYR C 3 REMARK 465 HIS C 4 REMARK 465 ASP C 5 REMARK 465 ASP C 6 REMARK 465 SER D 1 REMARK 465 GLY D 2 REMARK 465 TYR D 3 REMARK 465 HIS D 4 REMARK 465 ASP D 5 REMARK 465 ASP D 6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLY A 78 N - CA - C ANGL. DEV. = -15.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 102 -104.15 -114.03 REMARK 500 TYR B 102 -101.62 -116.69 REMARK 500 ASP C 8 149.90 -172.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 CYS A 77 GLY A 78 115.98 REMARK 500 GLY A 78 LYS A 79 100.57 REMARK 500 VAL A 145 LYS A 146 -31.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLY A 78 13.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 148 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 149 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 150 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD A 151 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IOD B 148 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3G2S RELATED DB: PDB REMARK 900 RELATED ID: 3G2T RELATED DB: PDB REMARK 900 RELATED ID: 3G2V RELATED DB: PDB REMARK 900 RELATED ID: 3G2W RELATED DB: PDB DBREF 3G2U A 1 147 UNP Q9UJY5 GGA1_HUMAN 1 147 DBREF 3G2U B 1 147 UNP Q9UJY5 GGA1_HUMAN 1 147 DBREF 3G2U C 1 13 UNP Q99523 SORT_HUMAN 819 831 DBREF 3G2U D 1 13 UNP Q99523 SORT_HUMAN 819 831 SEQADV 3G2U GLY A -1 UNP Q9UJY5 EXPRESSION TAG SEQADV 3G2U SER A 0 UNP Q9UJY5 EXPRESSION TAG SEQADV 3G2U GLY B -1 UNP Q9UJY5 EXPRESSION TAG SEQADV 3G2U SER B 0 UNP Q9UJY5 EXPRESSION TAG SEQRES 1 A 149 GLY SER MET GLU PRO ALA MET GLU PRO GLU THR LEU GLU SEQRES 2 A 149 ALA ARG ILE ASN ARG ALA THR ASN PRO LEU ASN LYS GLU SEQRES 3 A 149 LEU ASP TRP ALA SER ILE ASN GLY PHE CYS GLU GLN LEU SEQRES 4 A 149 ASN GLU ASP PHE GLU GLY PRO PRO LEU ALA THR ARG LEU SEQRES 5 A 149 LEU ALA HIS LYS ILE GLN SER PRO GLN GLU TRP GLU ALA SEQRES 6 A 149 ILE GLN ALA LEU THR VAL LEU GLU THR CYS MET LYS SER SEQRES 7 A 149 CYS GLY LYS ARG PHE HIS ASP GLU VAL GLY LYS PHE ARG SEQRES 8 A 149 PHE LEU ASN GLU LEU ILE LYS VAL VAL SER PRO LYS TYR SEQRES 9 A 149 LEU GLY SER ARG THR SER GLU LYS VAL LYS ASN LYS ILE SEQRES 10 A 149 LEU GLU LEU LEU TYR SER TRP THR VAL GLY LEU PRO GLU SEQRES 11 A 149 GLU VAL LYS ILE ALA GLU ALA TYR GLN MET LEU LYS LYS SEQRES 12 A 149 GLN GLY ILE VAL LYS SER SEQRES 1 B 149 GLY SER MET GLU PRO ALA MET GLU PRO GLU THR LEU GLU SEQRES 2 B 149 ALA ARG ILE ASN ARG ALA THR ASN PRO LEU ASN LYS GLU SEQRES 3 B 149 LEU ASP TRP ALA SER ILE ASN GLY PHE CYS GLU GLN LEU SEQRES 4 B 149 ASN GLU ASP PHE GLU GLY PRO PRO LEU ALA THR ARG LEU SEQRES 5 B 149 LEU ALA HIS LYS ILE GLN SER PRO GLN GLU TRP GLU ALA SEQRES 6 B 149 ILE GLN ALA LEU THR VAL LEU GLU THR CYS MET LYS SER SEQRES 7 B 149 CYS GLY LYS ARG PHE HIS ASP GLU VAL GLY LYS PHE ARG SEQRES 8 B 149 PHE LEU ASN GLU LEU ILE LYS VAL VAL SER PRO LYS TYR SEQRES 9 B 149 LEU GLY SER ARG THR SER GLU LYS VAL LYS ASN LYS ILE SEQRES 10 B 149 LEU GLU LEU LEU TYR SER TRP THR VAL GLY LEU PRO GLU SEQRES 11 B 149 GLU VAL LYS ILE ALA GLU ALA TYR GLN MET LEU LYS LYS SEQRES 12 B 149 GLN GLY ILE VAL LYS SER SEQRES 1 C 13 SER GLY TYR HIS ASP ASP SER ASP GLU ASP LEU LEU GLU SEQRES 1 D 13 SER GLY TYR HIS ASP ASP SER ASP GLU ASP LEU LEU GLU HET IOD A 148 1 HET IOD A 149 1 HET IOD A 150 1 HET IOD A 151 1 HET IOD B 148 1 HETNAM IOD IODIDE ION FORMUL 5 IOD 5(I 1-) FORMUL 10 HOH *147(H2 O) HELIX 1 1 THR A 9 THR A 18 1 10 HELIX 2 2 ASP A 26 ASP A 40 1 15 HELIX 3 3 GLU A 42 GLN A 56 1 15 HELIX 4 4 GLN A 59 CYS A 77 1 19 HELIX 5 5 LYS A 79 GLY A 86 1 8 HELIX 6 6 LYS A 87 SER A 99 1 13 HELIX 7 7 LEU A 103 THR A 107 5 5 HELIX 8 8 SER A 108 LEU A 126 1 19 HELIX 9 9 GLU A 129 GLN A 142 1 14 HELIX 10 10 THR B 9 THR B 18 1 10 HELIX 11 11 ASP B 26 ASP B 40 1 15 HELIX 12 12 GLU B 42 GLN B 56 1 15 HELIX 13 13 GLN B 59 LYS B 75 1 17 HELIX 14 14 GLY B 78 GLY B 86 1 9 HELIX 15 15 LYS B 87 SER B 99 1 13 HELIX 16 16 SER B 108 LEU B 126 1 19 HELIX 17 17 GLU B 129 GLN B 142 1 14 SSBOND 1 CYS A 34 CYS A 73 1555 1555 2.04 SSBOND 2 CYS A 77 CYS B 77 1555 2555 2.09 SSBOND 3 CYS B 34 CYS B 73 1555 1555 2.05 SITE 1 AC1 2 LEU A 50 GLN B 59 SITE 1 AC2 3 PRO A 58 GLN A 59 LEU B 50 SITE 1 AC3 2 ASN A 38 GLY A 78 SITE 1 AC4 3 TRP A 27 GLN A 137 LYS A 140 SITE 1 AC5 2 GLU B 60 LYS B 110 CRYST1 48.486 72.728 103.767 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020625 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013750 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009637 0.00000