data_3G36 # _entry.id 3G36 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.351 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3G36 pdb_00003g36 10.2210/pdb3g36/pdb RCSB RCSB051364 ? ? WWPDB D_1000051364 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3G36 _pdbx_database_status.recvd_initial_deposition_date 2009-02-02 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Wang, X.' 1 ? 'Lou, Z.' 2 ? 'Bartlam, M.' 3 ? 'Rao, Z.' 4 ? # _citation.id primary _citation.title 'Crystal structure of the C-terminal domain of human DPY-30-like protein: A component of the histone methyltransferase complex' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 390 _citation.page_first 530 _citation.page_last 537 _citation.year 2009 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19481096 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2009.05.061 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, X.' 1 ? primary 'Lou, Z.' 2 ? primary 'Dong, X.' 3 ? primary 'Yang, W.' 4 ? primary 'Peng, Y.' 5 ? primary 'Yin, B.' 6 ? primary 'Gong, Y.' 7 ? primary 'Yuan, J.' 8 ? primary 'Zhou, W.' 9 ? primary 'Bartlam, M.' 10 ? primary 'Peng, X.' 11 ? primary 'Rao, Z.' 12 ? # _cell.entry_id 3G36 _cell.length_a 83.401 _cell.length_b 51.388 _cell.length_c 51.388 _cell.angle_alpha 90.00 _cell.angle_beta 107.58 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3G36 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein dpy-30 homolog' 6308.166 4 ? L69M 'C-terminal domain, UNI residues 45-99' ? 2 non-polymer syn '(2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL' 154.251 1 ? ? ? ? 3 non-polymer syn 2,3-DIHYDROXY-1,4-DITHIOBUTANE 154.251 1 ? ? ? ? 4 non-polymer syn '(2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL' 154.251 1 ? ? ? ? 5 non-polymer syn HEXANE-1,6-DIOL 118.174 1 ? ? ? ? 6 water nat water 18.015 361 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Dpy-30-like protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'KVDLQSLPTRAYLDQTVVPILLQG(MSE)AVLAKERPPNPIEFLASYLLKNKAQFEDRN' _entity_poly.pdbx_seq_one_letter_code_can KVDLQSLPTRAYLDQTVVPILLQGMAVLAKERPPNPIEFLASYLLKNKAQFEDRN _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 VAL n 1 3 ASP n 1 4 LEU n 1 5 GLN n 1 6 SER n 1 7 LEU n 1 8 PRO n 1 9 THR n 1 10 ARG n 1 11 ALA n 1 12 TYR n 1 13 LEU n 1 14 ASP n 1 15 GLN n 1 16 THR n 1 17 VAL n 1 18 VAL n 1 19 PRO n 1 20 ILE n 1 21 LEU n 1 22 LEU n 1 23 GLN n 1 24 GLY n 1 25 MSE n 1 26 ALA n 1 27 VAL n 1 28 LEU n 1 29 ALA n 1 30 LYS n 1 31 GLU n 1 32 ARG n 1 33 PRO n 1 34 PRO n 1 35 ASN n 1 36 PRO n 1 37 ILE n 1 38 GLU n 1 39 PHE n 1 40 LEU n 1 41 ALA n 1 42 SER n 1 43 TYR n 1 44 LEU n 1 45 LEU n 1 46 LYS n 1 47 ASN n 1 48 LYS n 1 49 ALA n 1 50 GLN n 1 51 PHE n 1 52 GLU n 1 53 ASP n 1 54 ARG n 1 55 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene DPY-30-like _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX-6P-1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DPY30_HUMAN _struct_ref.pdbx_db_accession Q9C005 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code KVDLQSLPTRAYLDQTVVPILLQGLAVLAKERPPNPIEFLASYLLKNKAQFEDRN _struct_ref.pdbx_align_begin 45 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3G36 A 1 ? 55 ? Q9C005 45 ? 99 ? 45 99 2 1 3G36 B 1 ? 55 ? Q9C005 45 ? 99 ? 45 99 3 1 3G36 C 1 ? 55 ? Q9C005 45 ? 99 ? 45 99 4 1 3G36 D 1 ? 55 ? Q9C005 45 ? 99 ? 45 99 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3G36 MSE A 25 ? UNP Q9C005 LEU 69 'engineered mutation' 69 1 2 3G36 MSE B 25 ? UNP Q9C005 LEU 69 'engineered mutation' 69 2 3 3G36 MSE C 25 ? UNP Q9C005 LEU 69 'engineered mutation' 69 3 4 3G36 MSE D 25 ? UNP Q9C005 LEU 69 'engineered mutation' 69 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DTT non-polymer . 2,3-DIHYDROXY-1,4-DITHIOBUTANE 1,4-DITHIOTHREITOL 'C4 H10 O2 S2' 154.251 DTU non-polymer . '(2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL' ? 'C4 H10 O2 S2' 154.251 DTV non-polymer . '(2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL' ? 'C4 H10 O2 S2' 154.251 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HEZ non-polymer . HEXANE-1,6-DIOL ? 'C6 H14 O2' 118.174 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3G36 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.08 _exptl_crystal.density_percent_sol 40.87 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '0.1M Bis-Tris, 28% PEG-MME 2000, 3% 1,6 hexanediol (additive), pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2008-05-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9798 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-5A' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline BL-5A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9798 # _reflns.entry_id 3G36 _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 1.2 _reflns.number_obs 51431 _reflns.number_all ? _reflns.percent_possible_obs 98.1 _reflns.pdbx_Rmerge_I_obs 0.048 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 16.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_CC_half ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_Rrim_I_all ? # _reflns_shell.d_res_high 1.2 _reflns_shell.d_res_low 1.3 _reflns_shell.percent_possible_all 79.3 _reflns_shell.Rmerge_I_obs 0.345 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.1 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_Rrim_I_all ? # _refine.entry_id 3G36 _refine.ls_d_res_high 1.200 _refine.ls_d_res_low 43.16 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 76.060 _refine.ls_number_reflns_obs 49236 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES: RESIDUAL ONLY' _refine.ls_R_factor_obs 0.197 _refine.ls_R_factor_R_work 0.195 _refine.ls_R_factor_R_free 0.227 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 2449 _refine.ls_number_reflns_R_work 46787 _refine.B_iso_mean 17.958 _refine.aniso_B[1][1] 0.000 _refine.aniso_B[2][2] -0.010 _refine.aniso_B[3][3] 0.060 _refine.aniso_B[1][2] -0.000 _refine.aniso_B[1][3] 0.090 _refine.aniso_B[2][3] -0.000 _refine.correlation_coeff_Fo_to_Fc 0.955 _refine.correlation_coeff_Fo_to_Fc_free 0.936 _refine.pdbx_overall_ESU_R 0.060 _refine.pdbx_overall_ESU_R_Free 0.063 _refine.overall_SU_ML 0.034 _refine.overall_SU_B 1.682 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.B_iso_max 398.02 _refine.B_iso_min 3.30 _refine.occupancy_max 1.00 _refine.occupancy_min 0.50 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_R_factor_all ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1624 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.number_atoms_solvent 361 _refine_hist.number_atoms_total 2017 _refine_hist.d_res_high 1.200 _refine_hist.d_res_low 43.16 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1684 0.012 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2285 1.353 2.035 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 201 5.181 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 69 38.443 25.362 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 293 11.651 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 8 17.140 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 275 0.103 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1224 0.008 0.022 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1037 0.873 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1688 1.638 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 647 2.333 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 597 3.781 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.200 _refine_ls_shell.d_res_low 1.231 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 11.190 _refine_ls_shell.number_reflns_R_work 505 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.358 _refine_ls_shell.R_factor_R_free 0.346 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 28 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 533 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.R_factor_obs ? # _struct.entry_id 3G36 _struct.title 'Crystal structure of the human DPY-30-like C-terminal domain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3G36 _struct_keywords.pdbx_keywords 'NUCLEAR PROTEIN' _struct_keywords.text 'X-type four-helix bundle, Nucleus, NUCLEAR PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 5 ? I N N 6 ? J N N 6 ? K N N 6 ? L N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 3 ? LEU A 7 ? ASP A 47 LEU A 51 5 ? 5 HELX_P HELX_P2 2 PRO A 8 ? GLN A 15 ? PRO A 52 GLN A 59 1 ? 8 HELX_P HELX_P3 3 VAL A 17 ? ARG A 32 ? VAL A 61 ARG A 76 1 ? 16 HELX_P HELX_P4 4 ASN A 35 ? LYS A 48 ? ASN A 79 LYS A 92 1 ? 14 HELX_P HELX_P5 5 ALA A 49 ? GLU A 52 ? ALA A 93 GLU A 96 5 ? 4 HELX_P HELX_P6 6 ASP B 3 ? LEU B 7 ? ASP B 47 LEU B 51 5 ? 5 HELX_P HELX_P7 7 PRO B 8 ? VAL B 17 ? PRO B 52 VAL B 61 1 ? 10 HELX_P HELX_P8 8 VAL B 17 ? ARG B 32 ? VAL B 61 ARG B 76 1 ? 16 HELX_P HELX_P9 9 ASN B 35 ? GLU B 52 ? ASN B 79 GLU B 96 1 ? 18 HELX_P HELX_P10 10 ASP C 3 ? LEU C 7 ? ASP C 47 LEU C 51 5 ? 5 HELX_P HELX_P11 11 PRO C 8 ? VAL C 17 ? PRO C 52 VAL C 61 1 ? 10 HELX_P HELX_P12 12 VAL C 17 ? ARG C 32 ? VAL C 61 ARG C 76 1 ? 16 HELX_P HELX_P13 13 ASN C 35 ? LYS C 48 ? ASN C 79 LYS C 92 1 ? 14 HELX_P HELX_P14 14 ALA C 49 ? GLU C 52 ? ALA C 93 GLU C 96 5 ? 4 HELX_P HELX_P15 15 ASP D 3 ? LEU D 7 ? ASP D 47 LEU D 51 5 ? 5 HELX_P HELX_P16 16 PRO D 8 ? VAL D 17 ? PRO D 52 VAL D 61 1 ? 10 HELX_P HELX_P17 17 VAL D 17 ? ARG D 32 ? VAL D 61 ARG D 76 1 ? 16 HELX_P HELX_P18 18 ASN D 35 ? LYS D 48 ? ASN D 79 LYS D 92 1 ? 14 HELX_P HELX_P19 19 ALA D 49 ? GLU D 52 ? ALA D 93 GLU D 96 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 24 C ? ? ? 1_555 A MSE 25 N ? ? A GLY 68 A MSE 69 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale2 covale both ? A MSE 25 C ? ? ? 1_555 A ALA 26 N ? ? A MSE 69 A ALA 70 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale3 covale both ? B GLY 24 C ? ? ? 1_555 B MSE 25 N ? ? B GLY 68 B MSE 69 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale4 covale both ? B MSE 25 C ? ? ? 1_555 B ALA 26 N ? ? B MSE 69 B ALA 70 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale5 covale both ? C GLY 24 C ? ? ? 1_555 C MSE 25 N ? ? C GLY 68 C MSE 69 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale6 covale both ? C MSE 25 C ? ? ? 1_555 C ALA 26 N ? ? C MSE 69 C ALA 70 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale7 covale both ? D GLY 24 C ? ? ? 1_555 D MSE 25 N ? ? D GLY 68 D MSE 69 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale8 covale both ? D MSE 25 C ? ? ? 1_555 D ALA 26 N ? ? D MSE 69 D ALA 70 1_555 ? ? ? ? ? ? ? 1.331 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id VAL _struct_mon_prot_cis.label_seq_id 2 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id VAL _struct_mon_prot_cis.auth_seq_id 46 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 ASP _struct_mon_prot_cis.pdbx_label_seq_id_2 3 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 ASP _struct_mon_prot_cis.pdbx_auth_seq_id_2 47 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -6.36 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software D HEZ 1 ? 8 'BINDING SITE FOR RESIDUE HEZ D 1' AC2 Software A DTU 1 ? 2 'BINDING SITE FOR RESIDUE DTU A 1' AC3 Software A DTT 100 ? 3 'BINDING SITE FOR RESIDUE DTT A 100' AC4 Software C DTV 1 ? 4 'BINDING SITE FOR RESIDUE DTV C 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 ARG B 32 ? ARG B 76 . ? 1_555 ? 2 AC1 8 GLN D 5 ? GLN D 49 . ? 1_555 ? 3 AC1 8 SER D 6 ? SER D 50 . ? 1_555 ? 4 AC1 8 LEU D 7 ? LEU D 51 . ? 1_555 ? 5 AC1 8 PRO D 8 ? PRO D 52 . ? 1_555 ? 6 AC1 8 HOH L . ? HOH D 356 . ? 1_555 ? 7 AC1 8 HOH L . ? HOH D 380 . ? 1_555 ? 8 AC1 8 HOH L . ? HOH D 393 . ? 1_555 ? 9 AC2 2 ARG A 10 ? ARG A 54 . ? 1_555 ? 10 AC2 2 ARG D 10 ? ARG D 54 . ? 1_555 ? 11 AC3 3 VAL A 18 ? VAL A 62 . ? 1_555 ? 12 AC3 3 MSE A 25 ? MSE A 69 . ? 1_555 ? 13 AC3 3 VAL C 18 ? VAL C 62 . ? 1_555 ? 14 AC4 4 ARG C 10 ? ARG C 54 . ? 1_555 ? 15 AC4 4 HOH K . ? HOH C 330 . ? 1_555 ? 16 AC4 4 LEU D 21 ? LEU D 65 . ? 1_555 ? 17 AC4 4 LEU D 22 ? LEU D 66 . ? 1_555 ? # _database_PDB_matrix.entry_id 3G36 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3G36 _atom_sites.fract_transf_matrix[1][1] 0.011990 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003798 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019460 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020413 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 45 ? ? ? A . n A 1 2 VAL 2 46 46 VAL VAL A . n A 1 3 ASP 3 47 47 ASP ASP A . n A 1 4 LEU 4 48 48 LEU LEU A . n A 1 5 GLN 5 49 49 GLN GLN A . n A 1 6 SER 6 50 50 SER SER A . n A 1 7 LEU 7 51 51 LEU LEU A . n A 1 8 PRO 8 52 52 PRO PRO A . n A 1 9 THR 9 53 53 THR THR A . n A 1 10 ARG 10 54 54 ARG ARG A . n A 1 11 ALA 11 55 55 ALA ALA A . n A 1 12 TYR 12 56 56 TYR TYR A . n A 1 13 LEU 13 57 57 LEU LEU A . n A 1 14 ASP 14 58 58 ASP ASP A . n A 1 15 GLN 15 59 59 GLN GLN A . n A 1 16 THR 16 60 60 THR THR A . n A 1 17 VAL 17 61 61 VAL VAL A . n A 1 18 VAL 18 62 62 VAL VAL A . n A 1 19 PRO 19 63 63 PRO PRO A . n A 1 20 ILE 20 64 64 ILE ILE A . n A 1 21 LEU 21 65 65 LEU LEU A . n A 1 22 LEU 22 66 66 LEU LEU A . n A 1 23 GLN 23 67 67 GLN GLN A . n A 1 24 GLY 24 68 68 GLY GLY A . n A 1 25 MSE 25 69 69 MSE MSE A . n A 1 26 ALA 26 70 70 ALA ALA A . n A 1 27 VAL 27 71 71 VAL VAL A . n A 1 28 LEU 28 72 72 LEU LEU A . n A 1 29 ALA 29 73 73 ALA ALA A . n A 1 30 LYS 30 74 74 LYS LYS A . n A 1 31 GLU 31 75 75 GLU GLU A . n A 1 32 ARG 32 76 76 ARG ARG A . n A 1 33 PRO 33 77 77 PRO PRO A . n A 1 34 PRO 34 78 78 PRO PRO A . n A 1 35 ASN 35 79 79 ASN ASN A . n A 1 36 PRO 36 80 80 PRO PRO A . n A 1 37 ILE 37 81 81 ILE ILE A . n A 1 38 GLU 38 82 82 GLU GLU A . n A 1 39 PHE 39 83 83 PHE PHE A . n A 1 40 LEU 40 84 84 LEU LEU A . n A 1 41 ALA 41 85 85 ALA ALA A . n A 1 42 SER 42 86 86 SER SER A . n A 1 43 TYR 43 87 87 TYR TYR A . n A 1 44 LEU 44 88 88 LEU LEU A . n A 1 45 LEU 45 89 89 LEU LEU A . n A 1 46 LYS 46 90 90 LYS LYS A . n A 1 47 ASN 47 91 91 ASN ASN A . n A 1 48 LYS 48 92 92 LYS LYS A . n A 1 49 ALA 49 93 93 ALA ALA A . n A 1 50 GLN 50 94 94 GLN GLN A . n A 1 51 PHE 51 95 95 PHE PHE A . n A 1 52 GLU 52 96 96 GLU GLU A . n A 1 53 ASP 53 97 97 ASP ASP A . n A 1 54 ARG 54 98 ? ? ? A . n A 1 55 ASN 55 99 ? ? ? A . n B 1 1 LYS 1 45 ? ? ? B . n B 1 2 VAL 2 46 46 VAL VAL B . n B 1 3 ASP 3 47 47 ASP ASP B . n B 1 4 LEU 4 48 48 LEU LEU B . n B 1 5 GLN 5 49 49 GLN GLN B . n B 1 6 SER 6 50 50 SER SER B . n B 1 7 LEU 7 51 51 LEU LEU B . n B 1 8 PRO 8 52 52 PRO PRO B . n B 1 9 THR 9 53 53 THR THR B . n B 1 10 ARG 10 54 54 ARG ARG B . n B 1 11 ALA 11 55 55 ALA ALA B . n B 1 12 TYR 12 56 56 TYR TYR B . n B 1 13 LEU 13 57 57 LEU LEU B . n B 1 14 ASP 14 58 58 ASP ASP B . n B 1 15 GLN 15 59 59 GLN GLN B . n B 1 16 THR 16 60 60 THR THR B . n B 1 17 VAL 17 61 61 VAL VAL B . n B 1 18 VAL 18 62 62 VAL VAL B . n B 1 19 PRO 19 63 63 PRO PRO B . n B 1 20 ILE 20 64 64 ILE ILE B . n B 1 21 LEU 21 65 65 LEU LEU B . n B 1 22 LEU 22 66 66 LEU LEU B . n B 1 23 GLN 23 67 67 GLN GLN B . n B 1 24 GLY 24 68 68 GLY GLY B . n B 1 25 MSE 25 69 69 MSE MSE B . n B 1 26 ALA 26 70 70 ALA ALA B . n B 1 27 VAL 27 71 71 VAL VAL B . n B 1 28 LEU 28 72 72 LEU LEU B . n B 1 29 ALA 29 73 73 ALA ALA B . n B 1 30 LYS 30 74 74 LYS LYS B . n B 1 31 GLU 31 75 75 GLU GLU B . n B 1 32 ARG 32 76 76 ARG ARG B . n B 1 33 PRO 33 77 77 PRO PRO B . n B 1 34 PRO 34 78 78 PRO PRO B . n B 1 35 ASN 35 79 79 ASN ASN B . n B 1 36 PRO 36 80 80 PRO PRO B . n B 1 37 ILE 37 81 81 ILE ILE B . n B 1 38 GLU 38 82 82 GLU GLU B . n B 1 39 PHE 39 83 83 PHE PHE B . n B 1 40 LEU 40 84 84 LEU LEU B . n B 1 41 ALA 41 85 85 ALA ALA B . n B 1 42 SER 42 86 86 SER SER B . n B 1 43 TYR 43 87 87 TYR TYR B . n B 1 44 LEU 44 88 88 LEU LEU B . n B 1 45 LEU 45 89 89 LEU LEU B . n B 1 46 LYS 46 90 90 LYS LYS B . n B 1 47 ASN 47 91 91 ASN ASN B . n B 1 48 LYS 48 92 92 LYS LYS B . n B 1 49 ALA 49 93 93 ALA ALA B . n B 1 50 GLN 50 94 94 GLN GLN B . n B 1 51 PHE 51 95 95 PHE PHE B . n B 1 52 GLU 52 96 96 GLU GLU B . n B 1 53 ASP 53 97 ? ? ? B . n B 1 54 ARG 54 98 ? ? ? B . n B 1 55 ASN 55 99 ? ? ? B . n C 1 1 LYS 1 45 ? ? ? C . n C 1 2 VAL 2 46 46 VAL VAL C . n C 1 3 ASP 3 47 47 ASP ASP C . n C 1 4 LEU 4 48 48 LEU LEU C . n C 1 5 GLN 5 49 49 GLN GLN C . n C 1 6 SER 6 50 50 SER SER C . n C 1 7 LEU 7 51 51 LEU LEU C . n C 1 8 PRO 8 52 52 PRO PRO C . n C 1 9 THR 9 53 53 THR THR C . n C 1 10 ARG 10 54 54 ARG ARG C . n C 1 11 ALA 11 55 55 ALA ALA C . n C 1 12 TYR 12 56 56 TYR TYR C . n C 1 13 LEU 13 57 57 LEU LEU C . n C 1 14 ASP 14 58 58 ASP ASP C . n C 1 15 GLN 15 59 59 GLN GLN C . n C 1 16 THR 16 60 60 THR THR C . n C 1 17 VAL 17 61 61 VAL VAL C . n C 1 18 VAL 18 62 62 VAL VAL C . n C 1 19 PRO 19 63 63 PRO PRO C . n C 1 20 ILE 20 64 64 ILE ILE C . n C 1 21 LEU 21 65 65 LEU LEU C . n C 1 22 LEU 22 66 66 LEU LEU C . n C 1 23 GLN 23 67 67 GLN GLN C . n C 1 24 GLY 24 68 68 GLY GLY C . n C 1 25 MSE 25 69 69 MSE MSE C . n C 1 26 ALA 26 70 70 ALA ALA C . n C 1 27 VAL 27 71 71 VAL VAL C . n C 1 28 LEU 28 72 72 LEU LEU C . n C 1 29 ALA 29 73 73 ALA ALA C . n C 1 30 LYS 30 74 74 LYS LYS C . n C 1 31 GLU 31 75 75 GLU GLU C . n C 1 32 ARG 32 76 76 ARG ARG C . n C 1 33 PRO 33 77 77 PRO PRO C . n C 1 34 PRO 34 78 78 PRO PRO C . n C 1 35 ASN 35 79 79 ASN ASN C . n C 1 36 PRO 36 80 80 PRO PRO C . n C 1 37 ILE 37 81 81 ILE ILE C . n C 1 38 GLU 38 82 82 GLU GLU C . n C 1 39 PHE 39 83 83 PHE PHE C . n C 1 40 LEU 40 84 84 LEU LEU C . n C 1 41 ALA 41 85 85 ALA ALA C . n C 1 42 SER 42 86 86 SER SER C . n C 1 43 TYR 43 87 87 TYR TYR C . n C 1 44 LEU 44 88 88 LEU LEU C . n C 1 45 LEU 45 89 89 LEU LEU C . n C 1 46 LYS 46 90 90 LYS LYS C . n C 1 47 ASN 47 91 91 ASN ASN C . n C 1 48 LYS 48 92 92 LYS LYS C . n C 1 49 ALA 49 93 93 ALA ALA C . n C 1 50 GLN 50 94 94 GLN GLN C . n C 1 51 PHE 51 95 95 PHE PHE C . n C 1 52 GLU 52 96 96 GLU GLU C . n C 1 53 ASP 53 97 ? ? ? C . n C 1 54 ARG 54 98 ? ? ? C . n C 1 55 ASN 55 99 ? ? ? C . n D 1 1 LYS 1 45 ? ? ? D . n D 1 2 VAL 2 46 46 VAL VAL D . n D 1 3 ASP 3 47 47 ASP ASP D . n D 1 4 LEU 4 48 48 LEU LEU D . n D 1 5 GLN 5 49 49 GLN GLN D . n D 1 6 SER 6 50 50 SER SER D . n D 1 7 LEU 7 51 51 LEU LEU D . n D 1 8 PRO 8 52 52 PRO PRO D . n D 1 9 THR 9 53 53 THR THR D . n D 1 10 ARG 10 54 54 ARG ARG D . n D 1 11 ALA 11 55 55 ALA ALA D . n D 1 12 TYR 12 56 56 TYR TYR D . n D 1 13 LEU 13 57 57 LEU LEU D . n D 1 14 ASP 14 58 58 ASP ASP D . n D 1 15 GLN 15 59 59 GLN GLN D . n D 1 16 THR 16 60 60 THR THR D . n D 1 17 VAL 17 61 61 VAL VAL D . n D 1 18 VAL 18 62 62 VAL VAL D . n D 1 19 PRO 19 63 63 PRO PRO D . n D 1 20 ILE 20 64 64 ILE ILE D . n D 1 21 LEU 21 65 65 LEU LEU D . n D 1 22 LEU 22 66 66 LEU LEU D . n D 1 23 GLN 23 67 67 GLN GLN D . n D 1 24 GLY 24 68 68 GLY GLY D . n D 1 25 MSE 25 69 69 MSE MSE D . n D 1 26 ALA 26 70 70 ALA ALA D . n D 1 27 VAL 27 71 71 VAL VAL D . n D 1 28 LEU 28 72 72 LEU LEU D . n D 1 29 ALA 29 73 73 ALA ALA D . n D 1 30 LYS 30 74 74 LYS LYS D . n D 1 31 GLU 31 75 75 GLU GLU D . n D 1 32 ARG 32 76 76 ARG ARG D . n D 1 33 PRO 33 77 77 PRO PRO D . n D 1 34 PRO 34 78 78 PRO PRO D . n D 1 35 ASN 35 79 79 ASN ASN D . n D 1 36 PRO 36 80 80 PRO PRO D . n D 1 37 ILE 37 81 81 ILE ILE D . n D 1 38 GLU 38 82 82 GLU GLU D . n D 1 39 PHE 39 83 83 PHE PHE D . n D 1 40 LEU 40 84 84 LEU LEU D . n D 1 41 ALA 41 85 85 ALA ALA D . n D 1 42 SER 42 86 86 SER SER D . n D 1 43 TYR 43 87 87 TYR TYR D . n D 1 44 LEU 44 88 88 LEU LEU D . n D 1 45 LEU 45 89 89 LEU LEU D . n D 1 46 LYS 46 90 90 LYS LYS D . n D 1 47 ASN 47 91 91 ASN ASN D . n D 1 48 LYS 48 92 92 LYS LYS D . n D 1 49 ALA 49 93 93 ALA ALA D . n D 1 50 GLN 50 94 94 GLN GLN D . n D 1 51 PHE 51 95 95 PHE PHE D . n D 1 52 GLU 52 96 96 GLU GLU D . n D 1 53 ASP 53 97 ? ? ? D . n D 1 54 ARG 54 98 ? ? ? D . n D 1 55 ASN 55 99 ? ? ? D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 DTU 1 1 1 DTU DTT A . F 3 DTT 1 100 1 DTT DTT A . G 4 DTV 1 1 1 DTV DTT C . H 5 HEZ 1 1 1 HEZ HEZ D . I 6 HOH 1 3 3 HOH HOH A . I 6 HOH 2 9 9 HOH HOH A . I 6 HOH 3 20 20 HOH HOH A . I 6 HOH 4 30 30 HOH HOH A . I 6 HOH 5 38 38 HOH HOH A . I 6 HOH 6 43 43 HOH HOH A . I 6 HOH 7 44 44 HOH HOH A . I 6 HOH 8 101 101 HOH HOH A . I 6 HOH 9 103 103 HOH HOH A . I 6 HOH 10 104 104 HOH HOH A . I 6 HOH 11 107 107 HOH HOH A . I 6 HOH 12 116 116 HOH HOH A . I 6 HOH 13 118 118 HOH HOH A . I 6 HOH 14 120 120 HOH HOH A . I 6 HOH 15 128 128 HOH HOH A . I 6 HOH 16 137 137 HOH HOH A . I 6 HOH 17 139 139 HOH HOH A . I 6 HOH 18 145 145 HOH HOH A . I 6 HOH 19 147 147 HOH HOH A . I 6 HOH 20 166 166 HOH HOH A . I 6 HOH 21 187 187 HOH HOH A . I 6 HOH 22 198 198 HOH HOH A . I 6 HOH 23 200 200 HOH HOH A . I 6 HOH 24 203 203 HOH HOH A . I 6 HOH 25 204 204 HOH HOH A . I 6 HOH 26 211 211 HOH HOH A . I 6 HOH 27 213 213 HOH HOH A . I 6 HOH 28 215 215 HOH HOH A . I 6 HOH 29 216 216 HOH HOH A . I 6 HOH 30 227 227 HOH HOH A . I 6 HOH 31 230 230 HOH HOH A . I 6 HOH 32 250 250 HOH HOH A . I 6 HOH 33 252 252 HOH HOH A . I 6 HOH 34 253 253 HOH HOH A . I 6 HOH 35 254 254 HOH HOH A . I 6 HOH 36 261 261 HOH HOH A . I 6 HOH 37 262 262 HOH HOH A . I 6 HOH 38 270 270 HOH HOH A . I 6 HOH 39 272 272 HOH HOH A . I 6 HOH 40 283 283 HOH HOH A . I 6 HOH 41 284 284 HOH HOH A . I 6 HOH 42 286 286 HOH HOH A . I 6 HOH 43 289 289 HOH HOH A . I 6 HOH 44 295 295 HOH HOH A . I 6 HOH 45 297 297 HOH HOH A . I 6 HOH 46 309 309 HOH HOH A . I 6 HOH 47 312 312 HOH HOH A . I 6 HOH 48 313 313 HOH HOH A . I 6 HOH 49 314 314 HOH HOH A . I 6 HOH 50 315 315 HOH HOH A . I 6 HOH 51 318 318 HOH HOH A . I 6 HOH 52 320 320 HOH HOH A . I 6 HOH 53 326 326 HOH HOH A . I 6 HOH 54 328 328 HOH HOH A . I 6 HOH 55 335 335 HOH HOH A . I 6 HOH 56 337 337 HOH HOH A . I 6 HOH 57 339 339 HOH HOH A . I 6 HOH 58 341 341 HOH HOH A . I 6 HOH 59 342 342 HOH HOH A . I 6 HOH 60 343 343 HOH HOH A . I 6 HOH 61 346 346 HOH HOH A . I 6 HOH 62 348 348 HOH HOH A . I 6 HOH 63 359 359 HOH HOH A . I 6 HOH 64 362 362 HOH HOH A . I 6 HOH 65 363 363 HOH HOH A . I 6 HOH 66 366 366 HOH HOH A . I 6 HOH 67 376 376 HOH HOH A . I 6 HOH 68 392 392 HOH HOH A . I 6 HOH 69 398 398 HOH HOH A . I 6 HOH 70 399 399 HOH HOH A . I 6 HOH 71 400 400 HOH HOH A . I 6 HOH 72 404 404 HOH HOH A . I 6 HOH 73 405 405 HOH HOH A . I 6 HOH 74 407 407 HOH HOH A . I 6 HOH 75 411 411 HOH HOH A . I 6 HOH 76 413 413 HOH HOH A . I 6 HOH 77 418 418 HOH HOH A . I 6 HOH 78 419 419 HOH HOH A . I 6 HOH 79 420 420 HOH HOH A . I 6 HOH 80 429 429 HOH HOH A . I 6 HOH 81 432 432 HOH HOH A . I 6 HOH 82 436 436 HOH HOH A . I 6 HOH 83 443 443 HOH HOH A . I 6 HOH 84 447 447 HOH HOH A . I 6 HOH 85 449 449 HOH HOH A . I 6 HOH 86 453 453 HOH HOH A . I 6 HOH 87 456 456 HOH HOH A . I 6 HOH 88 462 462 HOH HOH A . I 6 HOH 89 463 463 HOH HOH A . I 6 HOH 90 465 465 HOH HOH A . J 6 HOH 1 4 4 HOH HOH B . J 6 HOH 2 5 5 HOH HOH B . J 6 HOH 3 11 11 HOH HOH B . J 6 HOH 4 15 15 HOH HOH B . J 6 HOH 5 22 22 HOH HOH B . J 6 HOH 6 27 27 HOH HOH B . J 6 HOH 7 31 31 HOH HOH B . J 6 HOH 8 32 32 HOH HOH B . J 6 HOH 9 35 35 HOH HOH B . J 6 HOH 10 100 97 HOH HOH B . J 6 HOH 11 108 108 HOH HOH B . J 6 HOH 12 109 109 HOH HOH B . J 6 HOH 13 111 111 HOH HOH B . J 6 HOH 14 115 115 HOH HOH B . J 6 HOH 15 117 117 HOH HOH B . J 6 HOH 16 119 119 HOH HOH B . J 6 HOH 17 122 122 HOH HOH B . J 6 HOH 18 134 134 HOH HOH B . J 6 HOH 19 144 144 HOH HOH B . J 6 HOH 20 146 146 HOH HOH B . J 6 HOH 21 150 150 HOH HOH B . J 6 HOH 22 154 154 HOH HOH B . J 6 HOH 23 158 158 HOH HOH B . J 6 HOH 24 201 201 HOH HOH B . J 6 HOH 25 207 207 HOH HOH B . J 6 HOH 26 210 210 HOH HOH B . J 6 HOH 27 212 212 HOH HOH B . J 6 HOH 28 221 221 HOH HOH B . J 6 HOH 29 223 223 HOH HOH B . J 6 HOH 30 225 225 HOH HOH B . J 6 HOH 31 231 231 HOH HOH B . J 6 HOH 32 236 236 HOH HOH B . J 6 HOH 33 237 237 HOH HOH B . J 6 HOH 34 239 239 HOH HOH B . J 6 HOH 35 249 249 HOH HOH B . J 6 HOH 36 255 255 HOH HOH B . J 6 HOH 37 260 260 HOH HOH B . J 6 HOH 38 263 263 HOH HOH B . J 6 HOH 39 267 267 HOH HOH B . J 6 HOH 40 268 268 HOH HOH B . J 6 HOH 41 275 275 HOH HOH B . J 6 HOH 42 285 285 HOH HOH B . J 6 HOH 43 287 287 HOH HOH B . J 6 HOH 44 288 288 HOH HOH B . J 6 HOH 45 290 290 HOH HOH B . J 6 HOH 46 292 292 HOH HOH B . J 6 HOH 47 301 301 HOH HOH B . J 6 HOH 48 303 303 HOH HOH B . J 6 HOH 49 306 306 HOH HOH B . J 6 HOH 50 307 307 HOH HOH B . J 6 HOH 51 311 311 HOH HOH B . J 6 HOH 52 316 316 HOH HOH B . J 6 HOH 53 317 317 HOH HOH B . J 6 HOH 54 322 322 HOH HOH B . J 6 HOH 55 324 324 HOH HOH B . J 6 HOH 56 340 340 HOH HOH B . J 6 HOH 57 345 345 HOH HOH B . J 6 HOH 58 352 352 HOH HOH B . J 6 HOH 59 361 361 HOH HOH B . J 6 HOH 60 364 364 HOH HOH B . J 6 HOH 61 365 365 HOH HOH B . J 6 HOH 62 369 369 HOH HOH B . J 6 HOH 63 381 381 HOH HOH B . J 6 HOH 64 383 383 HOH HOH B . J 6 HOH 65 394 394 HOH HOH B . J 6 HOH 66 395 395 HOH HOH B . J 6 HOH 67 403 403 HOH HOH B . J 6 HOH 68 417 417 HOH HOH B . J 6 HOH 69 425 425 HOH HOH B . J 6 HOH 70 430 430 HOH HOH B . J 6 HOH 71 431 431 HOH HOH B . J 6 HOH 72 435 435 HOH HOH B . J 6 HOH 73 438 438 HOH HOH B . J 6 HOH 74 441 441 HOH HOH B . J 6 HOH 75 444 444 HOH HOH B . J 6 HOH 76 446 446 HOH HOH B . J 6 HOH 77 448 448 HOH HOH B . J 6 HOH 78 450 450 HOH HOH B . J 6 HOH 79 451 451 HOH HOH B . K 6 HOH 1 8 8 HOH HOH C . K 6 HOH 2 14 14 HOH HOH C . K 6 HOH 3 33 33 HOH HOH C . K 6 HOH 4 34 34 HOH HOH C . K 6 HOH 5 39 39 HOH HOH C . K 6 HOH 6 100 98 HOH HOH C . K 6 HOH 7 102 102 HOH HOH C . K 6 HOH 8 105 105 HOH HOH C . K 6 HOH 9 123 123 HOH HOH C . K 6 HOH 10 131 131 HOH HOH C . K 6 HOH 11 141 141 HOH HOH C . K 6 HOH 12 142 142 HOH HOH C . K 6 HOH 13 143 143 HOH HOH C . K 6 HOH 14 156 156 HOH HOH C . K 6 HOH 15 159 159 HOH HOH C . K 6 HOH 16 161 161 HOH HOH C . K 6 HOH 17 168 168 HOH HOH C . K 6 HOH 18 171 171 HOH HOH C . K 6 HOH 19 173 173 HOH HOH C . K 6 HOH 20 175 175 HOH HOH C . K 6 HOH 21 181 181 HOH HOH C . K 6 HOH 22 183 183 HOH HOH C . K 6 HOH 23 185 185 HOH HOH C . K 6 HOH 24 191 191 HOH HOH C . K 6 HOH 25 192 192 HOH HOH C . K 6 HOH 26 196 196 HOH HOH C . K 6 HOH 27 209 209 HOH HOH C . K 6 HOH 28 218 218 HOH HOH C . K 6 HOH 29 234 234 HOH HOH C . K 6 HOH 30 238 238 HOH HOH C . K 6 HOH 31 241 241 HOH HOH C . K 6 HOH 32 242 242 HOH HOH C . K 6 HOH 33 243 243 HOH HOH C . K 6 HOH 34 264 264 HOH HOH C . K 6 HOH 35 265 265 HOH HOH C . K 6 HOH 36 269 269 HOH HOH C . K 6 HOH 37 276 276 HOH HOH C . K 6 HOH 38 277 277 HOH HOH C . K 6 HOH 39 281 281 HOH HOH C . K 6 HOH 40 294 294 HOH HOH C . K 6 HOH 41 296 296 HOH HOH C . K 6 HOH 42 300 300 HOH HOH C . K 6 HOH 43 302 302 HOH HOH C . K 6 HOH 44 305 305 HOH HOH C . K 6 HOH 45 321 321 HOH HOH C . K 6 HOH 46 327 327 HOH HOH C . K 6 HOH 47 330 330 HOH HOH C . K 6 HOH 48 332 332 HOH HOH C . K 6 HOH 49 333 333 HOH HOH C . K 6 HOH 50 336 336 HOH HOH C . K 6 HOH 51 344 344 HOH HOH C . K 6 HOH 52 349 349 HOH HOH C . K 6 HOH 53 351 351 HOH HOH C . K 6 HOH 54 353 353 HOH HOH C . K 6 HOH 55 368 368 HOH HOH C . K 6 HOH 56 386 386 HOH HOH C . K 6 HOH 57 389 389 HOH HOH C . K 6 HOH 58 390 390 HOH HOH C . K 6 HOH 59 391 391 HOH HOH C . K 6 HOH 60 401 401 HOH HOH C . K 6 HOH 61 409 409 HOH HOH C . K 6 HOH 62 412 412 HOH HOH C . K 6 HOH 63 422 422 HOH HOH C . K 6 HOH 64 423 423 HOH HOH C . K 6 HOH 65 424 424 HOH HOH C . K 6 HOH 66 426 426 HOH HOH C . K 6 HOH 67 427 427 HOH HOH C . K 6 HOH 68 434 434 HOH HOH C . K 6 HOH 69 439 439 HOH HOH C . K 6 HOH 70 440 440 HOH HOH C . K 6 HOH 71 454 454 HOH HOH C . K 6 HOH 72 455 455 HOH HOH C . K 6 HOH 73 458 458 HOH HOH C . K 6 HOH 74 461 461 HOH HOH C . K 6 HOH 75 464 464 HOH HOH C . L 6 HOH 1 2 2 HOH HOH D . L 6 HOH 2 6 6 HOH HOH D . L 6 HOH 3 10 10 HOH HOH D . L 6 HOH 4 12 12 HOH HOH D . L 6 HOH 5 13 13 HOH HOH D . L 6 HOH 6 16 16 HOH HOH D . L 6 HOH 7 17 17 HOH HOH D . L 6 HOH 8 23 23 HOH HOH D . L 6 HOH 9 28 28 HOH HOH D . L 6 HOH 10 36 36 HOH HOH D . L 6 HOH 11 40 40 HOH HOH D . L 6 HOH 12 41 41 HOH HOH D . L 6 HOH 13 100 100 HOH HOH D . L 6 HOH 14 101 47 HOH HOH D . L 6 HOH 15 102 48 HOH HOH D . L 6 HOH 16 103 49 HOH HOH D . L 6 HOH 17 104 50 HOH HOH D . L 6 HOH 18 105 51 HOH HOH D . L 6 HOH 19 106 106 HOH HOH D . L 6 HOH 20 107 52 HOH HOH D . L 6 HOH 21 108 53 HOH HOH D . L 6 HOH 22 109 55 HOH HOH D . L 6 HOH 23 110 56 HOH HOH D . L 6 HOH 24 111 58 HOH HOH D . L 6 HOH 25 112 59 HOH HOH D . L 6 HOH 26 113 61 HOH HOH D . L 6 HOH 27 114 114 HOH HOH D . L 6 HOH 28 115 62 HOH HOH D . L 6 HOH 29 116 65 HOH HOH D . L 6 HOH 30 117 68 HOH HOH D . L 6 HOH 31 118 72 HOH HOH D . L 6 HOH 32 119 73 HOH HOH D . L 6 HOH 33 120 74 HOH HOH D . L 6 HOH 34 121 75 HOH HOH D . L 6 HOH 35 122 76 HOH HOH D . L 6 HOH 36 123 79 HOH HOH D . L 6 HOH 37 124 124 HOH HOH D . L 6 HOH 38 125 80 HOH HOH D . L 6 HOH 39 126 82 HOH HOH D . L 6 HOH 40 127 84 HOH HOH D . L 6 HOH 41 128 85 HOH HOH D . L 6 HOH 42 129 86 HOH HOH D . L 6 HOH 43 130 87 HOH HOH D . L 6 HOH 44 131 88 HOH HOH D . L 6 HOH 45 132 132 HOH HOH D . L 6 HOH 46 133 89 HOH HOH D . L 6 HOH 47 134 90 HOH HOH D . L 6 HOH 48 135 93 HOH HOH D . L 6 HOH 49 136 136 HOH HOH D . L 6 HOH 50 137 95 HOH HOH D . L 6 HOH 51 138 99 HOH HOH D . L 6 HOH 52 148 148 HOH HOH D . L 6 HOH 53 151 151 HOH HOH D . L 6 HOH 54 153 153 HOH HOH D . L 6 HOH 55 155 155 HOH HOH D . L 6 HOH 56 157 157 HOH HOH D . L 6 HOH 57 162 162 HOH HOH D . L 6 HOH 58 163 163 HOH HOH D . L 6 HOH 59 169 169 HOH HOH D . L 6 HOH 60 172 172 HOH HOH D . L 6 HOH 61 177 177 HOH HOH D . L 6 HOH 62 178 178 HOH HOH D . L 6 HOH 63 197 197 HOH HOH D . L 6 HOH 64 202 202 HOH HOH D . L 6 HOH 65 206 206 HOH HOH D . L 6 HOH 66 217 217 HOH HOH D . L 6 HOH 67 219 219 HOH HOH D . L 6 HOH 68 226 226 HOH HOH D . L 6 HOH 69 228 228 HOH HOH D . L 6 HOH 70 244 244 HOH HOH D . L 6 HOH 71 245 245 HOH HOH D . L 6 HOH 72 257 257 HOH HOH D . L 6 HOH 73 271 271 HOH HOH D . L 6 HOH 74 273 273 HOH HOH D . L 6 HOH 75 274 274 HOH HOH D . L 6 HOH 76 279 279 HOH HOH D . L 6 HOH 77 282 282 HOH HOH D . L 6 HOH 78 291 291 HOH HOH D . L 6 HOH 79 298 298 HOH HOH D . L 6 HOH 80 299 299 HOH HOH D . L 6 HOH 81 308 308 HOH HOH D . L 6 HOH 82 310 310 HOH HOH D . L 6 HOH 83 319 319 HOH HOH D . L 6 HOH 84 325 325 HOH HOH D . L 6 HOH 85 329 329 HOH HOH D . L 6 HOH 86 331 331 HOH HOH D . L 6 HOH 87 334 334 HOH HOH D . L 6 HOH 88 347 347 HOH HOH D . L 6 HOH 89 354 354 HOH HOH D . L 6 HOH 90 355 355 HOH HOH D . L 6 HOH 91 356 356 HOH HOH D . L 6 HOH 92 357 357 HOH HOH D . L 6 HOH 93 367 367 HOH HOH D . L 6 HOH 94 370 370 HOH HOH D . L 6 HOH 95 372 372 HOH HOH D . L 6 HOH 96 373 373 HOH HOH D . L 6 HOH 97 374 374 HOH HOH D . L 6 HOH 98 378 378 HOH HOH D . L 6 HOH 99 379 379 HOH HOH D . L 6 HOH 100 380 380 HOH HOH D . L 6 HOH 101 382 382 HOH HOH D . L 6 HOH 102 385 385 HOH HOH D . L 6 HOH 103 393 393 HOH HOH D . L 6 HOH 104 396 396 HOH HOH D . L 6 HOH 105 402 402 HOH HOH D . L 6 HOH 106 406 406 HOH HOH D . L 6 HOH 107 408 408 HOH HOH D . L 6 HOH 108 410 410 HOH HOH D . L 6 HOH 109 414 414 HOH HOH D . L 6 HOH 110 415 415 HOH HOH D . L 6 HOH 111 428 428 HOH HOH D . L 6 HOH 112 433 433 HOH HOH D . L 6 HOH 113 445 445 HOH HOH D . L 6 HOH 114 452 452 HOH HOH D . L 6 HOH 115 457 457 HOH HOH D . L 6 HOH 116 459 459 HOH HOH D . L 6 HOH 117 466 466 HOH HOH D . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 25 A MSE 69 ? MET SELENOMETHIONINE 2 B MSE 25 B MSE 69 ? MET SELENOMETHIONINE 3 C MSE 25 C MSE 69 ? MET SELENOMETHIONINE 4 D MSE 25 D MSE 69 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E,F,G,I,K 2 1 B,D,H,J,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2700 ? 1 MORE -23 ? 1 'SSA (A^2)' 6350 ? 2 'ABSA (A^2)' 2980 ? 2 MORE -24 ? 2 'SSA (A^2)' 6540 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-06-30 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2019-12-04 4 'Structure model' 1 3 2021-11-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Refinement description' 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' reflns 2 3 'Structure model' reflns_shell 3 3 'Structure model' struct_conn 4 4 'Structure model' database_2 5 4 'Structure model' struct_ref_seq_dif 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_reflns.pdbx_Rsym_value' 2 3 'Structure model' '_reflns_shell.pdbx_Rsym_value' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_database_2.pdbx_DOI' 5 4 'Structure model' '_database_2.pdbx_database_accession' 6 4 'Structure model' '_struct_ref_seq_dif.details' 7 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 8 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 9 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 5.0968 13.6046 16.7101 0.0031 0.0012 0.0054 0.0001 0.0006 0.0001 0.3617 0.1956 0.0777 0.0791 -0.0031 -0.0094 -0.0161 0.0087 0.0074 -0.0071 0.0123 0.0146 0.0085 -0.0097 0.0044 'X-RAY DIFFRACTION' 2 ? refined -3.2520 -1.1689 13.8030 0.0007 0.0003 0.0008 0.0004 0.0001 -0.0001 0.2060 0.0541 0.1853 0.0050 0.0409 0.0455 -0.0054 0.0007 0.0046 -0.0034 0.0101 0.0045 0.0033 -0.0051 -0.0055 'X-RAY DIFFRACTION' 3 ? refined 3.1771 19.9418 9.5333 0.0176 0.0016 0.0088 -0.0052 -0.0101 0.0029 0.0938 0.2107 0.1088 0.0475 -0.0759 -0.0120 -0.0108 0.0125 -0.0017 0.0028 0.0196 0.0184 -0.0371 -0.0177 0.0053 'X-RAY DIFFRACTION' 4 ? refined 2.8562 -7.5060 9.3029 0.0013 0.0001 0.0015 -0.0001 0.0002 -0.0001 0.2126 0.1066 0.1243 0.1024 -0.0249 0.0019 -0.0002 0.0006 -0.0005 -0.0016 -0.0121 -0.0124 -0.0018 0.0117 0.0003 'X-RAY DIFFRACTION' 5 ? refined 19.2585 4.0454 16.8801 0.0621 0.0992 0.0530 0.0257 -0.0364 -0.0167 11.9787 23.4189 1.2536 -15.5474 -0.2844 2.3789 0.3268 -0.0717 -0.2550 0.1706 -0.0553 -0.3410 -0.1458 0.1653 0.0890 'X-RAY DIFFRACTION' 6 ? refined 7.4733 3.7692 7.0321 0.0254 0.0268 0.0150 -0.0005 0.0007 0.0182 58.4000 8.2386 19.4661 -3.4586 -10.4417 12.5090 0.9167 -0.4079 -0.5088 0.7498 0.4694 -0.3147 0.1845 0.1892 -0.6717 'X-RAY DIFFRACTION' 7 ? refined 6.1381 11.4401 7.9435 0.0430 0.1340 0.1318 -0.0647 0.0503 -0.0723 68.2856 113.8862 69.9221 47.2058 -20.5042 57.8050 1.1765 -1.2277 0.0512 -1.3645 2.6997 2.8442 1.1165 -0.0904 0.1682 'X-RAY DIFFRACTION' 8 ? refined 1.8191 1.0476 5.6932 0.3537 0.4976 0.6485 0.0020 -0.0434 0.2545 0.0000 0.0001 0.0002 -0.0000 -0.0001 0.0001 0.0024 0.0012 -0.0036 0.0023 -0.0001 0.0006 -0.0049 -0.0048 -0.0064 'X-RAY DIFFRACTION' 9 ? refined 2.2685 5.6927 13.1860 0.0001 0.0004 0.0006 0.0001 0.0001 -0.0002 0.1475 0.2437 0.1149 0.1145 0.0365 0.0370 0.0003 0.0059 -0.0062 -0.0017 0.0038 0.0031 0.0036 -0.0010 0.0026 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 47 A 97 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 B 46 B 96 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 C 46 C 96 ? . . . . ? 'X-RAY DIFFRACTION' 4 4 D 46 D 96 ? . . . . ? 'X-RAY DIFFRACTION' 5 5 D 1 D 1 ? . . . . ? 'X-RAY DIFFRACTION' 6 6 A 1 A 1 ? . . . . ? 'X-RAY DIFFRACTION' 7 7 A 100 A 100 ? . . . . ? 'X-RAY DIFFRACTION' 8 8 C 1 C 1 ? . . . . ? 'X-RAY DIFFRACTION' 9 9 A 3 A 465 ? . . . . ? 'X-RAY DIFFRACTION' 10 9 C 8 C 464 ? . . . . ? 'X-RAY DIFFRACTION' 11 9 B 4 B 451 ? . . . . ? 'X-RAY DIFFRACTION' 12 9 D 2 D 466 ? . . . . ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 SHELXS phasing . ? 2 REFMAC refinement 5.5.0044 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 N B ASN 79 ? ? O B HOH 345 ? ? 1.78 2 1 O D HOH 202 ? ? O D HOH 329 ? ? 2.04 3 1 O A HOH 359 ? ? O C HOH 458 ? ? 2.08 4 1 O B HOH 31 ? ? O B HOH 345 ? ? 2.11 5 1 O B HOH 154 ? ? O B HOH 285 ? ? 2.12 6 1 O B ALA 70 ? ? O B HOH 450 ? ? 2.17 7 1 O B ALA 93 ? ? O B HOH 275 ? ? 2.19 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O D HOH 128 ? ? 1_555 O D HOH 128 ? ? 2_556 1.74 2 1 OD1 A ASP 97 ? ? 1_555 O B HOH 122 ? ? 4_556 2.14 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 60 ? ? -120.50 -53.06 2 1 GLU A 96 ? ? 111.19 -2.34 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 C2 ? A DTU 1 ? 'WRONG HAND' . 2 1 C3 ? A DTU 1 ? 'WRONG HAND' . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 45 ? A LYS 1 2 1 Y 1 A ARG 98 ? A ARG 54 3 1 Y 1 A ASN 99 ? A ASN 55 4 1 Y 1 B LYS 45 ? B LYS 1 5 1 Y 1 B ASP 97 ? B ASP 53 6 1 Y 1 B ARG 98 ? B ARG 54 7 1 Y 1 B ASN 99 ? B ASN 55 8 1 Y 1 C LYS 45 ? C LYS 1 9 1 Y 1 C ASP 97 ? C ASP 53 10 1 Y 1 C ARG 98 ? C ARG 54 11 1 Y 1 C ASN 99 ? C ASN 55 12 1 Y 1 D LYS 45 ? D LYS 1 13 1 Y 1 D ASP 97 ? D ASP 53 14 1 Y 1 D ARG 98 ? D ARG 54 15 1 Y 1 D ASN 99 ? D ASN 55 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '(2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL' DTU 3 2,3-DIHYDROXY-1,4-DITHIOBUTANE DTT 4 '(2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL' DTV 5 HEXANE-1,6-DIOL HEZ 6 water HOH #