data_3G4T # _entry.id 3G4T # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3G4T pdb_00003g4t 10.2210/pdb3g4t/pdb NDB PD1229 ? ? RCSB RCSB051423 ? ? WWPDB D_1000051423 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3FZI '1.9 Angstrom structure of the thermophilic exonuclease III homologue Mth0212' unspecified PDB 3G00 'Mth0212 in complex with a 9bp blunt end dsDNA at 1.7 Angstrom' unspecified PDB 3G0A 'Mth0212 with two bound manganese ions' unspecified PDB 3G0R 'Complex of Mth0212 and an 8bp dsDNA with distorted ends' unspecified PDB 3G1K 'Mth0212 (WT) crystallized in a monoclinic space group' unspecified PDB 3G2C 'Mth0212 in complex with a short ssDNA (CGTA)' unspecified PDB 3G2D ;Complex of Mth0212 and a 4 bp dsDNA with 3'-overhang ; unspecified PDB 3G38 'The catalytically inactive mutant Mth0212 (D151N) in complex with an 8 bp dsDNA' unspecified PDB 3G3C ;Mth0212 (WT) in complex with a 6bp dsDNA containing a single one nucleotide long 3'-overhang ; unspecified PDB 3G3Y 'Mth0212 in complex with ssDNA in space group P32' unspecified PDB 3G8V 'The rationally designed catalytically inactive mutant Mth0212(D151N)' unspecified PDB 3G91 '1.2 Angstrom structure of the exonuclease III homologue Mth0212' unspecified PDB 3GA6 'Mth0212 in complex with two DNA helices' unspecified # _pdbx_database_status.entry_id 3G4T _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2009-02-04 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lakomek, K.' 1 'Dickmanns, A.' 2 'Ficner, R.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA' J.Mol.Biol. 399 604 617 2010 JMOBAK UK 0022-2836 0070 ? 20434457 10.1016/j.jmb.2010.04.044 1 'The Methanothermobacter thermautotrophicus ExoIII homologue Mth212 is a DNA uridine endonuclease' 'Nucleic Acids Res.' 34 5325 5336 2006 NARHAD UK 0305-1048 0389 ? 17012282 10.1093/nar/gkl604 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lakomek, K.' 1 ? primary 'Dickmanns, A.' 2 ? primary 'Ciirdaeva, E.' 3 ? primary 'Schomacher, L.' 4 ? primary 'Ficner, R.' 5 ? 1 'Georg, J.' 6 ? 1 'Schomacher, L.' 7 ? 1 'Chong, J.P.J.' 8 ? 1 'Majernik, A.I.' 9 ? 1 'Raabe, M.' 10 ? 1 'Urlaub, H.' 11 ? 1 'Muller, S.' 12 ? 1 'Ciirdaeva, E.' 13 ? 1 'Kramer, W.' 14 ? 1 'Fritz, H.-J.' 15 ? # _cell.entry_id 3G4T _cell.length_a 100.764 _cell.length_b 79.600 _cell.length_c 99.409 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3G4T _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Exodeoxyribonuclease 31430.650 2 3.1.11.2 T2A ? ? 2 polymer syn "5'-D(*CP*GP*TP*AP*(UPS)P*TP*AP*CP*G)-3'" 2732.849 1 ? ? ? ? 3 polymer syn "5'-D(*CP*G*TP*AP*CP*TP*AP*CP*G)-3'" 2715.799 1 ? ? ? ? 4 non-polymer syn 'PHOSPHATE ION' 94.971 3 ? ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 6 water nat water 18.015 16 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name Mth0212 # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MAVLKIISWNVNGLRAVHRKGFLKWFMEEKPDILCLQEIKAAPEQLPRKLRHVEGYRSFFTPAERKGYSGVAMYTKVPPS SLREGFGVERFDTEGRIQIADFDDFLLYNIYFPNGKMSEERLKYKLEFYDAFLEDVNRERDSGRNVIICGDFNTAHREID LARPKENSNVSGFLPVERAWIDKFIENGYVDTFRMFNSDPGQYTWWSYRTRARERNVGWRLDYFFVNEEFKGKVKRSWIL SDVMGSDHCPIGLEIELLEHHHHHH ; ;MAVLKIISWNVNGLRAVHRKGFLKWFMEEKPDILCLQEIKAAPEQLPRKLRHVEGYRSFFTPAERKGYSGVAMYTKVPPS SLREGFGVERFDTEGRIQIADFDDFLLYNIYFPNGKMSEERLKYKLEFYDAFLEDVNRERDSGRNVIICGDFNTAHREID LARPKENSNVSGFLPVERAWIDKFIENGYVDTFRMFNSDPGQYTWWSYRTRARERNVGWRLDYFFVNEEFKGKVKRSWIL SDVMGSDHCPIGLEIELLEHHHHHH ; A,B ? 2 polydeoxyribonucleotide no yes '(DC)(DG)(DT)(DA)(UPS)(DT)(DA)(DC)(DG)' CGTAXTACG H ? 3 polydeoxyribonucleotide no no '(DC)(DG)(DT)(DA)(DC)(DT)(DA)(DC)(DG)' CGTACTACG I ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 VAL n 1 4 LEU n 1 5 LYS n 1 6 ILE n 1 7 ILE n 1 8 SER n 1 9 TRP n 1 10 ASN n 1 11 VAL n 1 12 ASN n 1 13 GLY n 1 14 LEU n 1 15 ARG n 1 16 ALA n 1 17 VAL n 1 18 HIS n 1 19 ARG n 1 20 LYS n 1 21 GLY n 1 22 PHE n 1 23 LEU n 1 24 LYS n 1 25 TRP n 1 26 PHE n 1 27 MET n 1 28 GLU n 1 29 GLU n 1 30 LYS n 1 31 PRO n 1 32 ASP n 1 33 ILE n 1 34 LEU n 1 35 CYS n 1 36 LEU n 1 37 GLN n 1 38 GLU n 1 39 ILE n 1 40 LYS n 1 41 ALA n 1 42 ALA n 1 43 PRO n 1 44 GLU n 1 45 GLN n 1 46 LEU n 1 47 PRO n 1 48 ARG n 1 49 LYS n 1 50 LEU n 1 51 ARG n 1 52 HIS n 1 53 VAL n 1 54 GLU n 1 55 GLY n 1 56 TYR n 1 57 ARG n 1 58 SER n 1 59 PHE n 1 60 PHE n 1 61 THR n 1 62 PRO n 1 63 ALA n 1 64 GLU n 1 65 ARG n 1 66 LYS n 1 67 GLY n 1 68 TYR n 1 69 SER n 1 70 GLY n 1 71 VAL n 1 72 ALA n 1 73 MET n 1 74 TYR n 1 75 THR n 1 76 LYS n 1 77 VAL n 1 78 PRO n 1 79 PRO n 1 80 SER n 1 81 SER n 1 82 LEU n 1 83 ARG n 1 84 GLU n 1 85 GLY n 1 86 PHE n 1 87 GLY n 1 88 VAL n 1 89 GLU n 1 90 ARG n 1 91 PHE n 1 92 ASP n 1 93 THR n 1 94 GLU n 1 95 GLY n 1 96 ARG n 1 97 ILE n 1 98 GLN n 1 99 ILE n 1 100 ALA n 1 101 ASP n 1 102 PHE n 1 103 ASP n 1 104 ASP n 1 105 PHE n 1 106 LEU n 1 107 LEU n 1 108 TYR n 1 109 ASN n 1 110 ILE n 1 111 TYR n 1 112 PHE n 1 113 PRO n 1 114 ASN n 1 115 GLY n 1 116 LYS n 1 117 MET n 1 118 SER n 1 119 GLU n 1 120 GLU n 1 121 ARG n 1 122 LEU n 1 123 LYS n 1 124 TYR n 1 125 LYS n 1 126 LEU n 1 127 GLU n 1 128 PHE n 1 129 TYR n 1 130 ASP n 1 131 ALA n 1 132 PHE n 1 133 LEU n 1 134 GLU n 1 135 ASP n 1 136 VAL n 1 137 ASN n 1 138 ARG n 1 139 GLU n 1 140 ARG n 1 141 ASP n 1 142 SER n 1 143 GLY n 1 144 ARG n 1 145 ASN n 1 146 VAL n 1 147 ILE n 1 148 ILE n 1 149 CYS n 1 150 GLY n 1 151 ASP n 1 152 PHE n 1 153 ASN n 1 154 THR n 1 155 ALA n 1 156 HIS n 1 157 ARG n 1 158 GLU n 1 159 ILE n 1 160 ASP n 1 161 LEU n 1 162 ALA n 1 163 ARG n 1 164 PRO n 1 165 LYS n 1 166 GLU n 1 167 ASN n 1 168 SER n 1 169 ASN n 1 170 VAL n 1 171 SER n 1 172 GLY n 1 173 PHE n 1 174 LEU n 1 175 PRO n 1 176 VAL n 1 177 GLU n 1 178 ARG n 1 179 ALA n 1 180 TRP n 1 181 ILE n 1 182 ASP n 1 183 LYS n 1 184 PHE n 1 185 ILE n 1 186 GLU n 1 187 ASN n 1 188 GLY n 1 189 TYR n 1 190 VAL n 1 191 ASP n 1 192 THR n 1 193 PHE n 1 194 ARG n 1 195 MET n 1 196 PHE n 1 197 ASN n 1 198 SER n 1 199 ASP n 1 200 PRO n 1 201 GLY n 1 202 GLN n 1 203 TYR n 1 204 THR n 1 205 TRP n 1 206 TRP n 1 207 SER n 1 208 TYR n 1 209 ARG n 1 210 THR n 1 211 ARG n 1 212 ALA n 1 213 ARG n 1 214 GLU n 1 215 ARG n 1 216 ASN n 1 217 VAL n 1 218 GLY n 1 219 TRP n 1 220 ARG n 1 221 LEU n 1 222 ASP n 1 223 TYR n 1 224 PHE n 1 225 PHE n 1 226 VAL n 1 227 ASN n 1 228 GLU n 1 229 GLU n 1 230 PHE n 1 231 LYS n 1 232 GLY n 1 233 LYS n 1 234 VAL n 1 235 LYS n 1 236 ARG n 1 237 SER n 1 238 TRP n 1 239 ILE n 1 240 LEU n 1 241 SER n 1 242 ASP n 1 243 VAL n 1 244 MET n 1 245 GLY n 1 246 SER n 1 247 ASP n 1 248 HIS n 1 249 CYS n 1 250 PRO n 1 251 ILE n 1 252 GLY n 1 253 LEU n 1 254 GLU n 1 255 ILE n 1 256 GLU n 1 257 LEU n 1 258 LEU n 1 259 GLU n 1 260 HIS n 1 261 HIS n 1 262 HIS n 1 263 HIS n 1 264 HIS n 1 265 HIS n 2 1 DC n 2 2 DG n 2 3 DT n 2 4 DA n 2 5 UPS n 2 6 DT n 2 7 DA n 2 8 DC n 2 9 DG n 3 1 DC n 3 2 DG n 3 3 DT n 3 4 DA n 3 5 DC n 3 6 DT n 3 7 DA n 3 8 DC n 3 9 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'mth0212, MTH212, MTH_212' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'Delta H (DSM 1053)' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Methanothermobacter thermautotrophicus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 187420 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21-CodonPlus(DE3)-RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET_B_001-mth212 (WT)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP O26314_METTH O26314 1 ;MTVLKIISWNVNGLRAVHRKGFLKWFMEEKPDILCLQEIKAAPEQLPRKLRHVEGYRSFFTPAERKGYSGVAMYTKVPPS SLREGFGVERFDTEGRIQIADFDDFLLYNIYFPNGKMSEERLKYKLEFYDAFLEDVNRERDSGRNVIICGDFNTAHREID LARPKENSNVSGFLPVERAWIDKFIENGYVDTFRMFNSDPGQYTWWSYRTRARERNVGWRLDYFFVNEEFKGKVKRSWIL SDVMGSDHCPIGLEIEL ; 1 ? 2 PDB 3G4T 3G4T 2 ? 1 ? 3 PDB 3G4T 3G4T 3 CGTACTACG 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3G4T A 1 ? 257 ? O26314 1 ? 257 ? 1 257 2 1 3G4T B 1 ? 257 ? O26314 1 ? 257 ? 1 257 3 2 3G4T H 1 ? 9 ? 3G4T 1 ? 9 ? 1 9 4 3 3G4T I 1 ? 9 ? 3G4T 1 ? 9 ? 1 9 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3G4T ALA A 2 ? UNP O26314 THR 2 'engineered mutation' 2 1 1 3G4T LEU A 258 ? UNP O26314 ? ? 'expression tag' 258 2 1 3G4T GLU A 259 ? UNP O26314 ? ? 'expression tag' 259 3 1 3G4T HIS A 260 ? UNP O26314 ? ? 'expression tag' 260 4 1 3G4T HIS A 261 ? UNP O26314 ? ? 'expression tag' 261 5 1 3G4T HIS A 262 ? UNP O26314 ? ? 'expression tag' 262 6 1 3G4T HIS A 263 ? UNP O26314 ? ? 'expression tag' 263 7 1 3G4T HIS A 264 ? UNP O26314 ? ? 'expression tag' 264 8 1 3G4T HIS A 265 ? UNP O26314 ? ? 'expression tag' 265 9 2 3G4T ALA B 2 ? UNP O26314 THR 2 'engineered mutation' 2 10 2 3G4T LEU B 258 ? UNP O26314 ? ? 'expression tag' 258 11 2 3G4T GLU B 259 ? UNP O26314 ? ? 'expression tag' 259 12 2 3G4T HIS B 260 ? UNP O26314 ? ? 'expression tag' 260 13 2 3G4T HIS B 261 ? UNP O26314 ? ? 'expression tag' 261 14 2 3G4T HIS B 262 ? UNP O26314 ? ? 'expression tag' 262 15 2 3G4T HIS B 263 ? UNP O26314 ? ? 'expression tag' 263 16 2 3G4T HIS B 264 ? UNP O26314 ? ? 'expression tag' 264 17 2 3G4T HIS B 265 ? UNP O26314 ? ? 'expression tag' 265 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UPS 'DNA linking' n "2'-deoxy-5'-O-thiophosphonouridine" ? 'C9 H13 N2 O7 P S' 324.247 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3G4T _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.92 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 57.85 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details ;reservoir: 40mM MgAc/50mM sodium cacodylate pH 6.0/30% (v/v) MPD; complex solution: 50mM KCl, 10mM KH2PO4/K2HPO4 pH 7.0, 1mM MgCl2, VAPOR DIFFUSION, SITTING DROP, temperature 293K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 KCl ? ? ? 1 2 1 KH2PO4/K2HPO4 ? ? ? 1 3 1 MgCl2 ? ? ? 1 4 1 H2O ? ? ? 1 5 2 MgAc ? ? ? 1 6 2 'sodium cacodylate' ? ? ? 1 7 2 MPD ? ? ? 1 8 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2008-03-07 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00605 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'BESSY BEAMLINE 14.2' _diffrn_source.pdbx_wavelength_list 1.00605 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site BESSY _diffrn_source.pdbx_synchrotron_beamline 14.2 # _reflns.entry_id 3G4T _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.64 _reflns.d_resolution_low 50.0 _reflns.number_all ? _reflns.number_obs 23676 _reflns.percent_possible_obs 97.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.047 _reflns.pdbx_netI_over_sigmaI 36.2 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.64 _reflns_shell.d_res_low 2.73 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 83.1 _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_obs 2.5 _reflns_shell.pdbx_Rsym_value 0.417 _reflns_shell.pdbx_redundancy 4.6 _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3G4T _refine.ls_d_res_high 2.640 _refine.ls_d_res_low 42.570 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 97.420 _refine.ls_number_reflns_obs 22367 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS; MOST OF THE TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS, FALL INTO GENERALLY ALLOWED REGIONS, ONLY A MINORITY BELONGS TO THE DISALLOWED REGIONS. ; _refine.ls_R_factor_obs 0.24319 _refine.ls_R_factor_R_work 0.24046 _refine.ls_R_factor_R_free 0.29684 _refine.ls_wR_factor_R_work 0.237 _refine.ls_wR_factor_R_free 0.290 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1213 _refine.B_iso_mean 67.685 _refine.aniso_B[1][1] 2.78 _refine.aniso_B[2][2] -4.29 _refine.aniso_B[3][3] 1.51 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.correlation_coeff_Fo_to_Fc 0.929 _refine.correlation_coeff_Fo_to_Fc_free 0.910 _refine.overall_SU_R_Cruickshank_DPI 0.684 _refine.overall_SU_R_free 0.363 _refine.pdbx_overall_ESU_R 0.684 _refine.pdbx_overall_ESU_R_Free 0.363 _refine.overall_SU_ML 0.288 _refine.overall_SU_B 13.804 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.overall_FOM_work_R_set 0.780 _refine.B_iso_max 165.40 _refine.B_iso_min 38.78 _refine.occupancy_max 1.00 _refine.occupancy_min 0.50 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model 'PDB ENTRY 3FZI' _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4248 _refine_hist.pdbx_number_atoms_nucleic_acid 278 _refine_hist.pdbx_number_atoms_ligand 17 _refine_hist.number_atoms_solvent 16 _refine_hist.number_atoms_total 4559 _refine_hist.d_res_high 2.640 _refine_hist.d_res_low 42.570 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' r_bond_refined_d 4686 0.010 0.022 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 6375 1.335 2.021 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 507 6.832 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 239 36.088 22.720 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 757 18.241 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 46 17.209 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 639 0.090 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 3560 0.004 0.020 ? ? 'X-RAY DIFFRACTION' r_nbd_refined 2104 0.211 0.200 ? ? 'X-RAY DIFFRACTION' r_nbtor_refined 3105 0.314 0.200 ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined 195 0.177 0.200 ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined 31 0.298 0.200 ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined 3 0.227 0.200 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 2581 0.708 1.500 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 4077 1.246 2.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 2483 1.176 3.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 2298 1.952 4.500 ? ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 1 A 181 0.04 0.05 'tight positional' 1 1 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 157 0.04 0.05 'tight positional' 2 2 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 544 0.06 0.05 'tight positional' 3 3 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 153 0.03 0.05 'tight positional' 4 4 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 38 0.03 0.05 'tight positional' 5 5 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 139 0.00 0.05 'tight positional' 6 6 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 671 0.05 0.05 'tight positional' 7 7 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 86 0.04 0.05 'tight positional' 8 8 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 181 1.82 0.50 'tight thermal' 1 9 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 157 2.11 0.50 'tight thermal' 2 10 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 544 1.83 0.50 'tight thermal' 3 11 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 153 1.75 0.50 'tight thermal' 4 12 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 38 0.80 0.50 'tight thermal' 5 13 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 139 0.00 0.50 'tight thermal' 6 14 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 671 3.32 0.50 'tight thermal' 7 15 'X-RAY DIFFRACTION' ? ? ? ? ? ? 1 A 86 1.35 0.50 'tight thermal' 8 16 'X-RAY DIFFRACTION' ? ? ? ? ? ? # _refine_ls_shell.d_res_high 2.638 _refine_ls_shell.d_res_low 2.706 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 78.470 _refine_ls_shell.number_reflns_R_work 1325 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.350 _refine_ls_shell.R_factor_R_free 0.366 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 60 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1385 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? # loop_ _struct_ncs_dom.id _struct_ncs_dom.details _struct_ncs_dom.pdbx_ens_id 1 A 1 2 B 1 1 A 2 2 B 2 1 A 3 2 B 3 1 A 4 2 B 4 1 A 5 2 B 5 1 A 6 2 B 6 1 A 7 2 B 7 1 A 8 2 B 8 # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 1 A ILE 6 . A PHE 26 . A ILE 6 A PHE 26 1 ? 1 2 1 B ILE 6 . B PHE 26 . B ILE 6 B PHE 26 1 ? 2 1 1 A GLU 28 . A PRO 47 . A GLU 28 A PRO 47 1 ? 2 2 1 B GLU 28 . B PRO 47 . B GLU 28 B PRO 47 1 ? 3 1 1 A VAL 53 . A GLU 119 . A VAL 53 A GLU 119 1 ? 3 2 1 B VAL 53 . B GLU 119 . B VAL 53 B GLU 119 1 ? 4 1 1 A ARG 121 . A ASN 137 . A ARG 121 A ASN 137 1 ? 4 2 1 B ARG 121 . B ASN 137 . B ARG 121 B ASN 137 1 ? 5 1 1 A GLU 139 . A GLY 143 . A GLU 139 A GLY 143 1 ? 5 2 1 B GLU 139 . B GLY 143 . B GLU 139 B GLY 143 1 ? 6 1 1 A ASN 145 . A ALA 162 . A ASN 145 A ALA 162 1 ? 6 2 1 B ASN 145 . B ALA 162 . B ASN 145 B ALA 162 1 ? 7 1 1 A PRO 164 . A LEU 240 . A PRO 164 A LEU 240 1 ? 7 2 1 B PRO 164 . B LEU 240 . B PRO 164 B LEU 240 1 ? 8 1 1 A MET 244 . A ILE 255 . A MET 244 A ILE 255 1 ? 8 2 1 B MET 244 . B ILE 255 . B MET 244 B ILE 255 1 ? # loop_ _struct_ncs_ens.id _struct_ncs_ens.details 1 ? 2 ? 3 ? 4 ? 5 ? 6 ? 7 ? 8 ? # _struct.entry_id 3G4T _struct.title 'Mth0212 (WT) in complex with a 7bp dsDNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3G4T _struct_keywords.text 'protein-DNA complex, double-stranded DNA, inorganic phosphate, Mg2+, HYDROLASE-DNA COMPLEX' _struct_keywords.pdbx_keywords HYDROLASE/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 4 ? H N N 5 ? I N N 4 ? J N N 6 ? K N N 6 ? L N N 6 ? # loop_ _struct_biol.id _struct_biol.details 1 ? 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 13 ? LYS A 20 ? GLY A 13 LYS A 20 1 ? 8 HELX_P HELX_P2 2 GLY A 21 ? GLU A 29 ? GLY A 21 GLU A 29 1 ? 9 HELX_P HELX_P3 3 ALA A 42 ? LEU A 46 ? ALA A 42 LEU A 46 5 ? 5 HELX_P HELX_P4 4 PRO A 47 ? HIS A 52 ? PRO A 47 HIS A 52 1 ? 6 HELX_P HELX_P5 5 VAL A 88 ? THR A 93 ? VAL A 88 THR A 93 1 ? 6 HELX_P HELX_P6 6 SER A 118 ? SER A 142 ? SER A 118 SER A 142 1 ? 25 HELX_P HELX_P7 7 ARG A 157 ? LEU A 161 ? ARG A 157 LEU A 161 5 ? 5 HELX_P HELX_P8 8 LEU A 174 ? ASN A 187 ? LEU A 174 ASN A 187 1 ? 14 HELX_P HELX_P9 9 THR A 192 ? ASN A 197 ? THR A 192 ASN A 197 1 ? 6 HELX_P HELX_P10 10 ARG A 211 ? ASN A 216 ? ARG A 211 ASN A 216 1 ? 6 HELX_P HELX_P11 11 GLU A 229 ? GLY A 232 ? GLU A 229 GLY A 232 5 ? 4 HELX_P HELX_P12 12 GLY B 13 ? ARG B 19 ? GLY B 13 ARG B 19 1 ? 7 HELX_P HELX_P13 13 GLY B 21 ? GLU B 29 ? GLY B 21 GLU B 29 1 ? 9 HELX_P HELX_P14 14 ALA B 42 ? LEU B 46 ? ALA B 42 LEU B 46 5 ? 5 HELX_P HELX_P15 15 PRO B 47 ? HIS B 52 ? PRO B 47 HIS B 52 1 ? 6 HELX_P HELX_P16 16 VAL B 88 ? THR B 93 ? VAL B 88 THR B 93 1 ? 6 HELX_P HELX_P17 17 SER B 118 ? SER B 142 ? SER B 118 SER B 142 1 ? 25 HELX_P HELX_P18 18 ARG B 157 ? LEU B 161 ? ARG B 157 LEU B 161 5 ? 5 HELX_P HELX_P19 19 LEU B 174 ? ASN B 187 ? LEU B 174 ASN B 187 1 ? 14 HELX_P HELX_P20 20 THR B 192 ? ASN B 197 ? THR B 192 ASN B 197 1 ? 6 HELX_P HELX_P21 21 ARG B 211 ? ASN B 216 ? ARG B 211 ASN B 216 1 ? 6 HELX_P HELX_P22 22 GLU B 229 ? VAL B 234 ? GLU B 229 VAL B 234 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C DA 4 "O3'" ? ? ? 1_555 C UPS 5 P ? ? H DA 4 H UPS 5 1_555 ? ? ? ? ? ? ? 1.603 ? ? covale2 covale both ? C UPS 5 "O3'" ? ? ? 1_555 C DT 6 P ? ? H UPS 5 H DT 6 1_555 ? ? ? ? ? ? ? 1.607 ? ? metalc1 metalc ? ? A GLU 38 OE2 ? ? ? 1_555 F MG . MG ? ? A GLU 38 A MG 267 1_555 ? ? ? ? ? ? ? 2.393 ? ? metalc2 metalc ? ? E PO4 . O4 ? ? ? 1_555 F MG . MG ? ? A PO4 266 A MG 267 1_555 ? ? ? ? ? ? ? 2.300 ? ? metalc3 metalc ? ? F MG . MG ? ? ? 1_555 C DA 7 "O3'" ? ? A MG 267 H DA 7 1_555 ? ? ? ? ? ? ? 2.612 ? ? metalc4 metalc ? ? B GLU 38 OE2 ? ? ? 1_555 H MG . MG ? ? B GLU 38 B MG 267 1_555 ? ? ? ? ? ? ? 2.753 ? ? metalc5 metalc ? ? G PO4 . O4 ? ? ? 1_555 H MG . MG ? ? B PO4 266 B MG 267 1_555 ? ? ? ? ? ? ? 2.285 ? ? metalc6 metalc ? ? H MG . MG ? ? ? 1_555 D DG 9 "O3'" ? ? B MG 267 I DG 9 1_555 ? ? ? ? ? ? ? 2.785 ? ? hydrog1 hydrog ? ? C DC 1 N3 ? ? ? 1_555 D DG 9 N1 ? ? H DC 1 I DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DC 1 N4 ? ? ? 1_555 D DG 9 O6 ? ? H DC 1 I DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DC 1 O2 ? ? ? 1_555 D DG 9 N2 ? ? H DC 1 I DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DG 2 N1 ? ? ? 1_555 D DC 8 N3 ? ? H DG 2 I DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DG 2 N2 ? ? ? 1_555 D DC 8 O2 ? ? H DG 2 I DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DG 2 O6 ? ? ? 1_555 D DC 8 N4 ? ? H DG 2 I DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DT 3 N3 ? ? ? 1_555 D DA 7 N1 ? ? H DT 3 I DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DT 3 O4 ? ? ? 1_555 D DA 7 N6 ? ? H DT 3 I DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DA 4 N1 ? ? ? 1_555 D DT 6 N3 ? ? H DA 4 I DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DA 4 N6 ? ? ? 1_555 D DT 6 O4 ? ? H DA 4 I DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DT 6 N3 ? ? ? 1_555 D DA 4 N1 ? ? H DT 6 I DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DT 6 O4 ? ? ? 1_555 D DA 4 N6 ? ? H DT 6 I DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DA 7 N1 ? ? ? 1_555 D DT 3 N3 ? ? H DA 7 I DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DA 7 N6 ? ? ? 1_555 D DT 3 O4 ? ? H DA 7 I DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? C ? 6 ? D ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? parallel D 4 5 ? anti-parallel D 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 57 ? THR A 61 ? ARG A 57 THR A 61 A 2 VAL A 71 ? THR A 75 ? VAL A 71 THR A 75 A 3 ILE A 33 ? GLN A 37 ? ILE A 33 GLN A 37 A 4 LEU A 4 ? ASN A 10 ? LEU A 4 ASN A 10 A 5 ILE A 251 ? ILE A 255 ? ILE A 251 ILE A 255 A 6 VAL A 234 ? ILE A 239 ? VAL A 234 ILE A 239 B 1 LEU A 82 ? ARG A 83 ? LEU A 82 ARG A 83 B 2 ILE A 97 ? ASP A 101 ? ILE A 97 ASP A 101 B 3 PHE A 105 ? TYR A 111 ? PHE A 105 TYR A 111 B 4 ASN A 145 ? ASP A 151 ? ASN A 145 ASP A 151 B 5 ASP A 222 ? ASN A 227 ? ASP A 222 ASN A 227 B 6 TYR A 189 ? ASP A 191 ? TYR A 189 ASP A 191 C 1 ARG B 57 ? THR B 61 ? ARG B 57 THR B 61 C 2 VAL B 71 ? THR B 75 ? VAL B 71 THR B 75 C 3 ILE B 33 ? GLN B 37 ? ILE B 33 GLN B 37 C 4 LEU B 4 ? ASN B 10 ? LEU B 4 ASN B 10 C 5 ILE B 251 ? ILE B 255 ? ILE B 251 ILE B 255 C 6 ARG B 236 ? ILE B 239 ? ARG B 236 ILE B 239 D 1 LEU B 82 ? ARG B 83 ? LEU B 82 ARG B 83 D 2 ILE B 97 ? ASP B 101 ? ILE B 97 ASP B 101 D 3 PHE B 105 ? TYR B 111 ? PHE B 105 TYR B 111 D 4 ASN B 145 ? ASP B 151 ? ASN B 145 ASP B 151 D 5 ASP B 222 ? ASN B 227 ? ASP B 222 ASN B 227 D 6 TYR B 189 ? ASP B 191 ? TYR B 189 ASP B 191 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 61 ? N THR A 61 O VAL A 71 ? O VAL A 71 A 2 3 O ALA A 72 ? O ALA A 72 N LEU A 36 ? N LEU A 36 A 3 4 O CYS A 35 ? O CYS A 35 N ILE A 7 ? N ILE A 7 A 4 5 N SER A 8 ? N SER A 8 O ILE A 251 ? O ILE A 251 A 5 6 O GLY A 252 ? O GLY A 252 N TRP A 238 ? N TRP A 238 B 1 2 N ARG A 83 ? N ARG A 83 O ILE A 99 ? O ILE A 99 B 2 3 N GLN A 98 ? N GLN A 98 O ASN A 109 ? O ASN A 109 B 3 4 N TYR A 108 ? N TYR A 108 O ILE A 147 ? O ILE A 147 B 4 5 N ILE A 148 ? N ILE A 148 O PHE A 225 ? O PHE A 225 B 5 6 O VAL A 226 ? O VAL A 226 N VAL A 190 ? N VAL A 190 C 1 2 N ARG B 57 ? N ARG B 57 O THR B 75 ? O THR B 75 C 2 3 O ALA B 72 ? O ALA B 72 N LEU B 36 ? N LEU B 36 C 3 4 O CYS B 35 ? O CYS B 35 N ILE B 7 ? N ILE B 7 C 4 5 N ILE B 6 ? N ILE B 6 O LEU B 253 ? O LEU B 253 C 5 6 O GLY B 252 ? O GLY B 252 N TRP B 238 ? N TRP B 238 D 1 2 N ARG B 83 ? N ARG B 83 O ILE B 99 ? O ILE B 99 D 2 3 N GLN B 98 ? N GLN B 98 O ASN B 109 ? O ASN B 109 D 3 4 N TYR B 108 ? N TYR B 108 O CYS B 149 ? O CYS B 149 D 4 5 N ILE B 148 ? N ILE B 148 O PHE B 225 ? O PHE B 225 D 5 6 O VAL B 226 ? O VAL B 226 N VAL B 190 ? N VAL B 190 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PO4 266 ? 9 'BINDING SITE FOR RESIDUE PO4 A 266' AC2 Software A MG 267 ? 7 'BINDING SITE FOR RESIDUE MG A 267' AC3 Software B PO4 266 ? 9 'BINDING SITE FOR RESIDUE PO4 B 266' AC4 Software B MG 267 ? 6 'BINDING SITE FOR RESIDUE MG B 267' AC5 Software I PO4 10 ? 4 'BINDING SITE FOR RESIDUE PO4 I 10' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 ASN A 10 ? ASN A 10 . ? 1_555 ? 2 AC1 9 GLU A 38 ? GLU A 38 . ? 1_555 ? 3 AC1 9 TYR A 111 ? TYR A 111 . ? 1_555 ? 4 AC1 9 ASN A 114 ? ASN A 114 . ? 1_555 ? 5 AC1 9 ASP A 151 ? ASP A 151 . ? 1_555 ? 6 AC1 9 ASN A 153 ? ASN A 153 . ? 1_555 ? 7 AC1 9 HIS A 248 ? HIS A 248 . ? 1_555 ? 8 AC1 9 MG F . ? MG A 267 . ? 1_555 ? 9 AC1 9 DA C 7 ? DA H 7 . ? 1_555 ? 10 AC2 7 ASN A 10 ? ASN A 10 . ? 1_555 ? 11 AC2 7 ASN A 12 ? ASN A 12 . ? 1_555 ? 12 AC2 7 GLU A 38 ? GLU A 38 . ? 1_555 ? 13 AC2 7 ASP A 247 ? ASP A 247 . ? 1_555 ? 14 AC2 7 HIS A 248 ? HIS A 248 . ? 1_555 ? 15 AC2 7 PO4 E . ? PO4 A 266 . ? 1_555 ? 16 AC2 7 DA C 7 ? DA H 7 . ? 1_555 ? 17 AC3 9 ASN B 10 ? ASN B 10 . ? 1_555 ? 18 AC3 9 GLU B 38 ? GLU B 38 . ? 1_555 ? 19 AC3 9 TYR B 111 ? TYR B 111 . ? 1_555 ? 20 AC3 9 ASN B 114 ? ASN B 114 . ? 1_555 ? 21 AC3 9 ASP B 151 ? ASP B 151 . ? 1_555 ? 22 AC3 9 ASN B 153 ? ASN B 153 . ? 1_555 ? 23 AC3 9 HIS B 248 ? HIS B 248 . ? 1_555 ? 24 AC3 9 MG H . ? MG B 267 . ? 1_555 ? 25 AC3 9 DG D 9 ? DG I 9 . ? 1_555 ? 26 AC4 6 ASN B 10 ? ASN B 10 . ? 1_555 ? 27 AC4 6 GLU B 38 ? GLU B 38 . ? 1_555 ? 28 AC4 6 ASP B 247 ? ASP B 247 . ? 1_555 ? 29 AC4 6 HIS B 248 ? HIS B 248 . ? 1_555 ? 30 AC4 6 PO4 G . ? PO4 B 266 . ? 1_555 ? 31 AC4 6 DG D 9 ? DG I 9 . ? 1_555 ? 32 AC5 4 ARG A 209 ? ARG A 209 . ? 1_555 ? 33 AC5 4 ARG A 211 ? ARG A 211 . ? 1_555 ? 34 AC5 4 DC C 1 ? DC H 1 . ? 2_655 ? 35 AC5 4 DT D 3 ? DT I 3 . ? 1_555 ? # _atom_sites.entry_id 3G4T _atom_sites.fract_transf_matrix[1][1] 0.009924 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012563 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010059 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 TRP 9 9 9 TRP TRP A . n A 1 10 ASN 10 10 10 ASN ASN A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 ARG 15 15 15 ARG ARG A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 HIS 18 18 18 HIS HIS A . n A 1 19 ARG 19 19 19 ARG ARG A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 PHE 22 22 22 PHE PHE A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 TRP 25 25 25 TRP TRP A . n A 1 26 PHE 26 26 26 PHE PHE A . n A 1 27 MET 27 27 27 MET MET A . n A 1 28 GLU 28 28 28 GLU GLU A . n A 1 29 GLU 29 29 29 GLU GLU A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 PRO 31 31 31 PRO PRO A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 CYS 35 35 35 CYS CYS A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 GLN 37 37 37 GLN GLN A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 ILE 39 39 39 ILE ILE A . n A 1 40 LYS 40 40 40 LYS LYS A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 PRO 43 43 43 PRO PRO A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 GLN 45 45 45 GLN GLN A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 ARG 48 48 48 ARG ARG A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 ARG 51 51 51 ARG ARG A . n A 1 52 HIS 52 52 52 HIS HIS A . n A 1 53 VAL 53 53 53 VAL VAL A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 TYR 56 56 56 TYR TYR A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 SER 58 58 58 SER SER A . n A 1 59 PHE 59 59 59 PHE PHE A . n A 1 60 PHE 60 60 60 PHE PHE A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 PRO 62 62 62 PRO PRO A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 ARG 65 65 65 ARG ARG A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 TYR 68 68 68 TYR TYR A . n A 1 69 SER 69 69 69 SER SER A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 MET 73 73 73 MET MET A . n A 1 74 TYR 74 74 74 TYR TYR A . n A 1 75 THR 75 75 75 THR THR A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 PRO 78 78 78 PRO PRO A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 SER 80 80 80 SER SER A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 GLU 84 84 84 GLU GLU A . n A 1 85 GLY 85 85 85 GLY GLY A . n A 1 86 PHE 86 86 86 PHE PHE A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 ARG 90 90 90 ARG ARG A . n A 1 91 PHE 91 91 91 PHE PHE A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 GLY 95 95 95 GLY GLY A . n A 1 96 ARG 96 96 96 ARG ARG A . n A 1 97 ILE 97 97 97 ILE ILE A . n A 1 98 GLN 98 98 98 GLN GLN A . n A 1 99 ILE 99 99 99 ILE ILE A . n A 1 100 ALA 100 100 100 ALA ALA A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 PHE 102 102 102 PHE PHE A . n A 1 103 ASP 103 103 103 ASP ASP A . n A 1 104 ASP 104 104 104 ASP ASP A . n A 1 105 PHE 105 105 105 PHE PHE A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 TYR 108 108 108 TYR TYR A . n A 1 109 ASN 109 109 109 ASN ASN A . n A 1 110 ILE 110 110 110 ILE ILE A . n A 1 111 TYR 111 111 111 TYR TYR A . n A 1 112 PHE 112 112 112 PHE PHE A . n A 1 113 PRO 113 113 113 PRO PRO A . n A 1 114 ASN 114 114 114 ASN ASN A . n A 1 115 GLY 115 115 115 GLY GLY A . n A 1 116 LYS 116 116 116 LYS LYS A . n A 1 117 MET 117 117 117 MET MET A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 GLU 119 119 119 GLU GLU A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 ARG 121 121 121 ARG ARG A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 LYS 123 123 123 LYS LYS A . n A 1 124 TYR 124 124 124 TYR TYR A . n A 1 125 LYS 125 125 125 LYS LYS A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 GLU 127 127 127 GLU GLU A . n A 1 128 PHE 128 128 128 PHE PHE A . n A 1 129 TYR 129 129 129 TYR TYR A . n A 1 130 ASP 130 130 130 ASP ASP A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 PHE 132 132 132 PHE PHE A . n A 1 133 LEU 133 133 133 LEU LEU A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 ASP 135 135 135 ASP ASP A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 ASN 137 137 137 ASN ASN A . n A 1 138 ARG 138 138 138 ARG ARG A . n A 1 139 GLU 139 139 139 GLU GLU A . n A 1 140 ARG 140 140 140 ARG ARG A . n A 1 141 ASP 141 141 141 ASP ASP A . n A 1 142 SER 142 142 142 SER SER A . n A 1 143 GLY 143 143 143 GLY GLY A . n A 1 144 ARG 144 144 144 ARG ARG A . n A 1 145 ASN 145 145 145 ASN ASN A . n A 1 146 VAL 146 146 146 VAL VAL A . n A 1 147 ILE 147 147 147 ILE ILE A . n A 1 148 ILE 148 148 148 ILE ILE A . n A 1 149 CYS 149 149 149 CYS CYS A . n A 1 150 GLY 150 150 150 GLY GLY A . n A 1 151 ASP 151 151 151 ASP ASP A . n A 1 152 PHE 152 152 152 PHE PHE A . n A 1 153 ASN 153 153 153 ASN ASN A . n A 1 154 THR 154 154 154 THR THR A . n A 1 155 ALA 155 155 155 ALA ALA A . n A 1 156 HIS 156 156 156 HIS HIS A . n A 1 157 ARG 157 157 157 ARG ARG A . n A 1 158 GLU 158 158 158 GLU GLU A . n A 1 159 ILE 159 159 159 ILE ILE A . n A 1 160 ASP 160 160 160 ASP ASP A . n A 1 161 LEU 161 161 161 LEU LEU A . n A 1 162 ALA 162 162 162 ALA ALA A . n A 1 163 ARG 163 163 163 ARG ARG A . n A 1 164 PRO 164 164 164 PRO PRO A . n A 1 165 LYS 165 165 165 LYS LYS A . n A 1 166 GLU 166 166 166 GLU GLU A . n A 1 167 ASN 167 167 167 ASN ASN A . n A 1 168 SER 168 168 168 SER SER A . n A 1 169 ASN 169 169 169 ASN ASN A . n A 1 170 VAL 170 170 170 VAL VAL A . n A 1 171 SER 171 171 171 SER SER A . n A 1 172 GLY 172 172 172 GLY GLY A . n A 1 173 PHE 173 173 173 PHE PHE A . n A 1 174 LEU 174 174 174 LEU LEU A . n A 1 175 PRO 175 175 175 PRO PRO A . n A 1 176 VAL 176 176 176 VAL VAL A . n A 1 177 GLU 177 177 177 GLU GLU A . n A 1 178 ARG 178 178 178 ARG ARG A . n A 1 179 ALA 179 179 179 ALA ALA A . n A 1 180 TRP 180 180 180 TRP TRP A . n A 1 181 ILE 181 181 181 ILE ILE A . n A 1 182 ASP 182 182 182 ASP ASP A . n A 1 183 LYS 183 183 183 LYS LYS A . n A 1 184 PHE 184 184 184 PHE PHE A . n A 1 185 ILE 185 185 185 ILE ILE A . n A 1 186 GLU 186 186 186 GLU GLU A . n A 1 187 ASN 187 187 187 ASN ASN A . n A 1 188 GLY 188 188 188 GLY GLY A . n A 1 189 TYR 189 189 189 TYR TYR A . n A 1 190 VAL 190 190 190 VAL VAL A . n A 1 191 ASP 191 191 191 ASP ASP A . n A 1 192 THR 192 192 192 THR THR A . n A 1 193 PHE 193 193 193 PHE PHE A . n A 1 194 ARG 194 194 194 ARG ARG A . n A 1 195 MET 195 195 195 MET MET A . n A 1 196 PHE 196 196 196 PHE PHE A . n A 1 197 ASN 197 197 197 ASN ASN A . n A 1 198 SER 198 198 198 SER SER A . n A 1 199 ASP 199 199 199 ASP ASP A . n A 1 200 PRO 200 200 200 PRO PRO A . n A 1 201 GLY 201 201 201 GLY GLY A . n A 1 202 GLN 202 202 202 GLN GLN A . n A 1 203 TYR 203 203 203 TYR TYR A . n A 1 204 THR 204 204 204 THR THR A . n A 1 205 TRP 205 205 205 TRP TRP A . n A 1 206 TRP 206 206 206 TRP TRP A . n A 1 207 SER 207 207 207 SER SER A . n A 1 208 TYR 208 208 208 TYR TYR A . n A 1 209 ARG 209 209 209 ARG ARG A . n A 1 210 THR 210 210 210 THR THR A . n A 1 211 ARG 211 211 211 ARG ARG A . n A 1 212 ALA 212 212 212 ALA ALA A . n A 1 213 ARG 213 213 213 ARG ARG A . n A 1 214 GLU 214 214 214 GLU GLU A . n A 1 215 ARG 215 215 215 ARG ARG A . n A 1 216 ASN 216 216 216 ASN ASN A . n A 1 217 VAL 217 217 217 VAL VAL A . n A 1 218 GLY 218 218 218 GLY GLY A . n A 1 219 TRP 219 219 219 TRP TRP A . n A 1 220 ARG 220 220 220 ARG ARG A . n A 1 221 LEU 221 221 221 LEU LEU A . n A 1 222 ASP 222 222 222 ASP ASP A . n A 1 223 TYR 223 223 223 TYR TYR A . n A 1 224 PHE 224 224 224 PHE PHE A . n A 1 225 PHE 225 225 225 PHE PHE A . n A 1 226 VAL 226 226 226 VAL VAL A . n A 1 227 ASN 227 227 227 ASN ASN A . n A 1 228 GLU 228 228 228 GLU GLU A . n A 1 229 GLU 229 229 229 GLU GLU A . n A 1 230 PHE 230 230 230 PHE PHE A . n A 1 231 LYS 231 231 231 LYS LYS A . n A 1 232 GLY 232 232 232 GLY GLY A . n A 1 233 LYS 233 233 233 LYS LYS A . n A 1 234 VAL 234 234 234 VAL VAL A . n A 1 235 LYS 235 235 235 LYS LYS A . n A 1 236 ARG 236 236 236 ARG ARG A . n A 1 237 SER 237 237 237 SER SER A . n A 1 238 TRP 238 238 238 TRP TRP A . n A 1 239 ILE 239 239 239 ILE ILE A . n A 1 240 LEU 240 240 240 LEU LEU A . n A 1 241 SER 241 241 241 SER SER A . n A 1 242 ASP 242 242 242 ASP ASP A . n A 1 243 VAL 243 243 243 VAL VAL A . n A 1 244 MET 244 244 244 MET MET A . n A 1 245 GLY 245 245 245 GLY GLY A . n A 1 246 SER 246 246 246 SER SER A . n A 1 247 ASP 247 247 247 ASP ASP A . n A 1 248 HIS 248 248 248 HIS HIS A . n A 1 249 CYS 249 249 249 CYS CYS A . n A 1 250 PRO 250 250 250 PRO PRO A . n A 1 251 ILE 251 251 251 ILE ILE A . n A 1 252 GLY 252 252 252 GLY GLY A . n A 1 253 LEU 253 253 253 LEU LEU A . n A 1 254 GLU 254 254 254 GLU GLU A . n A 1 255 ILE 255 255 255 ILE ILE A . n A 1 256 GLU 256 256 256 GLU GLU A . n A 1 257 LEU 257 257 ? ? ? A . n A 1 258 LEU 258 258 ? ? ? A . n A 1 259 GLU 259 259 ? ? ? A . n A 1 260 HIS 260 260 ? ? ? A . n A 1 261 HIS 261 261 ? ? ? A . n A 1 262 HIS 262 262 ? ? ? A . n A 1 263 HIS 263 263 ? ? ? A . n A 1 264 HIS 264 264 ? ? ? A . n A 1 265 HIS 265 265 ? ? ? A . n B 1 1 MET 1 1 1 MET MET B . n B 1 2 ALA 2 2 2 ALA ALA B . n B 1 3 VAL 3 3 3 VAL VAL B . n B 1 4 LEU 4 4 4 LEU LEU B . n B 1 5 LYS 5 5 5 LYS LYS B . n B 1 6 ILE 6 6 6 ILE ILE B . n B 1 7 ILE 7 7 7 ILE ILE B . n B 1 8 SER 8 8 8 SER SER B . n B 1 9 TRP 9 9 9 TRP TRP B . n B 1 10 ASN 10 10 10 ASN ASN B . n B 1 11 VAL 11 11 11 VAL VAL B . n B 1 12 ASN 12 12 12 ASN ASN B . n B 1 13 GLY 13 13 13 GLY GLY B . n B 1 14 LEU 14 14 14 LEU LEU B . n B 1 15 ARG 15 15 15 ARG ARG B . n B 1 16 ALA 16 16 16 ALA ALA B . n B 1 17 VAL 17 17 17 VAL VAL B . n B 1 18 HIS 18 18 18 HIS HIS B . n B 1 19 ARG 19 19 19 ARG ARG B . n B 1 20 LYS 20 20 20 LYS LYS B . n B 1 21 GLY 21 21 21 GLY GLY B . n B 1 22 PHE 22 22 22 PHE PHE B . n B 1 23 LEU 23 23 23 LEU LEU B . n B 1 24 LYS 24 24 24 LYS LYS B . n B 1 25 TRP 25 25 25 TRP TRP B . n B 1 26 PHE 26 26 26 PHE PHE B . n B 1 27 MET 27 27 27 MET MET B . n B 1 28 GLU 28 28 28 GLU GLU B . n B 1 29 GLU 29 29 29 GLU GLU B . n B 1 30 LYS 30 30 30 LYS LYS B . n B 1 31 PRO 31 31 31 PRO PRO B . n B 1 32 ASP 32 32 32 ASP ASP B . n B 1 33 ILE 33 33 33 ILE ILE B . n B 1 34 LEU 34 34 34 LEU LEU B . n B 1 35 CYS 35 35 35 CYS CYS B . n B 1 36 LEU 36 36 36 LEU LEU B . n B 1 37 GLN 37 37 37 GLN GLN B . n B 1 38 GLU 38 38 38 GLU GLU B . n B 1 39 ILE 39 39 39 ILE ILE B . n B 1 40 LYS 40 40 40 LYS LYS B . n B 1 41 ALA 41 41 41 ALA ALA B . n B 1 42 ALA 42 42 42 ALA ALA B . n B 1 43 PRO 43 43 43 PRO PRO B . n B 1 44 GLU 44 44 44 GLU GLU B . n B 1 45 GLN 45 45 45 GLN GLN B . n B 1 46 LEU 46 46 46 LEU LEU B . n B 1 47 PRO 47 47 47 PRO PRO B . n B 1 48 ARG 48 48 48 ARG ARG B . n B 1 49 LYS 49 49 49 LYS LYS B . n B 1 50 LEU 50 50 50 LEU LEU B . n B 1 51 ARG 51 51 51 ARG ARG B . n B 1 52 HIS 52 52 52 HIS HIS B . n B 1 53 VAL 53 53 53 VAL VAL B . n B 1 54 GLU 54 54 54 GLU GLU B . n B 1 55 GLY 55 55 55 GLY GLY B . n B 1 56 TYR 56 56 56 TYR TYR B . n B 1 57 ARG 57 57 57 ARG ARG B . n B 1 58 SER 58 58 58 SER SER B . n B 1 59 PHE 59 59 59 PHE PHE B . n B 1 60 PHE 60 60 60 PHE PHE B . n B 1 61 THR 61 61 61 THR THR B . n B 1 62 PRO 62 62 62 PRO PRO B . n B 1 63 ALA 63 63 63 ALA ALA B . n B 1 64 GLU 64 64 64 GLU GLU B . n B 1 65 ARG 65 65 65 ARG ARG B . n B 1 66 LYS 66 66 66 LYS LYS B . n B 1 67 GLY 67 67 67 GLY GLY B . n B 1 68 TYR 68 68 68 TYR TYR B . n B 1 69 SER 69 69 69 SER SER B . n B 1 70 GLY 70 70 70 GLY GLY B . n B 1 71 VAL 71 71 71 VAL VAL B . n B 1 72 ALA 72 72 72 ALA ALA B . n B 1 73 MET 73 73 73 MET MET B . n B 1 74 TYR 74 74 74 TYR TYR B . n B 1 75 THR 75 75 75 THR THR B . n B 1 76 LYS 76 76 76 LYS LYS B . n B 1 77 VAL 77 77 77 VAL VAL B . n B 1 78 PRO 78 78 78 PRO PRO B . n B 1 79 PRO 79 79 79 PRO PRO B . n B 1 80 SER 80 80 80 SER SER B . n B 1 81 SER 81 81 81 SER SER B . n B 1 82 LEU 82 82 82 LEU LEU B . n B 1 83 ARG 83 83 83 ARG ARG B . n B 1 84 GLU 84 84 84 GLU GLU B . n B 1 85 GLY 85 85 85 GLY GLY B . n B 1 86 PHE 86 86 86 PHE PHE B . n B 1 87 GLY 87 87 87 GLY GLY B . n B 1 88 VAL 88 88 88 VAL VAL B . n B 1 89 GLU 89 89 89 GLU GLU B . n B 1 90 ARG 90 90 90 ARG ARG B . n B 1 91 PHE 91 91 91 PHE PHE B . n B 1 92 ASP 92 92 92 ASP ASP B . n B 1 93 THR 93 93 93 THR THR B . n B 1 94 GLU 94 94 94 GLU GLU B . n B 1 95 GLY 95 95 95 GLY GLY B . n B 1 96 ARG 96 96 96 ARG ARG B . n B 1 97 ILE 97 97 97 ILE ILE B . n B 1 98 GLN 98 98 98 GLN GLN B . n B 1 99 ILE 99 99 99 ILE ILE B . n B 1 100 ALA 100 100 100 ALA ALA B . n B 1 101 ASP 101 101 101 ASP ASP B . n B 1 102 PHE 102 102 102 PHE PHE B . n B 1 103 ASP 103 103 103 ASP ASP B . n B 1 104 ASP 104 104 104 ASP ASP B . n B 1 105 PHE 105 105 105 PHE PHE B . n B 1 106 LEU 106 106 106 LEU LEU B . n B 1 107 LEU 107 107 107 LEU LEU B . n B 1 108 TYR 108 108 108 TYR TYR B . n B 1 109 ASN 109 109 109 ASN ASN B . n B 1 110 ILE 110 110 110 ILE ILE B . n B 1 111 TYR 111 111 111 TYR TYR B . n B 1 112 PHE 112 112 112 PHE PHE B . n B 1 113 PRO 113 113 113 PRO PRO B . n B 1 114 ASN 114 114 114 ASN ASN B . n B 1 115 GLY 115 115 115 GLY GLY B . n B 1 116 LYS 116 116 116 LYS LYS B . n B 1 117 MET 117 117 117 MET MET B . n B 1 118 SER 118 118 118 SER SER B . n B 1 119 GLU 119 119 119 GLU GLU B . n B 1 120 GLU 120 120 120 GLU GLU B . n B 1 121 ARG 121 121 121 ARG ARG B . n B 1 122 LEU 122 122 122 LEU LEU B . n B 1 123 LYS 123 123 123 LYS LYS B . n B 1 124 TYR 124 124 124 TYR TYR B . n B 1 125 LYS 125 125 125 LYS LYS B . n B 1 126 LEU 126 126 126 LEU LEU B . n B 1 127 GLU 127 127 127 GLU GLU B . n B 1 128 PHE 128 128 128 PHE PHE B . n B 1 129 TYR 129 129 129 TYR TYR B . n B 1 130 ASP 130 130 130 ASP ASP B . n B 1 131 ALA 131 131 131 ALA ALA B . n B 1 132 PHE 132 132 132 PHE PHE B . n B 1 133 LEU 133 133 133 LEU LEU B . n B 1 134 GLU 134 134 134 GLU GLU B . n B 1 135 ASP 135 135 135 ASP ASP B . n B 1 136 VAL 136 136 136 VAL VAL B . n B 1 137 ASN 137 137 137 ASN ASN B . n B 1 138 ARG 138 138 138 ARG ARG B . n B 1 139 GLU 139 139 139 GLU GLU B . n B 1 140 ARG 140 140 140 ARG ARG B . n B 1 141 ASP 141 141 141 ASP ASP B . n B 1 142 SER 142 142 142 SER SER B . n B 1 143 GLY 143 143 143 GLY GLY B . n B 1 144 ARG 144 144 144 ARG ARG B . n B 1 145 ASN 145 145 145 ASN ASN B . n B 1 146 VAL 146 146 146 VAL VAL B . n B 1 147 ILE 147 147 147 ILE ILE B . n B 1 148 ILE 148 148 148 ILE ILE B . n B 1 149 CYS 149 149 149 CYS CYS B . n B 1 150 GLY 150 150 150 GLY GLY B . n B 1 151 ASP 151 151 151 ASP ASP B . n B 1 152 PHE 152 152 152 PHE PHE B . n B 1 153 ASN 153 153 153 ASN ASN B . n B 1 154 THR 154 154 154 THR THR B . n B 1 155 ALA 155 155 155 ALA ALA B . n B 1 156 HIS 156 156 156 HIS HIS B . n B 1 157 ARG 157 157 157 ARG ARG B . n B 1 158 GLU 158 158 158 GLU GLU B . n B 1 159 ILE 159 159 159 ILE ILE B . n B 1 160 ASP 160 160 160 ASP ASP B . n B 1 161 LEU 161 161 161 LEU LEU B . n B 1 162 ALA 162 162 162 ALA ALA B . n B 1 163 ARG 163 163 163 ARG ARG B . n B 1 164 PRO 164 164 164 PRO PRO B . n B 1 165 LYS 165 165 165 LYS LYS B . n B 1 166 GLU 166 166 166 GLU GLU B . n B 1 167 ASN 167 167 167 ASN ASN B . n B 1 168 SER 168 168 168 SER SER B . n B 1 169 ASN 169 169 169 ASN ASN B . n B 1 170 VAL 170 170 170 VAL VAL B . n B 1 171 SER 171 171 171 SER SER B . n B 1 172 GLY 172 172 172 GLY GLY B . n B 1 173 PHE 173 173 173 PHE PHE B . n B 1 174 LEU 174 174 174 LEU LEU B . n B 1 175 PRO 175 175 175 PRO PRO B . n B 1 176 VAL 176 176 176 VAL VAL B . n B 1 177 GLU 177 177 177 GLU GLU B . n B 1 178 ARG 178 178 178 ARG ARG B . n B 1 179 ALA 179 179 179 ALA ALA B . n B 1 180 TRP 180 180 180 TRP TRP B . n B 1 181 ILE 181 181 181 ILE ILE B . n B 1 182 ASP 182 182 182 ASP ASP B . n B 1 183 LYS 183 183 183 LYS LYS B . n B 1 184 PHE 184 184 184 PHE PHE B . n B 1 185 ILE 185 185 185 ILE ILE B . n B 1 186 GLU 186 186 186 GLU GLU B . n B 1 187 ASN 187 187 187 ASN ASN B . n B 1 188 GLY 188 188 188 GLY GLY B . n B 1 189 TYR 189 189 189 TYR TYR B . n B 1 190 VAL 190 190 190 VAL VAL B . n B 1 191 ASP 191 191 191 ASP ASP B . n B 1 192 THR 192 192 192 THR THR B . n B 1 193 PHE 193 193 193 PHE PHE B . n B 1 194 ARG 194 194 194 ARG ARG B . n B 1 195 MET 195 195 195 MET MET B . n B 1 196 PHE 196 196 196 PHE PHE B . n B 1 197 ASN 197 197 197 ASN ASN B . n B 1 198 SER 198 198 198 SER SER B . n B 1 199 ASP 199 199 199 ASP ASP B . n B 1 200 PRO 200 200 200 PRO PRO B . n B 1 201 GLY 201 201 201 GLY GLY B . n B 1 202 GLN 202 202 202 GLN GLN B . n B 1 203 TYR 203 203 203 TYR TYR B . n B 1 204 THR 204 204 204 THR THR B . n B 1 205 TRP 205 205 205 TRP TRP B . n B 1 206 TRP 206 206 206 TRP TRP B . n B 1 207 SER 207 207 207 SER SER B . n B 1 208 TYR 208 208 208 TYR TYR B . n B 1 209 ARG 209 209 209 ARG ARG B . n B 1 210 THR 210 210 210 THR THR B . n B 1 211 ARG 211 211 211 ARG ARG B . n B 1 212 ALA 212 212 212 ALA ALA B . n B 1 213 ARG 213 213 213 ARG ARG B . n B 1 214 GLU 214 214 214 GLU GLU B . n B 1 215 ARG 215 215 215 ARG ARG B . n B 1 216 ASN 216 216 216 ASN ASN B . n B 1 217 VAL 217 217 217 VAL VAL B . n B 1 218 GLY 218 218 218 GLY GLY B . n B 1 219 TRP 219 219 219 TRP TRP B . n B 1 220 ARG 220 220 220 ARG ARG B . n B 1 221 LEU 221 221 221 LEU LEU B . n B 1 222 ASP 222 222 222 ASP ASP B . n B 1 223 TYR 223 223 223 TYR TYR B . n B 1 224 PHE 224 224 224 PHE PHE B . n B 1 225 PHE 225 225 225 PHE PHE B . n B 1 226 VAL 226 226 226 VAL VAL B . n B 1 227 ASN 227 227 227 ASN ASN B . n B 1 228 GLU 228 228 228 GLU GLU B . n B 1 229 GLU 229 229 229 GLU GLU B . n B 1 230 PHE 230 230 230 PHE PHE B . n B 1 231 LYS 231 231 231 LYS LYS B . n B 1 232 GLY 232 232 232 GLY GLY B . n B 1 233 LYS 233 233 233 LYS LYS B . n B 1 234 VAL 234 234 234 VAL VAL B . n B 1 235 LYS 235 235 235 LYS LYS B . n B 1 236 ARG 236 236 236 ARG ARG B . n B 1 237 SER 237 237 237 SER SER B . n B 1 238 TRP 238 238 238 TRP TRP B . n B 1 239 ILE 239 239 239 ILE ILE B . n B 1 240 LEU 240 240 240 LEU LEU B . n B 1 241 SER 241 241 241 SER SER B . n B 1 242 ASP 242 242 242 ASP ASP B . n B 1 243 VAL 243 243 243 VAL VAL B . n B 1 244 MET 244 244 244 MET MET B . n B 1 245 GLY 245 245 245 GLY GLY B . n B 1 246 SER 246 246 246 SER SER B . n B 1 247 ASP 247 247 247 ASP ASP B . n B 1 248 HIS 248 248 248 HIS HIS B . n B 1 249 CYS 249 249 249 CYS CYS B . n B 1 250 PRO 250 250 250 PRO PRO B . n B 1 251 ILE 251 251 251 ILE ILE B . n B 1 252 GLY 252 252 252 GLY GLY B . n B 1 253 LEU 253 253 253 LEU LEU B . n B 1 254 GLU 254 254 254 GLU GLU B . n B 1 255 ILE 255 255 255 ILE ILE B . n B 1 256 GLU 256 256 ? ? ? B . n B 1 257 LEU 257 257 ? ? ? B . n B 1 258 LEU 258 258 ? ? ? B . n B 1 259 GLU 259 259 ? ? ? B . n B 1 260 HIS 260 260 ? ? ? B . n B 1 261 HIS 261 261 ? ? ? B . n B 1 262 HIS 262 262 ? ? ? B . n B 1 263 HIS 263 263 ? ? ? B . n B 1 264 HIS 264 264 ? ? ? B . n B 1 265 HIS 265 265 ? ? ? B . n C 2 1 DC 1 1 1 DC DC H . n C 2 2 DG 2 2 2 DG DG H . n C 2 3 DT 3 3 3 DT DT H . n C 2 4 DA 4 4 4 DA DA H . n C 2 5 UPS 5 5 5 UPS UPS H . n C 2 6 DT 6 6 6 DT DT H . n C 2 7 DA 7 7 7 DA DA H . n C 2 8 DC 8 8 ? ? ? H . n C 2 9 DG 9 9 ? ? ? H . n D 3 1 DC 1 1 ? ? ? I . n D 3 2 DG 2 2 ? ? ? I . n D 3 3 DT 3 3 3 DT DT I . n D 3 4 DA 4 4 4 DA DA I . n D 3 5 DC 5 5 5 DC DC I . n D 3 6 DT 6 6 6 DT DT I . n D 3 7 DA 7 7 7 DA DA I . n D 3 8 DC 8 8 8 DC DC I . n D 3 9 DG 9 9 9 DG DG I . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 PO4 1 266 1 PO4 PO4 A . F 5 MG 1 267 1 MG MG A . G 4 PO4 1 266 2 PO4 PO4 B . H 5 MG 1 267 1 MG MG B . I 4 PO4 1 10 3 PO4 PO4 I . J 6 HOH 1 268 5 HOH HOH A . J 6 HOH 2 269 8 HOH HOH A . J 6 HOH 3 270 14 HOH HOH A . J 6 HOH 4 271 17 HOH HOH A . J 6 HOH 5 272 1 HOH HOH A . J 6 HOH 6 273 2 HOH HOH A . J 6 HOH 7 274 3 HOH HOH A . J 6 HOH 8 275 5 HOH HOH A . J 6 HOH 9 276 7 HOH HOH A . J 6 HOH 10 277 8 HOH HOH A . J 6 HOH 11 278 10 HOH HOH A . J 6 HOH 12 279 11 HOH HOH A . J 6 HOH 13 280 12 HOH HOH A . K 6 HOH 1 268 7 HOH HOH B . K 6 HOH 2 269 4 HOH HOH B . L 6 HOH 1 10 1 HOH HOH H . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id C _pdbx_struct_mod_residue.label_comp_id UPS _pdbx_struct_mod_residue.label_seq_id 5 _pdbx_struct_mod_residue.auth_asym_id H _pdbx_struct_mod_residue.auth_comp_id UPS _pdbx_struct_mod_residue.auth_seq_id 5 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DU _pdbx_struct_mod_residue.details "2'-DEOXY-5'-O-THIOPHOSPHONOURIDINE" # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5150 ? 1 MORE -49 ? 1 'SSA (A^2)' 22480 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE2 ? A GLU 38 ? A GLU 38 ? 1_555 MG ? F MG . ? A MG 267 ? 1_555 O4 ? E PO4 . ? A PO4 266 ? 1_555 77.7 ? 2 OE2 ? A GLU 38 ? A GLU 38 ? 1_555 MG ? F MG . ? A MG 267 ? 1_555 "O3'" ? C DA 7 ? H DA 7 ? 1_555 63.4 ? 3 O4 ? E PO4 . ? A PO4 266 ? 1_555 MG ? F MG . ? A MG 267 ? 1_555 "O3'" ? C DA 7 ? H DA 7 ? 1_555 61.1 ? 4 OE2 ? B GLU 38 ? B GLU 38 ? 1_555 MG ? H MG . ? B MG 267 ? 1_555 O4 ? G PO4 . ? B PO4 266 ? 1_555 64.5 ? 5 OE2 ? B GLU 38 ? B GLU 38 ? 1_555 MG ? H MG . ? B MG 267 ? 1_555 "O3'" ? D DG 9 ? I DG 9 ? 1_555 60.8 ? 6 O4 ? G PO4 . ? B PO4 266 ? 1_555 MG ? H MG . ? B MG 267 ? 1_555 "O3'" ? D DG 9 ? I DG 9 ? 1_555 59.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-03-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2014-02-12 4 'Structure model' 1 3 2017-11-01 5 'Structure model' 1 4 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' pdbx_struct_conn_angle 7 5 'Structure model' struct_conn 8 5 'Structure model' struct_ncs_dom_lim 9 5 'Structure model' struct_ref_seq_dif 10 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.value' 20 5 'Structure model' '_struct_conn.pdbx_dist_value' 21 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 22 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 23 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 24 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 25 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 26 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 27 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 28 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 29 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 30 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 31 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 32 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 33 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 34 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 35 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 36 5 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 37 5 'Structure model' '_struct_ncs_dom_lim.beg_label_asym_id' 38 5 'Structure model' '_struct_ncs_dom_lim.beg_label_comp_id' 39 5 'Structure model' '_struct_ncs_dom_lim.beg_label_seq_id' 40 5 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' 41 5 'Structure model' '_struct_ncs_dom_lim.end_label_asym_id' 42 5 'Structure model' '_struct_ncs_dom_lim.end_label_comp_id' 43 5 'Structure model' '_struct_ncs_dom_lim.end_label_seq_id' 44 5 'Structure model' '_struct_ref_seq_dif.details' 45 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 46 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 47 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _phasing.method MR # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 MOLREP . ? program 'Alexei Vaguine' alexei@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/molrep.html Fortran_77 ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 MAR345 . ? ? ? ? 'data collection' ? ? ? 6 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 7 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 8 # _pdbx_entry_details.entry_id 3G4T _pdbx_entry_details.compound_details ;THE 3'-END OF BOTH CHAIN I IS BOUND TO ROX 5/6 NHS MIXTURE (FLUORESCENCE DYE), WHICH IS NOT SHOWN IN THIS ENTRY. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NH1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ARG _pdbx_validate_close_contact.auth_seq_id_1 90 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OE1 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 GLU _pdbx_validate_close_contact.auth_seq_id_2 127 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.12 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 90 ? ? CZ A ARG 90 ? ? NH1 A ARG 90 ? ? 117.22 120.30 -3.08 0.50 N 2 1 NE A ARG 90 ? ? CZ A ARG 90 ? ? NH2 A ARG 90 ? ? 123.45 120.30 3.15 0.50 N 3 1 NE A ARG 236 ? ? CZ A ARG 236 ? ? NH1 A ARG 236 ? ? 124.04 120.30 3.74 0.50 N 4 1 NE A ARG 236 ? ? CZ A ARG 236 ? ? NH2 A ARG 236 ? ? 116.63 120.30 -3.67 0.50 N 5 1 NE B ARG 90 ? ? CZ B ARG 90 ? ? NH1 B ARG 90 ? ? 123.87 120.30 3.57 0.50 N 6 1 NE B ARG 90 ? ? CZ B ARG 90 ? ? NH2 B ARG 90 ? ? 117.22 120.30 -3.08 0.50 N 7 1 NE B ARG 236 ? ? CZ B ARG 236 ? ? NH1 B ARG 236 ? ? 115.84 120.30 -4.46 0.50 N 8 1 NE B ARG 236 ? ? CZ B ARG 236 ? ? NH2 B ARG 236 ? ? 123.83 120.30 3.53 0.50 N 9 1 "O4'" H DG 2 ? ? "C1'" H DG 2 ? ? N9 H DG 2 ? ? 110.26 108.30 1.96 0.30 N 10 1 "O4'" H DT 6 ? ? "C1'" H DT 6 ? ? N1 H DT 6 ? ? 111.75 108.30 3.45 0.30 N 11 1 "C3'" H DT 6 ? ? "O3'" H DT 6 ? ? P H DA 7 ? ? 127.33 119.70 7.63 1.20 Y 12 1 "O4'" H DA 7 ? ? "C1'" H DA 7 ? ? N9 H DA 7 ? ? 110.80 108.30 2.50 0.30 N 13 1 "O5'" I DC 5 ? ? "C5'" I DC 5 ? ? "C4'" I DC 5 ? ? 104.04 109.40 -5.36 0.80 N 14 1 "O4'" I DT 6 ? ? "C1'" I DT 6 ? ? N1 I DT 6 ? ? 114.06 108.30 5.76 0.30 N 15 1 "O4'" I DA 7 ? ? "C1'" I DA 7 ? ? N9 I DA 7 ? ? 111.20 108.30 2.90 0.30 N 16 1 "C3'" I DA 7 ? ? "O3'" I DA 7 ? ? P I DC 8 ? ? 129.19 119.70 9.49 1.20 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 69 ? ? 54.67 -142.56 2 1 ASP A 103 ? ? 69.61 -75.79 3 1 ARG A 163 ? ? -113.89 69.93 4 1 PHE A 173 ? ? -145.71 19.82 5 1 SER B 69 ? ? 53.84 -138.19 6 1 ASP B 103 ? ? 64.20 -73.30 7 1 ARG B 163 ? ? -115.24 76.60 8 1 PHE B 173 ? ? -148.71 17.14 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 I DT 3 ? P ? D DT 3 P 2 1 Y 1 I DT 3 ? OP1 ? D DT 3 OP1 3 1 Y 1 I DT 3 ? OP2 ? D DT 3 OP2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A LEU 257 ? A LEU 257 4 1 Y 1 A LEU 258 ? A LEU 258 5 1 Y 1 A GLU 259 ? A GLU 259 6 1 Y 1 A HIS 260 ? A HIS 260 7 1 Y 1 A HIS 261 ? A HIS 261 8 1 Y 1 A HIS 262 ? A HIS 262 9 1 Y 1 A HIS 263 ? A HIS 263 10 1 Y 1 A HIS 264 ? A HIS 264 11 1 Y 1 A HIS 265 ? A HIS 265 12 1 Y 1 B GLU 256 ? B GLU 256 13 1 Y 1 B LEU 257 ? B LEU 257 14 1 Y 1 B LEU 258 ? B LEU 258 15 1 Y 1 B GLU 259 ? B GLU 259 16 1 Y 1 B HIS 260 ? B HIS 260 17 1 Y 1 B HIS 261 ? B HIS 261 18 1 Y 1 B HIS 262 ? B HIS 262 19 1 Y 1 B HIS 263 ? B HIS 263 20 1 Y 1 B HIS 264 ? B HIS 264 21 1 Y 1 B HIS 265 ? B HIS 265 22 1 Y 1 H DC 8 ? C DC 8 23 1 Y 1 H DG 9 ? C DG 9 24 1 Y 1 I DC 1 ? D DC 1 25 1 Y 1 I DG 2 ? D DG 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 MG MG MG N N 393 PHE N N N N 394 PHE CA C N S 395 PHE C C N N 396 PHE O O N N 397 PHE CB C N N 398 PHE CG C Y N 399 PHE CD1 C Y N 400 PHE CD2 C Y N 401 PHE CE1 C Y N 402 PHE CE2 C Y N 403 PHE CZ C Y N 404 PHE OXT O N N 405 PHE H H N N 406 PHE H2 H N N 407 PHE HA H N N 408 PHE HB2 H N N 409 PHE HB3 H N N 410 PHE HD1 H N N 411 PHE HD2 H N N 412 PHE HE1 H N N 413 PHE HE2 H N N 414 PHE HZ H N N 415 PHE HXT H N N 416 PO4 P P N N 417 PO4 O1 O N N 418 PO4 O2 O N N 419 PO4 O3 O N N 420 PO4 O4 O N N 421 PRO N N N N 422 PRO CA C N S 423 PRO C C N N 424 PRO O O N N 425 PRO CB C N N 426 PRO CG C N N 427 PRO CD C N N 428 PRO OXT O N N 429 PRO H H N N 430 PRO HA H N N 431 PRO HB2 H N N 432 PRO HB3 H N N 433 PRO HG2 H N N 434 PRO HG3 H N N 435 PRO HD2 H N N 436 PRO HD3 H N N 437 PRO HXT H N N 438 SER N N N N 439 SER CA C N S 440 SER C C N N 441 SER O O N N 442 SER CB C N N 443 SER OG O N N 444 SER OXT O N N 445 SER H H N N 446 SER H2 H N N 447 SER HA H N N 448 SER HB2 H N N 449 SER HB3 H N N 450 SER HG H N N 451 SER HXT H N N 452 THR N N N N 453 THR CA C N S 454 THR C C N N 455 THR O O N N 456 THR CB C N R 457 THR OG1 O N N 458 THR CG2 C N N 459 THR OXT O N N 460 THR H H N N 461 THR H2 H N N 462 THR HA H N N 463 THR HB H N N 464 THR HG1 H N N 465 THR HG21 H N N 466 THR HG22 H N N 467 THR HG23 H N N 468 THR HXT H N N 469 TRP N N N N 470 TRP CA C N S 471 TRP C C N N 472 TRP O O N N 473 TRP CB C N N 474 TRP CG C Y N 475 TRP CD1 C Y N 476 TRP CD2 C Y N 477 TRP NE1 N Y N 478 TRP CE2 C Y N 479 TRP CE3 C Y N 480 TRP CZ2 C Y N 481 TRP CZ3 C Y N 482 TRP CH2 C Y N 483 TRP OXT O N N 484 TRP H H N N 485 TRP H2 H N N 486 TRP HA H N N 487 TRP HB2 H N N 488 TRP HB3 H N N 489 TRP HD1 H N N 490 TRP HE1 H N N 491 TRP HE3 H N N 492 TRP HZ2 H N N 493 TRP HZ3 H N N 494 TRP HH2 H N N 495 TRP HXT H N N 496 TYR N N N N 497 TYR CA C N S 498 TYR C C N N 499 TYR O O N N 500 TYR CB C N N 501 TYR CG C Y N 502 TYR CD1 C Y N 503 TYR CD2 C Y N 504 TYR CE1 C Y N 505 TYR CE2 C Y N 506 TYR CZ C Y N 507 TYR OH O N N 508 TYR OXT O N N 509 TYR H H N N 510 TYR H2 H N N 511 TYR HA H N N 512 TYR HB2 H N N 513 TYR HB3 H N N 514 TYR HD1 H N N 515 TYR HD2 H N N 516 TYR HE1 H N N 517 TYR HE2 H N N 518 TYR HH H N N 519 TYR HXT H N N 520 UPS OP3 O N N 521 UPS P P N N 522 UPS S1P S N N 523 UPS OP2 O N N 524 UPS "O5'" O N N 525 UPS "C5'" C N N 526 UPS "C4'" C N R 527 UPS "O4'" O N N 528 UPS "C1'" C N R 529 UPS N1 N N N 530 UPS C2 C N N 531 UPS O2 O N N 532 UPS N3 N N N 533 UPS C4 C N N 534 UPS O4 O N N 535 UPS C5 C N N 536 UPS C6 C N N 537 UPS "C2'" C N N 538 UPS "C3'" C N S 539 UPS "O3'" O N N 540 UPS HOP3 H N N 541 UPS HOP2 H N N 542 UPS "H5'" H N N 543 UPS "H5'A" H N N 544 UPS "H4'" H N N 545 UPS "H1'" H N N 546 UPS H5 H N N 547 UPS H6 H N N 548 UPS "H2'" H N N 549 UPS "H2'A" H N N 550 UPS "H3'" H N N 551 UPS "HO3'" H N N 552 UPS HN3 H N N 553 VAL N N N N 554 VAL CA C N S 555 VAL C C N N 556 VAL O O N N 557 VAL CB C N N 558 VAL CG1 C N N 559 VAL CG2 C N N 560 VAL OXT O N N 561 VAL H H N N 562 VAL H2 H N N 563 VAL HA H N N 564 VAL HB H N N 565 VAL HG11 H N N 566 VAL HG12 H N N 567 VAL HG13 H N N 568 VAL HG21 H N N 569 VAL HG22 H N N 570 VAL HG23 H N N 571 VAL HXT H N N 572 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PO4 P O1 doub N N 409 PO4 P O2 sing N N 410 PO4 P O3 sing N N 411 PO4 P O4 sing N N 412 PRO N CA sing N N 413 PRO N CD sing N N 414 PRO N H sing N N 415 PRO CA C sing N N 416 PRO CA CB sing N N 417 PRO CA HA sing N N 418 PRO C O doub N N 419 PRO C OXT sing N N 420 PRO CB CG sing N N 421 PRO CB HB2 sing N N 422 PRO CB HB3 sing N N 423 PRO CG CD sing N N 424 PRO CG HG2 sing N N 425 PRO CG HG3 sing N N 426 PRO CD HD2 sing N N 427 PRO CD HD3 sing N N 428 PRO OXT HXT sing N N 429 SER N CA sing N N 430 SER N H sing N N 431 SER N H2 sing N N 432 SER CA C sing N N 433 SER CA CB sing N N 434 SER CA HA sing N N 435 SER C O doub N N 436 SER C OXT sing N N 437 SER CB OG sing N N 438 SER CB HB2 sing N N 439 SER CB HB3 sing N N 440 SER OG HG sing N N 441 SER OXT HXT sing N N 442 THR N CA sing N N 443 THR N H sing N N 444 THR N H2 sing N N 445 THR CA C sing N N 446 THR CA CB sing N N 447 THR CA HA sing N N 448 THR C O doub N N 449 THR C OXT sing N N 450 THR CB OG1 sing N N 451 THR CB CG2 sing N N 452 THR CB HB sing N N 453 THR OG1 HG1 sing N N 454 THR CG2 HG21 sing N N 455 THR CG2 HG22 sing N N 456 THR CG2 HG23 sing N N 457 THR OXT HXT sing N N 458 TRP N CA sing N N 459 TRP N H sing N N 460 TRP N H2 sing N N 461 TRP CA C sing N N 462 TRP CA CB sing N N 463 TRP CA HA sing N N 464 TRP C O doub N N 465 TRP C OXT sing N N 466 TRP CB CG sing N N 467 TRP CB HB2 sing N N 468 TRP CB HB3 sing N N 469 TRP CG CD1 doub Y N 470 TRP CG CD2 sing Y N 471 TRP CD1 NE1 sing Y N 472 TRP CD1 HD1 sing N N 473 TRP CD2 CE2 doub Y N 474 TRP CD2 CE3 sing Y N 475 TRP NE1 CE2 sing Y N 476 TRP NE1 HE1 sing N N 477 TRP CE2 CZ2 sing Y N 478 TRP CE3 CZ3 doub Y N 479 TRP CE3 HE3 sing N N 480 TRP CZ2 CH2 doub Y N 481 TRP CZ2 HZ2 sing N N 482 TRP CZ3 CH2 sing Y N 483 TRP CZ3 HZ3 sing N N 484 TRP CH2 HH2 sing N N 485 TRP OXT HXT sing N N 486 TYR N CA sing N N 487 TYR N H sing N N 488 TYR N H2 sing N N 489 TYR CA C sing N N 490 TYR CA CB sing N N 491 TYR CA HA sing N N 492 TYR C O doub N N 493 TYR C OXT sing N N 494 TYR CB CG sing N N 495 TYR CB HB2 sing N N 496 TYR CB HB3 sing N N 497 TYR CG CD1 doub Y N 498 TYR CG CD2 sing Y N 499 TYR CD1 CE1 sing Y N 500 TYR CD1 HD1 sing N N 501 TYR CD2 CE2 doub Y N 502 TYR CD2 HD2 sing N N 503 TYR CE1 CZ doub Y N 504 TYR CE1 HE1 sing N N 505 TYR CE2 CZ sing Y N 506 TYR CE2 HE2 sing N N 507 TYR CZ OH sing N N 508 TYR OH HH sing N N 509 TYR OXT HXT sing N N 510 UPS P OP3 sing N N 511 UPS S1P P doub N N 512 UPS P OP2 sing N N 513 UPS P "O5'" sing N N 514 UPS OP3 HOP3 sing N N 515 UPS OP2 HOP2 sing N N 516 UPS "C5'" "O5'" sing N N 517 UPS "C5'" "C4'" sing N N 518 UPS "C5'" "H5'" sing N N 519 UPS "C5'" "H5'A" sing N N 520 UPS "C4'" "C3'" sing N N 521 UPS "C4'" "O4'" sing N N 522 UPS "C4'" "H4'" sing N N 523 UPS "O4'" "C1'" sing N N 524 UPS "C2'" "C1'" sing N N 525 UPS "C1'" N1 sing N N 526 UPS "C1'" "H1'" sing N N 527 UPS N1 C6 sing N N 528 UPS N1 C2 sing N N 529 UPS O2 C2 doub N N 530 UPS C2 N3 sing N N 531 UPS N3 C4 sing N N 532 UPS C5 C4 sing N N 533 UPS C4 O4 doub N N 534 UPS C6 C5 doub N N 535 UPS C5 H5 sing N N 536 UPS C6 H6 sing N N 537 UPS "C3'" "C2'" sing N N 538 UPS "C2'" "H2'" sing N N 539 UPS "C2'" "H2'A" sing N N 540 UPS "O3'" "C3'" sing N N 541 UPS "C3'" "H3'" sing N N 542 UPS "O3'" "HO3'" sing N N 543 UPS N3 HN3 sing N N 544 VAL N CA sing N N 545 VAL N H sing N N 546 VAL N H2 sing N N 547 VAL CA C sing N N 548 VAL CA CB sing N N 549 VAL CA HA sing N N 550 VAL C O doub N N 551 VAL C OXT sing N N 552 VAL CB CG1 sing N N 553 VAL CB CG2 sing N N 554 VAL CB HB sing N N 555 VAL CG1 HG11 sing N N 556 VAL CG1 HG12 sing N N 557 VAL CG1 HG13 sing N N 558 VAL CG2 HG21 sing N N 559 VAL CG2 HG22 sing N N 560 VAL CG2 HG23 sing N N 561 VAL OXT HXT sing N N 562 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3G4T 'b-form double helix' 3G4T 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DC 1 1_555 D DG 9 1_555 -0.092 0.104 -0.389 6.888 -10.136 10.284 1 H_DC1:DG9_I H 1 ? I 9 ? 19 1 1 C DG 2 1_555 D DC 8 1_555 -0.445 -0.487 0.099 -2.688 -8.043 -2.184 2 H_DG2:DC8_I H 2 ? I 8 ? 19 1 1 C DT 3 1_555 D DA 7 1_555 -0.314 -0.440 -0.104 5.367 -7.585 -4.424 3 H_DT3:DA7_I H 3 ? I 7 ? 20 1 1 C DA 4 1_555 D DT 6 1_555 0.536 -0.119 -0.010 1.482 -11.065 0.589 4 H_DA4:DT6_I H 4 ? I 6 ? 20 1 1 C UPS 5 1_555 D DC 5 1_555 -0.206 -0.821 -0.175 2.766 -4.382 -12.693 5 H_UPS5:DC5_I H 5 ? I 5 ? ? ? 1 C DT 6 1_555 D DA 4 1_555 -0.011 -0.321 0.027 2.068 -1.983 -1.746 6 H_DT6:DA4_I H 6 ? I 4 ? 20 1 1 C DA 7 1_555 D DT 3 1_555 0.218 -0.200 -0.268 -2.328 -11.740 2.711 7 H_DA7:DT3_I H 7 ? I 3 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DC 1 1_555 D DG 9 1_555 C DG 2 1_555 D DC 8 1_555 -0.493 -0.539 3.692 -3.517 3.758 27.652 -2.105 0.084 3.622 7.777 7.279 28.118 1 HH_DC1DG2:DC8DG9_II H 1 ? I 9 ? H 2 ? I 8 ? 1 C DG 2 1_555 D DC 8 1_555 C DT 3 1_555 D DA 7 1_555 -0.847 -0.267 3.174 0.735 3.417 30.732 -1.137 1.725 3.106 6.421 -1.382 30.925 2 HH_DG2DT3:DA7DC8_II H 2 ? I 8 ? H 3 ? I 7 ? 1 C DT 3 1_555 D DA 7 1_555 C DA 4 1_555 D DT 6 1_555 0.708 -0.264 3.403 -0.787 13.021 38.304 -1.890 -1.117 3.139 19.178 1.159 40.385 3 HH_DT3DA4:DT6DA7_II H 3 ? I 7 ? H 4 ? I 6 ? 1 C DA 4 1_555 D DT 6 1_555 C UPS 5 1_555 D DC 5 1_555 -1.292 -1.104 3.275 0.801 7.145 27.156 -3.881 2.844 2.858 14.889 -1.669 28.074 4 HH_DA4UPS5:DC5DT6_II H 4 ? I 6 ? H 5 ? I 5 ? 1 C UPS 5 1_555 D DC 5 1_555 C DT 6 1_555 D DA 4 1_555 1.218 -0.463 3.464 0.412 1.712 30.806 -1.223 -2.204 3.450 3.220 -0.775 30.855 5 HH_UPS5DT6:DA4DC5_II H 5 ? I 5 ? H 6 ? I 4 ? 1 C DT 6 1_555 D DA 4 1_555 C DA 7 1_555 D DT 3 1_555 0.294 -0.618 3.475 3.178 11.422 34.197 -2.673 -0.007 3.129 18.740 -5.213 36.136 6 HH_DT6DA7:DT3DA4_II H 6 ? I 4 ? H 7 ? I 3 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'PHOSPHATE ION' PO4 5 'MAGNESIUM ION' MG 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3FZI _pdbx_initial_refinement_model.details 'PDB ENTRY 3FZI' #