HEADER TRANSFERASE 05-FEB-09 3G5R TITLE CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS TRMFO IN COMPLEX WITH TITLE 2 TETRAHYDROFOLATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: METHYLENETETRAHYDROFOLATE--TRNA-(URACIL-5-)- COMPND 3 METHYLTRANSFERASE TRMFO; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: TRMFO, FOLATE-DEPENDENT TRNA (URACIL-5-)-METHYLTRANSFERASE, COMPND 6 FOLATE-DEPENDENT TRNA(M-5-U54)-METHYLTRANSFERASE; COMPND 7 EC: 2.1.1.74; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 300852; SOURCE 4 STRAIN: HB8; SOURCE 5 GENE: TRMFO, TTHA1442; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-11 KEYWDS TRNA METHYLTRANSFERASE FAD FOLATE, FAD, FLAVOPROTEIN, KEYWDS 2 METHYLTRANSFERASE, TRANSFERASE, TRNA PROCESSING EXPDTA X-RAY DIFFRACTION AUTHOR H.NISHIMASU,R.ISHITANI,H.HORI,O.NUREKI REVDAT 4 01-NOV-23 3G5R 1 REMARK LINK REVDAT 3 24-AUG-11 3G5R 1 HET HETATM HETNAM VERSN REVDAT 2 26-MAY-09 3G5R 1 JRNL REVDAT 1 19-MAY-09 3G5R 0 JRNL AUTH H.NISHIMASU,R.ISHITANI,K.YAMASHITA,C.IWASHITA,A.HIRATA, JRNL AUTH 2 H.HORI,O.NUREKI JRNL TITL ATOMIC STRUCTURE OF A FOLATE/FAD-DEPENDENT TRNA T54 JRNL TITL 2 METHYLTRANSFERASE JRNL REF PROC.NATL.ACAD.SCI.USA V. 106 8180 2009 JRNL REFN ISSN 0027-8424 JRNL PMID 19416846 JRNL DOI 10.1073/PNAS.0901330106 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.84 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.480 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 60710 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 3075 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.8503 - 4.4777 0.97 2648 139 0.1816 0.1839 REMARK 3 2 4.4777 - 3.5551 0.99 2687 127 0.1438 0.1604 REMARK 3 3 3.5551 - 3.1060 1.00 2688 133 0.1596 0.1475 REMARK 3 4 3.1060 - 2.8221 1.00 2711 136 0.1674 0.1926 REMARK 3 5 2.8221 - 2.6199 0.99 2664 138 0.1714 0.2051 REMARK 3 6 2.6199 - 2.4655 0.99 2648 138 0.1626 0.2110 REMARK 3 7 2.4655 - 2.3421 0.99 2628 159 0.1576 0.1688 REMARK 3 8 2.3421 - 2.2401 0.99 2636 158 0.1536 0.1956 REMARK 3 9 2.2401 - 2.1539 0.99 2662 157 0.1488 0.1743 REMARK 3 10 2.1539 - 2.0796 0.99 2672 144 0.1502 0.1631 REMARK 3 11 2.0796 - 2.0146 0.99 2628 153 0.1474 0.1753 REMARK 3 12 2.0146 - 1.9570 0.99 2676 109 0.1584 0.1840 REMARK 3 13 1.9570 - 1.9055 0.98 2665 118 0.1645 0.2087 REMARK 3 14 1.9055 - 1.8590 0.98 2571 163 0.1677 0.2008 REMARK 3 15 1.8590 - 1.8167 0.98 2597 134 0.1724 0.2065 REMARK 3 16 1.8167 - 1.7781 0.97 2628 145 0.1699 0.2096 REMARK 3 17 1.7781 - 1.7425 0.97 2562 140 0.1777 0.2015 REMARK 3 18 1.7425 - 1.7096 0.97 2601 138 0.1881 0.2147 REMARK 3 19 1.7096 - 1.6791 0.96 2559 150 0.1997 0.2209 REMARK 3 20 1.6791 - 1.6506 0.96 2567 134 0.2094 0.2269 REMARK 3 21 1.6506 - 1.6240 0.95 2545 128 0.2248 0.2453 REMARK 3 22 1.6240 - 1.5990 0.89 2392 134 0.2308 0.2240 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.39 REMARK 3 B_SOL : 62.51 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.970 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.68 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.05600 REMARK 3 B22 (A**2) : -2.85500 REMARK 3 B33 (A**2) : 3.91200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.06600 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3415 REMARK 3 ANGLE : 0.943 4628 REMARK 3 CHIRALITY : 0.063 495 REMARK 3 PLANARITY : 0.004 599 REMARK 3 DIHEDRAL : 15.839 1272 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3G5R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-FEB-09. REMARK 100 THE DEPOSITION ID IS D_1000051457. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-NOV-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60724 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 35.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3G5S REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 8000, 0.2M CALCIUM ACETATE, REMARK 280 0.1M MES-NAOH (PH 6.5), 0.3MM TETRAHYDROFOLIC ACID, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 48.51150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 207 REMARK 465 ARG A 208 REMARK 465 HIS A 209 REMARK 465 THR A 210 REMARK 465 PRO A 211 REMARK 465 HIS A 212 REMARK 465 ASP A 213 REMARK 465 TRP A 214 REMARK 465 GLU A 215 REMARK 465 LYS A 216 REMARK 465 LEU A 217 REMARK 465 GLU A 218 REMARK 465 PHE A 219 REMARK 465 PHE A 220 REMARK 465 GLU A 221 REMARK 465 ALA A 222 REMARK 465 ARG A 437 REMARK 465 PRO A 438 REMARK 465 GLU A 439 REMARK 465 ALA A 440 REMARK 465 ALA A 441 REMARK 465 LEU A 442 REMARK 465 VAL A 443 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 51 -115.07 -137.97 REMARK 500 ALA A 132 52.73 -144.15 REMARK 500 ASN A 310 100.94 -166.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 THG A 445 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 446 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 84 O REMARK 620 2 HOH A 512 O 86.3 REMARK 620 3 HOH A 556 O 70.1 152.2 REMARK 620 4 HOH A 739 O 158.1 74.2 131.2 REMARK 620 5 HOH A 740 O 128.8 141.0 58.8 72.9 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 444 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE THG A 445 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 446 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 447 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 448 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 449 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 450 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 451 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 452 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3G5Q RELATED DB: PDB REMARK 900 THE SAME PROTEIN AT 2.1 A RESOLUTION REMARK 900 RELATED ID: 3G5S RELATED DB: PDB REMARK 900 THE SAME PROTEIN AT 1.05 A RESOLUTION DBREF 3G5R A 1 443 UNP Q5SID2 TRMFO_THET8 1 443 SEQRES 1 A 443 MET GLU ARG VAL ASN VAL VAL GLY ALA GLY LEU ALA GLY SEQRES 2 A 443 SER GLU ALA ALA TRP THR LEU LEU ARG LEU GLY VAL PRO SEQRES 3 A 443 VAL ARG LEU PHE GLU MET ARG PRO LYS ARG MET THR PRO SEQRES 4 A 443 ALA HIS GLY THR ASP ARG PHE ALA GLU ILE VAL CYS SER SEQRES 5 A 443 ASN SER LEU GLY GLY GLU GLY GLU THR ASN ALA LYS GLY SEQRES 6 A 443 LEU LEU GLN ALA GLU MET ARG ARG ALA GLY SER LEU VAL SEQRES 7 A 443 MET GLU ALA ALA ASP LEU ALA ARG VAL PRO ALA GLY GLY SEQRES 8 A 443 ALA LEU ALA VAL ASP ARG GLU GLU PHE SER GLY TYR ILE SEQRES 9 A 443 THR GLU ARG LEU THR GLY HIS PRO LEU LEU GLU VAL VAL SEQRES 10 A 443 ARG GLU GLU VAL ARG GLU ILE PRO PRO GLY ILE THR VAL SEQRES 11 A 443 LEU ALA THR GLY PRO LEU THR SER GLU ALA LEU ALA GLU SEQRES 12 A 443 ALA LEU LYS ARG ARG PHE GLY ASP HIS PHE LEU ALA TYR SEQRES 13 A 443 TYR ASP ALA ALA SER PRO ILE VAL LEU TYR GLU SER ILE SEQRES 14 A 443 ASP LEU THR LYS CYS PHE ARG ALA GLY ARG TYR GLY GLN SEQRES 15 A 443 SER ALA ASP TYR LEU ASN CYS PRO MET THR GLU GLU GLU SEQRES 16 A 443 TYR ARG ARG PHE HIS GLN ALA LEU LEU GLU ALA GLN ARG SEQRES 17 A 443 HIS THR PRO HIS ASP TRP GLU LYS LEU GLU PHE PHE GLU SEQRES 18 A 443 ALA CYS VAL PRO VAL GLU GLU LEU ALA ARG ARG GLY TYR SEQRES 19 A 443 GLN THR LEU LEU PHE GLY PRO MET LYS PRO VAL GLY LEU SEQRES 20 A 443 VAL ASP PRO ARG THR GLY LYS GLU PRO PHE ALA VAL VAL SEQRES 21 A 443 GLN LEU ARG GLN GLU ASP LYS ALA GLY ARG MET TRP SER SEQRES 22 A 443 LEU VAL GLY PHE GLN THR GLY LEU LYS TRP PRO GLU GLN SEQRES 23 A 443 LYS ARG LEU ILE GLN MET ILE PRO GLY LEU GLU ASN ALA SEQRES 24 A 443 GLU ILE VAL ARG TYR GLY VAL MET HIS ARG ASN THR TYR SEQRES 25 A 443 LEU ASN ALA PRO ARG LEU LEU GLY GLU THR LEU GLU PHE SEQRES 26 A 443 ARG GLU ALA GLU GLY LEU TYR ALA ALA GLY VAL LEU ALA SEQRES 27 A 443 GLY VAL GLU GLY TYR LEU GLU SER ALA ALA THR GLY PHE SEQRES 28 A 443 LEU ALA GLY LEU ASN ALA ALA ARG LYS ALA LEU GLY LEU SEQRES 29 A 443 PRO PRO VAL ALA PRO PRO GLU GLU SER MET LEU GLY GLY SEQRES 30 A 443 LEU VAL ARG TYR LEU ALA THR ALA ASN PRO GLU GLY PHE SEQRES 31 A 443 GLN PRO MET TYR ALA ASN TRP GLY LEU VAL PRO PRO VAL SEQRES 32 A 443 GLU GLY ARG MET GLY LYS LYS GLU LYS ARG GLN ALA MET SEQRES 33 A 443 TYR ARG ARG GLY LEU GLU ALA PHE SER ALA TRP LEU SER SEQRES 34 A 443 GLY LEU ASN PRO PRO LEU PRO ARG PRO GLU ALA ALA LEU SEQRES 35 A 443 VAL HET FAD A 444 53 HET THG A 445 12 HET CA A 446 1 HET EDO A 447 4 HET EDO A 448 4 HET EDO A 449 4 HET EDO A 450 4 HET EDO A 451 4 HET EDO A 452 4 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM THG (6S)-5,6,7,8-TETRAHYDROFOLATE HETNAM CA CALCIUM ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 THG C19 H23 N7 O6 FORMUL 4 CA CA 2+ FORMUL 5 EDO 6(C2 H6 O2) FORMUL 11 HOH *378(H2 O) HELIX 1 1 GLY A 10 LEU A 23 1 14 HELIX 2 2 ASN A 62 ALA A 74 1 13 HELIX 3 3 SER A 76 ALA A 85 1 10 HELIX 4 4 ASP A 96 GLY A 110 1 15 HELIX 5 5 SER A 138 GLY A 150 1 13 HELIX 6 6 GLU A 167 ILE A 169 5 3 HELIX 7 7 ASP A 170 CYS A 174 5 5 HELIX 8 8 THR A 192 ALA A 206 1 15 HELIX 9 9 PRO A 225 GLY A 233 1 9 HELIX 10 10 GLN A 235 GLY A 240 1 6 HELIX 11 11 LYS A 282 GLN A 291 1 10 HELIX 12 12 ASN A 314 LEU A 319 1 6 HELIX 13 13 GLY A 335 GLY A 339 5 5 HELIX 14 14 GLY A 342 GLY A 363 1 22 HELIX 15 15 SER A 373 ALA A 385 1 13 HELIX 16 16 ASN A 396 VAL A 400 5 5 HELIX 17 17 GLY A 408 LEU A 431 1 24 SHEET 1 A 5 LEU A 114 VAL A 117 0 SHEET 2 A 5 VAL A 27 PHE A 30 1 N LEU A 29 O VAL A 117 SHEET 3 A 5 VAL A 4 VAL A 7 1 N VAL A 6 O PHE A 30 SHEET 4 A 5 THR A 129 LEU A 131 1 O VAL A 130 N VAL A 7 SHEET 5 A 5 LEU A 331 ALA A 333 1 O TYR A 332 N LEU A 131 SHEET 1 B 3 SER A 54 GLY A 57 0 SHEET 2 B 3 ALA A 92 VAL A 95 -1 O LEU A 93 N LEU A 55 SHEET 3 B 3 ARG A 86 VAL A 87 -1 N VAL A 87 O ALA A 94 SHEET 1 C 2 LEU A 154 ALA A 160 0 SHEET 2 C 2 VAL A 306 LEU A 313 -1 O TYR A 312 N ALA A 155 SHEET 1 D 6 PHE A 175 ARG A 176 0 SHEET 2 D 6 LEU A 187 MET A 191 -1 O ASN A 188 N PHE A 175 SHEET 3 D 6 ALA A 258 GLN A 264 -1 O ALA A 258 N MET A 191 SHEET 4 D 6 MET A 271 LEU A 274 -1 O SER A 273 N ARG A 263 SHEET 5 D 6 ILE A 163 LEU A 165 -1 N VAL A 164 O TRP A 272 SHEET 6 D 6 ILE A 301 ARG A 303 -1 O ARG A 303 N ILE A 163 LINK O LEU A 84 CA CA A 446 1555 1555 2.46 LINK CA CA A 446 O HOH A 512 1555 1555 2.67 LINK CA CA A 446 O HOH A 556 1555 1555 2.87 LINK CA CA A 446 O HOH A 739 1555 1555 2.65 LINK CA CA A 446 O HOH A 740 1555 1555 2.83 CISPEP 1 ARG A 33 PRO A 34 0 4.27 CISPEP 2 ASN A 432 PRO A 433 0 4.72 SITE 1 AC1 32 GLY A 8 GLY A 10 LEU A 11 ALA A 12 SITE 2 AC1 32 GLU A 31 MET A 32 ARG A 33 HIS A 41 SITE 3 AC1 32 CYS A 51 SER A 52 GLU A 119 GLU A 120 SITE 4 AC1 32 VAL A 121 ALA A 132 THR A 133 GLY A 134 SITE 5 AC1 32 PRO A 135 SER A 138 GLY A 335 VAL A 336 SITE 6 AC1 32 GLY A 342 TYR A 343 SER A 346 THG A 445 SITE 7 AC1 32 HOH A 453 HOH A 460 HOH A 461 HOH A 466 SITE 8 AC1 32 HOH A 476 HOH A 480 HOH A 522 HOH A 557 SITE 1 AC2 8 PRO A 135 HIS A 308 ARG A 309 ASN A 310 SITE 2 AC2 8 FAD A 444 HOH A 612 HOH A 812 HOH A 813 SITE 1 AC3 5 LEU A 84 HOH A 512 HOH A 556 HOH A 739 SITE 2 AC3 5 HOH A 740 SITE 1 AC4 6 HIS A 152 PHE A 153 ASN A 314 PHE A 390 SITE 2 AC4 6 HOH A 567 HOH A 679 SITE 1 AC5 7 ILE A 301 VAL A 302 TYR A 304 TYR A 394 SITE 2 AC5 7 ASN A 396 HOH A 507 HOH A 620 SITE 1 AC6 5 LYS A 360 GLY A 363 PRO A 365 HOH A 539 SITE 2 AC6 5 HOH A 677 SITE 1 AC7 3 PHE A 325 ARG A 326 GLU A 329 SITE 1 AC8 4 LYS A 35 MET A 37 PHE A 175 ARG A 176 SITE 1 AC9 5 GLU A 265 THR A 384 ALA A 385 ASN A 386 SITE 2 AC9 5 HOH A 810 CRYST1 46.809 97.023 53.794 90.00 101.29 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021363 0.000000 0.004265 0.00000 SCALE2 0.000000 0.010307 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018956 0.00000