HEADER TRANSFERASE 05-FEB-09 3G5S TITLE CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS TRMFO IN COMPLEX WITH TITLE 2 GLUTATHIONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: METHYLENETETRAHYDROFOLATE--TRNA-(URACIL-5-)- COMPND 3 METHYLTRANSFERASE TRMFO; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: TRMFO, FOLATE-DEPENDENT TRNA (URACIL-5-)-METHYLTRANSFERASE, COMPND 6 FOLATE-DEPENDENT TRNA(M-5-U54)-METHYLTRANSFERASE; COMPND 7 EC: 2.1.1.74; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 300852; SOURCE 4 STRAIN: HB8; SOURCE 5 GENE: TRMFO, TTHA1442; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-11 KEYWDS TRNA METHYLTRANSFERASE FAD FOLATE, FAD, FLAVOPROTEIN, KEYWDS 2 METHYLTRANSFERASE, TRANSFERASE, TRNA PROCESSING EXPDTA X-RAY DIFFRACTION AUTHOR H.NISHIMASU,R.ISHITANI,H.HORI,O.NUREKI REVDAT 4 26-MAR-25 3G5S 1 REMARK LINK REVDAT 3 14-DEC-11 3G5S 1 HETATM HETNAM VERSN REVDAT 2 26-MAY-09 3G5S 1 JRNL REVDAT 1 19-MAY-09 3G5S 0 JRNL AUTH H.NISHIMASU,R.ISHITANI,K.YAMASHITA,C.IWASHITA,A.HIRATA, JRNL AUTH 2 H.HORI,O.NUREKI JRNL TITL ATOMIC STRUCTURE OF A FOLATE/FAD-DEPENDENT TRNA T54 JRNL TITL 2 METHYLTRANSFERASE JRNL REF PROC.NATL.ACAD.SCI.USA V. 106 8180 2009 JRNL REFN ISSN 0027-8424 JRNL PMID 19416846 JRNL DOI 10.1073/PNAS.0901330106 REMARK 2 REMARK 2 RESOLUTION. 1.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.8 REMARK 3 NUMBER OF REFLECTIONS : 209897 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.162 REMARK 3 FREE R VALUE : 0.178 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 19458 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.8495 - 3.2620 1.00 13316 688 0.1713 0.1962 REMARK 3 2 3.2620 - 2.5892 1.00 13313 715 0.1831 0.1872 REMARK 3 3 2.5892 - 2.2620 1.00 13244 714 0.1726 0.1859 REMARK 3 4 2.2620 - 2.0552 1.00 13295 769 0.1608 0.1774 REMARK 3 5 2.0552 - 1.9079 0.99 13209 689 0.1514 0.1779 REMARK 3 6 1.9079 - 1.7954 0.98 13168 622 0.1489 0.1623 REMARK 3 7 1.7954 - 1.7055 0.98 13175 620 0.1379 0.1576 REMARK 3 8 1.7055 - 1.6312 0.98 12980 752 0.1305 0.1502 REMARK 3 9 1.6312 - 1.5684 0.98 13008 700 0.1229 0.1462 REMARK 3 10 1.5684 - 1.5143 0.98 13004 640 0.1225 0.1275 REMARK 3 11 1.5143 - 1.4669 0.97 12852 715 0.1214 0.1379 REMARK 3 12 1.4669 - 1.4250 0.97 12882 701 0.1257 0.1325 REMARK 3 13 1.4250 - 1.3875 0.96 12804 682 0.1249 0.1596 REMARK 3 14 1.3875 - 1.3536 0.95 12645 721 0.1312 0.1419 REMARK 3 15 1.3536 - 1.3229 0.95 12603 720 0.1313 0.1491 REMARK 3 16 1.3229 - 1.2947 0.95 12627 637 0.1403 0.1561 REMARK 3 17 1.2947 - 1.2688 0.94 12530 637 0.1447 0.1713 REMARK 3 18 1.2688 - 1.2449 0.94 12502 665 0.1523 0.1787 REMARK 3 19 1.2449 - 1.2226 0.93 12351 694 0.1585 0.1678 REMARK 3 20 1.2226 - 1.2019 0.92 12280 611 0.1653 0.1686 REMARK 3 21 1.2019 - 1.1825 0.91 12173 615 0.1686 0.1894 REMARK 3 22 1.1825 - 1.1643 0.91 12143 663 0.1743 0.1945 REMARK 3 23 1.1643 - 1.1472 0.89 11820 617 0.1820 0.1973 REMARK 3 24 1.1472 - 1.1310 0.88 11804 514 0.1897 0.1988 REMARK 3 25 1.1310 - 1.1157 0.86 11400 618 0.1992 0.2082 REMARK 3 26 1.1157 - 1.1013 0.83 11053 578 0.2054 0.2079 REMARK 3 27 1.1013 - 1.0875 0.79 10465 617 0.2183 0.2221 REMARK 3 28 1.0875 - 1.0744 0.76 10152 541 0.2303 0.2345 REMARK 3 29 1.0744 - 1.0619 0.72 9617 519 0.2429 0.2433 REMARK 3 30 1.0619 - 1.0500 0.65 8553 484 0.2489 0.2489 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 49.85 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.110 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 14.940 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 11.37 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.70500 REMARK 3 B22 (A**2) : -4.35700 REMARK 3 B33 (A**2) : -1.58600 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3515 REMARK 3 ANGLE : 1.179 4774 REMARK 3 CHIRALITY : 0.082 506 REMARK 3 PLANARITY : 0.014 624 REMARK 3 DIHEDRAL : 17.189 1331 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3G5S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 13-FEB-09. REMARK 100 THE DEPOSITION ID IS D_1000051458. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUN-08; 30-MAY-08 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SPRING-8; PHOTON FACTORY REMARK 200 BEAMLINE : BL41XU; AR-NW12A REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.90000; 0.9793 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315; ADSC QUANTUM REMARK 200 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 209948 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.050 REMARK 200 RESOLUTION RANGE LOW (A) : 43.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 13% PEG 3350, 0.1M MAGNESIUM CHLORIDE, REMARK 280 0.05M TRIS-HCL (PH 8.5), 10MM REDUCED-GLUTATHIONE, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.12850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.25050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.11300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.25050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.12850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.11300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 181 REMARK 465 GLN A 182 REMARK 465 SER A 183 REMARK 465 ALA A 184 REMARK 465 ASP A 185 REMARK 465 ASP A 213 REMARK 465 TRP A 214 REMARK 465 GLU A 215 REMARK 465 LYS A 216 REMARK 465 LEU A 217 REMARK 465 GLU A 218 REMARK 465 PHE A 219 REMARK 465 ARG A 437 REMARK 465 PRO A 438 REMARK 465 GLU A 439 REMARK 465 ALA A 440 REMARK 465 ALA A 441 REMARK 465 LEU A 442 REMARK 465 VAL A 443 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 9 48.62 -109.53 REMARK 500 CYS A 51 -121.73 -137.17 REMARK 500 ALA A 89 40.95 -159.69 REMARK 500 ALA A 132 52.73 -145.59 REMARK 500 ALA A 159 59.15 -147.68 REMARK 500 ASN A 310 102.87 -169.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PHE A 220 GLU A 221 -133.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 446 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 391 OE1 REMARK 620 2 GSH A 445 O32 90.1 REMARK 620 3 HOH A 634 O 87.2 86.3 REMARK 620 4 HOH A 635 O 82.9 88.9 169.0 REMARK 620 5 HOH A 636 O 84.9 174.3 96.2 87.7 REMARK 620 6 HOH A 637 O 176.2 91.2 96.4 93.5 93.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 444 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH A 445 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 446 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 447 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 448 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 449 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 450 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 451 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3G5Q RELATED DB: PDB REMARK 900 THE SAME PROTEIN AT 2.1 A RESOLUTION REMARK 900 RELATED ID: 3G5R RELATED DB: PDB REMARK 900 THE SAME PROTEIN AT 1.6 A RESOLUTION DBREF 3G5S A 1 443 UNP Q5SID2 TRMFO_THET8 1 443 SEQRES 1 A 443 MSE GLU ARG VAL ASN VAL VAL GLY ALA GLY LEU ALA GLY SEQRES 2 A 443 SER GLU ALA ALA TRP THR LEU LEU ARG LEU GLY VAL PRO SEQRES 3 A 443 VAL ARG LEU PHE GLU MSE ARG PRO LYS ARG MSE THR PRO SEQRES 4 A 443 ALA HIS GLY THR ASP ARG PHE ALA GLU ILE VAL CYS SER SEQRES 5 A 443 ASN SER LEU GLY GLY GLU GLY GLU THR ASN ALA LYS GLY SEQRES 6 A 443 LEU LEU GLN ALA GLU MSE ARG ARG ALA GLY SER LEU VAL SEQRES 7 A 443 MSE GLU ALA ALA ASP LEU ALA ARG VAL PRO ALA GLY GLY SEQRES 8 A 443 ALA LEU ALA VAL ASP ARG GLU GLU PHE SER GLY TYR ILE SEQRES 9 A 443 THR GLU ARG LEU THR GLY HIS PRO LEU LEU GLU VAL VAL SEQRES 10 A 443 ARG GLU GLU VAL ARG GLU ILE PRO PRO GLY ILE THR VAL SEQRES 11 A 443 LEU ALA THR GLY PRO LEU THR SER GLU ALA LEU ALA GLU SEQRES 12 A 443 ALA LEU LYS ARG ARG PHE GLY ASP HIS PHE LEU ALA TYR SEQRES 13 A 443 TYR ASP ALA ALA SER PRO ILE VAL LEU TYR GLU SER ILE SEQRES 14 A 443 ASP LEU THR LYS CYS PHE ARG ALA GLY ARG TYR GLY GLN SEQRES 15 A 443 SER ALA ASP TYR LEU ASN CYS PRO MSE THR GLU GLU GLU SEQRES 16 A 443 TYR ARG ARG PHE HIS GLN ALA LEU LEU GLU ALA GLN ARG SEQRES 17 A 443 HIS THR PRO HIS ASP TRP GLU LYS LEU GLU PHE PHE GLU SEQRES 18 A 443 ALA CYS VAL PRO VAL GLU GLU LEU ALA ARG ARG GLY TYR SEQRES 19 A 443 GLN THR LEU LEU PHE GLY PRO MSE LYS PRO VAL GLY LEU SEQRES 20 A 443 VAL ASP PRO ARG THR GLY LYS GLU PRO PHE ALA VAL VAL SEQRES 21 A 443 GLN LEU ARG GLN GLU ASP LYS ALA GLY ARG MSE TRP SER SEQRES 22 A 443 LEU VAL GLY PHE GLN THR GLY LEU LYS TRP PRO GLU GLN SEQRES 23 A 443 LYS ARG LEU ILE GLN MSE ILE PRO GLY LEU GLU ASN ALA SEQRES 24 A 443 GLU ILE VAL ARG TYR GLY VAL MSE HIS ARG ASN THR TYR SEQRES 25 A 443 LEU ASN ALA PRO ARG LEU LEU GLY GLU THR LEU GLU PHE SEQRES 26 A 443 ARG GLU ALA GLU GLY LEU TYR ALA ALA GLY VAL LEU ALA SEQRES 27 A 443 GLY VAL GLU GLY TYR LEU GLU SER ALA ALA THR GLY PHE SEQRES 28 A 443 LEU ALA GLY LEU ASN ALA ALA ARG LYS ALA LEU GLY LEU SEQRES 29 A 443 PRO PRO VAL ALA PRO PRO GLU GLU SER MSE LEU GLY GLY SEQRES 30 A 443 LEU VAL ARG TYR LEU ALA THR ALA ASN PRO GLU GLY PHE SEQRES 31 A 443 GLN PRO MSE TYR ALA ASN TRP GLY LEU VAL PRO PRO VAL SEQRES 32 A 443 GLU GLY ARG MSE GLY LYS LYS GLU LYS ARG GLN ALA MSE SEQRES 33 A 443 TYR ARG ARG GLY LEU GLU ALA PHE SER ALA TRP LEU SER SEQRES 34 A 443 GLY LEU ASN PRO PRO LEU PRO ARG PRO GLU ALA ALA LEU SEQRES 35 A 443 VAL MODRES 3G5S MSE A 1 MET SELENOMETHIONINE MODRES 3G5S MSE A 32 MET SELENOMETHIONINE MODRES 3G5S MSE A 37 MET SELENOMETHIONINE MODRES 3G5S MSE A 71 MET SELENOMETHIONINE MODRES 3G5S MSE A 79 MET SELENOMETHIONINE MODRES 3G5S MSE A 191 MET SELENOMETHIONINE MODRES 3G5S MSE A 242 MET SELENOMETHIONINE MODRES 3G5S MSE A 271 MET SELENOMETHIONINE MODRES 3G5S MSE A 292 MET SELENOMETHIONINE MODRES 3G5S MSE A 307 MET SELENOMETHIONINE MODRES 3G5S MSE A 374 MET SELENOMETHIONINE MODRES 3G5S MSE A 393 MET SELENOMETHIONINE MODRES 3G5S MSE A 407 MET SELENOMETHIONINE MODRES 3G5S MSE A 416 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 32 8 HET MSE A 37 8 HET MSE A 71 8 HET MSE A 79 8 HET MSE A 191 16 HET MSE A 242 8 HET MSE A 271 8 HET MSE A 292 8 HET MSE A 307 8 HET MSE A 374 8 HET MSE A 393 8 HET MSE A 407 8 HET MSE A 416 8 HET FAD A 444 53 HET GSH A 445 20 HET MG A 446 1 HET EDO A 447 4 HET EDO A 448 4 HET EDO A 449 4 HET EDO A 450 4 HET EDO A 451 4 HETNAM MSE SELENOMETHIONINE HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM GSH GLUTATHIONE HETNAM MG MAGNESIUM ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 14(C5 H11 N O2 SE) FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 GSH C10 H17 N3 O6 S FORMUL 4 MG MG 2+ FORMUL 5 EDO 5(C2 H6 O2) FORMUL 10 HOH *641(H2 O) HELIX 1 1 GLY A 10 LEU A 23 1 14 HELIX 2 2 ASN A 62 GLY A 75 1 14 HELIX 3 3 SER A 76 ALA A 85 1 10 HELIX 4 4 ASP A 96 GLY A 110 1 15 HELIX 5 5 SER A 138 GLY A 150 1 13 HELIX 6 6 GLU A 167 ILE A 169 5 3 HELIX 7 7 ASP A 170 CYS A 174 5 5 HELIX 8 8 THR A 192 ALA A 206 1 15 HELIX 9 9 PRO A 225 ARG A 232 1 8 HELIX 10 10 GLN A 235 GLY A 240 1 6 HELIX 11 11 LYS A 282 GLN A 291 1 10 HELIX 12 12 ASN A 314 LEU A 319 1 6 HELIX 13 13 GLY A 335 GLY A 339 5 5 HELIX 14 14 GLY A 342 LEU A 362 1 21 HELIX 15 15 SER A 373 ALA A 385 1 13 HELIX 16 16 ASN A 396 VAL A 400 5 5 HELIX 17 17 GLY A 408 GLY A 430 1 23 SHEET 1 A 6 LEU A 114 VAL A 117 0 SHEET 2 A 6 VAL A 27 PHE A 30 1 N LEU A 29 O GLU A 115 SHEET 3 A 6 VAL A 4 VAL A 7 1 N VAL A 6 O PHE A 30 SHEET 4 A 6 THR A 129 LEU A 131 1 O VAL A 130 N VAL A 7 SHEET 5 A 6 ALA A 328 ALA A 333 1 O TYR A 332 N LEU A 131 SHEET 6 A 6 GLU A 324 PHE A 325 -1 N PHE A 325 O LEU A 331 SHEET 1 B 3 SER A 54 GLY A 57 0 SHEET 2 B 3 ALA A 92 VAL A 95 -1 O LEU A 93 N LEU A 55 SHEET 3 B 3 ARG A 86 VAL A 87 -1 N VAL A 87 O ALA A 94 SHEET 1 C 2 LEU A 154 ALA A 160 0 SHEET 2 C 2 VAL A 306 LEU A 313 -1 O TYR A 312 N ALA A 155 SHEET 1 D 6 PHE A 175 ARG A 176 0 SHEET 2 D 6 LEU A 187 MSE A 191 -1 O ASN A 188 N PHE A 175 SHEET 3 D 6 ALA A 258 GLN A 264 -1 O VAL A 260 N CYS A 189 SHEET 4 D 6 MSE A 271 LEU A 274 -1 O SER A 273 N ARG A 263 SHEET 5 D 6 ILE A 163 LEU A 165 -1 N VAL A 164 O TRP A 272 SHEET 6 D 6 ILE A 301 ARG A 303 -1 O ARG A 303 N ILE A 163 LINK C MSE A 1 N GLU A 2 1555 1555 1.33 LINK C GLU A 31 N MSE A 32 1555 1555 1.33 LINK C MSE A 32 N ARG A 33 1555 1555 1.33 LINK C ARG A 36 N MSE A 37 1555 1555 1.33 LINK C MSE A 37 N THR A 38 1555 1555 1.33 LINK C GLU A 70 N MSE A 71 1555 1555 1.33 LINK C MSE A 71 N ARG A 72 1555 1555 1.34 LINK C VAL A 78 N MSE A 79 1555 1555 1.33 LINK C MSE A 79 N GLU A 80 1555 1555 1.33 LINK C PRO A 190 N AMSE A 191 1555 1555 1.33 LINK C PRO A 190 N BMSE A 191 1555 1555 1.33 LINK C AMSE A 191 N THR A 192 1555 1555 1.33 LINK C BMSE A 191 N THR A 192 1555 1555 1.33 LINK C PRO A 241 N MSE A 242 1555 1555 1.33 LINK C MSE A 242 N LYS A 243 1555 1555 1.33 LINK C ARG A 270 N MSE A 271 1555 1555 1.33 LINK C MSE A 271 N TRP A 272 1555 1555 1.33 LINK C GLN A 291 N MSE A 292 1555 1555 1.33 LINK C MSE A 292 N ILE A 293 1555 1555 1.33 LINK C VAL A 306 N MSE A 307 1555 1555 1.33 LINK C MSE A 307 N HIS A 308 1555 1555 1.32 LINK C SER A 373 N MSE A 374 1555 1555 1.32 LINK C MSE A 374 N LEU A 375 1555 1555 1.33 LINK C PRO A 392 N MSE A 393 1555 1555 1.33 LINK C MSE A 393 N TYR A 394 1555 1555 1.33 LINK C ARG A 406 N MSE A 407 1555 1555 1.33 LINK C MSE A 407 N GLY A 408 1555 1555 1.33 LINK C ALA A 415 N MSE A 416 1555 1555 1.33 LINK C MSE A 416 N TYR A 417 1555 1555 1.32 LINK OE1BGLN A 391 MG MG A 446 1555 1555 2.18 LINK O32 GSH A 445 MG MG A 446 1555 1555 2.12 LINK MG MG A 446 O HOH A 634 1555 1555 2.27 LINK MG MG A 446 O HOH A 635 1555 1555 2.33 LINK MG MG A 446 O HOH A 636 1555 1555 2.27 LINK MG MG A 446 O HOH A 637 1555 1555 2.42 CISPEP 1 ARG A 33 PRO A 34 0 4.15 CISPEP 2 ASN A 432 PRO A 433 0 4.45 SITE 1 AC1 34 GLY A 8 GLY A 10 LEU A 11 ALA A 12 SITE 2 AC1 34 GLU A 31 MSE A 32 ARG A 33 THR A 38 SITE 3 AC1 34 HIS A 41 CYS A 51 SER A 52 GLU A 119 SITE 4 AC1 34 GLU A 120 VAL A 121 ALA A 132 THR A 133 SITE 5 AC1 34 GLY A 134 PRO A 135 SER A 138 HIS A 212 SITE 6 AC1 34 GLY A 335 VAL A 336 GLU A 341 GLY A 342 SITE 7 AC1 34 TYR A 343 SER A 346 HOH A 642 HOH A 644 SITE 8 AC1 34 HOH A 658 HOH A 659 HOH A 665 HOH A 682 SITE 9 AC1 34 HOH A 696 HOH A 752 SITE 1 AC2 17 TYR A 157 ASP A 158 ALA A 159 SER A 161 SITE 2 AC2 17 CYS A 223 LEU A 274 GLY A 276 GLN A 278 SITE 3 AC2 17 TYR A 312 GLN A 391 MG A 446 EDO A 448 SITE 4 AC2 17 HOH A 484 HOH A 487 HOH A 489 HOH A 634 SITE 5 AC2 17 HOH A 637 SITE 1 AC3 6 GLN A 391 GSH A 445 HOH A 634 HOH A 635 SITE 2 AC3 6 HOH A 636 HOH A 637 SITE 1 AC4 5 GLU A 324 PHE A 325 ARG A 326 GLU A 329 SITE 2 AC4 5 HOH A 809 SITE 1 AC5 6 HIS A 152 PHE A 153 ASN A 314 PHE A 390 SITE 2 AC5 6 GSH A 445 HOH A1087 SITE 1 AC6 6 GLU A 265 ASP A 266 LYS A 267 THR A 384 SITE 2 AC6 6 ALA A 385 ASN A 386 SITE 1 AC7 4 LEU A 165 GLU A 300 TRP A 397 ARG A 413 SITE 1 AC8 7 LEU A 23 GLY A 24 PHE A 239 LYS A 243 SITE 2 AC8 7 LEU A 362 HOH A 578 HOH A 938 CRYST1 48.257 92.226 104.501 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020722 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010843 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009569 0.00000 CONECT 1 2 CONECT 2 1 3 5 CONECT 3 2 4 9 CONECT 4 3 CONECT 5 2 6 CONECT 6 5 7 CONECT 7 6 8 CONECT 8 7 CONECT 9 3 CONECT 226 233 CONECT 233 226 234 CONECT 234 233 235 237 CONECT 235 234 236 241 CONECT 236 235 CONECT 237 234 238 CONECT 238 237 239 CONECT 239 238 240 CONECT 240 239 CONECT 241 235 CONECT 270 279 CONECT 279 270 280 CONECT 280 279 281 283 CONECT 281 280 282 287 CONECT 282 281 CONECT 283 280 284 CONECT 284 283 285 CONECT 285 284 286 CONECT 286 285 CONECT 287 281 CONECT 520 527 CONECT 527 520 528 CONECT 528 527 529 531 CONECT 529 528 530 535 CONECT 530 529 CONECT 531 528 532 CONECT 532 531 533 CONECT 533 532 534 CONECT 534 533 CONECT 535 529 CONECT 582 587 CONECT 587 582 588 CONECT 588 587 589 591 CONECT 589 588 590 595 CONECT 590 589 CONECT 591 588 592 CONECT 592 591 593 CONECT 593 592 594 CONECT 594 593 CONECT 595 589 CONECT 1435 1440 1441 CONECT 1440 1435 1442 CONECT 1441 1435 1443 CONECT 1442 1440 1444 1448 CONECT 1443 1441 1445 1449 CONECT 1444 1442 1446 1456 CONECT 1445 1443 1447 1456 CONECT 1446 1444 CONECT 1447 1445 CONECT 1448 1442 1450 CONECT 1449 1443 1451 CONECT 1450 1448 1452 CONECT 1451 1449 1453 CONECT 1452 1450 1454 CONECT 1453 1451 1455 CONECT 1454 1452 CONECT 1455 1453 CONECT 1456 1444 1445 CONECT 1813 1818 CONECT 1818 1813 1819 CONECT 1819 1818 1820 1822 CONECT 1820 1819 1821 1826 CONECT 1821 1820 CONECT 1822 1819 1823 CONECT 1823 1822 1824 CONECT 1824 1823 1825 CONECT 1825 1824 CONECT 1826 1820 CONECT 2038 2047 CONECT 2047 2038 2048 CONECT 2048 2047 2049 2051 CONECT 2049 2048 2050 2055 CONECT 2050 2049 CONECT 2051 2048 2052 CONECT 2052 2051 2053 CONECT 2053 2052 2054 CONECT 2054 2053 CONECT 2055 2049 CONECT 2219 2226 CONECT 2226 2219 2227 CONECT 2227 2226 2228 2230 CONECT 2228 2227 2229 2234 CONECT 2229 2228 CONECT 2230 2227 2231 CONECT 2231 2230 2232 CONECT 2232 2231 2233 CONECT 2233 2232 CONECT 2234 2228 CONECT 2336 2341 CONECT 2341 2336 2342 CONECT 2342 2341 2343 2345 CONECT 2343 2342 2344 2349 CONECT 2344 2343 CONECT 2345 2342 2346 CONECT 2346 2345 2347 CONECT 2347 2346 2348 CONECT 2348 2347 CONECT 2349 2343 CONECT 2831 2835 CONECT 2835 2831 2836 CONECT 2836 2835 2837 2839 CONECT 2837 2836 2838 2843 CONECT 2838 2837 CONECT 2839 2836 2840 CONECT 2840 2839 2841 CONECT 2841 2840 2842 CONECT 2842 2841 CONECT 2843 2837 CONECT 2976 3414 CONECT 2981 2986 CONECT 2986 2981 2987 CONECT 2987 2986 2988 2990 CONECT 2988 2987 2989 2994 CONECT 2989 2988 CONECT 2990 2987 2991 CONECT 2991 2990 2992 CONECT 2992 2991 2993 CONECT 2993 2992 CONECT 2994 2988 CONECT 3088 3097 CONECT 3097 3088 3098 CONECT 3098 3097 3099 3101 CONECT 3099 3098 3100 3105 CONECT 3100 3099 CONECT 3101 3098 3102 CONECT 3102 3101 3103 CONECT 3103 3102 3104 CONECT 3104 3103 CONECT 3105 3099 CONECT 3167 3170 CONECT 3170 3167 3171 CONECT 3171 3170 3172 3174 CONECT 3172 3171 3173 3178 CONECT 3173 3172 CONECT 3174 3171 3175 CONECT 3175 3174 3176 CONECT 3176 3175 3177 CONECT 3177 3176 CONECT 3178 3172 CONECT 3341 3342 3343 3344 3393 CONECT 3342 3341 CONECT 3343 3341 CONECT 3344 3341 3345 CONECT 3345 3344 3346 CONECT 3346 3345 3347 3348 CONECT 3347 3346 3352 CONECT 3348 3346 3349 3350 CONECT 3349 3348 CONECT 3350 3348 3351 3352 CONECT 3351 3350 CONECT 3352 3347 3350 3353 CONECT 3353 3352 3354 3362 CONECT 3354 3353 3355 CONECT 3355 3354 3356 CONECT 3356 3355 3357 3362 CONECT 3357 3356 3358 3359 CONECT 3358 3357 CONECT 3359 3357 3360 CONECT 3360 3359 3361 CONECT 3361 3360 3362 CONECT 3362 3353 3356 3361 CONECT 3363 3364 3380 CONECT 3364 3363 3365 3366 CONECT 3365 3364 CONECT 3366 3364 3367 CONECT 3367 3366 3368 3369 CONECT 3368 3367 CONECT 3369 3367 3370 3380 CONECT 3370 3369 3371 CONECT 3371 3370 3372 3378 CONECT 3372 3371 3373 CONECT 3373 3372 3374 3375 CONECT 3374 3373 CONECT 3375 3373 3376 3377 CONECT 3376 3375 CONECT 3377 3375 3378 CONECT 3378 3371 3377 3379 CONECT 3379 3378 3380 3381 CONECT 3380 3363 3369 3379 CONECT 3381 3379 3382 CONECT 3382 3381 3383 3384 CONECT 3383 3382 CONECT 3384 3382 3385 3386 CONECT 3385 3384 CONECT 3386 3384 3387 3388 CONECT 3387 3386 CONECT 3388 3386 3389 CONECT 3389 3388 3390 CONECT 3390 3389 3391 3392 3393 CONECT 3391 3390 CONECT 3392 3390 CONECT 3393 3341 3390 CONECT 3394 3395 CONECT 3395 3394 3396 3399 CONECT 3396 3395 3397 3398 CONECT 3397 3396 CONECT 3398 3396 CONECT 3399 3395 3400 CONECT 3400 3399 3401 CONECT 3401 3400 3402 3403 CONECT 3402 3401 CONECT 3403 3401 3404 CONECT 3404 3403 3405 3407 CONECT 3405 3404 3406 3409 CONECT 3406 3405 CONECT 3407 3404 3408 CONECT 3408 3407 CONECT 3409 3405 3410 CONECT 3410 3409 3411 CONECT 3411 3410 3412 3413 CONECT 3412 3411 CONECT 3413 3411 3414 CONECT 3414 2976 3413 3617 3618 CONECT 3414 3619 3620 CONECT 3415 3416 3417 CONECT 3416 3415 CONECT 3417 3415 3418 CONECT 3418 3417 CONECT 3419 3420 3421 CONECT 3420 3419 CONECT 3421 3419 3422 CONECT 3422 3421 CONECT 3423 3424 3425 CONECT 3424 3423 CONECT 3425 3423 3426 CONECT 3426 3425 CONECT 3427 3428 3429 CONECT 3428 3427 CONECT 3429 3427 3430 CONECT 3430 3429 CONECT 3431 3432 3433 CONECT 3432 3431 CONECT 3433 3431 3434 CONECT 3434 3433 CONECT 3617 3414 CONECT 3618 3414 CONECT 3619 3414 CONECT 3620 3414 MASTER 335 0 22 17 17 0 25 6 4022 1 247 35 END