HEADER IMMUNE SYSTEM 05-FEB-09 3G5Y TITLE ANTIBODIES SPECIFICALLY TARGETING A LOCALLY MISFOLDED REGION OF TUMOR TITLE 2 ASSOCIATED EGFR COMPND MOL_ID: 1; COMPND 2 MOLECULE: 175 LIGHT CHAIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: 175 HEAVY CHAIN; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: EGFR PEPTIDE; COMPND 11 CHAIN: E; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: MOUSE; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 8 EXPRESSION_SYSTEM_CELL: HYBRIDOMA CELL; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_COMMON: MOUSE; SOURCE 12 ORGANISM_TAXID: 10090; SOURCE 13 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 14 EXPRESSION_SYSTEM_COMMON: MOUSE; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 16 EXPRESSION_SYSTEM_CELL: HYBRIDOMA CELL; SOURCE 17 MOL_ID: 3; SOURCE 18 SYNTHETIC: YES; SOURCE 19 OTHER_DETAILS: PEPTIDE SYNTHESIS KEYWDS ANTIBODY, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR T.P.J.GARRETT,A.W.BURGESS REVDAT 3 12-OCT-11 3G5Y 1 COMPND REVDAT 2 13-JUL-11 3G5Y 1 VERSN REVDAT 1 09-FEB-10 3G5Y 0 JRNL AUTH T.P.J.GARRETT,A.W.BURGESS,H.K.GAN,R.B.LUWOR,G.CARTWRIGHT, JRNL AUTH 2 F.WALKER,S.G.ORCHARD,A.H.A.CLAYTON,E.C.NICE,J.ROTHACKER, JRNL AUTH 3 B.CATIMEL,W.K.CAVENEE,L.J.OLD,E.STOCKERT,G.RITTER,T.E.ADAMS, JRNL AUTH 4 P.A.HOYNE,D.WITTRUP,G.CHAO,J.R.COCHRAN,C.LUO,M.LOU,T.HUYTON, JRNL AUTH 5 Y.XU,W.D.FAIRLIE,S.YAO,A.M.SCOTT,T.G.JOHNS JRNL TITL ANTIBODIES SPECIFICALLY TARGETING A LOCALLY MISFOLDED REGION JRNL TITL 2 OF TUMOR ASSOCIATED EGFR JRNL REF PROC.NATL.ACAD.SCI.USA V. 106 5082 2009 JRNL REFN ISSN 0027-8424 JRNL PMID 19289842 JRNL DOI 10.1073/PNAS.0811559106 REMARK 2 REMARK 2 RESOLUTION. 1.59 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.59 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 14.18 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 78.7 REMARK 3 NUMBER OF REFLECTIONS : 41619 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2222 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.59 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 342 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 8.97 REMARK 3 BIN R VALUE (WORKING SET) : 0.3690 REMARK 3 BIN FREE R VALUE SET COUNT : 21 REMARK 3 BIN FREE R VALUE : 0.4550 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3367 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 247 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.12000 REMARK 3 B22 (A**2) : -0.38000 REMARK 3 B33 (A**2) : -0.74000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.126 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.130 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.087 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.046 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; 0.016 ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; 1.591 ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; 7.062 ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ;35.369 ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ;14.176 ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ;20.179 ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; 0.105 ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; 0.007 ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; 0.192 ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; 0.298 ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; 0.161 ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; 0.190 ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; 0.153 ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; 0.901 ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 106 REMARK 3 ORIGIN FOR THE GROUP (A): -3.7647 17.7298 -7.4805 REMARK 3 T TENSOR REMARK 3 T11: -.0512 T22: .0196 REMARK 3 T33: -.0196 T12: -.0261 REMARK 3 T13: -.0026 T23: .0181 REMARK 3 L TENSOR REMARK 3 L11: 1.0490 L22: .2673 REMARK 3 L33: 1.6250 L12: -.3011 REMARK 3 L13: -.8204 L23: .2478 REMARK 3 S TENSOR REMARK 3 S11: -.0467 S12: .0242 S13: -.0413 REMARK 3 S21: -.0184 S22: -.0121 S23: .0488 REMARK 3 S31: -.0573 S32: .1528 S33: .0588 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 110 A 213 REMARK 3 ORIGIN FOR THE GROUP (A): -20.3824 8.8249 -40.4247 REMARK 3 T TENSOR REMARK 3 T11: .0126 T22: -.0347 REMARK 3 T33: -.0008 T12: .0029 REMARK 3 T13: -.0120 T23: .0044 REMARK 3 L TENSOR REMARK 3 L11: .6332 L22: .1094 REMARK 3 L33: .6200 L12: -.0619 REMARK 3 L13: .2300 L23: .0147 REMARK 3 S TENSOR REMARK 3 S11: -.0035 S12: .0397 S13: -.0042 REMARK 3 S21: .0313 S22: .0160 S23: -.0130 REMARK 3 S31: .0404 S32: .0190 S33: -.0126 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 114 REMARK 3 ORIGIN FOR THE GROUP (A): -24.3371 16.8628 -.8020 REMARK 3 T TENSOR REMARK 3 T11: -.0144 T22: -.0106 REMARK 3 T33: -.0061 T12: .0044 REMARK 3 T13: -.0086 T23: -.0050 REMARK 3 L TENSOR REMARK 3 L11: .3977 L22: .3467 REMARK 3 L33: .8897 L12: .0141 REMARK 3 L13: .1661 L23: -.0793 REMARK 3 S TENSOR REMARK 3 S11: .0005 S12: .0075 S13: -.0150 REMARK 3 S21: -.0147 S22: -.0132 S23: .0118 REMARK 3 S31: -.0297 S32: .0367 S33: .0127 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 120 B 216 REMARK 3 ORIGIN FOR THE GROUP (A): -27.6658 .1487 -28.9301 REMARK 3 T TENSOR REMARK 3 T11: .0326 T22: -.0342 REMARK 3 T33: -.0176 T12: .0123 REMARK 3 T13: .0064 T23: .0037 REMARK 3 L TENSOR REMARK 3 L11: .5127 L22: 1.6106 REMARK 3 L33: .0997 L12: -.5415 REMARK 3 L13: .0119 L23: .1739 REMARK 3 S TENSOR REMARK 3 S11: -.0492 S12: -.0266 S13: -.0175 REMARK 3 S21: .0481 S22: .0275 S23: .0195 REMARK 3 S31: -.0018 S32: -.0247 S33: .0217 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 287 E 302 REMARK 3 ORIGIN FOR THE GROUP (A): -6.0216 22.3630 11.5518 REMARK 3 T TENSOR REMARK 3 T11: -.0180 T22: .0939 REMARK 3 T33: -.0607 T12: -.0607 REMARK 3 T13: -.0505 T23: .0449 REMARK 3 L TENSOR REMARK 3 L11: 11.5672 L22: 3.5068 REMARK 3 L33: .6846 L12: 3.9633 REMARK 3 L13: -1.9592 L23: .1993 REMARK 3 S TENSOR REMARK 3 S11: .1803 S12: -.7409 S13: .2270 REMARK 3 S21: .1071 S22: -.3617 S23: .0397 REMARK 3 S31: -.2328 S32: .2518 S33: .1814 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3G5Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-MAR-09. REMARK 100 THE RCSB ID CODE IS RCSB051464. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43879 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.590 REMARK 200 RESOLUTION RANGE LOW (A) : 14.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 78.8 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.59 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.65 REMARK 200 COMPLETENESS FOR SHELL (%) : 11.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.30000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.15M NA FORMATE, 15% PEG1500, REMARK 280 EVAPORATION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 41.58800 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.63350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 41.58800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.63350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4880 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 CYS B 131 REMARK 465 GLY B 132 REMARK 465 ASP B 133 REMARK 465 THR B 134 REMARK 465 THR B 135 REMARK 465 GLY B 136 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 240 O HOH B 381 1.71 REMARK 500 O HOH B 335 O HOH B 425 2.00 REMARK 500 O HOH A 241 O HOH B 333 2.07 REMARK 500 NE2 GLN B 16 O HOH B 233 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 42 -159.15 -120.78 REMARK 500 SER A 43 -161.17 -110.45 REMARK 500 SER A 77 69.54 60.82 REMARK 500 SER B 15 -5.83 74.32 REMARK 500 TYR B 33 165.80 82.60 REMARK 500 ASN B 44 -3.40 92.96 REMARK 500 PHE B 103 73.27 -119.57 REMARK 500 THR B 190 -77.08 -87.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 250 DISTANCE = 7.61 ANGSTROMS REMARK 525 HOH B 276 DISTANCE = 9.66 ANGSTROMS REMARK 525 HOH B 397 DISTANCE = 11.12 ANGSTROMS REMARK 999 REMARK 999 SEQUENCE REMARK 999 A SEQUENCE DATABASE REFERENCE FOR THIS PROTEIN REMARK 999 DOES NOT CURRENTLY EXIST. DBREF 3G5Y A 1 213 PDB 3G5Y 3G5Y 1 213 DBREF 3G5Y B 1 216 PDB 3G5Y 3G5Y 1 216 DBREF 3G5Y E 287 302 PDB 3G5Y 3G5Y 287 302 SEQRES 1 A 213 ASP ILE LEU MET THR GLN SER PRO VAL SER MET SER LEU SEQRES 2 A 213 SER LEU GLY ASP THR VAL SER ILE THR CYS HIS SER SER SEQRES 3 A 213 GLN ASP ILE SER SER ASN ILE GLY TRP LEU GLN GLN ALA SEQRES 4 A 213 PRO GLY LYS SER PHE LYS GLY LEU ILE TYR HIS GLY THR SEQRES 5 A 213 ASN LEU GLU ASP GLY VAL PRO GLY ARG PHE SER GLY SER SEQRES 6 A 213 GLY SER GLY ALA ASP TYR SER LEU THR ILE SER SER LEU SEQRES 7 A 213 SER SER GLU ASP PHE VAL ASP TYR TYR CYS VAL GLN TYR SEQRES 8 A 213 GLY GLN PHE PRO TRP THR PHE GLY GLY GLY THR SER LEU SEQRES 9 A 213 GLU ILE LYS ARG ALA ASP ALA ALA PRO THR VAL SER ILE SEQRES 10 A 213 PHE PRO PRO SER THR GLU GLN LEU THR SER GLY GLY ALA SEQRES 11 A 213 SER VAL VAL CYS PHE LEU ASN ASN PHE TYR PRO LYS ASP SEQRES 12 A 213 ILE ASN VAL LYS TRP LYS ILE ASP GLY SER GLU ARG GLN SEQRES 13 A 213 ASN GLY VAL LEU ASN SER TRP THR ASP GLN ASP SER LYS SEQRES 14 A 213 ASP SER THR TYR SER MET SER SER THR LEU THR LEU THR SEQRES 15 A 213 LYS ASP GLU TYR GLU ARG HIS ASN SER TYR THR CYS GLU SEQRES 16 A 213 ALA THR HIS LYS THR SER SER THR PRO ILE VAL LYS SER SEQRES 17 A 213 PHE ASN ARG ASN GLU SEQRES 1 B 216 ASP VAL GLN LEU GLN GLU SER GLY PRO ALA LEU VAL LYS SEQRES 2 B 216 PRO SER GLN SER LEU SER LEU THR CYS THR VAL THR GLY SEQRES 3 B 216 TYR SER ILE THR SER ASP TYR ALA TRP ASN TRP ILE ARG SEQRES 4 B 216 GLN PHE PRO GLY ASN LYS LEU GLU TRP MET GLY TYR ILE SEQRES 5 B 216 SER TYR SER ALA ASN THR ARG TYR ASN PRO SER LEU LYS SEQRES 6 B 216 SER ARG ILE SER ILE THR ARG ASP THR SER LYS ASN GLN SEQRES 7 B 216 PHE PHE LEU GLN LEU ASN SER VAL THR VAL GLU ASP THR SEQRES 8 B 216 ALA THR TYR TYR CYS ALA THR ALA GLY ARG GLY PHE PRO SEQRES 9 B 216 TYR TRP GLY GLN GLY THR LEU VAL THR VAL SER ALA ALA SEQRES 10 B 216 LYS THR THR ALA PRO SER VAL TYR PRO LEU ALA PRO VAL SEQRES 11 B 216 CYS GLY ASP THR THR GLY SER SER VAL THR LEU GLY CYS SEQRES 12 B 216 LEU VAL LYS GLY TYR PHE PRO GLU PRO VAL THR LEU THR SEQRES 13 B 216 TRP ASN SER GLY SER LEU SER SER GLY VAL HIS THR PHE SEQRES 14 B 216 PRO ALA VAL LEU GLN SER ASP LEU TYR THR LEU SER SER SEQRES 15 B 216 SER VAL THR VAL THR SER SER THR TRP PRO SER GLN SER SEQRES 16 B 216 ILE THR CYS ASN VAL ALA HIS PRO ALA SER SER THR LYS SEQRES 17 B 216 VAL ASP LYS LYS ILE GLU PRO ARG SEQRES 1 E 16 CYS GLY ALA ASP SER TYR GLU MET GLU GLU ASP GLY VAL SEQRES 2 E 16 ARG LYS CYS FORMUL 4 HOH *247(H2 O) HELIX 1 1 SER A 79 PHE A 83 5 5 HELIX 2 2 SER A 121 THR A 126 1 6 HELIX 3 3 LYS A 183 GLU A 187 1 5 HELIX 4 4 PRO B 62 LYS B 65 5 4 HELIX 5 5 THR B 87 THR B 91 5 5 HELIX 6 6 SER B 159 SER B 161 5 3 HELIX 7 7 PRO B 203 SER B 206 5 4 SHEET 1 A 4 MET A 4 SER A 7 0 SHEET 2 A 4 VAL A 19 SER A 25 -1 O HIS A 24 N THR A 5 SHEET 3 A 4 ASP A 70 ILE A 75 -1 O LEU A 73 N ILE A 21 SHEET 4 A 4 PHE A 62 SER A 67 -1 N SER A 63 O THR A 74 SHEET 1 B 6 SER A 10 LEU A 13 0 SHEET 2 B 6 THR A 102 ILE A 106 1 O GLU A 105 N MET A 11 SHEET 3 B 6 ASP A 85 GLN A 90 -1 N TYR A 86 O THR A 102 SHEET 4 B 6 ILE A 33 GLN A 38 -1 N LEU A 36 O TYR A 87 SHEET 5 B 6 PHE A 44 TYR A 49 -1 O LEU A 47 N TRP A 35 SHEET 6 B 6 ASN A 53 LEU A 54 -1 O ASN A 53 N TYR A 49 SHEET 1 C 4 SER A 10 LEU A 13 0 SHEET 2 C 4 THR A 102 ILE A 106 1 O GLU A 105 N MET A 11 SHEET 3 C 4 ASP A 85 GLN A 90 -1 N TYR A 86 O THR A 102 SHEET 4 C 4 THR A 97 PHE A 98 -1 O THR A 97 N GLN A 90 SHEET 1 D 4 THR A 114 PHE A 118 0 SHEET 2 D 4 GLY A 129 PHE A 139 -1 O ASN A 137 N THR A 114 SHEET 3 D 4 TYR A 173 THR A 182 -1 O MET A 175 N LEU A 136 SHEET 4 D 4 VAL A 159 TRP A 163 -1 N SER A 162 O SER A 176 SHEET 1 E 4 SER A 153 ARG A 155 0 SHEET 2 E 4 ILE A 144 ILE A 150 -1 N ILE A 150 O SER A 153 SHEET 3 E 4 SER A 191 HIS A 198 -1 O THR A 193 N LYS A 149 SHEET 4 E 4 ILE A 205 ASN A 210 -1 O LYS A 207 N CYS A 194 SHEET 1 F 4 GLN B 3 SER B 7 0 SHEET 2 F 4 LEU B 18 THR B 25 -1 O THR B 23 N GLN B 5 SHEET 3 F 4 GLN B 78 LEU B 83 -1 O LEU B 83 N LEU B 18 SHEET 4 F 4 ILE B 68 ASP B 73 -1 N ASP B 73 O GLN B 78 SHEET 1 G 6 LEU B 11 VAL B 12 0 SHEET 2 G 6 THR B 110 VAL B 114 1 O THR B 113 N VAL B 12 SHEET 3 G 6 ALA B 92 ALA B 99 -1 N TYR B 94 O THR B 110 SHEET 4 G 6 ALA B 34 GLN B 40 -1 N ASN B 36 O ALA B 97 SHEET 5 G 6 LEU B 46 SER B 53 -1 O GLU B 47 N ARG B 39 SHEET 6 G 6 THR B 58 TYR B 60 -1 O ARG B 59 N TYR B 51 SHEET 1 H 4 LEU B 11 VAL B 12 0 SHEET 2 H 4 THR B 110 VAL B 114 1 O THR B 113 N VAL B 12 SHEET 3 H 4 ALA B 92 ALA B 99 -1 N TYR B 94 O THR B 110 SHEET 4 H 4 TYR B 105 TRP B 106 -1 O TYR B 105 N THR B 98 SHEET 1 I 4 SER B 123 LEU B 127 0 SHEET 2 I 4 SER B 138 TYR B 148 -1 O LEU B 144 N TYR B 125 SHEET 3 I 4 LEU B 177 THR B 187 -1 O VAL B 186 N VAL B 139 SHEET 4 I 4 VAL B 166 THR B 168 -1 N HIS B 167 O SER B 183 SHEET 1 J 4 SER B 123 LEU B 127 0 SHEET 2 J 4 SER B 138 TYR B 148 -1 O LEU B 144 N TYR B 125 SHEET 3 J 4 LEU B 177 THR B 187 -1 O VAL B 186 N VAL B 139 SHEET 4 J 4 VAL B 172 GLN B 174 -1 N VAL B 172 O THR B 179 SHEET 1 K 3 THR B 154 TRP B 157 0 SHEET 2 K 3 THR B 197 HIS B 202 -1 O ASN B 199 N THR B 156 SHEET 3 K 3 THR B 207 LYS B 212 -1 O VAL B 209 N VAL B 200 SHEET 1 L 2 MET E 294 GLU E 296 0 SHEET 2 L 2 VAL E 299 LYS E 301 -1 O LYS E 301 N MET E 294 SSBOND 1 CYS A 23 CYS A 88 1555 1555 2.00 SSBOND 2 CYS A 134 CYS A 194 1555 1555 2.01 SSBOND 3 CYS B 22 CYS B 96 1555 1555 2.07 SSBOND 4 CYS B 143 CYS B 198 1555 1555 2.04 SSBOND 5 CYS E 287 CYS E 302 1555 1555 2.05 CISPEP 1 SER A 7 PRO A 8 0 -8.34 CISPEP 2 PHE A 94 PRO A 95 0 -1.38 CISPEP 3 TYR A 140 PRO A 141 0 2.34 CISPEP 4 PHE B 149 PRO B 150 0 -1.85 CISPEP 5 GLU B 151 PRO B 152 0 0.44 CISPEP 6 TRP B 191 PRO B 192 0 0.87 CRYST1 83.176 69.267 71.477 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012023 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014437 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013991 0.00000