data_3G6V # _entry.id 3G6V # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3G6V pdb_00003g6v 10.2210/pdb3g6v/pdb NDB PD1247 ? ? RCSB RCSB051497 ? ? WWPDB D_1000051497 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2fll 'Ternary complex of human DNA polymerase iota with DNA and dTTP' unspecified PDB 3G6X . unspecified PDB 3G6Y . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3G6V _pdbx_database_status.recvd_initial_deposition_date 2009-02-09 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nair, D.T.' 1 'Aggarwal, A.K.' 2 # _citation.id primary _citation.title 'DNA Synthesis across an Abasic Lesion by Human DNA Polymerase iota' _citation.journal_abbrev Structure _citation.journal_volume 17 _citation.page_first 530 _citation.page_last 537 _citation.year 2009 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19368886 _citation.pdbx_database_id_DOI 10.1016/j.str.2009.02.015 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nair, D.T.' 1 ? primary 'Johnson, R.E.' 2 ? primary 'Prakash, L.' 3 ? primary 'Prakash, S.' 4 ? primary 'Aggarwal, A.K.' 5 ? # _cell.entry_id 3G6V _cell.length_a 98.150 _cell.length_b 98.150 _cell.length_c 203.315 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3G6V _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase iota' 47027.344 1 2.7.7.7 ? ? ? 2 polymer syn 'Primer DNA strand' 2091.414 1 ? ? ? ? 3 polymer syn 'Template DNA strand' 3520.279 1 ? ? ? ? 4 non-polymer syn "ADENOSINE-5'-TRIPHOSPHATE" 507.181 1 ? ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 6 water nat water 18.015 171 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RAD30 homolog B, Eta2' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MELADVGAAASSQGVHDQVLPTPNASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMN VRDAKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNN QSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIP GIGYKTAKCLEALGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNK IEELLASLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMP FHLTLLSVCFCNLKALNTAK ; ;MELADVGAAASSQGVHDQVLPTPNASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMN VRDAKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNN QSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIP GIGYKTAKCLEALGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNK IEELLASLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMP FHLTLLSVCFCNLKALNTAK ; A ? 2 polydeoxyribonucleotide no yes '(DA)(DG)(DG)(DA)(DC)(DC)(DOC)' AGGACCC P ? 3 polydeoxyribonucleotide no yes '(DT)(DC)(DT)(DA)(3DR)(DG)(DG)(DG)(DT)(DC)(DC)(DT)' TCTANGGGTCCT T ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 LEU n 1 4 ALA n 1 5 ASP n 1 6 VAL n 1 7 GLY n 1 8 ALA n 1 9 ALA n 1 10 ALA n 1 11 SER n 1 12 SER n 1 13 GLN n 1 14 GLY n 1 15 VAL n 1 16 HIS n 1 17 ASP n 1 18 GLN n 1 19 VAL n 1 20 LEU n 1 21 PRO n 1 22 THR n 1 23 PRO n 1 24 ASN n 1 25 ALA n 1 26 SER n 1 27 SER n 1 28 ARG n 1 29 VAL n 1 30 ILE n 1 31 VAL n 1 32 HIS n 1 33 VAL n 1 34 ASP n 1 35 LEU n 1 36 ASP n 1 37 CYS n 1 38 PHE n 1 39 TYR n 1 40 ALA n 1 41 GLN n 1 42 VAL n 1 43 GLU n 1 44 MET n 1 45 ILE n 1 46 SER n 1 47 ASN n 1 48 PRO n 1 49 GLU n 1 50 LEU n 1 51 LYS n 1 52 ASP n 1 53 LYS n 1 54 PRO n 1 55 LEU n 1 56 GLY n 1 57 VAL n 1 58 GLN n 1 59 GLN n 1 60 LYS n 1 61 TYR n 1 62 LEU n 1 63 VAL n 1 64 VAL n 1 65 THR n 1 66 CYS n 1 67 ASN n 1 68 TYR n 1 69 GLU n 1 70 ALA n 1 71 ARG n 1 72 LYS n 1 73 LEU n 1 74 GLY n 1 75 VAL n 1 76 LYS n 1 77 LYS n 1 78 LEU n 1 79 MET n 1 80 ASN n 1 81 VAL n 1 82 ARG n 1 83 ASP n 1 84 ALA n 1 85 LYS n 1 86 GLU n 1 87 LYS n 1 88 CYS n 1 89 PRO n 1 90 GLN n 1 91 LEU n 1 92 VAL n 1 93 LEU n 1 94 VAL n 1 95 ASN n 1 96 GLY n 1 97 GLU n 1 98 ASP n 1 99 LEU n 1 100 THR n 1 101 ARG n 1 102 TYR n 1 103 ARG n 1 104 GLU n 1 105 MET n 1 106 SER n 1 107 TYR n 1 108 LYS n 1 109 VAL n 1 110 THR n 1 111 GLU n 1 112 LEU n 1 113 LEU n 1 114 GLU n 1 115 GLU n 1 116 PHE n 1 117 SER n 1 118 PRO n 1 119 VAL n 1 120 VAL n 1 121 GLU n 1 122 ARG n 1 123 LEU n 1 124 GLY n 1 125 PHE n 1 126 ASP n 1 127 GLU n 1 128 ASN n 1 129 PHE n 1 130 VAL n 1 131 ASP n 1 132 LEU n 1 133 THR n 1 134 GLU n 1 135 MET n 1 136 VAL n 1 137 GLU n 1 138 LYS n 1 139 ARG n 1 140 LEU n 1 141 GLN n 1 142 GLN n 1 143 LEU n 1 144 GLN n 1 145 SER n 1 146 ASP n 1 147 GLU n 1 148 LEU n 1 149 SER n 1 150 ALA n 1 151 VAL n 1 152 THR n 1 153 VAL n 1 154 SER n 1 155 GLY n 1 156 HIS n 1 157 VAL n 1 158 TYR n 1 159 ASN n 1 160 ASN n 1 161 GLN n 1 162 SER n 1 163 ILE n 1 164 ASN n 1 165 LEU n 1 166 LEU n 1 167 ASP n 1 168 VAL n 1 169 LEU n 1 170 HIS n 1 171 ILE n 1 172 ARG n 1 173 LEU n 1 174 LEU n 1 175 VAL n 1 176 GLY n 1 177 SER n 1 178 GLN n 1 179 ILE n 1 180 ALA n 1 181 ALA n 1 182 GLU n 1 183 MET n 1 184 ARG n 1 185 GLU n 1 186 ALA n 1 187 MET n 1 188 TYR n 1 189 ASN n 1 190 GLN n 1 191 LEU n 1 192 GLY n 1 193 LEU n 1 194 THR n 1 195 GLY n 1 196 CYS n 1 197 ALA n 1 198 GLY n 1 199 VAL n 1 200 ALA n 1 201 SER n 1 202 ASN n 1 203 LYS n 1 204 LEU n 1 205 LEU n 1 206 ALA n 1 207 LYS n 1 208 LEU n 1 209 VAL n 1 210 SER n 1 211 GLY n 1 212 VAL n 1 213 PHE n 1 214 LYS n 1 215 PRO n 1 216 ASN n 1 217 GLN n 1 218 GLN n 1 219 THR n 1 220 VAL n 1 221 LEU n 1 222 LEU n 1 223 PRO n 1 224 GLU n 1 225 SER n 1 226 CYS n 1 227 GLN n 1 228 HIS n 1 229 LEU n 1 230 ILE n 1 231 HIS n 1 232 SER n 1 233 LEU n 1 234 ASN n 1 235 HIS n 1 236 ILE n 1 237 LYS n 1 238 GLU n 1 239 ILE n 1 240 PRO n 1 241 GLY n 1 242 ILE n 1 243 GLY n 1 244 TYR n 1 245 LYS n 1 246 THR n 1 247 ALA n 1 248 LYS n 1 249 CYS n 1 250 LEU n 1 251 GLU n 1 252 ALA n 1 253 LEU n 1 254 GLY n 1 255 ILE n 1 256 ASN n 1 257 SER n 1 258 VAL n 1 259 ARG n 1 260 ASP n 1 261 LEU n 1 262 GLN n 1 263 THR n 1 264 PHE n 1 265 SER n 1 266 PRO n 1 267 LYS n 1 268 ILE n 1 269 LEU n 1 270 GLU n 1 271 LYS n 1 272 GLU n 1 273 LEU n 1 274 GLY n 1 275 ILE n 1 276 SER n 1 277 VAL n 1 278 ALA n 1 279 GLN n 1 280 ARG n 1 281 ILE n 1 282 GLN n 1 283 LYS n 1 284 LEU n 1 285 SER n 1 286 PHE n 1 287 GLY n 1 288 GLU n 1 289 ASP n 1 290 ASN n 1 291 SER n 1 292 PRO n 1 293 VAL n 1 294 ILE n 1 295 LEU n 1 296 SER n 1 297 GLY n 1 298 PRO n 1 299 PRO n 1 300 GLN n 1 301 SER n 1 302 PHE n 1 303 SER n 1 304 GLU n 1 305 GLU n 1 306 ASP n 1 307 SER n 1 308 PHE n 1 309 LYS n 1 310 LYS n 1 311 CYS n 1 312 SER n 1 313 SER n 1 314 GLU n 1 315 VAL n 1 316 GLU n 1 317 ALA n 1 318 LYS n 1 319 ASN n 1 320 LYS n 1 321 ILE n 1 322 GLU n 1 323 GLU n 1 324 LEU n 1 325 LEU n 1 326 ALA n 1 327 SER n 1 328 LEU n 1 329 LEU n 1 330 ASN n 1 331 ARG n 1 332 VAL n 1 333 CYS n 1 334 GLN n 1 335 ASP n 1 336 GLY n 1 337 ARG n 1 338 LYS n 1 339 PRO n 1 340 HIS n 1 341 THR n 1 342 VAL n 1 343 ARG n 1 344 LEU n 1 345 ILE n 1 346 ILE n 1 347 ARG n 1 348 ARG n 1 349 TYR n 1 350 SER n 1 351 SER n 1 352 GLU n 1 353 LYS n 1 354 HIS n 1 355 TYR n 1 356 GLY n 1 357 ARG n 1 358 GLU n 1 359 SER n 1 360 ARG n 1 361 GLN n 1 362 CYS n 1 363 PRO n 1 364 ILE n 1 365 PRO n 1 366 SER n 1 367 HIS n 1 368 VAL n 1 369 ILE n 1 370 GLN n 1 371 LYS n 1 372 LEU n 1 373 GLY n 1 374 THR n 1 375 GLY n 1 376 ASN n 1 377 TYR n 1 378 ASP n 1 379 VAL n 1 380 MET n 1 381 THR n 1 382 PRO n 1 383 MET n 1 384 VAL n 1 385 ASP n 1 386 ILE n 1 387 LEU n 1 388 MET n 1 389 LYS n 1 390 LEU n 1 391 PHE n 1 392 ARG n 1 393 ASN n 1 394 MET n 1 395 VAL n 1 396 ASN n 1 397 VAL n 1 398 LYS n 1 399 MET n 1 400 PRO n 1 401 PHE n 1 402 HIS n 1 403 LEU n 1 404 THR n 1 405 LEU n 1 406 LEU n 1 407 SER n 1 408 VAL n 1 409 CYS n 1 410 PHE n 1 411 CYS n 1 412 ASN n 1 413 LEU n 1 414 LYS n 1 415 ALA n 1 416 LEU n 1 417 ASN n 1 418 THR n 1 419 ALA n 1 420 LYS n 2 1 DA n 2 2 DG n 2 3 DG n 2 4 DA n 2 5 DC n 2 6 DC n 2 7 DOC n 3 1 DT n 3 2 DC n 3 3 DT n 3 4 DA n 3 5 3DR n 3 6 DG n 3 7 DG n 3 8 DG n 3 9 DT n 3 10 DC n 3 11 DC n 3 12 DT n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'POLI, RAD30B' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4932 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BJ5464 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector plasmid _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PBJ941 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? ? ? ? 'Oligonucleotide synthesis' 3 1 sample ? ? ? ? ? 'Oligonucleotide synthesis' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP POLI_HUMAN Q9UNA4 1 ;MELADVGAAASSQGVHDQVLPTPNASSRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKYLVVTCNYEARKLGVKKLMN VRDAKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNN QSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIP GIGYKTAKCLEALGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSSEVEAKNK IEELLASLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMP FHLTLLSVCFCNLKALNTAK ; 1 ? 2 PDB 3G6V 3G6V 2 ? ? ? 3 PDB 3G6V 3G6V 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3G6V A 1 ? 420 ? Q9UNA4 1 ? 420 ? 1 420 2 2 3G6V P 1 ? 7 ? 3G6V 867 ? 873 ? 867 873 3 3 3G6V T 1 ? 12 ? 3G6V 837 ? 847 ? 837 847 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 3DR 'DNA linking' . "1',2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE" 'ABASIC DIDEOXYRIBOSE' 'C5 H11 O6 P' 198.111 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 ATP non-polymer . "ADENOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O13 P3' 507.181 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DOC 'DNA linking' n "2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O6 P' 291.198 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3G6V _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.69 _exptl_crystal.density_percent_sol 54.19 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'Crystals grew over a period of one day, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2005-07-05 _diffrn_detector.details 'Si(111) double-crystal monochromator' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 17-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 17-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3G6V _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.2 _reflns.number_obs 29220 _reflns.number_all 30070 _reflns.percent_possible_obs 97 _reflns.pdbx_Rmerge_I_obs 0.058 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 37.6 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 10.1 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.2 _reflns_shell.d_res_low 2.28 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.428 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 37.6 _reflns_shell.pdbx_redundancy 10.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3G6V _refine.ls_number_reflns_obs 26873 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 39.22 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 96.96 _refine.ls_R_factor_obs 0.21399 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.21078 _refine.ls_R_factor_R_free 0.25146 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 8.0 _refine.ls_number_reflns_R_free 2347 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.936 _refine.correlation_coeff_Fo_to_Fc_free 0.915 _refine.B_iso_mean 26.674 _refine.aniso_B[1][1] 0.16 _refine.aniso_B[2][2] 0.16 _refine.aniso_B[3][3] -0.25 _refine.aniso_B[1][2] 0.08 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 2FLL _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.243 _refine.pdbx_overall_ESU_R_Free 0.204 _refine.overall_SU_ML 0.130 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 10.481 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2876 _refine_hist.pdbx_number_atoms_nucleic_acid 311 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.number_atoms_solvent 171 _refine_hist.number_atoms_total 3390 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 39.22 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.024 0.022 ? 3291 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.266 2.113 ? 4505 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.992 5.000 ? 370 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 38.971 24.839 ? 124 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 20.271 15.000 ? 543 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 26.714 15.000 ? 19 'X-RAY DIFFRACTION' ? r_chiral_restr 0.162 0.200 ? 527 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.010 0.021 ? 2306 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.244 0.200 ? 1365 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.304 0.200 ? 2140 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.228 0.200 ? 203 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.280 0.200 ? 22 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.313 0.200 ? 9 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.072 1.500 ? 1860 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.939 2.000 ? 2998 'X-RAY DIFFRACTION' ? r_scbond_it 3.254 3.000 ? 1431 'X-RAY DIFFRACTION' ? r_scangle_it 4.724 4.500 ? 1507 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.202 _refine_ls_shell.d_res_low 2.259 _refine_ls_shell.number_reflns_R_work 1857 _refine_ls_shell.R_factor_R_work 0.224 _refine_ls_shell.percent_reflns_obs 92.36 _refine_ls_shell.R_factor_R_free 0.276 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 149 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3G6V _struct.title 'DNA synthesis across an abasic lesion by human DNA polymerase-iota' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3G6V _struct_keywords.pdbx_keywords REPLICATION/DNA _struct_keywords.text ;DNA Polymerase, Y-family, Lesion Bypass, abasic site, ternary complex, DNA damage, DNA repair, DNA replication, DNA synthesis, DNA-binding, DNA-directed DNA polymerase, Magnesium, Metal-binding, Mutator protein, Nucleotidyltransferase, Nucleus, Schiff base, Transferase, REPLICATION-DNA COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 6 ? H N N 6 ? I N N 6 ? # _struct_biol.id 1 _struct_biol.details 'The asymmetric unit of the crystal structure contains one biological unit.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 CYS A 37 ? ASN A 47 ? CYS A 37 ASN A 47 1 ? 11 HELX_P HELX_P2 2 PRO A 48 ? LYS A 51 ? PRO A 48 LYS A 51 5 ? 4 HELX_P HELX_P3 3 ASN A 67 ? LEU A 73 ? ASN A 67 LEU A 73 1 ? 7 HELX_P HELX_P4 4 VAL A 81 ? CYS A 88 ? VAL A 81 CYS A 88 1 ? 8 HELX_P HELX_P5 5 LEU A 99 ? SER A 117 ? LEU A 99 SER A 117 1 ? 19 HELX_P HELX_P6 6 LEU A 132 ? LEU A 143 ? LEU A 132 LEU A 143 1 ? 12 HELX_P HELX_P7 7 ASP A 146 ? ALA A 150 ? ASP A 146 ALA A 150 5 ? 5 HELX_P HELX_P8 8 ASN A 159 ? GLN A 161 ? ASN A 159 GLN A 161 5 ? 3 HELX_P HELX_P9 9 ASP A 167 ? GLY A 192 ? ASP A 167 GLY A 192 1 ? 26 HELX_P HELX_P10 10 ASN A 202 ? GLY A 211 ? ASN A 202 GLY A 211 1 ? 10 HELX_P HELX_P11 11 LEU A 222 ? GLU A 224 ? LEU A 222 GLU A 224 5 ? 3 HELX_P HELX_P12 12 SER A 225 ? LEU A 233 ? SER A 225 LEU A 233 1 ? 9 HELX_P HELX_P13 13 HIS A 235 ? ILE A 239 ? HIS A 235 ILE A 239 5 ? 5 HELX_P HELX_P14 14 GLY A 243 ? LEU A 253 ? GLY A 243 LEU A 253 1 ? 11 HELX_P HELX_P15 15 SER A 257 ? PHE A 264 ? SER A 257 PHE A 264 1 ? 8 HELX_P HELX_P16 16 SER A 265 ? GLY A 274 ? SER A 265 GLY A 274 1 ? 10 HELX_P HELX_P17 17 GLY A 274 ? PHE A 286 ? GLY A 274 PHE A 286 1 ? 13 HELX_P HELX_P18 18 LYS A 318 ? ASP A 335 ? LYS A 318 ASP A 335 1 ? 18 HELX_P HELX_P19 19 PRO A 365 ? GLN A 370 ? PRO A 365 GLN A 370 1 ? 6 HELX_P HELX_P20 20 MET A 380 ? MET A 394 ? MET A 380 MET A 394 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DC 6 "O3'" ? ? ? 1_555 B DOC 7 P ? ? P DC 872 P DOC 873 1_555 ? ? ? ? ? ? ? 1.453 ? ? covale2 covale both ? C 3DR 5 "O3'" ? ? ? 1_555 C DG 6 P ? ? T 3DR 840 T DG 841 1_555 ? ? ? ? ? ? ? 1.734 ? ? metalc1 metalc ? ? A ASP 34 OD2 ? ? ? 1_555 E MG . MG ? ? A ASP 34 A MG 871 1_555 ? ? ? ? ? ? ? 2.430 ? ? metalc2 metalc ? ? A LEU 35 O ? ? ? 1_555 E MG . MG ? ? A LEU 35 A MG 871 1_555 ? ? ? ? ? ? ? 2.382 ? ? metalc3 metalc ? ? A ASP 126 OD1 ? ? ? 1_555 E MG . MG ? ? A ASP 126 A MG 871 1_555 ? ? ? ? ? ? ? 2.145 ? ? metalc4 metalc ? ? A GLU 127 OE2 ? ? ? 1_555 F MG . MG ? ? A GLU 127 A MG 872 1_555 ? ? ? ? ? ? ? 2.380 ? ? metalc5 metalc ? ? E MG . MG ? ? ? 1_555 D ATP . O2B ? ? A MG 871 A ATP 875 1_555 ? ? ? ? ? ? ? 2.351 ? ? metalc6 metalc ? ? E MG . MG ? ? ? 1_555 D ATP . O1A ? ? A MG 871 A ATP 875 1_555 ? ? ? ? ? ? ? 2.143 ? ? metalc7 metalc ? ? F MG . MG ? ? ? 1_555 D ATP . O1A ? ? A MG 872 A ATP 875 1_555 ? ? ? ? ? ? ? 2.402 ? ? hydrog1 hydrog ? ? B DA 1 N1 ? ? ? 1_555 C DT 12 N3 ? ? P DA 867 T DT 847 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DA 1 N6 ? ? ? 1_555 C DT 12 O4 ? ? P DA 867 T DT 847 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 2 N1 ? ? ? 1_555 C DC 11 N3 ? ? P DG 868 T DC 846 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DG 2 N2 ? ? ? 1_555 C DC 11 O2 ? ? P DG 868 T DC 846 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DG 2 O6 ? ? ? 1_555 C DC 11 N4 ? ? P DG 868 T DC 846 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 10 N3 ? ? P DG 869 T DC 845 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 10 O2 ? ? P DG 869 T DC 845 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 10 N4 ? ? P DG 869 T DC 845 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DA 4 N1 ? ? ? 1_555 C DT 9 N3 ? ? P DA 870 T DT 844 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DA 4 N6 ? ? ? 1_555 C DT 9 O4 ? ? P DA 870 T DT 844 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DC 5 N3 ? ? ? 1_555 C DG 8 N1 ? ? P DC 871 T DG 843 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 5 N4 ? ? ? 1_555 C DG 8 O6 ? ? P DC 871 T DG 843 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DC 5 O2 ? ? ? 1_555 C DG 8 N2 ? ? P DC 871 T DG 843 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 6 N3 ? ? ? 1_555 C DG 7 N1 ? ? P DC 872 T DG 842 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 6 N4 ? ? ? 1_555 C DG 7 O6 ? ? P DC 872 T DG 842 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 6 O2 ? ? ? 1_555 C DG 7 N2 ? ? P DC 872 T DG 842 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DOC 7 N3 ? ? ? 1_555 C DG 6 N1 ? ? P DOC 873 T DG 841 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DOC 7 N4 ? ? ? 1_555 C DG 6 O6 ? ? P DOC 873 T DG 841 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DOC 7 O2 ? ? ? 1_555 C DG 6 N2 ? ? P DOC 873 T DG 841 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LYS _struct_mon_prot_cis.label_seq_id 214 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LYS _struct_mon_prot_cis.auth_seq_id 214 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 215 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 215 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -7.71 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 4 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 120 ? LEU A 123 ? VAL A 120 LEU A 123 A 2 GLU A 127 ? ASP A 131 ? GLU A 127 ASP A 131 A 3 ILE A 30 ? LEU A 35 ? ILE A 30 LEU A 35 A 4 GLY A 195 ? ALA A 200 ? GLY A 195 ALA A 200 A 5 GLN A 218 ? VAL A 220 ? GLN A 218 VAL A 220 A 6 HIS A 156 ? VAL A 157 ? HIS A 156 VAL A 157 B 1 MET A 79 ? ASN A 80 ? MET A 79 ASN A 80 B 2 LEU A 62 ? CYS A 66 ? LEU A 62 CYS A 66 B 3 LEU A 55 ? GLN A 59 ? LEU A 55 GLN A 59 B 4 VAL A 92 ? ASN A 95 ? VAL A 92 ASN A 95 C 1 SER A 301 ? SER A 307 ? SER A 301 SER A 307 C 2 LEU A 405 ? LYS A 414 ? LEU A 405 LYS A 414 C 3 LYS A 338 ? ARG A 347 ? LYS A 338 ARG A 347 C 4 GLU A 358 ? PRO A 363 ? GLU A 358 PRO A 363 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 123 ? N LEU A 123 O GLU A 127 ? O GLU A 127 A 2 3 O ASN A 128 ? O ASN A 128 N VAL A 33 ? N VAL A 33 A 3 4 N ASP A 34 ? N ASP A 34 O CYS A 196 ? O CYS A 196 A 4 5 N VAL A 199 ? N VAL A 199 O THR A 219 ? O THR A 219 A 5 6 O GLN A 218 ? O GLN A 218 N HIS A 156 ? N HIS A 156 B 1 2 O MET A 79 ? O MET A 79 N VAL A 63 ? N VAL A 63 B 2 3 O THR A 65 ? O THR A 65 N VAL A 57 ? N VAL A 57 B 3 4 N GLY A 56 ? N GLY A 56 O VAL A 92 ? O VAL A 92 C 1 2 N PHE A 302 ? N PHE A 302 O PHE A 410 ? O PHE A 410 C 2 3 O SER A 407 ? O SER A 407 N ILE A 345 ? N ILE A 345 C 3 4 N ILE A 346 ? N ILE A 346 O GLU A 358 ? O GLU A 358 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ATP 875 ? 21 'BINDING SITE FOR RESIDUE ATP A 875' AC2 Software A MG 871 ? 5 'BINDING SITE FOR RESIDUE MG A 871' AC3 Software A MG 872 ? 5 'BINDING SITE FOR RESIDUE MG A 872' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 21 ASP A 34 ? ASP A 34 . ? 1_555 ? 2 AC1 21 LEU A 35 ? LEU A 35 . ? 1_555 ? 3 AC1 21 ASP A 36 ? ASP A 36 . ? 1_555 ? 4 AC1 21 CYS A 37 ? CYS A 37 . ? 1_555 ? 5 AC1 21 PHE A 38 ? PHE A 38 . ? 1_555 ? 6 AC1 21 TYR A 39 ? TYR A 39 . ? 1_555 ? 7 AC1 21 GLN A 59 ? GLN A 59 . ? 1_555 ? 8 AC1 21 THR A 65 ? THR A 65 . ? 1_555 ? 9 AC1 21 TYR A 68 ? TYR A 68 . ? 1_555 ? 10 AC1 21 ARG A 71 ? ARG A 71 . ? 1_555 ? 11 AC1 21 LYS A 77 ? LYS A 77 . ? 1_555 ? 12 AC1 21 ASP A 126 ? ASP A 126 . ? 1_555 ? 13 AC1 21 LYS A 214 ? LYS A 214 . ? 1_555 ? 14 AC1 21 MG E . ? MG A 871 . ? 1_555 ? 15 AC1 21 MG F . ? MG A 872 . ? 1_555 ? 16 AC1 21 HOH G . ? HOH A 903 . ? 1_555 ? 17 AC1 21 HOH G . ? HOH A 932 . ? 1_555 ? 18 AC1 21 HOH G . ? HOH A 964 . ? 1_555 ? 19 AC1 21 HOH G . ? HOH A 1118 . ? 1_555 ? 20 AC1 21 DOC B 7 ? DOC P 873 . ? 1_555 ? 21 AC1 21 DG C 6 ? DG T 841 . ? 1_555 ? 22 AC2 5 ASP A 34 ? ASP A 34 . ? 1_555 ? 23 AC2 5 LEU A 35 ? LEU A 35 . ? 1_555 ? 24 AC2 5 ASP A 126 ? ASP A 126 . ? 1_555 ? 25 AC2 5 MG F . ? MG A 872 . ? 1_555 ? 26 AC2 5 ATP D . ? ATP A 875 . ? 1_555 ? 27 AC3 5 ASP A 34 ? ASP A 34 . ? 1_555 ? 28 AC3 5 GLU A 127 ? GLU A 127 . ? 1_555 ? 29 AC3 5 MG E . ? MG A 871 . ? 1_555 ? 30 AC3 5 ATP D . ? ATP A 875 . ? 1_555 ? 31 AC3 5 HOH G . ? HOH A 932 . ? 1_555 ? # _database_PDB_matrix.entry_id 3G6V _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3G6V _atom_sites.fract_transf_matrix[1][1] 0.010188 _atom_sites.fract_transf_matrix[1][2] 0.005882 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011765 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004918 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 GLU 2 2 ? ? ? A . n A 1 3 LEU 3 3 ? ? ? A . n A 1 4 ALA 4 4 ? ? ? A . n A 1 5 ASP 5 5 ? ? ? A . n A 1 6 VAL 6 6 ? ? ? A . n A 1 7 GLY 7 7 ? ? ? A . n A 1 8 ALA 8 8 ? ? ? A . n A 1 9 ALA 9 9 ? ? ? A . n A 1 10 ALA 10 10 ? ? ? A . n A 1 11 SER 11 11 ? ? ? A . n A 1 12 SER 12 12 ? ? ? A . n A 1 13 GLN 13 13 ? ? ? A . n A 1 14 GLY 14 14 ? ? ? A . n A 1 15 VAL 15 15 ? ? ? A . n A 1 16 HIS 16 16 ? ? ? A . n A 1 17 ASP 17 17 ? ? ? A . n A 1 18 GLN 18 18 ? ? ? A . n A 1 19 VAL 19 19 ? ? ? A . n A 1 20 LEU 20 20 ? ? ? A . n A 1 21 PRO 21 21 ? ? ? A . n A 1 22 THR 22 22 ? ? ? A . n A 1 23 PRO 23 23 ? ? ? A . n A 1 24 ASN 24 24 ? ? ? A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 HIS 32 32 32 HIS HIS A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 ASP 36 36 36 ASP ASP A . n A 1 37 CYS 37 37 37 CYS CYS A . n A 1 38 PHE 38 38 38 PHE PHE A . n A 1 39 TYR 39 39 39 TYR TYR A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 MET 44 44 44 MET MET A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 ASN 47 47 47 ASN ASN A . n A 1 48 PRO 48 48 48 PRO PRO A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 LYS 53 53 53 LYS LYS A . n A 1 54 PRO 54 54 54 PRO PRO A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 GLN 59 59 59 GLN GLN A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 TYR 61 61 61 TYR TYR A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 THR 65 65 65 THR THR A . n A 1 66 CYS 66 66 66 CYS CYS A . n A 1 67 ASN 67 67 67 ASN ASN A . n A 1 68 TYR 68 68 68 TYR TYR A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 MET 79 79 79 MET MET A . n A 1 80 ASN 80 80 80 ASN ASN A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 ASP 83 83 83 ASP ASP A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 CYS 88 88 88 CYS CYS A . n A 1 89 PRO 89 89 89 PRO PRO A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 VAL 94 94 94 VAL VAL A . n A 1 95 ASN 95 95 95 ASN ASN A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 LEU 99 99 99 LEU LEU A . n A 1 100 THR 100 100 100 THR THR A . n A 1 101 ARG 101 101 101 ARG ARG A . n A 1 102 TYR 102 102 102 TYR TYR A . n A 1 103 ARG 103 103 103 ARG ARG A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 MET 105 105 105 MET MET A . n A 1 106 SER 106 106 106 SER SER A . n A 1 107 TYR 107 107 107 TYR TYR A . n A 1 108 LYS 108 108 108 LYS LYS A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 THR 110 110 110 THR THR A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 LEU 113 113 113 LEU LEU A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 GLU 115 115 115 GLU GLU A . n A 1 116 PHE 116 116 116 PHE PHE A . n A 1 117 SER 117 117 117 SER SER A . n A 1 118 PRO 118 118 118 PRO PRO A . n A 1 119 VAL 119 119 119 VAL VAL A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 GLU 121 121 121 GLU GLU A . n A 1 122 ARG 122 122 122 ARG ARG A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 GLY 124 124 124 GLY GLY A . n A 1 125 PHE 125 125 125 PHE PHE A . n A 1 126 ASP 126 126 126 ASP ASP A . n A 1 127 GLU 127 127 127 GLU GLU A . n A 1 128 ASN 128 128 128 ASN ASN A . n A 1 129 PHE 129 129 129 PHE PHE A . n A 1 130 VAL 130 130 130 VAL VAL A . n A 1 131 ASP 131 131 131 ASP ASP A . n A 1 132 LEU 132 132 132 LEU LEU A . n A 1 133 THR 133 133 133 THR THR A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 MET 135 135 135 MET MET A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 GLU 137 137 137 GLU GLU A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 ARG 139 139 139 ARG ARG A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 GLN 141 141 141 GLN GLN A . n A 1 142 GLN 142 142 142 GLN GLN A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 GLN 144 144 144 GLN GLN A . n A 1 145 SER 145 145 145 SER SER A . n A 1 146 ASP 146 146 146 ASP ALA A . n A 1 147 GLU 147 147 147 GLU GLU A . n A 1 148 LEU 148 148 148 LEU LEU A . n A 1 149 SER 149 149 149 SER SER A . n A 1 150 ALA 150 150 150 ALA ALA A . n A 1 151 VAL 151 151 151 VAL VAL A . n A 1 152 THR 152 152 152 THR THR A . n A 1 153 VAL 153 153 153 VAL VAL A . n A 1 154 SER 154 154 154 SER SER A . n A 1 155 GLY 155 155 155 GLY GLY A . n A 1 156 HIS 156 156 156 HIS HIS A . n A 1 157 VAL 157 157 157 VAL VAL A . n A 1 158 TYR 158 158 158 TYR TYR A . n A 1 159 ASN 159 159 159 ASN ASN A . n A 1 160 ASN 160 160 160 ASN ASN A . n A 1 161 GLN 161 161 161 GLN GLN A . n A 1 162 SER 162 162 162 SER SER A . n A 1 163 ILE 163 163 163 ILE ILE A . n A 1 164 ASN 164 164 164 ASN ASN A . n A 1 165 LEU 165 165 165 LEU LEU A . n A 1 166 LEU 166 166 166 LEU LEU A . n A 1 167 ASP 167 167 167 ASP ASP A . n A 1 168 VAL 168 168 168 VAL VAL A . n A 1 169 LEU 169 169 169 LEU LEU A . n A 1 170 HIS 170 170 170 HIS HIS A . n A 1 171 ILE 171 171 171 ILE ILE A . n A 1 172 ARG 172 172 172 ARG ARG A . n A 1 173 LEU 173 173 173 LEU LEU A . n A 1 174 LEU 174 174 174 LEU LEU A . n A 1 175 VAL 175 175 175 VAL VAL A . n A 1 176 GLY 176 176 176 GLY GLY A . n A 1 177 SER 177 177 177 SER SER A . n A 1 178 GLN 178 178 178 GLN GLN A . n A 1 179 ILE 179 179 179 ILE ILE A . n A 1 180 ALA 180 180 180 ALA ALA A . n A 1 181 ALA 181 181 181 ALA ALA A . n A 1 182 GLU 182 182 182 GLU GLU A . n A 1 183 MET 183 183 183 MET MET A . n A 1 184 ARG 184 184 184 ARG ARG A . n A 1 185 GLU 185 185 185 GLU GLU A . n A 1 186 ALA 186 186 186 ALA ALA A . n A 1 187 MET 187 187 187 MET MET A . n A 1 188 TYR 188 188 188 TYR TYR A . n A 1 189 ASN 189 189 189 ASN ASN A . n A 1 190 GLN 190 190 190 GLN GLN A . n A 1 191 LEU 191 191 191 LEU LEU A . n A 1 192 GLY 192 192 192 GLY GLY A . n A 1 193 LEU 193 193 193 LEU LEU A . n A 1 194 THR 194 194 194 THR THR A . n A 1 195 GLY 195 195 195 GLY GLY A . n A 1 196 CYS 196 196 196 CYS CYS A . n A 1 197 ALA 197 197 197 ALA ALA A . n A 1 198 GLY 198 198 198 GLY GLY A . n A 1 199 VAL 199 199 199 VAL VAL A . n A 1 200 ALA 200 200 200 ALA ALA A . n A 1 201 SER 201 201 201 SER SER A . n A 1 202 ASN 202 202 202 ASN ASN A . n A 1 203 LYS 203 203 203 LYS LYS A . n A 1 204 LEU 204 204 204 LEU LEU A . n A 1 205 LEU 205 205 205 LEU LEU A . n A 1 206 ALA 206 206 206 ALA ALA A . n A 1 207 LYS 207 207 207 LYS LYS A . n A 1 208 LEU 208 208 208 LEU LEU A . n A 1 209 VAL 209 209 209 VAL VAL A . n A 1 210 SER 210 210 210 SER SER A . n A 1 211 GLY 211 211 211 GLY GLY A . n A 1 212 VAL 212 212 212 VAL VAL A . n A 1 213 PHE 213 213 213 PHE PHE A . n A 1 214 LYS 214 214 214 LYS LYS A . n A 1 215 PRO 215 215 215 PRO PRO A . n A 1 216 ASN 216 216 216 ASN ASN A . n A 1 217 GLN 217 217 217 GLN GLN A . n A 1 218 GLN 218 218 218 GLN GLN A . n A 1 219 THR 219 219 219 THR THR A . n A 1 220 VAL 220 220 220 VAL VAL A . n A 1 221 LEU 221 221 221 LEU LEU A . n A 1 222 LEU 222 222 222 LEU LEU A . n A 1 223 PRO 223 223 223 PRO PRO A . n A 1 224 GLU 224 224 224 GLU GLU A . n A 1 225 SER 225 225 225 SER SER A . n A 1 226 CYS 226 226 226 CYS CYS A . n A 1 227 GLN 227 227 227 GLN GLN A . n A 1 228 HIS 228 228 228 HIS HIS A . n A 1 229 LEU 229 229 229 LEU LEU A . n A 1 230 ILE 230 230 230 ILE ILE A . n A 1 231 HIS 231 231 231 HIS HIS A . n A 1 232 SER 232 232 232 SER SER A . n A 1 233 LEU 233 233 233 LEU LEU A . n A 1 234 ASN 234 234 234 ASN ASN A . n A 1 235 HIS 235 235 235 HIS HIS A . n A 1 236 ILE 236 236 236 ILE ILE A . n A 1 237 LYS 237 237 237 LYS LYS A . n A 1 238 GLU 238 238 238 GLU GLU A . n A 1 239 ILE 239 239 239 ILE ILE A . n A 1 240 PRO 240 240 240 PRO PRO A . n A 1 241 GLY 241 241 241 GLY GLY A . n A 1 242 ILE 242 242 242 ILE ILE A . n A 1 243 GLY 243 243 243 GLY GLY A . n A 1 244 TYR 244 244 244 TYR TYR A . n A 1 245 LYS 245 245 245 LYS ALA A . n A 1 246 THR 246 246 246 THR THR A . n A 1 247 ALA 247 247 247 ALA ALA A . n A 1 248 LYS 248 248 248 LYS LYS A . n A 1 249 CYS 249 249 249 CYS CYS A . n A 1 250 LEU 250 250 250 LEU LEU A . n A 1 251 GLU 251 251 251 GLU GLU A . n A 1 252 ALA 252 252 252 ALA ALA A . n A 1 253 LEU 253 253 253 LEU LEU A . n A 1 254 GLY 254 254 254 GLY GLY A . n A 1 255 ILE 255 255 255 ILE ILE A . n A 1 256 ASN 256 256 256 ASN ASN A . n A 1 257 SER 257 257 257 SER SER A . n A 1 258 VAL 258 258 258 VAL VAL A . n A 1 259 ARG 259 259 259 ARG ARG A . n A 1 260 ASP 260 260 260 ASP ASP A . n A 1 261 LEU 261 261 261 LEU LEU A . n A 1 262 GLN 262 262 262 GLN GLN A . n A 1 263 THR 263 263 263 THR THR A . n A 1 264 PHE 264 264 264 PHE PHE A . n A 1 265 SER 265 265 265 SER SER A . n A 1 266 PRO 266 266 266 PRO PRO A . n A 1 267 LYS 267 267 267 LYS LYS A . n A 1 268 ILE 268 268 268 ILE ILE A . n A 1 269 LEU 269 269 269 LEU LEU A . n A 1 270 GLU 270 270 270 GLU GLU A . n A 1 271 LYS 271 271 271 LYS ALA A . n A 1 272 GLU 272 272 272 GLU GLU A . n A 1 273 LEU 273 273 273 LEU LEU A . n A 1 274 GLY 274 274 274 GLY GLY A . n A 1 275 ILE 275 275 275 ILE ILE A . n A 1 276 SER 276 276 276 SER SER A . n A 1 277 VAL 277 277 277 VAL VAL A . n A 1 278 ALA 278 278 278 ALA ALA A . n A 1 279 GLN 279 279 279 GLN GLN A . n A 1 280 ARG 280 280 280 ARG ARG A . n A 1 281 ILE 281 281 281 ILE ILE A . n A 1 282 GLN 282 282 282 GLN GLN A . n A 1 283 LYS 283 283 283 LYS LYS A . n A 1 284 LEU 284 284 284 LEU LEU A . n A 1 285 SER 285 285 285 SER SER A . n A 1 286 PHE 286 286 286 PHE PHE A . n A 1 287 GLY 287 287 287 GLY GLY A . n A 1 288 GLU 288 288 288 GLU GLU A . n A 1 289 ASP 289 289 289 ASP ASP A . n A 1 290 ASN 290 290 290 ASN ASN A . n A 1 291 SER 291 291 291 SER SER A . n A 1 292 PRO 292 292 292 PRO PRO A . n A 1 293 VAL 293 293 293 VAL VAL A . n A 1 294 ILE 294 294 294 ILE ILE A . n A 1 295 LEU 295 295 295 LEU LEU A . n A 1 296 SER 296 296 296 SER SER A . n A 1 297 GLY 297 297 297 GLY GLY A . n A 1 298 PRO 298 298 298 PRO PRO A . n A 1 299 PRO 299 299 299 PRO PRO A . n A 1 300 GLN 300 300 300 GLN GLN A . n A 1 301 SER 301 301 301 SER SER A . n A 1 302 PHE 302 302 302 PHE PHE A . n A 1 303 SER 303 303 303 SER SER A . n A 1 304 GLU 304 304 304 GLU GLU A . n A 1 305 GLU 305 305 305 GLU GLU A . n A 1 306 ASP 306 306 306 ASP ASP A . n A 1 307 SER 307 307 307 SER SER A . n A 1 308 PHE 308 308 308 PHE PHE A . n A 1 309 LYS 309 309 309 LYS LYS A . n A 1 310 LYS 310 310 310 LYS LYS A . n A 1 311 CYS 311 311 311 CYS CYS A . n A 1 312 SER 312 312 312 SER SER A . n A 1 313 SER 313 313 313 SER SER A . n A 1 314 GLU 314 314 314 GLU GLU A . n A 1 315 VAL 315 315 315 VAL ALA A . n A 1 316 GLU 316 316 316 GLU ALA A . n A 1 317 ALA 317 317 317 ALA ALA A . n A 1 318 LYS 318 318 318 LYS LYS A . n A 1 319 ASN 319 319 319 ASN ASN A . n A 1 320 LYS 320 320 320 LYS LYS A . n A 1 321 ILE 321 321 321 ILE ILE A . n A 1 322 GLU 322 322 322 GLU GLU A . n A 1 323 GLU 323 323 323 GLU GLU A . n A 1 324 LEU 324 324 324 LEU LEU A . n A 1 325 LEU 325 325 325 LEU LEU A . n A 1 326 ALA 326 326 326 ALA ALA A . n A 1 327 SER 327 327 327 SER SER A . n A 1 328 LEU 328 328 328 LEU LEU A . n A 1 329 LEU 329 329 329 LEU LEU A . n A 1 330 ASN 330 330 330 ASN ASN A . n A 1 331 ARG 331 331 331 ARG ARG A . n A 1 332 VAL 332 332 332 VAL VAL A . n A 1 333 CYS 333 333 333 CYS CYS A . n A 1 334 GLN 334 334 334 GLN GLN A . n A 1 335 ASP 335 335 335 ASP ASP A . n A 1 336 GLY 336 336 336 GLY GLY A . n A 1 337 ARG 337 337 337 ARG ARG A . n A 1 338 LYS 338 338 338 LYS ALA A . n A 1 339 PRO 339 339 339 PRO PRO A . n A 1 340 HIS 340 340 340 HIS HIS A . n A 1 341 THR 341 341 341 THR THR A . n A 1 342 VAL 342 342 342 VAL VAL A . n A 1 343 ARG 343 343 343 ARG ARG A . n A 1 344 LEU 344 344 344 LEU LEU A . n A 1 345 ILE 345 345 345 ILE ILE A . n A 1 346 ILE 346 346 346 ILE ILE A . n A 1 347 ARG 347 347 347 ARG ARG A . n A 1 348 ARG 348 348 348 ARG ARG A . n A 1 349 TYR 349 349 349 TYR ALA A . n A 1 350 SER 350 350 350 SER ALA A . n A 1 351 SER 351 351 351 SER ALA A . n A 1 352 GLU 352 352 352 GLU ALA A . n A 1 353 LYS 353 353 353 LYS ALA A . n A 1 354 HIS 354 354 354 HIS ALA A . n A 1 355 TYR 355 355 355 TYR ALA A . n A 1 356 GLY 356 356 356 GLY GLY A . n A 1 357 ARG 357 357 357 ARG ARG A . n A 1 358 GLU 358 358 358 GLU GLU A . n A 1 359 SER 359 359 359 SER SER A . n A 1 360 ARG 360 360 360 ARG ARG A . n A 1 361 GLN 361 361 361 GLN GLN A . n A 1 362 CYS 362 362 362 CYS CYS A . n A 1 363 PRO 363 363 363 PRO PRO A . n A 1 364 ILE 364 364 364 ILE ILE A . n A 1 365 PRO 365 365 365 PRO PRO A . n A 1 366 SER 366 366 366 SER SER A . n A 1 367 HIS 367 367 367 HIS ALA A . n A 1 368 VAL 368 368 368 VAL VAL A . n A 1 369 ILE 369 369 369 ILE ILE A . n A 1 370 GLN 370 370 370 GLN GLN A . n A 1 371 LYS 371 371 ? ? ? A . n A 1 372 LEU 372 372 ? ? ? A . n A 1 373 GLY 373 373 ? ? ? A . n A 1 374 THR 374 374 ? ? ? A . n A 1 375 GLY 375 375 ? ? ? A . n A 1 376 ASN 376 376 ? ? ? A . n A 1 377 TYR 377 377 ? ? ? A . n A 1 378 ASP 378 378 ? ? ? A . n A 1 379 VAL 379 379 379 VAL ALA A . n A 1 380 MET 380 380 380 MET MET A . n A 1 381 THR 381 381 381 THR THR A . n A 1 382 PRO 382 382 382 PRO PRO A . n A 1 383 MET 383 383 383 MET MET A . n A 1 384 VAL 384 384 384 VAL VAL A . n A 1 385 ASP 385 385 385 ASP ASP A . n A 1 386 ILE 386 386 386 ILE ALA A . n A 1 387 LEU 387 387 387 LEU LEU A . n A 1 388 MET 388 388 388 MET MET A . n A 1 389 LYS 389 389 389 LYS ALA A . n A 1 390 LEU 390 390 390 LEU LEU A . n A 1 391 PHE 391 391 391 PHE PHE A . n A 1 392 ARG 392 392 392 ARG ARG A . n A 1 393 ASN 393 393 393 ASN ASN A . n A 1 394 MET 394 394 394 MET MET A . n A 1 395 VAL 395 395 ? ? ? A . n A 1 396 ASN 396 396 ? ? ? A . n A 1 397 VAL 397 397 ? ? ? A . n A 1 398 LYS 398 398 ? ? ? A . n A 1 399 MET 399 399 ? ? ? A . n A 1 400 PRO 400 400 ? ? ? A . n A 1 401 PHE 401 401 ? ? ? A . n A 1 402 HIS 402 402 ? ? ? A . n A 1 403 LEU 403 403 ? ? ? A . n A 1 404 THR 404 404 404 THR THR A . n A 1 405 LEU 405 405 405 LEU ALA A . n A 1 406 LEU 406 406 406 LEU LEU A . n A 1 407 SER 407 407 407 SER SER A . n A 1 408 VAL 408 408 408 VAL VAL A . n A 1 409 CYS 409 409 409 CYS CYS A . n A 1 410 PHE 410 410 410 PHE PHE A . n A 1 411 CYS 411 411 411 CYS CYS A . n A 1 412 ASN 412 412 412 ASN ASN A . n A 1 413 LEU 413 413 413 LEU LEU A . n A 1 414 LYS 414 414 414 LYS LYS A . n A 1 415 ALA 415 415 ? ? ? A . n A 1 416 LEU 416 416 ? ? ? A . n A 1 417 ASN 417 417 ? ? ? A . n A 1 418 THR 418 418 ? ? ? A . n A 1 419 ALA 419 419 ? ? ? A . n A 1 420 LYS 420 420 ? ? ? A . n B 2 1 DA 1 867 867 DA A P . n B 2 2 DG 2 868 868 DG G P . n B 2 3 DG 3 869 869 DG G P . n B 2 4 DA 4 870 870 DA A P . n B 2 5 DC 5 871 871 DC C P . n B 2 6 DC 6 872 872 DC C P . n B 2 7 DOC 7 873 873 DOC DOC P . n C 3 1 DT 1 837 ? ? ? T . n C 3 2 DC 2 838 ? ? ? T . n C 3 3 DT 3 839 839 DT T T . n C 3 4 DA 4 839 ? ? ? T A n C 3 5 3DR 5 840 840 3DR 3DR T . n C 3 6 DG 6 841 841 DG G T . n C 3 7 DG 7 842 842 DG G T . n C 3 8 DG 8 843 843 DG G T . n C 3 9 DT 9 844 844 DT T T . n C 3 10 DC 10 845 845 DC C T . n C 3 11 DC 11 846 846 DC C T . n C 3 12 DT 12 847 847 DT T T . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ATP 1 875 875 ATP ATP A . E 5 MG 1 871 871 MG MG A . F 5 MG 1 872 872 MG MG A . G 6 HOH 1 902 902 HOH HOH A . G 6 HOH 2 903 903 HOH HOH A . G 6 HOH 3 904 904 HOH HOH A . G 6 HOH 4 905 905 HOH HOH A . G 6 HOH 5 906 906 HOH HOH A . G 6 HOH 6 909 909 HOH HOH A . G 6 HOH 7 910 910 HOH HOH A . G 6 HOH 8 911 911 HOH HOH A . G 6 HOH 9 912 912 HOH HOH A . G 6 HOH 10 915 915 HOH HOH A . G 6 HOH 11 916 916 HOH HOH A . G 6 HOH 12 918 918 HOH HOH A . G 6 HOH 13 919 919 HOH HOH A . G 6 HOH 14 920 920 HOH HOH A . G 6 HOH 15 923 923 HOH HOH A . G 6 HOH 16 924 924 HOH HOH A . G 6 HOH 17 925 925 HOH HOH A . G 6 HOH 18 926 926 HOH HOH A . G 6 HOH 19 928 928 HOH HOH A . G 6 HOH 20 929 929 HOH HOH A . G 6 HOH 21 930 930 HOH HOH A . G 6 HOH 22 932 932 HOH HOH A . G 6 HOH 23 933 933 HOH HOH A . G 6 HOH 24 934 934 HOH HOH A . G 6 HOH 25 935 935 HOH HOH A . G 6 HOH 26 936 936 HOH HOH A . G 6 HOH 27 939 939 HOH HOH A . G 6 HOH 28 940 940 HOH HOH A . G 6 HOH 29 941 941 HOH HOH A . G 6 HOH 30 946 946 HOH HOH A . G 6 HOH 31 948 948 HOH HOH A . G 6 HOH 32 950 950 HOH HOH A . G 6 HOH 33 951 951 HOH HOH A . G 6 HOH 34 953 953 HOH HOH A . G 6 HOH 35 954 954 HOH HOH A . G 6 HOH 36 955 955 HOH HOH A . G 6 HOH 37 956 956 HOH HOH A . G 6 HOH 38 957 957 HOH HOH A . G 6 HOH 39 958 958 HOH HOH A . G 6 HOH 40 959 959 HOH HOH A . G 6 HOH 41 960 960 HOH HOH A . G 6 HOH 42 961 961 HOH HOH A . G 6 HOH 43 962 962 HOH HOH A . G 6 HOH 44 963 963 HOH HOH A . G 6 HOH 45 964 964 HOH HOH A . G 6 HOH 46 965 965 HOH HOH A . G 6 HOH 47 966 966 HOH HOH A . G 6 HOH 48 967 967 HOH HOH A . G 6 HOH 49 968 968 HOH HOH A . G 6 HOH 50 969 969 HOH HOH A . G 6 HOH 51 970 970 HOH HOH A . G 6 HOH 52 973 973 HOH HOH A . G 6 HOH 53 974 974 HOH HOH A . G 6 HOH 54 975 975 HOH HOH A . G 6 HOH 55 976 976 HOH HOH A . G 6 HOH 56 979 979 HOH HOH A . G 6 HOH 57 980 980 HOH HOH A . G 6 HOH 58 984 984 HOH HOH A . G 6 HOH 59 986 986 HOH HOH A . G 6 HOH 60 988 988 HOH HOH A . G 6 HOH 61 990 990 HOH HOH A . G 6 HOH 62 991 991 HOH HOH A . G 6 HOH 63 994 994 HOH HOH A . G 6 HOH 64 995 995 HOH HOH A . G 6 HOH 65 997 997 HOH HOH A . G 6 HOH 66 1000 1000 HOH HOH A . G 6 HOH 67 1003 1003 HOH HOH A . G 6 HOH 68 1004 1004 HOH HOH A . G 6 HOH 69 1005 1005 HOH HOH A . G 6 HOH 70 1006 1006 HOH HOH A . G 6 HOH 71 1007 1007 HOH HOH A . G 6 HOH 72 1008 1008 HOH HOH A . G 6 HOH 73 1009 1009 HOH HOH A . G 6 HOH 74 1010 1010 HOH HOH A . G 6 HOH 75 1011 1011 HOH HOH A . G 6 HOH 76 1012 1012 HOH HOH A . G 6 HOH 77 1013 1013 HOH HOH A . G 6 HOH 78 1014 1014 HOH HOH A . G 6 HOH 79 1015 1015 HOH HOH A . G 6 HOH 80 1016 1016 HOH HOH A . G 6 HOH 81 1018 1018 HOH HOH A . G 6 HOH 82 1019 1019 HOH HOH A . G 6 HOH 83 1020 1020 HOH HOH A . G 6 HOH 84 1021 1021 HOH HOH A . G 6 HOH 85 1022 1022 HOH HOH A . G 6 HOH 86 1023 1023 HOH HOH A . G 6 HOH 87 1025 1025 HOH HOH A . G 6 HOH 88 1026 1026 HOH HOH A . G 6 HOH 89 1027 1027 HOH HOH A . G 6 HOH 90 1031 1031 HOH HOH A . G 6 HOH 91 1032 1032 HOH HOH A . G 6 HOH 92 1036 1036 HOH HOH A . G 6 HOH 93 1037 1037 HOH HOH A . G 6 HOH 94 1039 1039 HOH HOH A . G 6 HOH 95 1041 1041 HOH HOH A . G 6 HOH 96 1042 1042 HOH HOH A . G 6 HOH 97 1043 1043 HOH HOH A . G 6 HOH 98 1045 1045 HOH HOH A . G 6 HOH 99 1046 1046 HOH HOH A . G 6 HOH 100 1047 1047 HOH HOH A . G 6 HOH 101 1048 1048 HOH HOH A . G 6 HOH 102 1049 1049 HOH HOH A . G 6 HOH 103 1050 1050 HOH HOH A . G 6 HOH 104 1051 1051 HOH HOH A . G 6 HOH 105 1052 1052 HOH HOH A . G 6 HOH 106 1053 1053 HOH HOH A . G 6 HOH 107 1054 1054 HOH HOH A . G 6 HOH 108 1056 1056 HOH HOH A . G 6 HOH 109 1059 1059 HOH HOH A . G 6 HOH 110 1061 1061 HOH HOH A . G 6 HOH 111 1062 1062 HOH HOH A . G 6 HOH 112 1063 1063 HOH HOH A . G 6 HOH 113 1064 1064 HOH HOH A . G 6 HOH 114 1065 1065 HOH HOH A . G 6 HOH 115 1066 1066 HOH HOH A . G 6 HOH 116 1067 1067 HOH HOH A . G 6 HOH 117 1068 1068 HOH HOH A . G 6 HOH 118 1070 1070 HOH HOH A . G 6 HOH 119 1071 1071 HOH HOH A . G 6 HOH 120 1073 1073 HOH HOH A . G 6 HOH 121 1075 1075 HOH HOH A . G 6 HOH 122 1077 1077 HOH HOH A . G 6 HOH 123 1078 1078 HOH HOH A . G 6 HOH 124 1079 1079 HOH HOH A . G 6 HOH 125 1081 1081 HOH HOH A . G 6 HOH 126 1082 1082 HOH HOH A . G 6 HOH 127 1083 1083 HOH HOH A . G 6 HOH 128 1084 1084 HOH HOH A . G 6 HOH 129 1086 1086 HOH HOH A . G 6 HOH 130 1087 1087 HOH HOH A . G 6 HOH 131 1090 1090 HOH HOH A . G 6 HOH 132 1091 1091 HOH HOH A . G 6 HOH 133 1092 1092 HOH HOH A . G 6 HOH 134 1093 1093 HOH HOH A . G 6 HOH 135 1095 1095 HOH HOH A . G 6 HOH 136 1096 1096 HOH HOH A . G 6 HOH 137 1097 1097 HOH HOH A . G 6 HOH 138 1098 1098 HOH HOH A . G 6 HOH 139 1099 1099 HOH HOH A . G 6 HOH 140 1100 1100 HOH HOH A . G 6 HOH 141 1101 1101 HOH HOH A . G 6 HOH 142 1102 1102 HOH HOH A . G 6 HOH 143 1103 1103 HOH HOH A . G 6 HOH 144 1104 1104 HOH HOH A . G 6 HOH 145 1107 1107 HOH HOH A . G 6 HOH 146 1108 1108 HOH HOH A . G 6 HOH 147 1109 1109 HOH HOH A . G 6 HOH 148 1110 1110 HOH HOH A . G 6 HOH 149 1111 1111 HOH HOH A . G 6 HOH 150 1112 1112 HOH HOH A . G 6 HOH 151 1113 1113 HOH HOH A . G 6 HOH 152 1114 1114 HOH HOH A . G 6 HOH 153 1115 1115 HOH HOH A . G 6 HOH 154 1116 1116 HOH HOH A . G 6 HOH 155 1117 1117 HOH HOH A . G 6 HOH 156 1118 1118 HOH HOH A . H 6 HOH 1 927 927 HOH HOH P . H 6 HOH 2 931 931 HOH HOH P . H 6 HOH 3 972 972 HOH HOH P . I 6 HOH 1 900 900 HOH HOH T . I 6 HOH 2 908 908 HOH HOH T . I 6 HOH 3 937 937 HOH HOH T . I 6 HOH 4 938 938 HOH HOH T . I 6 HOH 5 942 942 HOH HOH T . I 6 HOH 6 944 944 HOH HOH T . I 6 HOH 7 985 985 HOH HOH T . I 6 HOH 8 992 992 HOH HOH T . I 6 HOH 9 1074 1074 HOH HOH T . I 6 HOH 10 1080 1080 HOH HOH T . I 6 HOH 11 1105 1105 HOH HOH T . I 6 HOH 12 1106 1106 HOH HOH T . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id DOC _pdbx_struct_mod_residue.label_seq_id 7 _pdbx_struct_mod_residue.auth_asym_id P _pdbx_struct_mod_residue.auth_comp_id DOC _pdbx_struct_mod_residue.auth_seq_id 873 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id DC _pdbx_struct_mod_residue.details "2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE" # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3460 ? 1 MORE -17 ? 1 'SSA (A^2)' 20490 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 34 ? A ASP 34 ? 1_555 MG ? E MG . ? A MG 871 ? 1_555 O ? A LEU 35 ? A LEU 35 ? 1_555 83.5 ? 2 OD2 ? A ASP 34 ? A ASP 34 ? 1_555 MG ? E MG . ? A MG 871 ? 1_555 OD1 ? A ASP 126 ? A ASP 126 ? 1_555 102.4 ? 3 O ? A LEU 35 ? A LEU 35 ? 1_555 MG ? E MG . ? A MG 871 ? 1_555 OD1 ? A ASP 126 ? A ASP 126 ? 1_555 82.8 ? 4 OD2 ? A ASP 34 ? A ASP 34 ? 1_555 MG ? E MG . ? A MG 871 ? 1_555 O2B ? D ATP . ? A ATP 875 ? 1_555 166.2 ? 5 O ? A LEU 35 ? A LEU 35 ? 1_555 MG ? E MG . ? A MG 871 ? 1_555 O2B ? D ATP . ? A ATP 875 ? 1_555 86.6 ? 6 OD1 ? A ASP 126 ? A ASP 126 ? 1_555 MG ? E MG . ? A MG 871 ? 1_555 O2B ? D ATP . ? A ATP 875 ? 1_555 85.7 ? 7 OD2 ? A ASP 34 ? A ASP 34 ? 1_555 MG ? E MG . ? A MG 871 ? 1_555 O1A ? D ATP . ? A ATP 875 ? 1_555 106.7 ? 8 O ? A LEU 35 ? A LEU 35 ? 1_555 MG ? E MG . ? A MG 871 ? 1_555 O1A ? D ATP . ? A ATP 875 ? 1_555 166.9 ? 9 OD1 ? A ASP 126 ? A ASP 126 ? 1_555 MG ? E MG . ? A MG 871 ? 1_555 O1A ? D ATP . ? A ATP 875 ? 1_555 102.4 ? 10 O2B ? D ATP . ? A ATP 875 ? 1_555 MG ? E MG . ? A MG 871 ? 1_555 O1A ? D ATP . ? A ATP 875 ? 1_555 81.9 ? 11 OE2 ? A GLU 127 ? A GLU 127 ? 1_555 MG ? F MG . ? A MG 872 ? 1_555 O1A ? D ATP . ? A ATP 875 ? 1_555 126.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-05-12 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Refinement description' 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Data collection' 9 5 'Structure model' 'Database references' 10 5 'Structure model' 'Derived calculations' 11 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' software 3 4 'Structure model' struct_conn 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' database_2 7 5 'Structure model' pdbx_initial_refinement_model 8 5 'Structure model' struct_conn 9 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_software.classification' 3 4 'Structure model' '_software.name' 4 4 'Structure model' '_software.version' 5 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 5 'Structure model' '_database_2.pdbx_DOI' 7 5 'Structure model' '_database_2.pdbx_database_accession' 8 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 9 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 10 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 11 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 12 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 13 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 14 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 15 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 16 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 17 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 18 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 19 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 20 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 16.1179 16.8542 5.9435 0.1117 0.0814 0.0089 0.0230 -0.0241 0.0015 0.5048 0.7430 1.8319 0.1145 0.1630 0.3505 0.0695 -0.0785 0.0090 0.0295 -0.0100 -0.0253 -0.0354 0.1142 0.1706 'X-RAY DIFFRACTION' 2 ? refined -4.6948 16.1653 23.6626 0.1562 0.1538 0.2719 -0.1497 0.1079 -0.1126 7.0805 6.3971 6.2166 -0.8933 -1.3976 1.6943 0.0737 -0.3941 0.3204 0.1067 -0.5515 1.2239 0.4637 0.6340 -0.5372 'X-RAY DIFFRACTION' 3 ? refined 0.4260 35.1639 -3.6848 0.2019 0.0525 0.2623 0.0478 -0.1937 -0.0618 6.4010 1.6100 3.4850 -0.8752 3.4141 -0.1161 -0.7038 -0.0732 0.7770 -0.1672 1.1886 -0.0693 -0.0125 -0.4130 -0.2655 'X-RAY DIFFRACTION' 4 ? refined 7.2953 41.1384 32.9277 0.5568 0.2143 0.5148 -0.2285 0.4349 -0.2998 4.6741 9.7371 4.5224 3.6445 -2.3275 0.3063 1.3028 -0.7168 -0.5860 -0.7647 1.3654 1.3781 1.6930 -0.4924 0.4353 'X-RAY DIFFRACTION' 5 ? refined 5.5052 37.4165 16.9507 0.1344 0.0853 0.3730 -0.0510 0.0035 0.0039 4.2818 2.8596 1.1952 0.3575 -0.7139 0.3773 0.1330 -0.0818 -0.0512 0.0564 1.0192 0.6560 -0.0792 -0.0612 0.2103 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 25 A 37 ? . . . . ? 'X-RAY DIFFRACTION' 2 1 A 99 A 224 ? . . . . ? 'X-RAY DIFFRACTION' 3 2 A 38 A 98 ? . . . . ? 'X-RAY DIFFRACTION' 4 3 A 225 A 287 ? . . . . ? 'X-RAY DIFFRACTION' 5 4 A 298 A 414 ? . . . . ? 'X-RAY DIFFRACTION' 6 5 P 867 P 873 ? . . . . ? 'X-RAY DIFFRACTION' 7 5 T 840 T 847 ? . . . . ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 AMoRE phasing . ? 2 CNS refinement 1.1 ? 3 JDirector 'data collection' . ? 4 HKL-2000 'data reduction' . ? 5 HKL-2000 'data scaling' . ? 6 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 "O5'" _pdbx_validate_symm_contact.auth_asym_id_1 P _pdbx_validate_symm_contact.auth_comp_id_1 DA _pdbx_validate_symm_contact.auth_seq_id_1 867 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 "O3'" _pdbx_validate_symm_contact.auth_asym_id_2 T _pdbx_validate_symm_contact.auth_comp_id_2 DT _pdbx_validate_symm_contact.auth_seq_id_2 847 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 10_665 _pdbx_validate_symm_contact.dist 1.84 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CD A ARG 122 ? ? NE A ARG 122 ? ? 1.349 1.460 -0.111 0.017 N 2 1 CE A LYS 207 ? ? NZ A LYS 207 ? ? 1.325 1.486 -0.161 0.025 N 3 1 CB A VAL 212 ? ? CG1 A VAL 212 ? ? 1.667 1.524 0.143 0.021 N 4 1 "O3'" P DC 872 ? ? "C3'" P DC 872 ? ? 1.383 1.419 -0.036 0.006 N 5 1 "O3'" P DC 872 ? ? P P DOC 873 ? ? 1.453 1.607 -0.154 0.012 Y 6 1 "C1'" T DT 839 ? ? N1 T DT 839 ? ? 1.575 1.488 0.087 0.013 N 7 1 "O3'" T 3DR 840 ? ? P T DG 841 ? ? 1.734 1.607 0.127 0.012 Y 8 1 "O3'" T DG 842 ? ? "C3'" T DG 842 ? ? 1.346 1.419 -0.073 0.006 N 9 1 "O3'" T DT 844 ? ? "C3'" T DT 844 ? ? 1.372 1.419 -0.047 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CG A ARG 122 ? ? CD A ARG 122 ? ? NE A ARG 122 ? ? 96.99 111.80 -14.81 2.10 N 2 1 CD A ARG 122 ? ? NE A ARG 122 ? ? CZ A ARG 122 ? ? 137.32 123.60 13.72 1.40 N 3 1 NE A ARG 122 ? ? CZ A ARG 122 ? ? NH1 A ARG 122 ? ? 127.95 120.30 7.65 0.50 N 4 1 NE A ARG 122 ? ? CZ A ARG 122 ? ? NH2 A ARG 122 ? ? 106.66 120.30 -13.64 0.50 N 5 1 CB A ASP 126 ? ? CG A ASP 126 ? ? OD1 A ASP 126 ? ? 109.15 118.30 -9.15 0.90 N 6 1 NE A ARG 184 ? ? CZ A ARG 184 ? ? NH1 A ARG 184 ? ? 127.17 120.30 6.87 0.50 N 7 1 NE A ARG 184 ? ? CZ A ARG 184 ? ? NH2 A ARG 184 ? ? 112.48 120.30 -7.82 0.50 N 8 1 NE A ARG 331 ? ? CZ A ARG 331 ? ? NH1 A ARG 331 ? ? 123.33 120.30 3.03 0.50 N 9 1 "O4'" P DA 867 ? ? "C4'" P DA 867 ? ? "C3'" P DA 867 ? ? 99.02 104.50 -5.48 0.40 N 10 1 "O4'" P DA 867 ? ? "C1'" P DA 867 ? ? N9 P DA 867 ? ? 117.65 108.30 9.35 0.30 N 11 1 "O4'" P DG 868 ? ? "C1'" P DG 868 ? ? N9 P DG 868 ? ? 110.76 108.30 2.46 0.30 N 12 1 N1 P DG 868 ? ? C6 P DG 868 ? ? O6 P DG 868 ? ? 124.60 119.90 4.70 0.60 N 13 1 "O4'" P DG 869 ? ? "C1'" P DG 869 ? ? N9 P DG 869 ? ? 115.80 108.30 7.50 0.30 N 14 1 C8 P DG 869 ? ? N9 P DG 869 ? ? C4 P DG 869 ? ? 103.57 106.40 -2.83 0.40 N 15 1 N9 P DG 869 ? ? C4 P DG 869 ? ? C5 P DG 869 ? ? 108.39 105.40 2.99 0.40 N 16 1 "C3'" P DG 869 ? ? "O3'" P DG 869 ? ? P P DA 870 ? ? 112.32 119.70 -7.38 1.20 Y 17 1 "O5'" P DA 870 ? ? P P DA 870 ? ? OP2 P DA 870 ? ? 95.30 105.70 -10.40 0.90 N 18 1 "O4'" P DA 870 ? ? "C4'" P DA 870 ? ? "C3'" P DA 870 ? ? 111.24 106.00 5.24 0.60 N 19 1 "O4'" P DA 870 ? ? "C1'" P DA 870 ? ? N9 P DA 870 ? ? 118.94 108.30 10.64 0.30 N 20 1 "O5'" P DC 871 ? ? P P DC 871 ? ? OP2 P DC 871 ? ? 96.21 105.70 -9.49 0.90 N 21 1 "O4'" P DC 871 ? ? "C4'" P DC 871 ? ? "C3'" P DC 871 ? ? 101.97 104.50 -2.53 0.40 N 22 1 "C4'" P DC 871 ? ? "C3'" P DC 871 ? ? "C2'" P DC 871 ? ? 97.71 102.20 -4.49 0.70 N 23 1 "O4'" P DC 872 ? ? "C4'" P DC 872 ? ? "C3'" P DC 872 ? ? 101.77 104.50 -2.73 0.40 N 24 1 "O4'" P DC 872 ? ? "C1'" P DC 872 ? ? N1 P DC 872 ? ? 110.45 108.30 2.15 0.30 N 25 1 C6 P DC 872 ? ? N1 P DC 872 ? ? C2 P DC 872 ? ? 122.80 120.30 2.50 0.40 N 26 1 "O4'" T DT 839 ? ? "C1'" T DT 839 ? ? N1 T DT 839 ? ? 114.00 108.30 5.70 0.30 N 27 1 "C3'" T 3DR 840 ? ? "O3'" T 3DR 840 ? ? P T DG 841 ? ? 139.36 119.70 19.66 1.20 Y 28 1 "O3'" T 3DR 840 ? ? P T DG 841 ? ? OP2 T DG 841 ? ? 89.16 105.20 -16.04 2.20 Y 29 1 "O3'" T 3DR 840 ? ? P T DG 841 ? ? OP1 T DG 841 ? ? 123.07 110.50 12.57 1.10 Y 30 1 "O4'" T DG 841 ? ? "C1'" T DG 841 ? ? N9 T DG 841 ? ? 114.46 108.30 6.16 0.30 N 31 1 C6 T DG 841 ? ? N1 T DG 841 ? ? C2 T DG 841 ? ? 121.34 125.10 -3.76 0.60 N 32 1 C2 T DG 841 ? ? N3 T DG 841 ? ? C4 T DG 841 ? ? 117.63 111.90 5.73 0.50 N 33 1 C5 T DG 841 ? ? C6 T DG 841 ? ? N1 T DG 841 ? ? 116.98 111.50 5.48 0.50 N 34 1 C5 T DG 841 ? ? C6 T DG 841 ? ? O6 T DG 841 ? ? 123.53 128.60 -5.07 0.60 N 35 1 "O4'" T DG 842 ? ? "C1'" T DG 842 ? ? "C2'" T DG 842 ? ? 112.37 106.80 5.57 0.50 N 36 1 "O4'" T DG 842 ? ? "C1'" T DG 842 ? ? N9 T DG 842 ? ? 103.13 108.00 -4.87 0.70 N 37 1 N1 T DG 842 ? ? C2 T DG 842 ? ? N2 T DG 842 ? ? 110.62 116.20 -5.58 0.90 N 38 1 N1 T DG 842 ? ? C6 T DG 842 ? ? O6 T DG 842 ? ? 115.61 119.90 -4.29 0.60 N 39 1 "O5'" T DG 843 ? ? P T DG 843 ? ? OP2 T DG 843 ? ? 100.07 105.70 -5.63 0.90 N 40 1 "O4'" T DG 843 ? ? "C4'" T DG 843 ? ? "C3'" T DG 843 ? ? 101.93 104.50 -2.57 0.40 N 41 1 "O5'" T DC 845 ? ? "C5'" T DC 845 ? ? "C4'" T DC 845 ? ? 104.51 109.40 -4.89 0.80 N 42 1 P T DC 845 ? ? "O5'" T DC 845 ? ? "C5'" T DC 845 ? ? 135.10 120.90 14.20 1.60 N 43 1 "O4'" T DC 845 ? ? "C1'" T DC 845 ? ? N1 T DC 845 ? ? 111.11 108.30 2.81 0.30 N 44 1 "C3'" T DC 845 ? ? "O3'" T DC 845 ? ? P T DC 846 ? ? 129.89 119.70 10.19 1.20 Y 45 1 N1 T DC 846 ? ? C2 T DC 846 ? ? O2 T DC 846 ? ? 123.31 118.90 4.41 0.60 N 46 1 C4 T DT 847 ? ? C5 T DT 847 ? ? C7 T DT 847 ? ? 122.98 119.00 3.98 0.60 N 47 1 C6 T DT 847 ? ? C5 T DT 847 ? ? C7 T DT 847 ? ? 118.80 122.90 -4.10 0.60 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 26 ? ? -85.42 -86.93 2 1 CYS A 37 ? ? 28.57 60.82 3 1 LYS A 60 ? ? 55.92 -125.28 4 1 SER A 145 ? ? -69.88 49.48 5 1 ASP A 146 ? ? -146.60 -60.80 6 1 GLU A 272 ? ? -145.98 -38.42 7 1 ASP A 289 ? ? -167.47 102.58 8 1 PHE A 308 ? ? -172.21 148.17 9 1 LYS A 310 ? ? 166.56 72.81 10 1 SER A 313 ? ? -46.40 -10.43 11 1 GLU A 314 ? ? 75.98 34.08 12 1 VAL A 315 ? ? -153.98 -117.85 13 1 GLU A 316 ? ? -45.22 -14.91 14 1 CYS A 333 ? ? -48.01 -89.69 15 1 GLN A 334 ? ? -13.58 -30.90 16 1 TYR A 349 ? ? -75.01 -158.74 17 1 SER A 350 ? ? 43.67 -139.18 18 1 HIS A 354 ? ? -32.30 -26.20 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 146 ? CG ? A ASP 146 CG 2 1 Y 1 A ASP 146 ? OD1 ? A ASP 146 OD1 3 1 Y 1 A ASP 146 ? OD2 ? A ASP 146 OD2 4 1 Y 1 A LYS 245 ? CG ? A LYS 245 CG 5 1 Y 1 A LYS 245 ? CD ? A LYS 245 CD 6 1 Y 1 A LYS 245 ? CE ? A LYS 245 CE 7 1 Y 1 A LYS 245 ? NZ ? A LYS 245 NZ 8 1 Y 1 A LYS 271 ? CG ? A LYS 271 CG 9 1 Y 1 A LYS 271 ? CD ? A LYS 271 CD 10 1 Y 1 A LYS 271 ? CE ? A LYS 271 CE 11 1 Y 1 A LYS 271 ? NZ ? A LYS 271 NZ 12 1 Y 1 A VAL 315 ? CG1 ? A VAL 315 CG1 13 1 Y 1 A VAL 315 ? CG2 ? A VAL 315 CG2 14 1 Y 1 A GLU 316 ? CG ? A GLU 316 CG 15 1 Y 1 A GLU 316 ? CD ? A GLU 316 CD 16 1 Y 1 A GLU 316 ? OE1 ? A GLU 316 OE1 17 1 Y 1 A GLU 316 ? OE2 ? A GLU 316 OE2 18 1 Y 1 A LYS 338 ? CG ? A LYS 338 CG 19 1 Y 1 A LYS 338 ? CD ? A LYS 338 CD 20 1 Y 1 A LYS 338 ? CE ? A LYS 338 CE 21 1 Y 1 A LYS 338 ? NZ ? A LYS 338 NZ 22 1 Y 1 A TYR 349 ? CG ? A TYR 349 CG 23 1 Y 1 A TYR 349 ? CD1 ? A TYR 349 CD1 24 1 Y 1 A TYR 349 ? CD2 ? A TYR 349 CD2 25 1 Y 1 A TYR 349 ? CE1 ? A TYR 349 CE1 26 1 Y 1 A TYR 349 ? CE2 ? A TYR 349 CE2 27 1 Y 1 A TYR 349 ? CZ ? A TYR 349 CZ 28 1 Y 1 A TYR 349 ? OH ? A TYR 349 OH 29 1 Y 1 A SER 350 ? OG ? A SER 350 OG 30 1 Y 1 A SER 351 ? OG ? A SER 351 OG 31 1 Y 1 A GLU 352 ? CG ? A GLU 352 CG 32 1 Y 1 A GLU 352 ? CD ? A GLU 352 CD 33 1 Y 1 A GLU 352 ? OE1 ? A GLU 352 OE1 34 1 Y 1 A GLU 352 ? OE2 ? A GLU 352 OE2 35 1 Y 1 A LYS 353 ? CG ? A LYS 353 CG 36 1 Y 1 A LYS 353 ? CD ? A LYS 353 CD 37 1 Y 1 A LYS 353 ? CE ? A LYS 353 CE 38 1 Y 1 A LYS 353 ? NZ ? A LYS 353 NZ 39 1 Y 1 A HIS 354 ? CG ? A HIS 354 CG 40 1 Y 1 A HIS 354 ? ND1 ? A HIS 354 ND1 41 1 Y 1 A HIS 354 ? CD2 ? A HIS 354 CD2 42 1 Y 1 A HIS 354 ? CE1 ? A HIS 354 CE1 43 1 Y 1 A HIS 354 ? NE2 ? A HIS 354 NE2 44 1 Y 1 A TYR 355 ? CG ? A TYR 355 CG 45 1 Y 1 A TYR 355 ? CD1 ? A TYR 355 CD1 46 1 Y 1 A TYR 355 ? CD2 ? A TYR 355 CD2 47 1 Y 1 A TYR 355 ? CE1 ? A TYR 355 CE1 48 1 Y 1 A TYR 355 ? CE2 ? A TYR 355 CE2 49 1 Y 1 A TYR 355 ? CZ ? A TYR 355 CZ 50 1 Y 1 A TYR 355 ? OH ? A TYR 355 OH 51 1 Y 1 A HIS 367 ? CG ? A HIS 367 CG 52 1 Y 1 A HIS 367 ? ND1 ? A HIS 367 ND1 53 1 Y 1 A HIS 367 ? CD2 ? A HIS 367 CD2 54 1 Y 1 A HIS 367 ? CE1 ? A HIS 367 CE1 55 1 Y 1 A HIS 367 ? NE2 ? A HIS 367 NE2 56 1 Y 1 A VAL 379 ? CG1 ? A VAL 379 CG1 57 1 Y 1 A VAL 379 ? CG2 ? A VAL 379 CG2 58 1 Y 1 A ILE 386 ? CG1 ? A ILE 386 CG1 59 1 Y 1 A ILE 386 ? CG2 ? A ILE 386 CG2 60 1 Y 1 A ILE 386 ? CD1 ? A ILE 386 CD1 61 1 Y 1 A LYS 389 ? CG ? A LYS 389 CG 62 1 Y 1 A LYS 389 ? CD ? A LYS 389 CD 63 1 Y 1 A LYS 389 ? CE ? A LYS 389 CE 64 1 Y 1 A LYS 389 ? NZ ? A LYS 389 NZ 65 1 Y 1 A LEU 405 ? CG ? A LEU 405 CG 66 1 Y 1 A LEU 405 ? CD1 ? A LEU 405 CD1 67 1 Y 1 A LEU 405 ? CD2 ? A LEU 405 CD2 68 1 Y 1 T DT 839 ? P ? C DT 3 P 69 1 Y 1 T DT 839 ? OP1 ? C DT 3 OP1 70 1 Y 1 T DT 839 ? OP2 ? C DT 3 OP2 71 1 N 1 A ATP 875 ? "O2'" ? D ATP 1 "O2'" # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A GLU 2 ? A GLU 2 3 1 Y 1 A LEU 3 ? A LEU 3 4 1 Y 1 A ALA 4 ? A ALA 4 5 1 Y 1 A ASP 5 ? A ASP 5 6 1 Y 1 A VAL 6 ? A VAL 6 7 1 Y 1 A GLY 7 ? A GLY 7 8 1 Y 1 A ALA 8 ? A ALA 8 9 1 Y 1 A ALA 9 ? A ALA 9 10 1 Y 1 A ALA 10 ? A ALA 10 11 1 Y 1 A SER 11 ? A SER 11 12 1 Y 1 A SER 12 ? A SER 12 13 1 Y 1 A GLN 13 ? A GLN 13 14 1 Y 1 A GLY 14 ? A GLY 14 15 1 Y 1 A VAL 15 ? A VAL 15 16 1 Y 1 A HIS 16 ? A HIS 16 17 1 Y 1 A ASP 17 ? A ASP 17 18 1 Y 1 A GLN 18 ? A GLN 18 19 1 Y 1 A VAL 19 ? A VAL 19 20 1 Y 1 A LEU 20 ? A LEU 20 21 1 Y 1 A PRO 21 ? A PRO 21 22 1 Y 1 A THR 22 ? A THR 22 23 1 Y 1 A PRO 23 ? A PRO 23 24 1 Y 1 A ASN 24 ? A ASN 24 25 1 Y 1 A LYS 371 ? A LYS 371 26 1 Y 1 A LEU 372 ? A LEU 372 27 1 Y 1 A GLY 373 ? A GLY 373 28 1 Y 1 A THR 374 ? A THR 374 29 1 Y 1 A GLY 375 ? A GLY 375 30 1 Y 1 A ASN 376 ? A ASN 376 31 1 Y 1 A TYR 377 ? A TYR 377 32 1 Y 1 A ASP 378 ? A ASP 378 33 1 Y 1 A VAL 395 ? A VAL 395 34 1 Y 1 A ASN 396 ? A ASN 396 35 1 Y 1 A VAL 397 ? A VAL 397 36 1 Y 1 A LYS 398 ? A LYS 398 37 1 Y 1 A MET 399 ? A MET 399 38 1 Y 1 A PRO 400 ? A PRO 400 39 1 Y 1 A PHE 401 ? A PHE 401 40 1 Y 1 A HIS 402 ? A HIS 402 41 1 Y 1 A LEU 403 ? A LEU 403 42 1 Y 1 A ALA 415 ? A ALA 415 43 1 Y 1 A LEU 416 ? A LEU 416 44 1 Y 1 A ASN 417 ? A ASN 417 45 1 Y 1 A THR 418 ? A THR 418 46 1 Y 1 A ALA 419 ? A ALA 419 47 1 Y 1 A LYS 420 ? A LYS 420 48 1 Y 1 T DT 837 ? C DT 1 49 1 Y 1 T DC 838 ? C DC 2 50 1 Y 1 T DA 839 A C DA 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 3DR "O5'" O N N 1 3DR P P N N 2 3DR OP1 O N N 3 3DR OP2 O N N 4 3DR OP3 O N N 5 3DR "C2'" C N N 6 3DR "C5'" C N N 7 3DR "C4'" C N R 8 3DR "O4'" O N N 9 3DR "C1'" C N N 10 3DR "C3'" C N S 11 3DR "O3'" O N N 12 3DR HOP2 H N N 13 3DR HOP3 H N N 14 3DR "H2'" H N N 15 3DR "H2''" H N N 16 3DR "H5'" H N N 17 3DR "H5''" H N N 18 3DR "H4'1" H N N 19 3DR "H1'1" H N N 20 3DR "H1'2" H N N 21 3DR "H3'" H N N 22 3DR "HO3'" H N N 23 ALA N N N N 24 ALA CA C N S 25 ALA C C N N 26 ALA O O N N 27 ALA CB C N N 28 ALA OXT O N N 29 ALA H H N N 30 ALA H2 H N N 31 ALA HA H N N 32 ALA HB1 H N N 33 ALA HB2 H N N 34 ALA HB3 H N N 35 ALA HXT H N N 36 ARG N N N N 37 ARG CA C N S 38 ARG C C N N 39 ARG O O N N 40 ARG CB C N N 41 ARG CG C N N 42 ARG CD C N N 43 ARG NE N N N 44 ARG CZ C N N 45 ARG NH1 N N N 46 ARG NH2 N N N 47 ARG OXT O N N 48 ARG H H N N 49 ARG H2 H N N 50 ARG HA H N N 51 ARG HB2 H N N 52 ARG HB3 H N N 53 ARG HG2 H N N 54 ARG HG3 H N N 55 ARG HD2 H N N 56 ARG HD3 H N N 57 ARG HE H N N 58 ARG HH11 H N N 59 ARG HH12 H N N 60 ARG HH21 H N N 61 ARG HH22 H N N 62 ARG HXT H N N 63 ASN N N N N 64 ASN CA C N S 65 ASN C C N N 66 ASN O O N N 67 ASN CB C N N 68 ASN CG C N N 69 ASN OD1 O N N 70 ASN ND2 N N N 71 ASN OXT O N N 72 ASN H H N N 73 ASN H2 H N N 74 ASN HA H N N 75 ASN HB2 H N N 76 ASN HB3 H N N 77 ASN HD21 H N N 78 ASN HD22 H N N 79 ASN HXT H N N 80 ASP N N N N 81 ASP CA C N S 82 ASP C C N N 83 ASP O O N N 84 ASP CB C N N 85 ASP CG C N N 86 ASP OD1 O N N 87 ASP OD2 O N N 88 ASP OXT O N N 89 ASP H H N N 90 ASP H2 H N N 91 ASP HA H N N 92 ASP HB2 H N N 93 ASP HB3 H N N 94 ASP HD2 H N N 95 ASP HXT H N N 96 ATP PG P N N 97 ATP O1G O N N 98 ATP O2G O N N 99 ATP O3G O N N 100 ATP PB P N R 101 ATP O1B O N N 102 ATP O2B O N N 103 ATP O3B O N N 104 ATP PA P N R 105 ATP O1A O N N 106 ATP O2A O N N 107 ATP O3A O N N 108 ATP "O5'" O N N 109 ATP "C5'" C N N 110 ATP "C4'" C N R 111 ATP "O4'" O N N 112 ATP "C3'" C N S 113 ATP "O3'" O N N 114 ATP "C2'" C N R 115 ATP "O2'" O N N 116 ATP "C1'" C N R 117 ATP N9 N Y N 118 ATP C8 C Y N 119 ATP N7 N Y N 120 ATP C5 C Y N 121 ATP C6 C Y N 122 ATP N6 N N N 123 ATP N1 N Y N 124 ATP C2 C Y N 125 ATP N3 N Y N 126 ATP C4 C Y N 127 ATP HOG2 H N N 128 ATP HOG3 H N N 129 ATP HOB2 H N N 130 ATP HOA2 H N N 131 ATP "H5'1" H N N 132 ATP "H5'2" H N N 133 ATP "H4'" H N N 134 ATP "H3'" H N N 135 ATP "HO3'" H N N 136 ATP "H2'" H N N 137 ATP "HO2'" H N N 138 ATP "H1'" H N N 139 ATP H8 H N N 140 ATP HN61 H N N 141 ATP HN62 H N N 142 ATP H2 H N N 143 CYS N N N N 144 CYS CA C N R 145 CYS C C N N 146 CYS O O N N 147 CYS CB C N N 148 CYS SG S N N 149 CYS OXT O N N 150 CYS H H N N 151 CYS H2 H N N 152 CYS HA H N N 153 CYS HB2 H N N 154 CYS HB3 H N N 155 CYS HG H N N 156 CYS HXT H N N 157 DA OP3 O N N 158 DA P P N N 159 DA OP1 O N N 160 DA OP2 O N N 161 DA "O5'" O N N 162 DA "C5'" C N N 163 DA "C4'" C N R 164 DA "O4'" O N N 165 DA "C3'" C N S 166 DA "O3'" O N N 167 DA "C2'" C N N 168 DA "C1'" C N R 169 DA N9 N Y N 170 DA C8 C Y N 171 DA N7 N Y N 172 DA C5 C Y N 173 DA C6 C Y N 174 DA N6 N N N 175 DA N1 N Y N 176 DA C2 C Y N 177 DA N3 N Y N 178 DA C4 C Y N 179 DA HOP3 H N N 180 DA HOP2 H N N 181 DA "H5'" H N N 182 DA "H5''" H N N 183 DA "H4'" H N N 184 DA "H3'" H N N 185 DA "HO3'" H N N 186 DA "H2'" H N N 187 DA "H2''" H N N 188 DA "H1'" H N N 189 DA H8 H N N 190 DA H61 H N N 191 DA H62 H N N 192 DA H2 H N N 193 DC OP3 O N N 194 DC P P N N 195 DC OP1 O N N 196 DC OP2 O N N 197 DC "O5'" O N N 198 DC "C5'" C N N 199 DC "C4'" C N R 200 DC "O4'" O N N 201 DC "C3'" C N S 202 DC "O3'" O N N 203 DC "C2'" C N N 204 DC "C1'" C N R 205 DC N1 N N N 206 DC C2 C N N 207 DC O2 O N N 208 DC N3 N N N 209 DC C4 C N N 210 DC N4 N N N 211 DC C5 C N N 212 DC C6 C N N 213 DC HOP3 H N N 214 DC HOP2 H N N 215 DC "H5'" H N N 216 DC "H5''" H N N 217 DC "H4'" H N N 218 DC "H3'" H N N 219 DC "HO3'" H N N 220 DC "H2'" H N N 221 DC "H2''" H N N 222 DC "H1'" H N N 223 DC H41 H N N 224 DC H42 H N N 225 DC H5 H N N 226 DC H6 H N N 227 DG OP3 O N N 228 DG P P N N 229 DG OP1 O N N 230 DG OP2 O N N 231 DG "O5'" O N N 232 DG "C5'" C N N 233 DG "C4'" C N R 234 DG "O4'" O N N 235 DG "C3'" C N S 236 DG "O3'" O N N 237 DG "C2'" C N N 238 DG "C1'" C N R 239 DG N9 N Y N 240 DG C8 C Y N 241 DG N7 N Y N 242 DG C5 C Y N 243 DG C6 C N N 244 DG O6 O N N 245 DG N1 N N N 246 DG C2 C N N 247 DG N2 N N N 248 DG N3 N N N 249 DG C4 C Y N 250 DG HOP3 H N N 251 DG HOP2 H N N 252 DG "H5'" H N N 253 DG "H5''" H N N 254 DG "H4'" H N N 255 DG "H3'" H N N 256 DG "HO3'" H N N 257 DG "H2'" H N N 258 DG "H2''" H N N 259 DG "H1'" H N N 260 DG H8 H N N 261 DG H1 H N N 262 DG H21 H N N 263 DG H22 H N N 264 DOC N1 N N N 265 DOC C2 C N N 266 DOC N3 N N N 267 DOC C4 C N N 268 DOC C5 C N N 269 DOC C6 C N N 270 DOC O2 O N N 271 DOC N4 N N N 272 DOC "C1'" C N R 273 DOC "C2'" C N N 274 DOC "C3'" C N N 275 DOC "C4'" C N S 276 DOC "O4'" O N N 277 DOC "C5'" C N N 278 DOC "O5'" O N N 279 DOC P P N N 280 DOC OP1 O N N 281 DOC OP2 O N N 282 DOC OP3 O N N 283 DOC H5 H N N 284 DOC H6 H N N 285 DOC HN41 H N N 286 DOC HN42 H N N 287 DOC "H1'" H N N 288 DOC "H2'" H N N 289 DOC "H2''" H N N 290 DOC "H3'1" H N N 291 DOC "H3'2" H N N 292 DOC "H4'" H N N 293 DOC "H5'" H N N 294 DOC "H5''" H N N 295 DOC HOP2 H N N 296 DOC HOP3 H N N 297 DT OP3 O N N 298 DT P P N N 299 DT OP1 O N N 300 DT OP2 O N N 301 DT "O5'" O N N 302 DT "C5'" C N N 303 DT "C4'" C N R 304 DT "O4'" O N N 305 DT "C3'" C N S 306 DT "O3'" O N N 307 DT "C2'" C N N 308 DT "C1'" C N R 309 DT N1 N N N 310 DT C2 C N N 311 DT O2 O N N 312 DT N3 N N N 313 DT C4 C N N 314 DT O4 O N N 315 DT C5 C N N 316 DT C7 C N N 317 DT C6 C N N 318 DT HOP3 H N N 319 DT HOP2 H N N 320 DT "H5'" H N N 321 DT "H5''" H N N 322 DT "H4'" H N N 323 DT "H3'" H N N 324 DT "HO3'" H N N 325 DT "H2'" H N N 326 DT "H2''" H N N 327 DT "H1'" H N N 328 DT H3 H N N 329 DT H71 H N N 330 DT H72 H N N 331 DT H73 H N N 332 DT H6 H N N 333 GLN N N N N 334 GLN CA C N S 335 GLN C C N N 336 GLN O O N N 337 GLN CB C N N 338 GLN CG C N N 339 GLN CD C N N 340 GLN OE1 O N N 341 GLN NE2 N N N 342 GLN OXT O N N 343 GLN H H N N 344 GLN H2 H N N 345 GLN HA H N N 346 GLN HB2 H N N 347 GLN HB3 H N N 348 GLN HG2 H N N 349 GLN HG3 H N N 350 GLN HE21 H N N 351 GLN HE22 H N N 352 GLN HXT H N N 353 GLU N N N N 354 GLU CA C N S 355 GLU C C N N 356 GLU O O N N 357 GLU CB C N N 358 GLU CG C N N 359 GLU CD C N N 360 GLU OE1 O N N 361 GLU OE2 O N N 362 GLU OXT O N N 363 GLU H H N N 364 GLU H2 H N N 365 GLU HA H N N 366 GLU HB2 H N N 367 GLU HB3 H N N 368 GLU HG2 H N N 369 GLU HG3 H N N 370 GLU HE2 H N N 371 GLU HXT H N N 372 GLY N N N N 373 GLY CA C N N 374 GLY C C N N 375 GLY O O N N 376 GLY OXT O N N 377 GLY H H N N 378 GLY H2 H N N 379 GLY HA2 H N N 380 GLY HA3 H N N 381 GLY HXT H N N 382 HIS N N N N 383 HIS CA C N S 384 HIS C C N N 385 HIS O O N N 386 HIS CB C N N 387 HIS CG C Y N 388 HIS ND1 N Y N 389 HIS CD2 C Y N 390 HIS CE1 C Y N 391 HIS NE2 N Y N 392 HIS OXT O N N 393 HIS H H N N 394 HIS H2 H N N 395 HIS HA H N N 396 HIS HB2 H N N 397 HIS HB3 H N N 398 HIS HD1 H N N 399 HIS HD2 H N N 400 HIS HE1 H N N 401 HIS HE2 H N N 402 HIS HXT H N N 403 HOH O O N N 404 HOH H1 H N N 405 HOH H2 H N N 406 ILE N N N N 407 ILE CA C N S 408 ILE C C N N 409 ILE O O N N 410 ILE CB C N S 411 ILE CG1 C N N 412 ILE CG2 C N N 413 ILE CD1 C N N 414 ILE OXT O N N 415 ILE H H N N 416 ILE H2 H N N 417 ILE HA H N N 418 ILE HB H N N 419 ILE HG12 H N N 420 ILE HG13 H N N 421 ILE HG21 H N N 422 ILE HG22 H N N 423 ILE HG23 H N N 424 ILE HD11 H N N 425 ILE HD12 H N N 426 ILE HD13 H N N 427 ILE HXT H N N 428 LEU N N N N 429 LEU CA C N S 430 LEU C C N N 431 LEU O O N N 432 LEU CB C N N 433 LEU CG C N N 434 LEU CD1 C N N 435 LEU CD2 C N N 436 LEU OXT O N N 437 LEU H H N N 438 LEU H2 H N N 439 LEU HA H N N 440 LEU HB2 H N N 441 LEU HB3 H N N 442 LEU HG H N N 443 LEU HD11 H N N 444 LEU HD12 H N N 445 LEU HD13 H N N 446 LEU HD21 H N N 447 LEU HD22 H N N 448 LEU HD23 H N N 449 LEU HXT H N N 450 LYS N N N N 451 LYS CA C N S 452 LYS C C N N 453 LYS O O N N 454 LYS CB C N N 455 LYS CG C N N 456 LYS CD C N N 457 LYS CE C N N 458 LYS NZ N N N 459 LYS OXT O N N 460 LYS H H N N 461 LYS H2 H N N 462 LYS HA H N N 463 LYS HB2 H N N 464 LYS HB3 H N N 465 LYS HG2 H N N 466 LYS HG3 H N N 467 LYS HD2 H N N 468 LYS HD3 H N N 469 LYS HE2 H N N 470 LYS HE3 H N N 471 LYS HZ1 H N N 472 LYS HZ2 H N N 473 LYS HZ3 H N N 474 LYS HXT H N N 475 MET N N N N 476 MET CA C N S 477 MET C C N N 478 MET O O N N 479 MET CB C N N 480 MET CG C N N 481 MET SD S N N 482 MET CE C N N 483 MET OXT O N N 484 MET H H N N 485 MET H2 H N N 486 MET HA H N N 487 MET HB2 H N N 488 MET HB3 H N N 489 MET HG2 H N N 490 MET HG3 H N N 491 MET HE1 H N N 492 MET HE2 H N N 493 MET HE3 H N N 494 MET HXT H N N 495 MG MG MG N N 496 PHE N N N N 497 PHE CA C N S 498 PHE C C N N 499 PHE O O N N 500 PHE CB C N N 501 PHE CG C Y N 502 PHE CD1 C Y N 503 PHE CD2 C Y N 504 PHE CE1 C Y N 505 PHE CE2 C Y N 506 PHE CZ C Y N 507 PHE OXT O N N 508 PHE H H N N 509 PHE H2 H N N 510 PHE HA H N N 511 PHE HB2 H N N 512 PHE HB3 H N N 513 PHE HD1 H N N 514 PHE HD2 H N N 515 PHE HE1 H N N 516 PHE HE2 H N N 517 PHE HZ H N N 518 PHE HXT H N N 519 PRO N N N N 520 PRO CA C N S 521 PRO C C N N 522 PRO O O N N 523 PRO CB C N N 524 PRO CG C N N 525 PRO CD C N N 526 PRO OXT O N N 527 PRO H H N N 528 PRO HA H N N 529 PRO HB2 H N N 530 PRO HB3 H N N 531 PRO HG2 H N N 532 PRO HG3 H N N 533 PRO HD2 H N N 534 PRO HD3 H N N 535 PRO HXT H N N 536 SER N N N N 537 SER CA C N S 538 SER C C N N 539 SER O O N N 540 SER CB C N N 541 SER OG O N N 542 SER OXT O N N 543 SER H H N N 544 SER H2 H N N 545 SER HA H N N 546 SER HB2 H N N 547 SER HB3 H N N 548 SER HG H N N 549 SER HXT H N N 550 THR N N N N 551 THR CA C N S 552 THR C C N N 553 THR O O N N 554 THR CB C N R 555 THR OG1 O N N 556 THR CG2 C N N 557 THR OXT O N N 558 THR H H N N 559 THR H2 H N N 560 THR HA H N N 561 THR HB H N N 562 THR HG1 H N N 563 THR HG21 H N N 564 THR HG22 H N N 565 THR HG23 H N N 566 THR HXT H N N 567 TYR N N N N 568 TYR CA C N S 569 TYR C C N N 570 TYR O O N N 571 TYR CB C N N 572 TYR CG C Y N 573 TYR CD1 C Y N 574 TYR CD2 C Y N 575 TYR CE1 C Y N 576 TYR CE2 C Y N 577 TYR CZ C Y N 578 TYR OH O N N 579 TYR OXT O N N 580 TYR H H N N 581 TYR H2 H N N 582 TYR HA H N N 583 TYR HB2 H N N 584 TYR HB3 H N N 585 TYR HD1 H N N 586 TYR HD2 H N N 587 TYR HE1 H N N 588 TYR HE2 H N N 589 TYR HH H N N 590 TYR HXT H N N 591 VAL N N N N 592 VAL CA C N S 593 VAL C C N N 594 VAL O O N N 595 VAL CB C N N 596 VAL CG1 C N N 597 VAL CG2 C N N 598 VAL OXT O N N 599 VAL H H N N 600 VAL H2 H N N 601 VAL HA H N N 602 VAL HB H N N 603 VAL HG11 H N N 604 VAL HG12 H N N 605 VAL HG13 H N N 606 VAL HG21 H N N 607 VAL HG22 H N N 608 VAL HG23 H N N 609 VAL HXT H N N 610 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 3DR "O5'" P sing N N 1 3DR "O5'" "C5'" sing N N 2 3DR P OP1 doub N N 3 3DR P OP2 sing N N 4 3DR P OP3 sing N N 5 3DR OP2 HOP2 sing N N 6 3DR OP3 HOP3 sing N N 7 3DR "C2'" "C1'" sing N N 8 3DR "C2'" "C3'" sing N N 9 3DR "C2'" "H2'" sing N N 10 3DR "C2'" "H2''" sing N N 11 3DR "C5'" "C4'" sing N N 12 3DR "C5'" "H5'" sing N N 13 3DR "C5'" "H5''" sing N N 14 3DR "C4'" "O4'" sing N N 15 3DR "C4'" "C3'" sing N N 16 3DR "C4'" "H4'1" sing N N 17 3DR "O4'" "C1'" sing N N 18 3DR "C1'" "H1'1" sing N N 19 3DR "C1'" "H1'2" sing N N 20 3DR "C3'" "O3'" sing N N 21 3DR "C3'" "H3'" sing N N 22 3DR "O3'" "HO3'" sing N N 23 ALA N CA sing N N 24 ALA N H sing N N 25 ALA N H2 sing N N 26 ALA CA C sing N N 27 ALA CA CB sing N N 28 ALA CA HA sing N N 29 ALA C O doub N N 30 ALA C OXT sing N N 31 ALA CB HB1 sing N N 32 ALA CB HB2 sing N N 33 ALA CB HB3 sing N N 34 ALA OXT HXT sing N N 35 ARG N CA sing N N 36 ARG N H sing N N 37 ARG N H2 sing N N 38 ARG CA C sing N N 39 ARG CA CB sing N N 40 ARG CA HA sing N N 41 ARG C O doub N N 42 ARG C OXT sing N N 43 ARG CB CG sing N N 44 ARG CB HB2 sing N N 45 ARG CB HB3 sing N N 46 ARG CG CD sing N N 47 ARG CG HG2 sing N N 48 ARG CG HG3 sing N N 49 ARG CD NE sing N N 50 ARG CD HD2 sing N N 51 ARG CD HD3 sing N N 52 ARG NE CZ sing N N 53 ARG NE HE sing N N 54 ARG CZ NH1 sing N N 55 ARG CZ NH2 doub N N 56 ARG NH1 HH11 sing N N 57 ARG NH1 HH12 sing N N 58 ARG NH2 HH21 sing N N 59 ARG NH2 HH22 sing N N 60 ARG OXT HXT sing N N 61 ASN N CA sing N N 62 ASN N H sing N N 63 ASN N H2 sing N N 64 ASN CA C sing N N 65 ASN CA CB sing N N 66 ASN CA HA sing N N 67 ASN C O doub N N 68 ASN C OXT sing N N 69 ASN CB CG sing N N 70 ASN CB HB2 sing N N 71 ASN CB HB3 sing N N 72 ASN CG OD1 doub N N 73 ASN CG ND2 sing N N 74 ASN ND2 HD21 sing N N 75 ASN ND2 HD22 sing N N 76 ASN OXT HXT sing N N 77 ASP N CA sing N N 78 ASP N H sing N N 79 ASP N H2 sing N N 80 ASP CA C sing N N 81 ASP CA CB sing N N 82 ASP CA HA sing N N 83 ASP C O doub N N 84 ASP C OXT sing N N 85 ASP CB CG sing N N 86 ASP CB HB2 sing N N 87 ASP CB HB3 sing N N 88 ASP CG OD1 doub N N 89 ASP CG OD2 sing N N 90 ASP OD2 HD2 sing N N 91 ASP OXT HXT sing N N 92 ATP PG O1G doub N N 93 ATP PG O2G sing N N 94 ATP PG O3G sing N N 95 ATP PG O3B sing N N 96 ATP O2G HOG2 sing N N 97 ATP O3G HOG3 sing N N 98 ATP PB O1B doub N N 99 ATP PB O2B sing N N 100 ATP PB O3B sing N N 101 ATP PB O3A sing N N 102 ATP O2B HOB2 sing N N 103 ATP PA O1A doub N N 104 ATP PA O2A sing N N 105 ATP PA O3A sing N N 106 ATP PA "O5'" sing N N 107 ATP O2A HOA2 sing N N 108 ATP "O5'" "C5'" sing N N 109 ATP "C5'" "C4'" sing N N 110 ATP "C5'" "H5'1" sing N N 111 ATP "C5'" "H5'2" sing N N 112 ATP "C4'" "O4'" sing N N 113 ATP "C4'" "C3'" sing N N 114 ATP "C4'" "H4'" sing N N 115 ATP "O4'" "C1'" sing N N 116 ATP "C3'" "O3'" sing N N 117 ATP "C3'" "C2'" sing N N 118 ATP "C3'" "H3'" sing N N 119 ATP "O3'" "HO3'" sing N N 120 ATP "C2'" "O2'" sing N N 121 ATP "C2'" "C1'" sing N N 122 ATP "C2'" "H2'" sing N N 123 ATP "O2'" "HO2'" sing N N 124 ATP "C1'" N9 sing N N 125 ATP "C1'" "H1'" sing N N 126 ATP N9 C8 sing Y N 127 ATP N9 C4 sing Y N 128 ATP C8 N7 doub Y N 129 ATP C8 H8 sing N N 130 ATP N7 C5 sing Y N 131 ATP C5 C6 sing Y N 132 ATP C5 C4 doub Y N 133 ATP C6 N6 sing N N 134 ATP C6 N1 doub Y N 135 ATP N6 HN61 sing N N 136 ATP N6 HN62 sing N N 137 ATP N1 C2 sing Y N 138 ATP C2 N3 doub Y N 139 ATP C2 H2 sing N N 140 ATP N3 C4 sing Y N 141 CYS N CA sing N N 142 CYS N H sing N N 143 CYS N H2 sing N N 144 CYS CA C sing N N 145 CYS CA CB sing N N 146 CYS CA HA sing N N 147 CYS C O doub N N 148 CYS C OXT sing N N 149 CYS CB SG sing N N 150 CYS CB HB2 sing N N 151 CYS CB HB3 sing N N 152 CYS SG HG sing N N 153 CYS OXT HXT sing N N 154 DA OP3 P sing N N 155 DA OP3 HOP3 sing N N 156 DA P OP1 doub N N 157 DA P OP2 sing N N 158 DA P "O5'" sing N N 159 DA OP2 HOP2 sing N N 160 DA "O5'" "C5'" sing N N 161 DA "C5'" "C4'" sing N N 162 DA "C5'" "H5'" sing N N 163 DA "C5'" "H5''" sing N N 164 DA "C4'" "O4'" sing N N 165 DA "C4'" "C3'" sing N N 166 DA "C4'" "H4'" sing N N 167 DA "O4'" "C1'" sing N N 168 DA "C3'" "O3'" sing N N 169 DA "C3'" "C2'" sing N N 170 DA "C3'" "H3'" sing N N 171 DA "O3'" "HO3'" sing N N 172 DA "C2'" "C1'" sing N N 173 DA "C2'" "H2'" sing N N 174 DA "C2'" "H2''" sing N N 175 DA "C1'" N9 sing N N 176 DA "C1'" "H1'" sing N N 177 DA N9 C8 sing Y N 178 DA N9 C4 sing Y N 179 DA C8 N7 doub Y N 180 DA C8 H8 sing N N 181 DA N7 C5 sing Y N 182 DA C5 C6 sing Y N 183 DA C5 C4 doub Y N 184 DA C6 N6 sing N N 185 DA C6 N1 doub Y N 186 DA N6 H61 sing N N 187 DA N6 H62 sing N N 188 DA N1 C2 sing Y N 189 DA C2 N3 doub Y N 190 DA C2 H2 sing N N 191 DA N3 C4 sing Y N 192 DC OP3 P sing N N 193 DC OP3 HOP3 sing N N 194 DC P OP1 doub N N 195 DC P OP2 sing N N 196 DC P "O5'" sing N N 197 DC OP2 HOP2 sing N N 198 DC "O5'" "C5'" sing N N 199 DC "C5'" "C4'" sing N N 200 DC "C5'" "H5'" sing N N 201 DC "C5'" "H5''" sing N N 202 DC "C4'" "O4'" sing N N 203 DC "C4'" "C3'" sing N N 204 DC "C4'" "H4'" sing N N 205 DC "O4'" "C1'" sing N N 206 DC "C3'" "O3'" sing N N 207 DC "C3'" "C2'" sing N N 208 DC "C3'" "H3'" sing N N 209 DC "O3'" "HO3'" sing N N 210 DC "C2'" "C1'" sing N N 211 DC "C2'" "H2'" sing N N 212 DC "C2'" "H2''" sing N N 213 DC "C1'" N1 sing N N 214 DC "C1'" "H1'" sing N N 215 DC N1 C2 sing N N 216 DC N1 C6 sing N N 217 DC C2 O2 doub N N 218 DC C2 N3 sing N N 219 DC N3 C4 doub N N 220 DC C4 N4 sing N N 221 DC C4 C5 sing N N 222 DC N4 H41 sing N N 223 DC N4 H42 sing N N 224 DC C5 C6 doub N N 225 DC C5 H5 sing N N 226 DC C6 H6 sing N N 227 DG OP3 P sing N N 228 DG OP3 HOP3 sing N N 229 DG P OP1 doub N N 230 DG P OP2 sing N N 231 DG P "O5'" sing N N 232 DG OP2 HOP2 sing N N 233 DG "O5'" "C5'" sing N N 234 DG "C5'" "C4'" sing N N 235 DG "C5'" "H5'" sing N N 236 DG "C5'" "H5''" sing N N 237 DG "C4'" "O4'" sing N N 238 DG "C4'" "C3'" sing N N 239 DG "C4'" "H4'" sing N N 240 DG "O4'" "C1'" sing N N 241 DG "C3'" "O3'" sing N N 242 DG "C3'" "C2'" sing N N 243 DG "C3'" "H3'" sing N N 244 DG "O3'" "HO3'" sing N N 245 DG "C2'" "C1'" sing N N 246 DG "C2'" "H2'" sing N N 247 DG "C2'" "H2''" sing N N 248 DG "C1'" N9 sing N N 249 DG "C1'" "H1'" sing N N 250 DG N9 C8 sing Y N 251 DG N9 C4 sing Y N 252 DG C8 N7 doub Y N 253 DG C8 H8 sing N N 254 DG N7 C5 sing Y N 255 DG C5 C6 sing N N 256 DG C5 C4 doub Y N 257 DG C6 O6 doub N N 258 DG C6 N1 sing N N 259 DG N1 C2 sing N N 260 DG N1 H1 sing N N 261 DG C2 N2 sing N N 262 DG C2 N3 doub N N 263 DG N2 H21 sing N N 264 DG N2 H22 sing N N 265 DG N3 C4 sing N N 266 DOC N1 C2 sing N N 267 DOC N1 C6 sing N N 268 DOC N1 "C1'" sing N N 269 DOC C2 N3 sing N N 270 DOC C2 O2 doub N N 271 DOC N3 C4 doub N N 272 DOC C4 C5 sing N N 273 DOC C4 N4 sing N N 274 DOC C5 C6 doub N N 275 DOC C5 H5 sing N N 276 DOC C6 H6 sing N N 277 DOC N4 HN41 sing N N 278 DOC N4 HN42 sing N N 279 DOC "C1'" "C2'" sing N N 280 DOC "C1'" "O4'" sing N N 281 DOC "C1'" "H1'" sing N N 282 DOC "C2'" "C3'" sing N N 283 DOC "C2'" "H2'" sing N N 284 DOC "C2'" "H2''" sing N N 285 DOC "C3'" "C4'" sing N N 286 DOC "C3'" "H3'1" sing N N 287 DOC "C3'" "H3'2" sing N N 288 DOC "C4'" "O4'" sing N N 289 DOC "C4'" "C5'" sing N N 290 DOC "C4'" "H4'" sing N N 291 DOC "C5'" "O5'" sing N N 292 DOC "C5'" "H5'" sing N N 293 DOC "C5'" "H5''" sing N N 294 DOC "O5'" P sing N N 295 DOC P OP1 doub N N 296 DOC P OP2 sing N N 297 DOC P OP3 sing N N 298 DOC OP2 HOP2 sing N N 299 DOC OP3 HOP3 sing N N 300 DT OP3 P sing N N 301 DT OP3 HOP3 sing N N 302 DT P OP1 doub N N 303 DT P OP2 sing N N 304 DT P "O5'" sing N N 305 DT OP2 HOP2 sing N N 306 DT "O5'" "C5'" sing N N 307 DT "C5'" "C4'" sing N N 308 DT "C5'" "H5'" sing N N 309 DT "C5'" "H5''" sing N N 310 DT "C4'" "O4'" sing N N 311 DT "C4'" "C3'" sing N N 312 DT "C4'" "H4'" sing N N 313 DT "O4'" "C1'" sing N N 314 DT "C3'" "O3'" sing N N 315 DT "C3'" "C2'" sing N N 316 DT "C3'" "H3'" sing N N 317 DT "O3'" "HO3'" sing N N 318 DT "C2'" "C1'" sing N N 319 DT "C2'" "H2'" sing N N 320 DT "C2'" "H2''" sing N N 321 DT "C1'" N1 sing N N 322 DT "C1'" "H1'" sing N N 323 DT N1 C2 sing N N 324 DT N1 C6 sing N N 325 DT C2 O2 doub N N 326 DT C2 N3 sing N N 327 DT N3 C4 sing N N 328 DT N3 H3 sing N N 329 DT C4 O4 doub N N 330 DT C4 C5 sing N N 331 DT C5 C7 sing N N 332 DT C5 C6 doub N N 333 DT C7 H71 sing N N 334 DT C7 H72 sing N N 335 DT C7 H73 sing N N 336 DT C6 H6 sing N N 337 GLN N CA sing N N 338 GLN N H sing N N 339 GLN N H2 sing N N 340 GLN CA C sing N N 341 GLN CA CB sing N N 342 GLN CA HA sing N N 343 GLN C O doub N N 344 GLN C OXT sing N N 345 GLN CB CG sing N N 346 GLN CB HB2 sing N N 347 GLN CB HB3 sing N N 348 GLN CG CD sing N N 349 GLN CG HG2 sing N N 350 GLN CG HG3 sing N N 351 GLN CD OE1 doub N N 352 GLN CD NE2 sing N N 353 GLN NE2 HE21 sing N N 354 GLN NE2 HE22 sing N N 355 GLN OXT HXT sing N N 356 GLU N CA sing N N 357 GLU N H sing N N 358 GLU N H2 sing N N 359 GLU CA C sing N N 360 GLU CA CB sing N N 361 GLU CA HA sing N N 362 GLU C O doub N N 363 GLU C OXT sing N N 364 GLU CB CG sing N N 365 GLU CB HB2 sing N N 366 GLU CB HB3 sing N N 367 GLU CG CD sing N N 368 GLU CG HG2 sing N N 369 GLU CG HG3 sing N N 370 GLU CD OE1 doub N N 371 GLU CD OE2 sing N N 372 GLU OE2 HE2 sing N N 373 GLU OXT HXT sing N N 374 GLY N CA sing N N 375 GLY N H sing N N 376 GLY N H2 sing N N 377 GLY CA C sing N N 378 GLY CA HA2 sing N N 379 GLY CA HA3 sing N N 380 GLY C O doub N N 381 GLY C OXT sing N N 382 GLY OXT HXT sing N N 383 HIS N CA sing N N 384 HIS N H sing N N 385 HIS N H2 sing N N 386 HIS CA C sing N N 387 HIS CA CB sing N N 388 HIS CA HA sing N N 389 HIS C O doub N N 390 HIS C OXT sing N N 391 HIS CB CG sing N N 392 HIS CB HB2 sing N N 393 HIS CB HB3 sing N N 394 HIS CG ND1 sing Y N 395 HIS CG CD2 doub Y N 396 HIS ND1 CE1 doub Y N 397 HIS ND1 HD1 sing N N 398 HIS CD2 NE2 sing Y N 399 HIS CD2 HD2 sing N N 400 HIS CE1 NE2 sing Y N 401 HIS CE1 HE1 sing N N 402 HIS NE2 HE2 sing N N 403 HIS OXT HXT sing N N 404 HOH O H1 sing N N 405 HOH O H2 sing N N 406 ILE N CA sing N N 407 ILE N H sing N N 408 ILE N H2 sing N N 409 ILE CA C sing N N 410 ILE CA CB sing N N 411 ILE CA HA sing N N 412 ILE C O doub N N 413 ILE C OXT sing N N 414 ILE CB CG1 sing N N 415 ILE CB CG2 sing N N 416 ILE CB HB sing N N 417 ILE CG1 CD1 sing N N 418 ILE CG1 HG12 sing N N 419 ILE CG1 HG13 sing N N 420 ILE CG2 HG21 sing N N 421 ILE CG2 HG22 sing N N 422 ILE CG2 HG23 sing N N 423 ILE CD1 HD11 sing N N 424 ILE CD1 HD12 sing N N 425 ILE CD1 HD13 sing N N 426 ILE OXT HXT sing N N 427 LEU N CA sing N N 428 LEU N H sing N N 429 LEU N H2 sing N N 430 LEU CA C sing N N 431 LEU CA CB sing N N 432 LEU CA HA sing N N 433 LEU C O doub N N 434 LEU C OXT sing N N 435 LEU CB CG sing N N 436 LEU CB HB2 sing N N 437 LEU CB HB3 sing N N 438 LEU CG CD1 sing N N 439 LEU CG CD2 sing N N 440 LEU CG HG sing N N 441 LEU CD1 HD11 sing N N 442 LEU CD1 HD12 sing N N 443 LEU CD1 HD13 sing N N 444 LEU CD2 HD21 sing N N 445 LEU CD2 HD22 sing N N 446 LEU CD2 HD23 sing N N 447 LEU OXT HXT sing N N 448 LYS N CA sing N N 449 LYS N H sing N N 450 LYS N H2 sing N N 451 LYS CA C sing N N 452 LYS CA CB sing N N 453 LYS CA HA sing N N 454 LYS C O doub N N 455 LYS C OXT sing N N 456 LYS CB CG sing N N 457 LYS CB HB2 sing N N 458 LYS CB HB3 sing N N 459 LYS CG CD sing N N 460 LYS CG HG2 sing N N 461 LYS CG HG3 sing N N 462 LYS CD CE sing N N 463 LYS CD HD2 sing N N 464 LYS CD HD3 sing N N 465 LYS CE NZ sing N N 466 LYS CE HE2 sing N N 467 LYS CE HE3 sing N N 468 LYS NZ HZ1 sing N N 469 LYS NZ HZ2 sing N N 470 LYS NZ HZ3 sing N N 471 LYS OXT HXT sing N N 472 MET N CA sing N N 473 MET N H sing N N 474 MET N H2 sing N N 475 MET CA C sing N N 476 MET CA CB sing N N 477 MET CA HA sing N N 478 MET C O doub N N 479 MET C OXT sing N N 480 MET CB CG sing N N 481 MET CB HB2 sing N N 482 MET CB HB3 sing N N 483 MET CG SD sing N N 484 MET CG HG2 sing N N 485 MET CG HG3 sing N N 486 MET SD CE sing N N 487 MET CE HE1 sing N N 488 MET CE HE2 sing N N 489 MET CE HE3 sing N N 490 MET OXT HXT sing N N 491 PHE N CA sing N N 492 PHE N H sing N N 493 PHE N H2 sing N N 494 PHE CA C sing N N 495 PHE CA CB sing N N 496 PHE CA HA sing N N 497 PHE C O doub N N 498 PHE C OXT sing N N 499 PHE CB CG sing N N 500 PHE CB HB2 sing N N 501 PHE CB HB3 sing N N 502 PHE CG CD1 doub Y N 503 PHE CG CD2 sing Y N 504 PHE CD1 CE1 sing Y N 505 PHE CD1 HD1 sing N N 506 PHE CD2 CE2 doub Y N 507 PHE CD2 HD2 sing N N 508 PHE CE1 CZ doub Y N 509 PHE CE1 HE1 sing N N 510 PHE CE2 CZ sing Y N 511 PHE CE2 HE2 sing N N 512 PHE CZ HZ sing N N 513 PHE OXT HXT sing N N 514 PRO N CA sing N N 515 PRO N CD sing N N 516 PRO N H sing N N 517 PRO CA C sing N N 518 PRO CA CB sing N N 519 PRO CA HA sing N N 520 PRO C O doub N N 521 PRO C OXT sing N N 522 PRO CB CG sing N N 523 PRO CB HB2 sing N N 524 PRO CB HB3 sing N N 525 PRO CG CD sing N N 526 PRO CG HG2 sing N N 527 PRO CG HG3 sing N N 528 PRO CD HD2 sing N N 529 PRO CD HD3 sing N N 530 PRO OXT HXT sing N N 531 SER N CA sing N N 532 SER N H sing N N 533 SER N H2 sing N N 534 SER CA C sing N N 535 SER CA CB sing N N 536 SER CA HA sing N N 537 SER C O doub N N 538 SER C OXT sing N N 539 SER CB OG sing N N 540 SER CB HB2 sing N N 541 SER CB HB3 sing N N 542 SER OG HG sing N N 543 SER OXT HXT sing N N 544 THR N CA sing N N 545 THR N H sing N N 546 THR N H2 sing N N 547 THR CA C sing N N 548 THR CA CB sing N N 549 THR CA HA sing N N 550 THR C O doub N N 551 THR C OXT sing N N 552 THR CB OG1 sing N N 553 THR CB CG2 sing N N 554 THR CB HB sing N N 555 THR OG1 HG1 sing N N 556 THR CG2 HG21 sing N N 557 THR CG2 HG22 sing N N 558 THR CG2 HG23 sing N N 559 THR OXT HXT sing N N 560 TYR N CA sing N N 561 TYR N H sing N N 562 TYR N H2 sing N N 563 TYR CA C sing N N 564 TYR CA CB sing N N 565 TYR CA HA sing N N 566 TYR C O doub N N 567 TYR C OXT sing N N 568 TYR CB CG sing N N 569 TYR CB HB2 sing N N 570 TYR CB HB3 sing N N 571 TYR CG CD1 doub Y N 572 TYR CG CD2 sing Y N 573 TYR CD1 CE1 sing Y N 574 TYR CD1 HD1 sing N N 575 TYR CD2 CE2 doub Y N 576 TYR CD2 HD2 sing N N 577 TYR CE1 CZ doub Y N 578 TYR CE1 HE1 sing N N 579 TYR CE2 CZ sing Y N 580 TYR CE2 HE2 sing N N 581 TYR CZ OH sing N N 582 TYR OH HH sing N N 583 TYR OXT HXT sing N N 584 VAL N CA sing N N 585 VAL N H sing N N 586 VAL N H2 sing N N 587 VAL CA C sing N N 588 VAL CA CB sing N N 589 VAL CA HA sing N N 590 VAL C O doub N N 591 VAL C OXT sing N N 592 VAL CB CG1 sing N N 593 VAL CB CG2 sing N N 594 VAL CB HB sing N N 595 VAL CG1 HG11 sing N N 596 VAL CG1 HG12 sing N N 597 VAL CG1 HG13 sing N N 598 VAL CG2 HG21 sing N N 599 VAL CG2 HG22 sing N N 600 VAL CG2 HG23 sing N N 601 VAL OXT HXT sing N N 602 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3G6V 'double helix' 3G6V 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DA 1 1_555 C DT 12 1_555 -0.098 -0.261 0.245 2.026 -8.246 -1.372 1 P_DA867:DT847_T P 867 ? T 847 ? 20 1 1 B DG 2 1_555 C DC 11 1_555 0.007 -0.093 0.011 6.884 -4.462 -0.839 2 P_DG868:DC846_T P 868 ? T 846 ? 19 1 1 B DG 3 1_555 C DC 10 1_555 -0.046 -0.068 -0.488 -4.544 -7.044 2.610 3 P_DG869:DC845_T P 869 ? T 845 ? 19 1 1 B DA 4 1_555 C DT 9 1_555 0.065 -0.178 0.045 12.385 -7.839 -0.221 4 P_DA870:DT844_T P 870 ? T 844 ? 20 1 1 B DC 5 1_555 C DG 8 1_555 0.115 -0.099 -0.186 13.912 -15.202 0.674 5 P_DC871:DG843_T P 871 ? T 843 ? 19 1 1 B DC 6 1_555 C DG 7 1_555 0.008 -0.154 -0.075 5.924 -13.388 0.022 6 P_DC872:DG842_T P 872 ? T 842 ? 19 1 1 B DOC 7 1_555 C DG 6 1_555 0.093 -0.227 -0.239 2.466 -1.714 -0.510 7 P_DOC873:DG841_T P 873 ? T 841 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DA 1 1_555 C DT 12 1_555 B DG 2 1_555 C DC 11 1_555 0.456 -0.736 3.279 1.618 0.321 31.679 -1.405 -0.536 3.290 0.588 -2.962 31.721 1 PP_DA867DG868:DC846DT847_TT P 867 ? T 847 ? P 868 ? T 846 ? 1 B DG 2 1_555 C DC 11 1_555 B DG 3 1_555 C DC 10 1_555 0.316 -0.604 3.679 4.146 2.049 36.222 -1.282 0.140 3.654 3.279 -6.636 36.506 2 PP_DG868DG869:DC845DC846_TT P 868 ? T 846 ? P 869 ? T 845 ? 1 B DG 3 1_555 C DC 10 1_555 B DA 4 1_555 C DT 9 1_555 -0.207 -0.247 2.916 -6.074 3.037 27.786 -1.116 -0.814 2.853 6.206 12.415 28.588 3 PP_DG869DA870:DT844DC845_TT P 869 ? T 845 ? P 870 ? T 844 ? 1 B DA 4 1_555 C DT 9 1_555 B DC 5 1_555 C DG 8 1_555 0.567 -1.141 3.274 0.197 2.769 33.515 -2.419 -0.948 3.175 4.791 -0.342 33.626 4 PP_DA870DC871:DG843DT844_TT P 870 ? T 844 ? P 871 ? T 843 ? 1 B DC 5 1_555 C DG 8 1_555 B DC 6 1_555 C DG 7 1_555 -0.373 -1.753 3.477 -2.781 11.081 30.129 -5.098 0.186 2.703 20.417 5.125 32.176 5 PP_DC871DC872:DG842DG843_TT P 871 ? T 843 ? P 872 ? T 842 ? 1 B DC 6 1_555 C DG 7 1_555 B DOC 7 1_555 C DG 6 1_555 -0.566 -1.245 3.610 1.226 2.437 24.919 -3.649 1.697 3.443 5.626 -2.830 25.065 6 PP_DC872DOC873:DG841DG842_TT P 872 ? T 842 ? P 873 ? T 841 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 "ADENOSINE-5'-TRIPHOSPHATE" ATP 5 'MAGNESIUM ION' MG 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2FLL _pdbx_initial_refinement_model.details ? #