HEADER REPLICATION/DNA 09-FEB-09 3G6Y TITLE TERNARY COMPLEX OF DNA POLYMERASE IOTA:DNA:DTTP WITH AN ABASIC SITE AT TITLE 2 THE TEMPLATING POSITION COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE IOTA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RAD30 HOMOLOG B, ETA2; COMPND 5 EC: 2.7.7.7; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PRIMER DNA STRAND; COMPND 9 CHAIN: P; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: TEMPLATE DNA STRAND; COMPND 13 CHAIN: T; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: POLI, RAD30B; SOURCE 6 EXPRESSION_SYSTEM: SACCHAROMYCES CEREVISIAE; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4932; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BJ5464; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PBJ941; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 OTHER_DETAILS: CHEMICAL OLIGONUCLEOTIDE SYNTHESIS; SOURCE 14 MOL_ID: 3; SOURCE 15 SYNTHETIC: YES; SOURCE 16 OTHER_DETAILS: CHEMICAL OLIGONUCLEOTIDE SYNTHESIS KEYWDS DNA POLYMERASE, Y-FAMILY, LESION BYPASS, ABASIC SITE, TERNARY KEYWDS 2 COMPLEX, DNA DAMAGE, DNA REPAIR, DNA REPLICATION, DNA SYNTHESIS, KEYWDS 3 DNA-BINDING, DNA-DIRECTED DNA POLYMERASE, MAGNESIUM, METAL-BINDING, KEYWDS 4 MUTATOR PROTEIN, NUCLEOTIDYLTRANSFERASE, NUCLEUS, SCHIFF BASE, KEYWDS 5 TRANSFERASE, REPLICATION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.T.NAIR,A.K.AGGARWAL REVDAT 5 06-SEP-23 3G6Y 1 REMARK LINK REVDAT 4 24-JUL-19 3G6Y 1 REMARK LINK REVDAT 3 01-NOV-17 3G6Y 1 REMARK REVDAT 2 13-JUL-11 3G6Y 1 VERSN REVDAT 1 12-MAY-09 3G6Y 0 JRNL AUTH D.T.NAIR,R.E.JOHNSON,L.PRAKASH,S.PRAKASH,A.K.AGGARWAL JRNL TITL DNA SYNTHESIS ACROSS AN ABASIC LESION BY HUMAN DNA JRNL TITL 2 POLYMERASE IOTA JRNL REF STRUCTURE V. 17 530 2009 JRNL REFN ISSN 0969-2126 JRNL PMID 19368886 JRNL DOI 10.1016/J.STR.2009.02.015 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.61 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 30802 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2697 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2189 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.01 REMARK 3 BIN R VALUE (WORKING SET) : 0.2280 REMARK 3 BIN FREE R VALUE SET COUNT : 194 REMARK 3 BIN FREE R VALUE : 0.2640 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2876 REMARK 3 NUCLEIC ACID ATOMS : 294 REMARK 3 HETEROGEN ATOMS : 31 REMARK 3 SOLVENT ATOMS : 213 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.30000 REMARK 3 B22 (A**2) : 0.30000 REMARK 3 B33 (A**2) : -0.46000 REMARK 3 B12 (A**2) : 0.15000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.214 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.184 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.124 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.134 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.928 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.915 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3271 ; 0.024 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4476 ; 2.230 ; 2.107 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 370 ; 6.657 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 124 ;40.029 ;24.839 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 543 ;20.320 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;22.769 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 524 ; 0.175 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2295 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1860 ; 1.184 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2998 ; 2.080 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1411 ; 3.293 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1478 ; 4.867 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 25 A 37 REMARK 3 RESIDUE RANGE : A 99 A 224 REMARK 3 ORIGIN FOR THE GROUP (A): 16.1778 16.8369 5.9693 REMARK 3 T TENSOR REMARK 3 T11: 0.0844 T22: 0.0628 REMARK 3 T33: 0.0062 T12: 0.0134 REMARK 3 T13: -0.0182 T23: 0.0017 REMARK 3 L TENSOR REMARK 3 L11: 0.3275 L22: 0.4619 REMARK 3 L33: 1.3454 L12: 0.0299 REMARK 3 L13: 0.1093 L23: 0.2451 REMARK 3 S TENSOR REMARK 3 S11: 0.0527 S12: 0.0170 S13: 0.0054 REMARK 3 S21: -0.0215 S22: -0.0586 S23: -0.0051 REMARK 3 S31: 0.0931 S32: 0.1449 S33: 0.0060 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 38 A 98 REMARK 3 ORIGIN FOR THE GROUP (A): -4.6940 16.2614 23.6456 REMARK 3 T TENSOR REMARK 3 T11: 0.1275 T22: 0.0930 REMARK 3 T33: 0.1320 T12: -0.1023 REMARK 3 T13: 0.0468 T23: -0.0440 REMARK 3 L TENSOR REMARK 3 L11: 3.5547 L22: 3.3347 REMARK 3 L33: 4.3120 L12: -0.8785 REMARK 3 L13: -0.5354 L23: 0.4700 REMARK 3 S TENSOR REMARK 3 S11: 0.0504 S12: 0.0019 S13: -0.2335 REMARK 3 S21: 0.1669 S22: -0.1234 S23: 0.6409 REMARK 3 S31: 0.5301 S32: -0.2980 S33: 0.0730 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 225 A 287 REMARK 3 ORIGIN FOR THE GROUP (A): 0.3789 35.0782 -3.4429 REMARK 3 T TENSOR REMARK 3 T11: 0.1160 T22: 0.0357 REMARK 3 T33: 0.2454 T12: 0.0072 REMARK 3 T13: -0.1063 T23: -0.0051 REMARK 3 L TENSOR REMARK 3 L11: 3.3992 L22: 2.1200 REMARK 3 L33: 2.4852 L12: -0.5810 REMARK 3 L13: 1.8721 L23: 0.6946 REMARK 3 S TENSOR REMARK 3 S11: -0.3699 S12: 0.0657 S13: 0.7371 REMARK 3 S21: -0.0065 S22: -0.2602 S23: -0.1025 REMARK 3 S31: -0.1338 S32: -0.1280 S33: 0.6302 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 298 A 414 REMARK 3 ORIGIN FOR THE GROUP (A): 7.3750 41.1514 32.7388 REMARK 3 T TENSOR REMARK 3 T11: 0.3434 T22: 0.1228 REMARK 3 T33: 0.2937 T12: -0.1303 REMARK 3 T13: 0.3148 T23: -0.1380 REMARK 3 L TENSOR REMARK 3 L11: 1.9567 L22: 7.7708 REMARK 3 L33: 4.0175 L12: 1.1470 REMARK 3 L13: -0.6757 L23: -0.0232 REMARK 3 S TENSOR REMARK 3 S11: 0.7344 S12: -0.2082 S13: 0.6464 REMARK 3 S21: 1.0823 S22: -0.4775 S23: 0.9798 REMARK 3 S31: -0.1902 S32: 0.4929 S33: -0.2568 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 4 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : P 867 P 873 REMARK 3 RESIDUE RANGE : T 840 T 847 REMARK 3 RESIDUE RANGE : A 875 A 875 REMARK 3 RESIDUE RANGE : A 871 A 872 REMARK 3 ORIGIN FOR THE GROUP (A): 5.8935 38.7603 16.8043 REMARK 3 T TENSOR REMARK 3 T11: 0.0759 T22: 0.0761 REMARK 3 T33: 0.5292 T12: -0.0510 REMARK 3 T13: -0.0504 T23: -0.0942 REMARK 3 L TENSOR REMARK 3 L11: 2.8484 L22: 1.0570 REMARK 3 L33: 0.8477 L12: -0.5210 REMARK 3 L13: -1.0197 L23: 0.8673 REMARK 3 S TENSOR REMARK 3 S11: 0.0606 S12: -0.2080 S13: 0.8472 REMARK 3 S21: -0.1474 S22: -0.0829 S23: 0.3592 REMARK 3 S31: -0.1332 S32: 0.0228 S33: 0.0223 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3G6Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1000051500. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUL-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : SI(111) DOUBLE-CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33416 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 200 DATA REDUNDANCY : 10.50 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 33.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.09 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.50 REMARK 200 R MERGE FOR SHELL (I) : 0.19700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 9.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 2FLL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS GREW IN 24 HOURS, PH 6.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 135.21533 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 67.60767 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 101.41150 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 33.80383 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 169.01917 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 135.21533 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 67.60767 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 33.80383 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 101.41150 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 169.01917 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, P, T REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 LEU A 3 REMARK 465 ALA A 4 REMARK 465 ASP A 5 REMARK 465 VAL A 6 REMARK 465 GLY A 7 REMARK 465 ALA A 8 REMARK 465 ALA A 9 REMARK 465 ALA A 10 REMARK 465 SER A 11 REMARK 465 SER A 12 REMARK 465 GLN A 13 REMARK 465 GLY A 14 REMARK 465 VAL A 15 REMARK 465 HIS A 16 REMARK 465 ASP A 17 REMARK 465 GLN A 18 REMARK 465 VAL A 19 REMARK 465 LEU A 20 REMARK 465 PRO A 21 REMARK 465 THR A 22 REMARK 465 PRO A 23 REMARK 465 ASN A 24 REMARK 465 LYS A 371 REMARK 465 LEU A 372 REMARK 465 GLY A 373 REMARK 465 THR A 374 REMARK 465 GLY A 375 REMARK 465 ASN A 376 REMARK 465 TYR A 377 REMARK 465 ASP A 378 REMARK 465 VAL A 395 REMARK 465 ASN A 396 REMARK 465 VAL A 397 REMARK 465 LYS A 398 REMARK 465 MET A 399 REMARK 465 PRO A 400 REMARK 465 PHE A 401 REMARK 465 HIS A 402 REMARK 465 LEU A 403 REMARK 465 ALA A 415 REMARK 465 LEU A 416 REMARK 465 ASN A 417 REMARK 465 THR A 418 REMARK 465 ALA A 419 REMARK 465 LYS A 420 REMARK 465 DT T 837 REMARK 465 DC T 838 REMARK 465 DT T 839 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 146 CG OD1 OD2 REMARK 470 LYS A 245 CG CD CE NZ REMARK 470 LYS A 271 CG CD CE NZ REMARK 470 VAL A 315 CG1 CG2 REMARK 470 GLU A 316 CG CD OE1 OE2 REMARK 470 LYS A 338 CG CD CE NZ REMARK 470 TYR A 349 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER A 350 OG REMARK 470 SER A 351 OG REMARK 470 GLU A 352 CG CD OE1 OE2 REMARK 470 LYS A 353 CG CD CE NZ REMARK 470 HIS A 354 CG ND1 CD2 CE1 NE2 REMARK 470 TYR A 355 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 HIS A 367 CG ND1 CD2 CE1 NE2 REMARK 470 VAL A 379 CG1 CG2 REMARK 470 ILE A 386 CG1 CG2 CD1 REMARK 470 LYS A 389 CG CD CE NZ REMARK 470 LEU A 405 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O5' DA P 867 O3' DT T 847 10665 1.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 117 CB SER A 117 OG 0.089 REMARK 500 ARG A 122 CD ARG A 122 NE -0.110 REMARK 500 LYS A 207 CE LYS A 207 NZ -0.152 REMARK 500 CYS A 249 CB CYS A 249 SG 0.105 REMARK 500 DA P 867 C5' DA P 867 C4' 0.053 REMARK 500 DA P 867 C2' DA P 867 C1' 0.065 REMARK 500 DC P 872 O3' DC P 872 C3' -0.049 REMARK 500 DC P 872 O3' DOC P 873 P -0.142 REMARK 500 3DR T 840 O3' DG T 841 P 0.122 REMARK 500 DG T 842 O3' DG T 842 C3' -0.061 REMARK 500 DT T 844 O3' DT T 844 C3' -0.050 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 62 CA - CB - CG ANGL. DEV. = 15.3 DEGREES REMARK 500 ARG A 122 CG - CD - NE ANGL. DEV. = -16.4 DEGREES REMARK 500 ARG A 122 CD - NE - CZ ANGL. DEV. = 11.5 DEGREES REMARK 500 ARG A 122 NE - CZ - NH1 ANGL. DEV. = 8.4 DEGREES REMARK 500 ARG A 122 NE - CZ - NH2 ANGL. DEV. = -11.9 DEGREES REMARK 500 ARG A 184 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 184 NE - CZ - NH2 ANGL. DEV. = -5.8 DEGREES REMARK 500 LEU A 205 CB - CG - CD1 ANGL. DEV. = 11.5 DEGREES REMARK 500 ARG A 259 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 DA P 867 O4' - C1' - N9 ANGL. DEV. = -6.9 DEGREES REMARK 500 DG P 868 O4' - C1' - N9 ANGL. DEV. = 4.1 DEGREES REMARK 500 DG P 868 N1 - C2 - N2 ANGL. DEV. = 5.7 DEGREES REMARK 500 DG P 868 N3 - C2 - N2 ANGL. DEV. = -4.9 DEGREES REMARK 500 DG P 869 O4' - C1' - N9 ANGL. DEV. = 5.4 DEGREES REMARK 500 DG P 869 N1 - C6 - O6 ANGL. DEV. = -5.2 DEGREES REMARK 500 DA P 870 O5' - P - OP2 ANGL. DEV. = -6.7 DEGREES REMARK 500 DA P 870 O4' - C4' - C3' ANGL. DEV. = 5.3 DEGREES REMARK 500 DA P 870 O4' - C1' - N9 ANGL. DEV. = 10.0 DEGREES REMARK 500 DC P 872 O4' - C1' - N1 ANGL. DEV. = 3.3 DEGREES REMARK 500 3DR T 840 C3' - O3' - P ANGL. DEV. = 11.9 DEGREES REMARK 500 DG T 841 O3' - P - OP1 ANGL. DEV. = 9.1 DEGREES REMARK 500 DG T 841 C3' - C2' - C1' ANGL. DEV. = -5.3 DEGREES REMARK 500 DG T 841 O4' - C1' - N9 ANGL. DEV. = 2.5 DEGREES REMARK 500 DG T 841 C5 - C6 - N1 ANGL. DEV. = 3.6 DEGREES REMARK 500 DG T 841 C5 - C6 - O6 ANGL. DEV. = -5.7 DEGREES REMARK 500 DG T 842 O5' - P - OP2 ANGL. DEV. = -5.7 DEGREES REMARK 500 DG T 842 P - O5' - C5' ANGL. DEV. = 16.5 DEGREES REMARK 500 DG T 842 O4' - C1' - N9 ANGL. DEV. = -5.4 DEGREES REMARK 500 DG T 843 O5' - P - OP2 ANGL. DEV. = -9.9 DEGREES REMARK 500 DT T 844 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 DT T 844 C4 - C5 - C7 ANGL. DEV. = 4.1 DEGREES REMARK 500 DT T 844 C6 - C5 - C7 ANGL. DEV. = -4.1 DEGREES REMARK 500 DC T 845 O5' - C5' - C4' ANGL. DEV. = -5.8 DEGREES REMARK 500 DC T 845 O4' - C1' - N1 ANGL. DEV. = 2.7 DEGREES REMARK 500 DC T 846 O4' - C1' - N1 ANGL. DEV. = -4.8 DEGREES REMARK 500 DT T 847 O4' - C1' - N1 ANGL. DEV. = -4.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 26 -78.43 -96.77 REMARK 500 CYS A 37 57.45 26.65 REMARK 500 ASP A 52 -8.28 52.40 REMARK 500 LYS A 60 -125.36 56.61 REMARK 500 SER A 145 43.45 -68.95 REMARK 500 ASP A 146 -57.01 -147.74 REMARK 500 ALA A 252 -35.28 -38.35 REMARK 500 LYS A 271 39.36 -90.72 REMARK 500 GLU A 272 -34.97 -151.68 REMARK 500 ASP A 289 100.84 -169.82 REMARK 500 PHE A 308 114.79 -176.57 REMARK 500 LYS A 310 -4.11 93.53 REMARK 500 GLU A 314 50.54 96.99 REMARK 500 VAL A 315 -58.41 162.70 REMARK 500 LYS A 318 -23.94 -143.94 REMARK 500 CYS A 333 -82.33 -55.96 REMARK 500 GLN A 334 -36.61 -17.67 REMARK 500 SER A 350 -94.26 116.80 REMARK 500 GLU A 352 35.44 -73.52 REMARK 500 LYS A 353 70.35 -52.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 871 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 34 OD2 REMARK 620 2 LEU A 35 O 86.8 REMARK 620 3 ASP A 126 OD1 97.1 90.1 REMARK 620 4 TTP A 875 O1A 99.9 171.5 94.1 REMARK 620 5 TTP A 875 O2B 177.4 93.2 85.5 79.9 REMARK 620 6 TTP A 875 O1G 96.4 90.4 166.5 83.8 81.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 872 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 127 OE2 REMARK 620 2 TTP A 875 O1A 140.4 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TTP A 875 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 871 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 872 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2FLL RELATED DB: PDB REMARK 900 RELATED ID: 3G6V RELATED DB: PDB REMARK 900 RELATED ID: 3G6X RELATED DB: PDB DBREF 3G6Y A 1 420 UNP Q9UNA4 POLI_HUMAN 1 420 DBREF 3G6Y P 867 873 PDB 3G6Y 3G6Y 867 873 DBREF 3G6Y T 837 847 PDB 3G6Y 3G6Y 837 847 SEQRES 1 A 420 MET GLU LEU ALA ASP VAL GLY ALA ALA ALA SER SER GLN SEQRES 2 A 420 GLY VAL HIS ASP GLN VAL LEU PRO THR PRO ASN ALA SER SEQRES 3 A 420 SER ARG VAL ILE VAL HIS VAL ASP LEU ASP CYS PHE TYR SEQRES 4 A 420 ALA GLN VAL GLU MET ILE SER ASN PRO GLU LEU LYS ASP SEQRES 5 A 420 LYS PRO LEU GLY VAL GLN GLN LYS TYR LEU VAL VAL THR SEQRES 6 A 420 CYS ASN TYR GLU ALA ARG LYS LEU GLY VAL LYS LYS LEU SEQRES 7 A 420 MET ASN VAL ARG ASP ALA LYS GLU LYS CYS PRO GLN LEU SEQRES 8 A 420 VAL LEU VAL ASN GLY GLU ASP LEU THR ARG TYR ARG GLU SEQRES 9 A 420 MET SER TYR LYS VAL THR GLU LEU LEU GLU GLU PHE SER SEQRES 10 A 420 PRO VAL VAL GLU ARG LEU GLY PHE ASP GLU ASN PHE VAL SEQRES 11 A 420 ASP LEU THR GLU MET VAL GLU LYS ARG LEU GLN GLN LEU SEQRES 12 A 420 GLN SER ASP GLU LEU SER ALA VAL THR VAL SER GLY HIS SEQRES 13 A 420 VAL TYR ASN ASN GLN SER ILE ASN LEU LEU ASP VAL LEU SEQRES 14 A 420 HIS ILE ARG LEU LEU VAL GLY SER GLN ILE ALA ALA GLU SEQRES 15 A 420 MET ARG GLU ALA MET TYR ASN GLN LEU GLY LEU THR GLY SEQRES 16 A 420 CYS ALA GLY VAL ALA SER ASN LYS LEU LEU ALA LYS LEU SEQRES 17 A 420 VAL SER GLY VAL PHE LYS PRO ASN GLN GLN THR VAL LEU SEQRES 18 A 420 LEU PRO GLU SER CYS GLN HIS LEU ILE HIS SER LEU ASN SEQRES 19 A 420 HIS ILE LYS GLU ILE PRO GLY ILE GLY TYR LYS THR ALA SEQRES 20 A 420 LYS CYS LEU GLU ALA LEU GLY ILE ASN SER VAL ARG ASP SEQRES 21 A 420 LEU GLN THR PHE SER PRO LYS ILE LEU GLU LYS GLU LEU SEQRES 22 A 420 GLY ILE SER VAL ALA GLN ARG ILE GLN LYS LEU SER PHE SEQRES 23 A 420 GLY GLU ASP ASN SER PRO VAL ILE LEU SER GLY PRO PRO SEQRES 24 A 420 GLN SER PHE SER GLU GLU ASP SER PHE LYS LYS CYS SER SEQRES 25 A 420 SER GLU VAL GLU ALA LYS ASN LYS ILE GLU GLU LEU LEU SEQRES 26 A 420 ALA SER LEU LEU ASN ARG VAL CYS GLN ASP GLY ARG LYS SEQRES 27 A 420 PRO HIS THR VAL ARG LEU ILE ILE ARG ARG TYR SER SER SEQRES 28 A 420 GLU LYS HIS TYR GLY ARG GLU SER ARG GLN CYS PRO ILE SEQRES 29 A 420 PRO SER HIS VAL ILE GLN LYS LEU GLY THR GLY ASN TYR SEQRES 30 A 420 ASP VAL MET THR PRO MET VAL ASP ILE LEU MET LYS LEU SEQRES 31 A 420 PHE ARG ASN MET VAL ASN VAL LYS MET PRO PHE HIS LEU SEQRES 32 A 420 THR LEU LEU SER VAL CYS PHE CYS ASN LEU LYS ALA LEU SEQRES 33 A 420 ASN THR ALA LYS SEQRES 1 P 7 DA DG DG DA DC DC DOC SEQRES 1 T 11 DT DC DT 3DR DG DG DG DT DC DC DT MODRES 3G6Y DOC P 873 DC 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE HET DOC P 873 18 HET 3DR T 840 11 HET TTP A 875 29 HET MG A 871 1 HET MG A 872 1 HETNAM DOC 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE HETNAM 3DR 1',2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE HETNAM TTP THYMIDINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION HETSYN 3DR ABASIC DIDEOXYRIBOSE FORMUL 2 DOC C9 H14 N3 O6 P FORMUL 3 3DR C5 H11 O6 P FORMUL 4 TTP C10 H17 N2 O14 P3 FORMUL 5 MG 2(MG 2+) FORMUL 7 HOH *213(H2 O) HELIX 1 1 CYS A 37 ASN A 47 1 11 HELIX 2 2 PRO A 48 LYS A 51 5 4 HELIX 3 3 ASN A 67 LEU A 73 1 7 HELIX 4 4 VAL A 81 CYS A 88 1 8 HELIX 5 5 LEU A 99 SER A 117 1 19 HELIX 6 6 LEU A 132 LEU A 143 1 12 HELIX 7 7 ASP A 146 VAL A 151 5 6 HELIX 8 8 ASN A 159 GLN A 161 5 3 HELIX 9 9 ASP A 167 GLY A 192 1 26 HELIX 10 10 ASN A 202 GLY A 211 1 10 HELIX 11 11 LEU A 222 GLU A 224 5 3 HELIX 12 12 SER A 225 LEU A 233 1 9 HELIX 13 13 HIS A 235 ILE A 239 5 5 HELIX 14 14 GLY A 243 LEU A 253 1 11 HELIX 15 15 SER A 257 PHE A 264 1 8 HELIX 16 16 SER A 265 PHE A 286 1 22 HELIX 17 17 LYS A 318 ASP A 335 1 18 HELIX 18 18 PRO A 365 GLN A 370 1 6 HELIX 19 19 VAL A 379 ASN A 393 1 15 SHEET 1 A 6 VAL A 120 LEU A 123 0 SHEET 2 A 6 GLU A 127 ASP A 131 -1 O GLU A 127 N LEU A 123 SHEET 3 A 6 ILE A 30 LEU A 35 -1 N VAL A 33 O ASN A 128 SHEET 4 A 6 GLY A 195 ALA A 200 -1 O CYS A 196 N ASP A 34 SHEET 5 A 6 GLN A 218 VAL A 220 1 O THR A 219 N VAL A 199 SHEET 6 A 6 HIS A 156 VAL A 157 1 N HIS A 156 O GLN A 218 SHEET 1 B 4 MET A 79 ASN A 80 0 SHEET 2 B 4 LEU A 62 CYS A 66 -1 N VAL A 63 O MET A 79 SHEET 3 B 4 LEU A 55 GLN A 59 -1 N VAL A 57 O THR A 65 SHEET 4 B 4 VAL A 92 ASN A 95 1 O VAL A 94 N GLN A 58 SHEET 1 C 4 SER A 301 SER A 307 0 SHEET 2 C 4 LEU A 405 LYS A 414 -1 O PHE A 410 N PHE A 302 SHEET 3 C 4 LYS A 338 ARG A 347 -1 N ILE A 345 O SER A 407 SHEET 4 C 4 GLU A 358 PRO A 363 -1 O GLU A 358 N ILE A 346 LINK O3' DC P 872 P DOC P 873 1555 1555 1.47 LINK O3' 3DR T 840 P DG T 841 1555 1555 1.73 LINK OD2 ASP A 34 MG MG A 871 1555 1555 2.37 LINK O LEU A 35 MG MG A 871 1555 1555 2.25 LINK OD1 ASP A 126 MG MG A 871 1555 1555 2.05 LINK OE2 GLU A 127 MG MG A 872 1555 1555 2.31 LINK MG MG A 871 O1A TTP A 875 1555 1555 2.26 LINK MG MG A 871 O2B TTP A 875 1555 1555 2.37 LINK MG MG A 871 O1G TTP A 875 1555 1555 2.41 LINK MG MG A 872 O1A TTP A 875 1555 1555 2.25 CISPEP 1 LYS A 214 PRO A 215 0 -7.53 SITE 1 AC1 22 ASP A 34 LEU A 35 ASP A 36 CYS A 37 SITE 2 AC1 22 PHE A 38 TYR A 39 VAL A 64 THR A 65 SITE 3 AC1 22 TYR A 68 ARG A 71 LYS A 77 ASP A 126 SITE 4 AC1 22 LYS A 214 MG A 871 MG A 872 HOH A 905 SITE 5 AC1 22 HOH A 930 HOH A 966 HOH A 975 HOH A 998 SITE 6 AC1 22 DOC P 873 DG T 841 SITE 1 AC2 5 ASP A 34 LEU A 35 ASP A 126 MG A 872 SITE 2 AC2 5 TTP A 875 SITE 1 AC3 5 ASP A 34 ASP A 126 GLU A 127 MG A 871 SITE 2 AC3 5 TTP A 875 CRYST1 98.114 98.114 202.823 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010192 0.005884 0.000000 0.00000 SCALE2 0.000000 0.011769 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004930 0.00000