HEADER TRANSCRIPTION REGULATOR 11-FEB-09 3G85 TITLE CRYSTAL STRUCTURE OF LACI FAMILY TRANSCRIPTION REGULATOR FROM TITLE 2 CLOSTRIDIUM ACETOBUTYLICUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTIONAL REGULATOR (LACI FAMILY); COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 58-335; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM ACETOBUTYLICUM ATCC 824; SOURCE 3 ORGANISM_TAXID: 272562; SOURCE 4 STRAIN: DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787; SOURCE 5 ATCC: 824; SOURCE 6 GENE: CA_C3553; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PSGX3(BC) KEYWDS TRANSCRIPTION REGULATOR, PSI-II, 11230O, STRUCTURAL GENOMICS, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, NYSGXRC, NEW YORK STRUCTURAL GENOMIX RESEARCH CONSORTIUM, KEYWDS 4 DNA-BINDING, TRANSCRIPTION, TRANSCRIPTION REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR A.BAGARIA,S.K.BURLEY,S.SWAMINATHAN,NEW YORK SGX RESEARCH CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (NYSGXRC) REVDAT 3 10-FEB-21 3G85 1 AUTHOR JRNL REMARK SEQADV REVDAT 3 2 1 LINK REVDAT 2 13-JUL-11 3G85 1 VERSN REVDAT 1 24-FEB-09 3G85 0 JRNL AUTH A.BAGARIA,S.K.BURLEY,S.SWAMINATHAN JRNL TITL CRYSTAL STRUCTURE OF LACI FAMILY TRANSCRIPTION REGULATOR JRNL TITL 2 FROM CLOSTRIDIUM ACETOBUTYLICUM JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.84 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.84 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.30 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 26906 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1446 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.84 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.89 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1441 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 71.21 REMARK 3 BIN R VALUE (WORKING SET) : 0.2680 REMARK 3 BIN FREE R VALUE SET COUNT : 70 REMARK 3 BIN FREE R VALUE : 0.3070 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2111 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 214 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.96 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.02000 REMARK 3 B22 (A**2) : -0.02000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.127 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.129 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.091 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.999 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2150 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2906 ; 1.474 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 269 ; 6.227 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 90 ;37.228 ;25.444 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 403 ;13.324 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;15.401 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 341 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1567 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1057 ; 0.216 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1524 ; 0.308 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 188 ; 0.181 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 50 ; 0.308 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 26 ; 0.303 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1393 ; 1.257 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2192 ; 1.814 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 853 ; 3.056 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 714 ; 4.519 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. RESIDUES LISTED AS MISSING IN REMARK 465 ARE DUE TO REMARK 3 LACK OF ELECTRON DENSITY. RESIDUES WITH MISSING ATOMS LISTED IN REMARK 3 REMARK 470 ARE DUE TO LACK OF ELECTRON DENSITY FOR SIDE CHAINS REMARK 3 AND MODELED AS ALANINES. REMARK 4 REMARK 4 3G85 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-FEB-09. REMARK 100 THE DEPOSITION ID IS D_1000051543. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-FEB-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9790 REMARK 200 MONOCHROMATOR : SI(111) CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26906 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.840 REMARK 200 RESOLUTION RANGE LOW (A) : 28.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 11.50 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.84 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 72.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.40300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.890 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS PH 6.5, 28% W/V PEG MME REMARK 280 2000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.98800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.98800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 35.01200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.02900 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 35.01200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.02900 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 49.98800 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 35.01200 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 48.02900 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 49.98800 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 35.01200 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 48.02900 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 96.05800 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 99.97600 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 575 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 673 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 706 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 55 REMARK 465 SER A 56 REMARK 465 LEU A 57 REMARK 465 ARG A 58 REMARK 465 SER A 59 REMARK 465 LYS A 60 REMARK 465 ASN A 61 REMARK 465 SER A 62 REMARK 465 GLN A 63 REMARK 465 SER A 64 REMARK 465 SER A 335 REMARK 465 GLU A 336 REMARK 465 GLY A 337 REMARK 465 HIS A 338 REMARK 465 HIS A 339 REMARK 465 HIS A 340 REMARK 465 HIS A 341 REMARK 465 HIS A 342 REMARK 465 HIS A 343 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 130 79.93 -151.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-11230O RELATED DB: TARGETDB DBREF 3G85 A 58 335 UNP Q97DC5 Q97DC5_CLOAB 58 335 SEQADV 3G85 MSE A 55 UNP Q97DC5 EXPRESSION TAG SEQADV 3G85 SER A 56 UNP Q97DC5 EXPRESSION TAG SEQADV 3G85 LEU A 57 UNP Q97DC5 EXPRESSION TAG SEQADV 3G85 GLU A 336 UNP Q97DC5 EXPRESSION TAG SEQADV 3G85 GLY A 337 UNP Q97DC5 EXPRESSION TAG SEQADV 3G85 HIS A 338 UNP Q97DC5 EXPRESSION TAG SEQADV 3G85 HIS A 339 UNP Q97DC5 EXPRESSION TAG SEQADV 3G85 HIS A 340 UNP Q97DC5 EXPRESSION TAG SEQADV 3G85 HIS A 341 UNP Q97DC5 EXPRESSION TAG SEQADV 3G85 HIS A 342 UNP Q97DC5 EXPRESSION TAG SEQADV 3G85 HIS A 343 UNP Q97DC5 EXPRESSION TAG SEQRES 1 A 289 MSE SER LEU ARG SER LYS ASN SER GLN SER LYS PRO THR SEQRES 2 A 289 ILE ALA LEU TYR TRP SER SER ASP ILE SER VAL ASN ILE SEQRES 3 A 289 ILE SER ARG PHE LEU ARG GLY LEU GLN SER LYS LEU ALA SEQRES 4 A 289 LYS GLN ASN TYR ASN TYR ASN VAL VAL ILE CYS PRO TYR SEQRES 5 A 289 LYS THR ASP CYS LEU HIS LEU GLU LYS GLY ILE SER LYS SEQRES 6 A 289 GLU ASN SER PHE ASP ALA ALA ILE ILE ALA ASN ILE SER SEQRES 7 A 289 ASN TYR ASP LEU GLU TYR LEU ASN LYS ALA SER LEU THR SEQRES 8 A 289 LEU PRO ILE ILE LEU PHE ASN ARG LEU SER ASN LYS TYR SEQRES 9 A 289 SER SER VAL ASN VAL ASP ASN TYR LYS MSE GLY GLU LYS SEQRES 10 A 289 ALA SER LEU LEU PHE ALA LYS LYS ARG TYR LYS SER ALA SEQRES 11 A 289 ALA ALA ILE LEU THR GLU SER LEU ASN ASP ALA MSE ASP SEQRES 12 A 289 ASN ARG ASN LYS GLY PHE ILE GLU THR CYS HIS LYS ASN SEQRES 13 A 289 GLY ILE LYS ILE SER GLU ASN HIS ILE ILE ALA ALA GLU SEQRES 14 A 289 ASN SER ILE HIS GLY GLY VAL ASP ALA ALA LYS LYS LEU SEQRES 15 A 289 MSE LYS LEU LYS ASN THR PRO LYS ALA LEU PHE CYS ASN SEQRES 16 A 289 SER ASP SER ILE ALA LEU GLY VAL ILE SER VAL LEU ASN SEQRES 17 A 289 LYS ARG GLN ILE SER ILE PRO ASP ASP ILE GLU ILE VAL SEQRES 18 A 289 ALA ILE GLY MSE ASN ASP ARG GLU TYR THR GLU PHE SER SEQRES 19 A 289 THR PRO PRO VAL THR ILE VAL ASP ILE PRO ILE GLU GLU SEQRES 20 A 289 MSE ALA GLY THR CYS ILE SER LEU VAL GLU LYS LEU ILE SEQRES 21 A 289 ASN ARG ASP ILE GLU ASN PRO THR SER ILE LEU PHE ASP SEQRES 22 A 289 GLY PRO LEU ILE LEU ARG ASN SER GLU GLY HIS HIS HIS SEQRES 23 A 289 HIS HIS HIS MODRES 3G85 MSE A 168 MET SELENOMETHIONINE MODRES 3G85 MSE A 196 MET SELENOMETHIONINE MODRES 3G85 MSE A 237 MET SELENOMETHIONINE MODRES 3G85 MSE A 279 MET SELENOMETHIONINE MODRES 3G85 MSE A 302 MET SELENOMETHIONINE HET MSE A 168 8 HET MSE A 196 8 HET MSE A 237 8 HET MSE A 279 8 HET MSE A 302 8 HET GOL A 401 6 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 2 GOL C3 H8 O3 FORMUL 3 HOH *214(H2 O) HELIX 1 1 SER A 77 ASN A 79 5 3 HELIX 2 2 ILE A 80 GLN A 95 1 16 HELIX 3 3 CYS A 110 SER A 118 5 9 HELIX 4 4 SER A 132 ALA A 142 1 11 HELIX 5 5 ASP A 164 LYS A 179 1 16 HELIX 6 6 ASN A 193 ASN A 210 1 18 HELIX 7 7 SER A 215 ASN A 217 5 3 HELIX 8 8 SER A 225 MSE A 237 1 13 HELIX 9 9 SER A 250 ARG A 264 1 15 HELIX 10 10 ARG A 282 PHE A 287 1 6 HELIX 11 11 PRO A 298 ASN A 315 1 18 SHEET 1 A 6 ASN A 100 TYR A 106 0 SHEET 2 A 6 THR A 67 SER A 73 1 N LEU A 70 O CYS A 104 SHEET 3 A 6 ALA A 125 ILE A 128 1 O ILE A 127 N ALA A 69 SHEET 4 A 6 ILE A 148 PHE A 151 1 O ILE A 149 N ILE A 128 SHEET 5 A 6 SER A 159 VAL A 163 1 O SER A 159 N LEU A 150 SHEET 6 A 6 SER A 323 PHE A 326 1 O PHE A 326 N ASN A 162 SHEET 1 B 6 ILE A 219 ALA A 221 0 SHEET 2 B 6 ALA A 185 LEU A 188 1 N ALA A 186 O ILE A 220 SHEET 3 B 6 ALA A 245 CYS A 248 1 O PHE A 247 N ILE A 187 SHEET 4 B 6 GLU A 273 GLY A 278 1 O GLU A 273 N LEU A 246 SHEET 5 B 6 THR A 293 ASP A 296 1 O VAL A 295 N GLY A 278 SHEET 6 B 6 LEU A 330 ILE A 331 -1 O ILE A 331 N ILE A 294 LINK C LYS A 167 N MSE A 168 1555 1555 1.33 LINK C MSE A 168 N GLY A 169 1555 1555 1.34 LINK C ALA A 195 N MSE A 196 1555 1555 1.33 LINK C MSE A 196 N ASP A 197 1555 1555 1.33 LINK C LEU A 236 N MSE A 237 1555 1555 1.33 LINK C MSE A 237 N LYS A 238 1555 1555 1.32 LINK C GLY A 278 N MSE A 279 1555 1555 1.33 LINK C MSE A 279 N ASN A 280 1555 1555 1.34 LINK C GLU A 301 N MSE A 302 1555 1555 1.34 LINK C MSE A 302 N ALA A 303 1555 1555 1.33 CISPEP 1 ILE A 268 PRO A 269 0 1.42 CISPEP 2 THR A 289 PRO A 290 0 -3.88 CISPEP 3 ASN A 320 PRO A 321 0 -2.49 SITE 1 AC1 3 ASN A 152 MSE A 196 ARG A 199 CRYST1 70.024 96.058 99.976 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014281 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010410 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010002 0.00000