HEADER TRANSFERASE 11-FEB-09 3G88 TITLE T. THERMOPHILUS 16S RRNA G527 METHYLTRANSFERASE IN COMPLEX WITH ADOMET TITLE 2 IN SPACE GROUP P61 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE G; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 16S RRNA 7-METHYLGUANOSINE METHYLTRANSFERASE, 16S RRNA M7G COMPND 5 METHYLTRANSFERASE, GLUCOSE-INHIBITED DIVISION PROTEIN B; COMPND 6 EC: 2.1.1.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 300852; SOURCE 4 STRAIN: HB8; SOURCE 5 GENE: GIDB, RSMG, TTHA1971; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3)STAR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET26B KEYWDS METHYLTRANSFERASE, 16S RRNA METHYLTRANSFERASE, TRANSLATION, KEYWDS 2 CYTOPLASM, RRNA PROCESSING, S-ADENOSYL-L-METHIONINE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR H.DEMIRCI,R.BELARDINELLI,S.T.GREGORY,C.GUALERZI,A.E.DAHLBERG,G.JOGL REVDAT 4 24-JUL-19 3G88 1 REMARK LINK REVDAT 3 08-SEP-09 3G88 1 JRNL REVDAT 2 11-AUG-09 3G88 1 HET HETATM REVDAT 1 30-JUN-09 3G88 0 JRNL AUTH S.T.GREGORY,H.DEMIRCI,R.BELARDINELLI,T.MONSHUPANEE, JRNL AUTH 2 C.GUALERZI,A.E.DAHLBERG,G.JOGL JRNL TITL STRUCTURAL AND FUNCTIONAL STUDIES OF THE THERMUS JRNL TITL 2 THERMOPHILUS 16S RRNA METHYLTRANSFERASE RSMG JRNL REF RNA V. 15 1693 2009 JRNL REFN ISSN 1355-8382 JRNL PMID 19622680 JRNL DOI 10.1261/RNA.1652709 REMARK 2 REMARK 2 RESOLUTION. 1.87 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.87 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.38 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 47224 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 2386 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.3821 - 4.7969 0.99 2670 123 0.1781 0.1994 REMARK 3 2 4.7969 - 3.8122 1.00 2685 120 0.1390 0.1521 REMARK 3 3 3.8122 - 3.3317 1.00 2651 145 0.1500 0.1720 REMARK 3 4 3.3317 - 3.0277 1.00 2609 150 0.1693 0.1988 REMARK 3 5 3.0277 - 2.8110 1.00 2663 150 0.1752 0.2365 REMARK 3 6 2.8110 - 2.6455 1.00 2620 152 0.1679 0.1849 REMARK 3 7 2.6455 - 2.5131 1.00 2622 142 0.1604 0.2101 REMARK 3 8 2.5131 - 2.4038 1.00 2657 143 0.1699 0.2008 REMARK 3 9 2.4038 - 2.3114 1.00 2658 130 0.1615 0.2071 REMARK 3 10 2.3114 - 2.2317 1.00 2645 131 0.1654 0.2144 REMARK 3 11 2.2317 - 2.1619 1.00 2610 147 0.1540 0.1973 REMARK 3 12 2.1619 - 2.1002 1.00 2634 151 0.1677 0.1777 REMARK 3 13 2.1002 - 2.0449 1.00 2623 151 0.1666 0.2144 REMARK 3 14 2.0449 - 1.9950 1.00 2631 141 0.1869 0.2264 REMARK 3 15 1.9950 - 1.9497 1.00 2655 142 0.1892 0.2541 REMARK 3 16 1.9497 - 1.9082 0.99 2630 118 0.1917 0.1962 REMARK 3 17 1.9082 - 1.8700 0.98 2575 150 0.2449 0.3012 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 70.97 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.430 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.57 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.25600 REMARK 3 B22 (A**2) : 0.25600 REMARK 3 B33 (A**2) : -0.51300 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3831 REMARK 3 ANGLE : 1.483 5204 REMARK 3 CHIRALITY : 0.078 597 REMARK 3 PLANARITY : 0.007 668 REMARK 3 DIHEDRAL : 16.688 1493 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESSEQ 4:79 REMARK 3 ORIGIN FOR THE GROUP (A): -9.9987 31.6650 13.5554 REMARK 3 T TENSOR REMARK 3 T11: 0.1687 T22: 0.1551 REMARK 3 T33: 0.1816 T12: 0.0007 REMARK 3 T13: -0.0399 T23: -0.0091 REMARK 3 L TENSOR REMARK 3 L11: 0.7045 L22: 1.9165 REMARK 3 L33: 0.6836 L12: -0.3332 REMARK 3 L13: 0.2703 L23: -0.5084 REMARK 3 S TENSOR REMARK 3 S11: 0.0197 S12: -0.0459 S13: -0.0767 REMARK 3 S21: 0.0790 S22: 0.0030 S23: -0.2204 REMARK 3 S31: 0.0369 S32: -0.0376 S33: -0.0377 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESSEQ 80:132 REMARK 3 ORIGIN FOR THE GROUP (A): -10.2161 47.1750 13.9323 REMARK 3 T TENSOR REMARK 3 T11: 0.1546 T22: 0.1549 REMARK 3 T33: 0.1816 T12: -0.0160 REMARK 3 T13: -0.0354 T23: -0.0242 REMARK 3 L TENSOR REMARK 3 L11: 0.2212 L22: 0.9893 REMARK 3 L33: 0.3920 L12: -0.1371 REMARK 3 L13: 0.3188 L23: -0.1876 REMARK 3 S TENSOR REMARK 3 S11: -0.0757 S12: -0.0443 S13: 0.1254 REMARK 3 S21: 0.1718 S22: -0.0313 S23: -0.3050 REMARK 3 S31: -0.0672 S32: 0.0684 S33: 0.0676 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND RESSEQ 133:138 REMARK 3 ORIGIN FOR THE GROUP (A): -15.5820 55.7411 18.2516 REMARK 3 T TENSOR REMARK 3 T11: 0.2334 T22: 0.1576 REMARK 3 T33: 0.2157 T12: -0.0314 REMARK 3 T13: -0.0467 T23: -0.0282 REMARK 3 L TENSOR REMARK 3 L11: 2.4183 L22: 0.6174 REMARK 3 L33: 1.4553 L12: -1.0940 REMARK 3 L13: -0.3243 L23: -0.8781 REMARK 3 S TENSOR REMARK 3 S11: -0.4134 S12: -0.1157 S13: 0.5738 REMARK 3 S21: 0.3287 S22: 0.2998 S23: -0.1597 REMARK 3 S31: -0.2591 S32: 0.1101 S33: 0.0333 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND RESSEQ 139:190 REMARK 3 ORIGIN FOR THE GROUP (A): -24.2238 51.4760 7.2553 REMARK 3 T TENSOR REMARK 3 T11: 0.1803 T22: 0.1637 REMARK 3 T33: 0.1753 T12: -0.0150 REMARK 3 T13: -0.0174 T23: -0.0169 REMARK 3 L TENSOR REMARK 3 L11: 0.9065 L22: 0.6209 REMARK 3 L33: 0.5064 L12: -0.6391 REMARK 3 L13: 0.7137 L23: 0.1091 REMARK 3 S TENSOR REMARK 3 S11: 0.0225 S12: -0.0075 S13: 0.1671 REMARK 3 S21: -0.1446 S22: -0.0634 S23: 0.0226 REMARK 3 S31: -0.0677 S32: -0.1036 S33: 0.0379 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND RESSEQ 191:249 REMARK 3 ORIGIN FOR THE GROUP (A): -29.7168 48.5861 4.8055 REMARK 3 T TENSOR REMARK 3 T11: 0.1833 T22: 0.1502 REMARK 3 T33: 0.1399 T12: -0.0002 REMARK 3 T13: -0.0513 T23: -0.0022 REMARK 3 L TENSOR REMARK 3 L11: 2.0754 L22: 0.9206 REMARK 3 L33: 0.6829 L12: 0.5638 REMARK 3 L13: 0.3552 L23: -0.2990 REMARK 3 S TENSOR REMARK 3 S11: 0.0354 S12: 0.0504 S13: 0.1088 REMARK 3 S21: -0.1029 S22: -0.0875 S23: 0.1404 REMARK 3 S31: -0.0571 S32: -0.1044 S33: 0.0439 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN B AND RESSEQ 4:78 REMARK 3 ORIGIN FOR THE GROUP (A): -16.6405 43.0084 -20.7680 REMARK 3 T TENSOR REMARK 3 T11: 0.1726 T22: 0.1652 REMARK 3 T33: 0.1854 T12: 0.0042 REMARK 3 T13: 0.0312 T23: 0.0251 REMARK 3 L TENSOR REMARK 3 L11: 1.0534 L22: 0.9541 REMARK 3 L33: 0.7774 L12: -0.6315 REMARK 3 L13: 0.3011 L23: -0.6903 REMARK 3 S TENSOR REMARK 3 S11: 0.0221 S12: 0.0808 S13: 0.2134 REMARK 3 S21: -0.0399 S22: -0.0142 S23: -0.0481 REMARK 3 S31: 0.0112 S32: -0.0348 S33: -0.0162 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN B AND RESSEQ 79:101 REMARK 3 ORIGIN FOR THE GROUP (A): -5.5933 33.7803 -16.3659 REMARK 3 T TENSOR REMARK 3 T11: 0.1409 T22: 0.1638 REMARK 3 T33: 0.1783 T12: -0.0055 REMARK 3 T13: 0.0070 T23: -0.0133 REMARK 3 L TENSOR REMARK 3 L11: 0.5159 L22: 0.5966 REMARK 3 L33: 0.0108 L12: -0.1473 REMARK 3 L13: -0.0879 L23: -0.0799 REMARK 3 S TENSOR REMARK 3 S11: 0.0290 S12: -0.0239 S13: 0.1867 REMARK 3 S21: -0.0765 S22: 0.0123 S23: -0.2865 REMARK 3 S31: -0.0705 S32: 0.0524 S33: -0.0345 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN B AND RESSEQ 102:137 REMARK 3 ORIGIN FOR THE GROUP (A): -1.1240 34.7246 -23.8766 REMARK 3 T TENSOR REMARK 3 T11: 0.1467 T22: 0.1921 REMARK 3 T33: 0.1765 T12: -0.0089 REMARK 3 T13: 0.0442 T23: 0.0302 REMARK 3 L TENSOR REMARK 3 L11: 0.8136 L22: 0.7324 REMARK 3 L33: 0.3068 L12: -0.1965 REMARK 3 L13: -0.2312 L23: -0.2689 REMARK 3 S TENSOR REMARK 3 S11: 0.0627 S12: 0.1330 S13: 0.1599 REMARK 3 S21: -0.0861 S22: -0.1221 S23: -0.3247 REMARK 3 S31: 0.0013 S32: 0.2586 S33: 0.0668 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN B AND RESSEQ 138:144 REMARK 3 ORIGIN FOR THE GROUP (A): 1.5877 17.0478 -21.1692 REMARK 3 T TENSOR REMARK 3 T11: 0.1873 T22: 0.1938 REMARK 3 T33: 0.2709 T12: 0.0135 REMARK 3 T13: 0.0342 T23: 0.0072 REMARK 3 L TENSOR REMARK 3 L11: 0.9703 L22: 0.3589 REMARK 3 L33: 0.7072 L12: 0.7294 REMARK 3 L13: 0.4425 L23: 0.7380 REMARK 3 S TENSOR REMARK 3 S11: -0.0158 S12: 0.0969 S13: -0.1604 REMARK 3 S21: 0.0134 S22: -0.0465 S23: -0.0108 REMARK 3 S31: 0.2443 S32: -0.0333 S33: 0.0760 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN B AND RESSEQ 145:249 REMARK 3 ORIGIN FOR THE GROUP (A): -9.9715 19.0858 -12.6449 REMARK 3 T TENSOR REMARK 3 T11: 0.1393 T22: 0.1565 REMARK 3 T33: 0.1316 T12: -0.0014 REMARK 3 T13: 0.0203 T23: 0.0284 REMARK 3 L TENSOR REMARK 3 L11: 1.8710 L22: 2.1001 REMARK 3 L33: 1.0321 L12: 0.0286 REMARK 3 L13: -0.2305 L23: -0.4574 REMARK 3 S TENSOR REMARK 3 S11: -0.0699 S12: -0.0495 S13: -0.1693 REMARK 3 S21: 0.0563 S22: 0.0373 S23: 0.0152 REMARK 3 S31: 0.1172 S32: -0.0047 S33: 0.0364 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3G88 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-FEB-09. REMARK 100 THE DEPOSITION ID IS D_1000051546. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9797 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47411 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.870 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.87 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.20 REMARK 200 R MERGE FOR SHELL (I) : 0.48500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% (W/V) PEG1000, 100 MM IMIDAZOLE REMARK 280 (PH 8.0) AND 200 MM CALCIUM ACETATE, MICROBATCH TECHNIQUE UNDER REMARK 280 OIL, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.88833 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 111.77667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 83.83250 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 139.72083 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 27.94417 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 47 REMARK 465 GLY A 48 REMARK 465 LYS A 49 REMARK 465 VAL A 50 REMARK 465 ASN A 51 REMARK 465 LEU A 52 REMARK 465 THR A 53 REMARK 465 ALA A 54 REMARK 465 LEU A 55 REMARK 465 ARG A 56 REMARK 465 SER B 47 REMARK 465 GLY B 48 REMARK 465 LYS B 49 REMARK 465 VAL B 50 REMARK 465 ASN B 51 REMARK 465 LEU B 52 REMARK 465 THR B 53 REMARK 465 ALA B 54 REMARK 465 LEU B 55 REMARK 465 ARG B 56 REMARK 465 GLY B 57 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 189 O HOH B 671 1.95 REMARK 500 OE2 GLU B 20 O HOH B 433 1.98 REMARK 500 OE1 GLU A 227 O HOH A 674 1.99 REMARK 500 O HOH A 572 O HOH A 692 1.99 REMARK 500 O HOH B 622 O HOH B 640 2.03 REMARK 500 O HOH A 345 O HOH A 465 2.04 REMARK 500 O HOH B 470 O HOH B 693 2.04 REMARK 500 O HOH A 486 O HOH A 521 2.05 REMARK 500 O HOH B 617 O HOH B 658 2.05 REMARK 500 O HOH A 623 O HOH A 708 2.05 REMARK 500 O HOH A 451 O HOH A 678 2.06 REMARK 500 O HOH A 586 O HOH A 602 2.06 REMARK 500 O HOH B 670 O HOH B 709 2.06 REMARK 500 O HOH A 333 O HOH A 526 2.07 REMARK 500 O HOH A 600 O HOH A 608 2.07 REMARK 500 NE ARG A 133 O HOH A 662 2.07 REMARK 500 O HOH A 664 O HOH A 669 2.07 REMARK 500 OE1 GLU B 208 O HOH B 589 2.07 REMARK 500 O HOH B 350 O HOH B 684 2.09 REMARK 500 O4 PEG B 251 O HOH B 691 2.11 REMARK 500 O HOH A 538 O HOH A 615 2.12 REMARK 500 O HOH A 559 O HOH A 562 2.13 REMARK 500 O ALA A 46 O HOH A 527 2.14 REMARK 500 O HOH B 627 O HOH B 642 2.15 REMARK 500 O HOH B 436 O HOH B 616 2.15 REMARK 500 O HOH A 492 O HOH A 559 2.15 REMARK 500 O HOH A 575 O HOH A 657 2.16 REMARK 500 N GLU B 58 O HOH B 626 2.16 REMARK 500 O HOH B 624 O HOH B 673 2.16 REMARK 500 O HOH A 518 O HOH A 711 2.16 REMARK 500 O HOH A 592 O HOH A 679 2.16 REMARK 500 O HOH B 546 O HOH B 670 2.16 REMARK 500 O HOH B 476 O HOH B 497 2.16 REMARK 500 O HOH B 421 O HOH B 436 2.17 REMARK 500 OE1 GLU B 125 O HOH B 327 2.17 REMARK 500 O HOH A 629 O HOH A 681 2.18 REMARK 500 O HOH A 668 O HOH B 570 2.18 REMARK 500 O HOH A 432 O HOH A 536 2.19 REMARK 500 OE2 GLU A 200 O HOH A 582 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 635 O HOH B 640 6555 1.95 REMARK 500 O HOH A 308 O HOH B 551 6665 2.08 REMARK 500 O HOH A 447 O HOH B 641 2665 2.10 REMARK 500 CD ARG B 38 O HOH A 678 3564 2.14 REMARK 500 O HOH A 364 O HOH B 359 6665 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE A 2 CB - CG - CD1 ANGL. DEV. = -4.8 DEGREES REMARK 500 PHE B 2 CB - CG - CD1 ANGL. DEV. = -5.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAM A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 250 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAM B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 250 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 251 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3G89 RELATED DB: PDB REMARK 900 RELATED ID: 3G8A RELATED DB: PDB REMARK 900 RELATED ID: 3G8B RELATED DB: PDB DBREF 3G88 A 1 249 UNP Q9LCY2 RSMG_THET8 1 249 DBREF 3G88 B 1 249 UNP Q9LCY2 RSMG_THET8 1 249 SEQRES 1 A 249 MET PHE HIC GLY LYS HIS PRO GLY GLY LEU SER GLU ARG SEQRES 2 A 249 GLY ARG ALA LEU LEU LEU GLU GLY GLY LYS ALA LEU GLY SEQRES 3 A 249 LEU ASP LEU LYS PRO HIS LEU GLU ALA PHE SER ARG LEU SEQRES 4 A 249 TYR ALA LEU LEU GLN GLU ALA SER GLY LYS VAL ASN LEU SEQRES 5 A 249 THR ALA LEU ARG GLY GLU GLU GLU VAL VAL VAL LYS HIS SEQRES 6 A 249 PHE LEU ASP SER LEU THR LEU LEU ARG LEU PRO LEU TRP SEQRES 7 A 249 GLN GLY PRO LEU ARG VAL LEU ASP LEU GLY THR GLY ALA SEQRES 8 A 249 GLY PHE PRO GLY LEU PRO LEU LYS ILE VAL ARG PRO GLU SEQRES 9 A 249 LEU GLU LEU VAL LEU VAL ASP ALA THR ARG LYS LYS VAL SEQRES 10 A 249 ALA PHE VAL GLU ARG ALA ILE GLU VAL LEU GLY LEU LYS SEQRES 11 A 249 GLY ALA ARG ALA LEU TRP GLY ARG ALA GLU VAL LEU ALA SEQRES 12 A 249 ARG GLU ALA GLY HIS ARG GLU ALA TYR ALA ARG ALA VAL SEQRES 13 A 249 ALA ARG ALA VAL ALA PRO LEU CYS VAL LEU SER GLU LEU SEQRES 14 A 249 LEU LEU PRO PHE LEU GLU VAL GLY GLY ALA ALA VAL ALA SEQRES 15 A 249 MET LYS GLY PRO ARG VAL GLU GLU GLU LEU ALA PRO LEU SEQRES 16 A 249 PRO PRO ALA LEU GLU ARG LEU GLY GLY ARG LEU GLY GLU SEQRES 17 A 249 VAL LEU ALA LEU GLN LEU PRO LEU SER GLY GLU ALA ARG SEQRES 18 A 249 HIS LEU VAL VAL LEU GLU LYS THR ALA PRO THR PRO PRO SEQRES 19 A 249 ALA TYR PRO ARG ARG PRO GLY VAL PRO GLU ARG HIS PRO SEQRES 20 A 249 LEU CYS SEQRES 1 B 249 MET PHE HIC GLY LYS HIS PRO GLY GLY LEU SER GLU ARG SEQRES 2 B 249 GLY ARG ALA LEU LEU LEU GLU GLY GLY LYS ALA LEU GLY SEQRES 3 B 249 LEU ASP LEU LYS PRO HIS LEU GLU ALA PHE SER ARG LEU SEQRES 4 B 249 TYR ALA LEU LEU GLN GLU ALA SER GLY LYS VAL ASN LEU SEQRES 5 B 249 THR ALA LEU ARG GLY GLU GLU GLU VAL VAL VAL LYS HIS SEQRES 6 B 249 PHE LEU ASP SER LEU THR LEU LEU ARG LEU PRO LEU TRP SEQRES 7 B 249 GLN GLY PRO LEU ARG VAL LEU ASP LEU GLY THR GLY ALA SEQRES 8 B 249 GLY PHE PRO GLY LEU PRO LEU LYS ILE VAL ARG PRO GLU SEQRES 9 B 249 LEU GLU LEU VAL LEU VAL ASP ALA THR ARG LYS LYS VAL SEQRES 10 B 249 ALA PHE VAL GLU ARG ALA ILE GLU VAL LEU GLY LEU LYS SEQRES 11 B 249 GLY ALA ARG ALA LEU TRP GLY ARG ALA GLU VAL LEU ALA SEQRES 12 B 249 ARG GLU ALA GLY HIS ARG GLU ALA TYR ALA ARG ALA VAL SEQRES 13 B 249 ALA ARG ALA VAL ALA PRO LEU CYS VAL LEU SER GLU LEU SEQRES 14 B 249 LEU LEU PRO PHE LEU GLU VAL GLY GLY ALA ALA VAL ALA SEQRES 15 B 249 MET LYS GLY PRO ARG VAL GLU GLU GLU LEU ALA PRO LEU SEQRES 16 B 249 PRO PRO ALA LEU GLU ARG LEU GLY GLY ARG LEU GLY GLU SEQRES 17 B 249 VAL LEU ALA LEU GLN LEU PRO LEU SER GLY GLU ALA ARG SEQRES 18 B 249 HIS LEU VAL VAL LEU GLU LYS THR ALA PRO THR PRO PRO SEQRES 19 B 249 ALA TYR PRO ARG ARG PRO GLY VAL PRO GLU ARG HIS PRO SEQRES 20 B 249 LEU CYS MODRES 3G88 HIC A 3 HIS 4-METHYL-HISTIDINE MODRES 3G88 HIC B 3 HIS 4-METHYL-HISTIDINE HET HIC A 3 11 HET HIC B 3 11 HET SAM A 303 27 HET PEG A 250 7 HET SAM B 303 27 HET PEG B 250 7 HET PEG B 251 7 HETNAM HIC 4-METHYL-HISTIDINE HETNAM SAM S-ADENOSYLMETHIONINE HETNAM PEG DI(HYDROXYETHYL)ETHER FORMUL 1 HIC 2(C7 H11 N3 O2) FORMUL 3 SAM 2(C15 H22 N6 O5 S) FORMUL 4 PEG 3(C4 H10 O3) FORMUL 8 HOH *713(H2 O) HELIX 1 1 SER A 11 LEU A 25 1 15 HELIX 2 2 LEU A 29 PRO A 31 5 3 HELIX 3 3 HIS A 32 ALA A 46 1 15 HELIX 4 4 GLY A 57 THR A 71 1 15 HELIX 5 5 LEU A 72 LEU A 75 5 4 HELIX 6 6 PRO A 94 ARG A 102 1 9 HELIX 7 7 THR A 113 GLY A 128 1 16 HELIX 8 8 ARG A 138 ALA A 143 1 6 HELIX 9 9 PRO A 162 LEU A 171 1 10 HELIX 10 10 VAL A 188 ALA A 193 1 6 HELIX 11 11 PRO A 194 LEU A 202 1 9 HELIX 12 12 GLY A 241 HIS A 246 1 6 HELIX 13 13 SER B 11 LEU B 25 1 15 HELIX 14 14 LEU B 29 PRO B 31 5 3 HELIX 15 15 HIS B 32 ALA B 46 1 15 HELIX 16 16 GLU B 58 THR B 71 1 14 HELIX 17 17 LEU B 72 LEU B 75 5 4 HELIX 18 18 PRO B 94 ARG B 102 1 9 HELIX 19 19 THR B 113 GLY B 128 1 16 HELIX 20 20 ARG B 138 ALA B 143 1 6 HELIX 21 21 PRO B 162 LEU B 171 1 10 HELIX 22 22 VAL B 188 ALA B 193 1 6 HELIX 23 23 PRO B 194 LEU B 202 1 9 HELIX 24 24 GLY B 241 HIS B 246 1 6 SHEET 1 A 7 ALA A 132 TRP A 136 0 SHEET 2 A 7 GLU A 106 ASP A 111 1 N LEU A 109 O LEU A 135 SHEET 3 A 7 ARG A 83 LEU A 87 1 N VAL A 84 O GLU A 106 SHEET 4 A 7 TYR A 152 ARG A 158 1 O VAL A 156 N LEU A 85 SHEET 5 A 7 LEU A 174 LYS A 184 1 O GLU A 175 N TYR A 152 SHEET 6 A 7 ALA A 220 LYS A 228 -1 O LYS A 228 N GLY A 177 SHEET 7 A 7 GLY A 204 GLN A 213 -1 N GLY A 207 O VAL A 225 SHEET 1 B 7 ALA B 132 TRP B 136 0 SHEET 2 B 7 GLU B 106 ASP B 111 1 N LEU B 109 O LEU B 135 SHEET 3 B 7 ARG B 83 LEU B 87 1 N VAL B 84 O GLU B 106 SHEET 4 B 7 TYR B 152 ARG B 158 1 O VAL B 156 N LEU B 85 SHEET 5 B 7 LEU B 174 LYS B 184 1 O VAL B 181 N ALA B 155 SHEET 6 B 7 ALA B 220 LYS B 228 -1 O LYS B 228 N GLY B 177 SHEET 7 B 7 GLY B 204 GLN B 213 -1 N GLY B 207 O VAL B 225 SSBOND 1 CYS A 164 CYS A 249 1555 1555 2.03 SSBOND 2 CYS B 164 CYS B 249 1555 1555 2.03 LINK C PHE A 2 N HIC A 3 1555 1555 1.33 LINK C HIC A 3 N GLY A 4 1555 1555 1.33 LINK C PHE B 2 N HIC B 3 1555 1555 1.33 LINK C HIC B 3 N GLY B 4 1555 1555 1.33 LINK CZ HIC A 3 N MET A 1 1555 1555 1.49 LINK CZ HIC B 3 N MET B 1 1555 1555 1.49 CISPEP 1 PHE A 93 PRO A 94 0 5.73 CISPEP 2 TYR A 236 PRO A 237 0 -0.95 CISPEP 3 PHE B 93 PRO B 94 0 5.67 CISPEP 4 TYR B 236 PRO B 237 0 0.10 SITE 1 AC1 17 GLY A 88 THR A 89 PHE A 93 ASP A 111 SITE 2 AC1 17 ALA A 112 THR A 113 GLY A 137 ARG A 138 SITE 3 AC1 17 ALA A 139 GLU A 140 ARG A 158 ALA A 159 SITE 4 AC1 17 HOH A 252 HOH A 272 HOH A 282 HOH A 458 SITE 5 AC1 17 HOH A 620 SITE 1 AC2 6 ALA A 112 TRP A 136 ARG A 138 PRO A 196 SITE 2 AC2 6 HOH A 355 HOH A 481 SITE 1 AC3 18 GLY B 88 THR B 89 PHE B 93 ASP B 111 SITE 2 AC3 18 ALA B 112 THR B 113 GLY B 137 ARG B 138 SITE 3 AC3 18 ALA B 139 GLU B 140 ARG B 158 ALA B 159 SITE 4 AC3 18 HOH B 253 HOH B 264 HOH B 331 HOH B 408 SITE 5 AC3 18 HOH B 437 HOH B 447 SITE 1 AC4 7 ALA B 112 TRP B 136 GLY B 137 ARG B 138 SITE 2 AC4 7 PRO B 196 HOH B 348 HOH B 419 SITE 1 AC5 6 ALA B 91 LYS B 115 LYS B 116 HOH B 613 SITE 2 AC5 6 HOH B 683 HOH B 691 CRYST1 77.847 77.847 167.665 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012846 0.007416 0.000000 0.00000 SCALE2 0.000000 0.014833 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005964 0.00000