data_3G9M # _entry.id 3G9M # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3G9M pdb_00003g9m 10.2210/pdb3g9m/pdb NDB PD1243 ? ? RCSB RCSB051596 ? ? WWPDB D_1000051596 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3FYL 'Same protein, different DNA' unspecified PDB 3G6P 'Same complex, different crystal condition' unspecified PDB 3G6Q 'Same DNA binding site, insertion mutation GR gamma' unspecified PDB 3G6R . unspecified PDB 3G6T . unspecified PDB 3G6U . unspecified PDB 3G8U . unspecified PDB 3G8X . unspecified PDB 3G97 . unspecified PDB 3G99 . unspecified PDB 3G9I . unspecified PDB 3G9J . unspecified PDB 3G9O . unspecified PDB 3G9P . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3G9M _pdbx_database_status.recvd_initial_deposition_date 2009-02-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pufall, M.A.' 1 'Yamamoto, K.R.' 2 'Meijsing, S.H.' 3 # _citation.id primary _citation.title 'DNA binding site sequence directs glucocorticoid receptor structure and activity.' _citation.journal_abbrev Science _citation.journal_volume 324 _citation.page_first 407 _citation.page_last 410 _citation.year 2009 _citation.journal_id_ASTM SCIEAS _citation.country US _citation.journal_id_ISSN 0036-8075 _citation.journal_id_CSD 0038 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19372434 _citation.pdbx_database_id_DOI 10.1126/science.1164265 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Meijsing, S.H.' 1 ? primary 'Pufall, M.A.' 2 ? primary 'So, A.Y.' 3 ? primary 'Bates, D.L.' 4 ? primary 'Chen, L.' 5 ? primary 'Yamamoto, K.R.' 6 ? # _cell.entry_id 3G9M _cell.length_a 118.058 _cell.length_b 38.713 _cell.length_c 96.475 _cell.angle_alpha 90.00 _cell.angle_beta 123.71 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3G9M _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Glucocorticoid receptor' 9962.758 2 ? ? 'UNP residues 440-525' ? 2 polymer syn ;DNA (5'-D(*TP*CP*GP*GP*AP*CP*AP*AP*AP*AP*TP*GP*TP*TP*CP*T)-3') ; 4897.203 1 ? ? ? 'GR binding site: Sgk 16 base bottom strand' 3 polymer syn ;DNA (5'-D(*AP*AP*GP*AP*AP*CP*AP*TP*TP*TP*TP*GP*TP*CP*CP*G)-3') ; 4897.203 1 ? ? ? 'GR binding site: Sgk 16 base top strand' 4 non-polymer syn 'ZINC ION' 65.409 4 ? ? ? ? 5 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 6 water nat water 18.015 254 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'GR, Nuclear receptor subfamily 3 group C member 1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSHMCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKK IKGIQQATAG ; ;GSHMCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKK IKGIQQATAG ; A,B ? 2 polydeoxyribonucleotide no no '(DT)(DC)(DG)(DG)(DA)(DC)(DA)(DA)(DA)(DA)(DT)(DG)(DT)(DT)(DC)(DT)' TCGGACAAAATGTTCT D ? 3 polydeoxyribonucleotide no no '(DA)(DA)(DG)(DA)(DA)(DC)(DA)(DT)(DT)(DT)(DT)(DG)(DT)(DC)(DC)(DG)' AAGAACATTTTGTCCG C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 CYS n 1 6 LEU n 1 7 VAL n 1 8 CYS n 1 9 SER n 1 10 ASP n 1 11 GLU n 1 12 ALA n 1 13 SER n 1 14 GLY n 1 15 CYS n 1 16 HIS n 1 17 TYR n 1 18 GLY n 1 19 VAL n 1 20 LEU n 1 21 THR n 1 22 CYS n 1 23 GLY n 1 24 SER n 1 25 CYS n 1 26 LYS n 1 27 VAL n 1 28 PHE n 1 29 PHE n 1 30 LYS n 1 31 ARG n 1 32 ALA n 1 33 VAL n 1 34 GLU n 1 35 GLY n 1 36 GLN n 1 37 HIS n 1 38 ASN n 1 39 TYR n 1 40 LEU n 1 41 CYS n 1 42 ALA n 1 43 GLY n 1 44 ARG n 1 45 ASN n 1 46 ASP n 1 47 CYS n 1 48 ILE n 1 49 ILE n 1 50 ASP n 1 51 LYS n 1 52 ILE n 1 53 ARG n 1 54 ARG n 1 55 LYS n 1 56 ASN n 1 57 CYS n 1 58 PRO n 1 59 ALA n 1 60 CYS n 1 61 ARG n 1 62 TYR n 1 63 ARG n 1 64 LYS n 1 65 CYS n 1 66 LEU n 1 67 GLN n 1 68 ALA n 1 69 GLY n 1 70 MET n 1 71 ASN n 1 72 LEU n 1 73 GLU n 1 74 ALA n 1 75 ARG n 1 76 LYS n 1 77 THR n 1 78 LYS n 1 79 LYS n 1 80 LYS n 1 81 ILE n 1 82 LYS n 1 83 GLY n 1 84 ILE n 1 85 GLN n 1 86 GLN n 1 87 ALA n 1 88 THR n 1 89 ALA n 1 90 GLY n 2 1 DT n 2 2 DC n 2 3 DG n 2 4 DG n 2 5 DA n 2 6 DC n 2 7 DA n 2 8 DA n 2 9 DA n 2 10 DA n 2 11 DT n 2 12 DG n 2 13 DT n 2 14 DT n 2 15 DC n 2 16 DT n 3 1 DA n 3 2 DA n 3 3 DG n 3 4 DA n 3 5 DA n 3 6 DC n 3 7 DA n 3 8 DT n 3 9 DT n 3 10 DT n 3 11 DT n 3 12 DG n 3 13 DT n 3 14 DC n 3 15 DC n 3 16 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'brown rat,rat,rats' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Nr3c1, Grl' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Rattus norvegicus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10116 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) Gold' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP GCR_RAT P06536 1 ;CLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGI QQATAG ; 440 ? 2 PDB 3G9M 3G9M 3 AAGAACATTTTGTCCG ? ? 3 PDB 3G9M 3G9M 2 TCGGACAAAATGTTCT ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3G9M A 5 ? 90 ? P06536 440 ? 525 ? 440 525 2 1 3G9M B 5 ? 90 ? P06536 440 ? 525 ? 440 525 3 2 3G9M C 1 ? 16 ? 3G9M 1 ? 16 ? 1 16 4 3 3G9M D 1 ? 16 ? 3G9M 1 ? 16 ? 1 16 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3G9M GLY A 1 ? UNP P06536 ? ? 'expression tag' 436 1 1 3G9M SER A 2 ? UNP P06536 ? ? 'expression tag' 437 2 1 3G9M HIS A 3 ? UNP P06536 ? ? 'expression tag' 438 3 1 3G9M MET A 4 ? UNP P06536 ? ? 'expression tag' 439 4 2 3G9M GLY B 1 ? UNP P06536 ? ? 'expression tag' 436 5 2 3G9M SER B 2 ? UNP P06536 ? ? 'expression tag' 437 6 2 3G9M HIS B 3 ? UNP P06536 ? ? 'expression tag' 438 7 2 3G9M MET B 4 ? UNP P06536 ? ? 'expression tag' 439 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 3G9M _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.09 _exptl_crystal.density_percent_sol 60.13 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '50mM Tris, pH 7.5, 200mM KCl, 50mM MgCl2, 10% PEG4000, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 Tris ? ? ? 1 2 1 KCl ? ? ? 1 3 1 MgCl2 ? ? ? 1 4 2 Tris ? ? ? 1 5 2 KCl ? ? ? 1 6 2 MgCl2 ? ? ? 1 7 2 PEG4000 ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2006-04-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double flat crystal, Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.2.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.2.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 # _reflns.entry_id 3G9M _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 1.61 _reflns.number_obs 42461 _reflns.number_all ? _reflns.percent_possible_obs 90.4 _reflns.pdbx_Rmerge_I_obs 0.059 _reflns.pdbx_Rsym_value 0.044 _reflns.pdbx_netI_over_sigmaI 18.7 _reflns.B_iso_Wilson_estimate 21.16 _reflns.pdbx_redundancy 4.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.61 _reflns_shell.d_res_low 1.67 _reflns_shell.percent_possible_all 55.8 _reflns_shell.Rmerge_I_obs 0.567 _reflns_shell.pdbx_Rsym_value 0.374 _reflns_shell.meanI_over_sigI_obs 1.6 _reflns_shell.pdbx_redundancy 3.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2595 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3G9M _refine.ls_number_reflns_obs 37875 _refine.ls_number_reflns_all 42461 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.21 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.613 _refine.ls_d_res_high 1.61 _refine.ls_percent_reflns_obs 80.49 _refine.ls_R_factor_obs 0.1875 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1869 _refine.ls_R_factor_R_free 0.1992 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.65 _refine.ls_number_reflns_R_free 1760 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 44.8 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.396 _refine.solvent_model_param_bsol 71.345 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 1GLU _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 1.56 _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1244 _refine_hist.pdbx_number_atoms_nucleic_acid 650 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 254 _refine_hist.number_atoms_total 2160 _refine_hist.d_res_high 1.61 _refine_hist.d_res_low 30.613 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_angle_d 1.328 ? ? ? 'X-RAY DIFFRACTION' ? f_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.61 1.6723 1925 0.2657 43.00 0.3015 . . 93 . . 1925 . 'X-RAY DIFFRACTION' . 1.6723 1.7392 2722 0.2318 61.00 0.2509 . . 136 . . 2722 . 'X-RAY DIFFRACTION' . 1.7392 1.8184 3257 0.2158 73.00 0.1966 . . 155 . . 3257 . 'X-RAY DIFFRACTION' . 1.8184 1.9142 3288 0.2482 74.00 0.2642 . . 162 . . 3288 . 'X-RAY DIFFRACTION' . 1.9142 2.0341 3843 0.2416 86.00 0.2546 . . 184 . . 3843 . 'X-RAY DIFFRACTION' . 2.0341 2.1912 4130 0.1917 93.00 0.2117 . . 201 . . 4130 . 'X-RAY DIFFRACTION' . 2.1912 2.4116 3977 0.2002 89.00 0.2490 . . 195 . . 3977 . 'X-RAY DIFFRACTION' . 2.4116 2.7603 4426 0.1673 98.00 0.1924 . . 213 . . 4426 . 'X-RAY DIFFRACTION' . 2.7603 3.4770 4437 0.1750 98.00 0.2173 . . 217 . . 4437 . 'X-RAY DIFFRACTION' . 3.4770 30.6189 4110 0.1655 89.00 0.1529 . . 204 . . 4110 . 'X-RAY DIFFRACTION' # _struct.entry_id 3G9M _struct.title 'GR DNA-binding domain:Sgk 16bp complex-44' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3G9M _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text ;glucocorticoid, DNA-binding, allostery, lever arm, transcription, hormone, Alternative initiation, Chromatin regulator, Cytoplasm, Lipid-binding, Metal-binding, Nucleus, Phosphoprotein, Polymorphism, Receptor, Steroid-binding, Transcription regulation, Ubl conjugation, Zinc, Zinc-finger, TRANSCRIPTION-DNA COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 5 ? I N N 4 ? J N N 4 ? K N N 6 ? L N N 6 ? M N N 6 ? N N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 CYS A 22 ? GLY A 35 ? CYS A 457 GLY A 470 1 ? 14 HELX_P HELX_P2 2 ILE A 52 ? ASN A 56 ? ILE A 487 ASN A 491 5 ? 5 HELX_P HELX_P3 3 CYS A 57 ? GLY A 69 ? CYS A 492 GLY A 504 1 ? 13 HELX_P HELX_P4 4 GLU A 73 ? LYS A 79 ? GLU A 508 LYS A 514 1 ? 7 HELX_P HELX_P5 5 CYS B 22 ? GLN B 36 ? CYS B 457 GLN B 471 1 ? 15 HELX_P HELX_P6 6 ILE B 52 ? ASN B 56 ? ILE B 487 ASN B 491 5 ? 5 HELX_P HELX_P7 7 CYS B 57 ? ALA B 68 ? CYS B 492 ALA B 503 1 ? 12 HELX_P HELX_P8 8 GLU B 73 ? LYS B 80 ? GLU B 508 LYS B 515 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 5 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 440 A ZN 526 1_555 ? ? ? ? ? ? ? 2.317 ? ? metalc2 metalc ? ? A CYS 8 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 443 A ZN 526 1_555 ? ? ? ? ? ? ? 2.310 ? ? metalc3 metalc ? ? A CYS 22 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 457 A ZN 526 1_555 ? ? ? ? ? ? ? 2.329 ? ? metalc4 metalc ? ? A CYS 25 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 460 A ZN 526 1_555 ? ? ? ? ? ? ? 2.291 ? ? metalc5 metalc ? ? A CYS 41 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 476 A ZN 527 1_555 ? ? ? ? ? ? ? 2.360 ? ? metalc6 metalc ? ? A CYS 47 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 482 A ZN 527 1_555 ? ? ? ? ? ? ? 2.255 ? ? metalc7 metalc ? ? A CYS 57 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 492 A ZN 527 1_555 ? ? ? ? ? ? ? 2.336 ? ? metalc8 metalc ? ? A CYS 60 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 495 A ZN 527 1_555 ? ? ? ? ? ? ? 2.350 ? ? metalc9 metalc ? ? B CYS 5 SG ? ? ? 1_555 I ZN . ZN ? ? B CYS 440 B ZN 526 1_555 ? ? ? ? ? ? ? 2.406 ? ? metalc10 metalc ? ? B CYS 8 SG ? ? ? 1_555 I ZN . ZN ? ? B CYS 443 B ZN 526 1_555 ? ? ? ? ? ? ? 2.250 ? ? metalc11 metalc ? ? B CYS 22 SG ? ? ? 1_555 I ZN . ZN ? ? B CYS 457 B ZN 526 1_555 ? ? ? ? ? ? ? 2.422 ? ? metalc12 metalc ? ? B CYS 25 SG ? ? ? 1_555 I ZN . ZN ? ? B CYS 460 B ZN 526 1_555 ? ? ? ? ? ? ? 2.314 ? ? metalc13 metalc ? ? B CYS 41 SG ? ? ? 1_555 J ZN . ZN ? ? B CYS 476 B ZN 527 1_555 ? ? ? ? ? ? ? 2.342 ? ? metalc14 metalc ? ? B CYS 47 SG ? ? ? 1_555 J ZN . ZN ? ? B CYS 482 B ZN 527 1_555 ? ? ? ? ? ? ? 2.273 ? ? metalc15 metalc ? ? B CYS 57 SG ? ? ? 1_555 J ZN . ZN ? ? B CYS 492 B ZN 527 1_555 ? ? ? ? ? ? ? 2.356 ? ? metalc16 metalc ? ? B CYS 60 SG ? ? ? 1_555 J ZN . ZN ? ? B CYS 495 B ZN 527 1_555 ? ? ? ? ? ? ? 2.364 ? ? hydrog1 hydrog ? ? C DC 2 N3 ? ? ? 1_555 D DG 16 N1 ? ? D DC 2 C DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 16 O6 ? ? D DC 2 C DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DC 2 O2 ? ? ? 1_555 D DG 16 N2 ? ? D DC 2 C DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DG 3 N1 ? ? ? 1_555 D DC 15 N3 ? ? D DG 3 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DG 3 N2 ? ? ? 1_555 D DC 15 O2 ? ? D DG 3 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DG 3 O6 ? ? ? 1_555 D DC 15 N4 ? ? D DG 3 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DG 4 N1 ? ? ? 1_555 D DC 14 N3 ? ? D DG 4 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DG 4 N2 ? ? ? 1_555 D DC 14 O2 ? ? D DG 4 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DG 4 O6 ? ? ? 1_555 D DC 14 N4 ? ? D DG 4 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DA 5 N1 ? ? ? 1_555 D DT 13 N3 ? ? D DA 5 C DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DT 13 O4 ? ? D DA 5 C DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DC 6 N3 ? ? ? 1_555 D DG 12 N1 ? ? D DC 6 C DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DC 6 N4 ? ? ? 1_555 D DG 12 O6 ? ? D DC 6 C DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DC 6 O2 ? ? ? 1_555 D DG 12 N2 ? ? D DC 6 C DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DA 7 N1 ? ? ? 1_555 D DT 11 N3 ? ? D DA 7 C DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DA 7 N6 ? ? ? 1_555 D DT 11 O4 ? ? D DA 7 C DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DA 8 N1 ? ? ? 1_555 D DT 10 N3 ? ? D DA 8 C DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DA 8 N6 ? ? ? 1_555 D DT 10 O4 ? ? D DA 8 C DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DA 9 N1 ? ? ? 1_555 D DT 9 N3 ? ? D DA 9 C DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DA 9 N6 ? ? ? 1_555 D DT 9 O4 ? ? D DA 9 C DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DA 10 N1 ? ? ? 1_555 D DT 8 N3 ? ? D DA 10 C DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DA 10 N6 ? ? ? 1_555 D DT 8 O4 ? ? D DA 10 C DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DT 11 N3 ? ? ? 1_555 D DA 7 N1 ? ? D DT 11 C DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DT 11 O4 ? ? ? 1_555 D DA 7 N6 ? ? D DT 11 C DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DG 12 N1 ? ? ? 1_555 D DC 6 N3 ? ? D DG 12 C DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DG 12 N2 ? ? ? 1_555 D DC 6 O2 ? ? D DG 12 C DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DG 12 O6 ? ? ? 1_555 D DC 6 N4 ? ? D DG 12 C DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DT 13 N3 ? ? ? 1_555 D DA 5 N1 ? ? D DT 13 C DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DT 13 O4 ? ? ? 1_555 D DA 5 N6 ? ? D DT 13 C DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DT 14 N3 ? ? ? 1_555 D DA 4 N1 ? ? D DT 14 C DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DT 14 O4 ? ? ? 1_555 D DA 4 N6 ? ? D DT 14 C DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DC 15 N3 ? ? ? 1_555 D DG 3 N1 ? ? D DC 15 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DC 15 N4 ? ? ? 1_555 D DG 3 O6 ? ? D DC 15 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DC 15 O2 ? ? ? 1_555 D DG 3 N2 ? ? D DC 15 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? D DA 1 N1 ? ? ? 1_555 D DA 2 N6 ? ? C DA 1 C DA 2 2_656 ? ? ? ? ? ? 'DA-DA MISPAIR' ? ? ? hydrog36 hydrog ? ? D DA 2 N6 ? ? ? 1_555 D DA 1 N1 ? ? C DA 2 C DA 1 2_656 ? ? ? ? ? ? 'DA-DA MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 14 ? HIS A 16 ? GLY A 449 HIS A 451 A 2 VAL A 19 ? THR A 21 ? VAL A 454 THR A 456 B 1 GLY B 14 ? HIS B 16 ? GLY B 449 HIS B 451 B 2 VAL B 19 ? THR B 21 ? VAL B 454 THR B 456 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLY A 14 ? N GLY A 449 O THR A 21 ? O THR A 456 B 1 2 N HIS B 16 ? N HIS B 451 O VAL B 19 ? O VAL B 454 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 526 ? 4 'BINDING SITE FOR RESIDUE ZN A 526' AC2 Software A ZN 527 ? 4 'BINDING SITE FOR RESIDUE ZN A 527' AC3 Software A EDO 1 ? 8 'BINDING SITE FOR RESIDUE EDO A 1' AC4 Software A EDO 528 ? 9 'BINDING SITE FOR RESIDUE EDO A 528' AC5 Software B ZN 526 ? 4 'BINDING SITE FOR RESIDUE ZN B 526' AC6 Software B ZN 527 ? 4 'BINDING SITE FOR RESIDUE ZN B 527' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 5 ? CYS A 440 . ? 1_555 ? 2 AC1 4 CYS A 8 ? CYS A 443 . ? 1_555 ? 3 AC1 4 CYS A 22 ? CYS A 457 . ? 1_555 ? 4 AC1 4 CYS A 25 ? CYS A 460 . ? 1_555 ? 5 AC2 4 CYS A 41 ? CYS A 476 . ? 1_555 ? 6 AC2 4 CYS A 47 ? CYS A 482 . ? 1_555 ? 7 AC2 4 CYS A 57 ? CYS A 492 . ? 1_555 ? 8 AC2 4 CYS A 60 ? CYS A 495 . ? 1_555 ? 9 AC3 8 CYS A 41 ? CYS A 476 . ? 1_555 ? 10 AC3 8 ALA A 42 ? ALA A 477 . ? 1_555 ? 11 AC3 8 GLY A 43 ? GLY A 478 . ? 1_555 ? 12 AC3 8 CYS A 47 ? CYS A 482 . ? 1_555 ? 13 AC3 8 CYS A 57 ? CYS A 492 . ? 1_555 ? 14 AC3 8 HOH K . ? HOH A 529 . ? 1_555 ? 15 AC3 8 CYS B 47 ? CYS B 482 . ? 1_555 ? 16 AC3 8 ASN B 56 ? ASN B 491 . ? 1_555 ? 17 AC4 9 HOH K . ? HOH A 128 . ? 1_555 ? 18 AC4 9 HOH K . ? HOH A 220 . ? 1_555 ? 19 AC4 9 LYS A 55 ? LYS A 490 . ? 1_555 ? 20 AC4 9 ASN A 56 ? ASN A 491 . ? 1_555 ? 21 AC4 9 PRO A 58 ? PRO A 493 . ? 1_555 ? 22 AC4 9 LYS B 55 ? LYS B 490 . ? 1_555 ? 23 AC4 9 ASN B 56 ? ASN B 491 . ? 1_555 ? 24 AC4 9 DA C 10 ? DA D 10 . ? 1_555 ? 25 AC4 9 DT C 11 ? DT D 11 . ? 1_555 ? 26 AC5 4 CYS B 5 ? CYS B 440 . ? 1_555 ? 27 AC5 4 CYS B 8 ? CYS B 443 . ? 1_555 ? 28 AC5 4 CYS B 22 ? CYS B 457 . ? 1_555 ? 29 AC5 4 CYS B 25 ? CYS B 460 . ? 1_555 ? 30 AC6 4 CYS B 41 ? CYS B 476 . ? 1_555 ? 31 AC6 4 CYS B 47 ? CYS B 482 . ? 1_555 ? 32 AC6 4 CYS B 57 ? CYS B 492 . ? 1_555 ? 33 AC6 4 CYS B 60 ? CYS B 495 . ? 1_555 ? # _database_PDB_matrix.entry_id 3G9M _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3G9M _atom_sites.fract_transf_matrix[1][1] 0.008470 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005651 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025831 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012461 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 436 ? ? ? A . n A 1 2 SER 2 437 437 SER SER A . n A 1 3 HIS 3 438 438 HIS HIS A . n A 1 4 MET 4 439 439 MET MET A . n A 1 5 CYS 5 440 440 CYS CYS A . n A 1 6 LEU 6 441 441 LEU LEU A . n A 1 7 VAL 7 442 442 VAL VAL A . n A 1 8 CYS 8 443 443 CYS CYS A . n A 1 9 SER 9 444 444 SER SER A . n A 1 10 ASP 10 445 445 ASP ASP A . n A 1 11 GLU 11 446 446 GLU GLU A . n A 1 12 ALA 12 447 447 ALA ALA A . n A 1 13 SER 13 448 448 SER SER A . n A 1 14 GLY 14 449 449 GLY GLY A . n A 1 15 CYS 15 450 450 CYS CYS A . n A 1 16 HIS 16 451 451 HIS HIS A . n A 1 17 TYR 17 452 452 TYR TYR A . n A 1 18 GLY 18 453 453 GLY GLY A . n A 1 19 VAL 19 454 454 VAL VAL A . n A 1 20 LEU 20 455 455 LEU LEU A . n A 1 21 THR 21 456 456 THR THR A . n A 1 22 CYS 22 457 457 CYS CYS A . n A 1 23 GLY 23 458 458 GLY GLY A . n A 1 24 SER 24 459 459 SER SER A . n A 1 25 CYS 25 460 460 CYS CYS A . n A 1 26 LYS 26 461 461 LYS LYS A . n A 1 27 VAL 27 462 462 VAL VAL A . n A 1 28 PHE 28 463 463 PHE PHE A . n A 1 29 PHE 29 464 464 PHE PHE A . n A 1 30 LYS 30 465 465 LYS LYS A . n A 1 31 ARG 31 466 466 ARG ARG A . n A 1 32 ALA 32 467 467 ALA ALA A . n A 1 33 VAL 33 468 468 VAL VAL A . n A 1 34 GLU 34 469 469 GLU GLU A . n A 1 35 GLY 35 470 470 GLY GLY A . n A 1 36 GLN 36 471 471 GLN GLN A . n A 1 37 HIS 37 472 472 HIS HIS A . n A 1 38 ASN 38 473 473 ASN ASN A . n A 1 39 TYR 39 474 474 TYR TYR A . n A 1 40 LEU 40 475 475 LEU LEU A . n A 1 41 CYS 41 476 476 CYS CYS A . n A 1 42 ALA 42 477 477 ALA ALA A . n A 1 43 GLY 43 478 478 GLY GLY A . n A 1 44 ARG 44 479 479 ARG ARG A . n A 1 45 ASN 45 480 480 ASN ASN A . n A 1 46 ASP 46 481 481 ASP ASP A . n A 1 47 CYS 47 482 482 CYS CYS A . n A 1 48 ILE 48 483 483 ILE ILE A . n A 1 49 ILE 49 484 484 ILE ILE A . n A 1 50 ASP 50 485 485 ASP ASP A . n A 1 51 LYS 51 486 486 LYS LYS A . n A 1 52 ILE 52 487 487 ILE ILE A . n A 1 53 ARG 53 488 488 ARG ARG A . n A 1 54 ARG 54 489 489 ARG ARG A . n A 1 55 LYS 55 490 490 LYS LYS A . n A 1 56 ASN 56 491 491 ASN ASN A . n A 1 57 CYS 57 492 492 CYS CYS A . n A 1 58 PRO 58 493 493 PRO PRO A . n A 1 59 ALA 59 494 494 ALA ALA A . n A 1 60 CYS 60 495 495 CYS CYS A . n A 1 61 ARG 61 496 496 ARG ARG A . n A 1 62 TYR 62 497 497 TYR TYR A . n A 1 63 ARG 63 498 498 ARG ARG A . n A 1 64 LYS 64 499 499 LYS LYS A . n A 1 65 CYS 65 500 500 CYS CYS A . n A 1 66 LEU 66 501 501 LEU LEU A . n A 1 67 GLN 67 502 502 GLN GLN A . n A 1 68 ALA 68 503 503 ALA ALA A . n A 1 69 GLY 69 504 504 GLY GLY A . n A 1 70 MET 70 505 505 MET MET A . n A 1 71 ASN 71 506 506 ASN ASN A . n A 1 72 LEU 72 507 507 LEU LEU A . n A 1 73 GLU 73 508 508 GLU GLU A . n A 1 74 ALA 74 509 509 ALA ALA A . n A 1 75 ARG 75 510 510 ARG ARG A . n A 1 76 LYS 76 511 511 LYS LYS A . n A 1 77 THR 77 512 512 THR THR A . n A 1 78 LYS 78 513 513 LYS LYS A . n A 1 79 LYS 79 514 514 LYS LYS A . n A 1 80 LYS 80 515 ? ? ? A . n A 1 81 ILE 81 516 ? ? ? A . n A 1 82 LYS 82 517 ? ? ? A . n A 1 83 GLY 83 518 ? ? ? A . n A 1 84 ILE 84 519 ? ? ? A . n A 1 85 GLN 85 520 ? ? ? A . n A 1 86 GLN 86 521 ? ? ? A . n A 1 87 ALA 87 522 ? ? ? A . n A 1 88 THR 88 523 ? ? ? A . n A 1 89 ALA 89 524 ? ? ? A . n A 1 90 GLY 90 525 ? ? ? A . n B 1 1 GLY 1 436 ? ? ? B . n B 1 2 SER 2 437 ? ? ? B . n B 1 3 HIS 3 438 438 HIS HIS B . n B 1 4 MET 4 439 439 MET MET B . n B 1 5 CYS 5 440 440 CYS CYS B . n B 1 6 LEU 6 441 441 LEU LEU B . n B 1 7 VAL 7 442 442 VAL VAL B . n B 1 8 CYS 8 443 443 CYS CYS B . n B 1 9 SER 9 444 444 SER SER B . n B 1 10 ASP 10 445 445 ASP ASP B . n B 1 11 GLU 11 446 446 GLU GLU B . n B 1 12 ALA 12 447 447 ALA ALA B . n B 1 13 SER 13 448 448 SER SER B . n B 1 14 GLY 14 449 449 GLY GLY B . n B 1 15 CYS 15 450 450 CYS CYS B . n B 1 16 HIS 16 451 451 HIS HIS B . n B 1 17 TYR 17 452 452 TYR TYR B . n B 1 18 GLY 18 453 453 GLY GLY B . n B 1 19 VAL 19 454 454 VAL VAL B . n B 1 20 LEU 20 455 455 LEU LEU B . n B 1 21 THR 21 456 456 THR THR B . n B 1 22 CYS 22 457 457 CYS CYS B . n B 1 23 GLY 23 458 458 GLY GLY B . n B 1 24 SER 24 459 459 SER SER B . n B 1 25 CYS 25 460 460 CYS CYS B . n B 1 26 LYS 26 461 461 LYS LYS B . n B 1 27 VAL 27 462 462 VAL VAL B . n B 1 28 PHE 28 463 463 PHE PHE B . n B 1 29 PHE 29 464 464 PHE PHE B . n B 1 30 LYS 30 465 465 LYS LYS B . n B 1 31 ARG 31 466 466 ARG ARG B . n B 1 32 ALA 32 467 467 ALA ALA B . n B 1 33 VAL 33 468 468 VAL VAL B . n B 1 34 GLU 34 469 469 GLU GLU B . n B 1 35 GLY 35 470 470 GLY GLY B . n B 1 36 GLN 36 471 471 GLN GLN B . n B 1 37 HIS 37 472 472 HIS HIS B . n B 1 38 ASN 38 473 473 ASN ASN B . n B 1 39 TYR 39 474 474 TYR TYR B . n B 1 40 LEU 40 475 475 LEU LEU B . n B 1 41 CYS 41 476 476 CYS CYS B . n B 1 42 ALA 42 477 477 ALA ALA B . n B 1 43 GLY 43 478 478 GLY GLY B . n B 1 44 ARG 44 479 479 ARG ARG B . n B 1 45 ASN 45 480 480 ASN ASN B . n B 1 46 ASP 46 481 481 ASP ASP B . n B 1 47 CYS 47 482 482 CYS CYS B . n B 1 48 ILE 48 483 483 ILE ILE B . n B 1 49 ILE 49 484 484 ILE ILE B . n B 1 50 ASP 50 485 485 ASP ASP B . n B 1 51 LYS 51 486 486 LYS LYS B . n B 1 52 ILE 52 487 487 ILE ILE B . n B 1 53 ARG 53 488 488 ARG ARG B . n B 1 54 ARG 54 489 489 ARG ARG B . n B 1 55 LYS 55 490 490 LYS LYS B . n B 1 56 ASN 56 491 491 ASN ASN B . n B 1 57 CYS 57 492 492 CYS CYS B . n B 1 58 PRO 58 493 493 PRO PRO B . n B 1 59 ALA 59 494 494 ALA ALA B . n B 1 60 CYS 60 495 495 CYS CYS B . n B 1 61 ARG 61 496 496 ARG ARG B . n B 1 62 TYR 62 497 497 TYR TYR B . n B 1 63 ARG 63 498 498 ARG ARG B . n B 1 64 LYS 64 499 499 LYS LYS B . n B 1 65 CYS 65 500 500 CYS CYS B . n B 1 66 LEU 66 501 501 LEU LEU B . n B 1 67 GLN 67 502 502 GLN GLN B . n B 1 68 ALA 68 503 503 ALA ALA B . n B 1 69 GLY 69 504 504 GLY GLY B . n B 1 70 MET 70 505 505 MET MET B . n B 1 71 ASN 71 506 506 ASN ASN B . n B 1 72 LEU 72 507 507 LEU LEU B . n B 1 73 GLU 73 508 508 GLU GLU B . n B 1 74 ALA 74 509 509 ALA ALA B . n B 1 75 ARG 75 510 510 ARG ARG B . n B 1 76 LYS 76 511 511 LYS LYS B . n B 1 77 THR 77 512 512 THR THR B . n B 1 78 LYS 78 513 513 LYS ALA B . n B 1 79 LYS 79 514 514 LYS LYS B . n B 1 80 LYS 80 515 515 LYS LYS B . n B 1 81 ILE 81 516 ? ? ? B . n B 1 82 LYS 82 517 ? ? ? B . n B 1 83 GLY 83 518 ? ? ? B . n B 1 84 ILE 84 519 ? ? ? B . n B 1 85 GLN 85 520 ? ? ? B . n B 1 86 GLN 86 521 ? ? ? B . n B 1 87 ALA 87 522 ? ? ? B . n B 1 88 THR 88 523 ? ? ? B . n B 1 89 ALA 89 524 ? ? ? B . n B 1 90 GLY 90 525 ? ? ? B . n C 2 1 DT 1 1 1 DT DT D . n C 2 2 DC 2 2 2 DC DC D . n C 2 3 DG 3 3 3 DG DG D . n C 2 4 DG 4 4 4 DG DG D . n C 2 5 DA 5 5 5 DA DA D . n C 2 6 DC 6 6 6 DC DC D . n C 2 7 DA 7 7 7 DA DA D . n C 2 8 DA 8 8 8 DA DA D . n C 2 9 DA 9 9 9 DA DA D . n C 2 10 DA 10 10 10 DA DA D . n C 2 11 DT 11 11 11 DT DT D . n C 2 12 DG 12 12 12 DG DG D . n C 2 13 DT 13 13 13 DT DT D . n C 2 14 DT 14 14 14 DT DT D . n C 2 15 DC 15 15 15 DC DC D . n C 2 16 DT 16 16 16 DT DT D . n D 3 1 DA 1 1 1 DA DA C . n D 3 2 DA 2 2 2 DA DA C . n D 3 3 DG 3 3 3 DG DG C . n D 3 4 DA 4 4 4 DA DA C . n D 3 5 DA 5 5 5 DA DA C . n D 3 6 DC 6 6 6 DC DC C . n D 3 7 DA 7 7 7 DA DA C . n D 3 8 DT 8 8 8 DT DT C . n D 3 9 DT 9 9 9 DT DT C . n D 3 10 DT 10 10 10 DT DT C . n D 3 11 DT 11 11 11 DT DT C . n D 3 12 DG 12 12 12 DG DG C . n D 3 13 DT 13 13 13 DT DT C . n D 3 14 DC 14 14 14 DC DC C . n D 3 15 DC 15 15 15 DC DC C . n D 3 16 DG 16 16 16 DG DG C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 ZN 1 526 518 ZN ZN A . F 4 ZN 1 527 519 ZN ZN A . G 5 EDO 1 1 1 EDO EDO A . H 5 EDO 1 528 1 EDO EDO A . I 4 ZN 1 526 517 ZN ZN B . J 4 ZN 1 527 518 ZN ZN B . K 6 HOH 1 7 7 HOH HOH A . K 6 HOH 2 8 8 HOH HOH A . K 6 HOH 3 10 10 HOH HOH A . K 6 HOH 4 13 13 HOH HOH A . K 6 HOH 5 18 18 HOH HOH A . K 6 HOH 6 19 19 HOH HOH A . K 6 HOH 7 21 21 HOH HOH A . K 6 HOH 8 24 24 HOH HOH A . K 6 HOH 9 26 26 HOH HOH A . K 6 HOH 10 28 28 HOH HOH A . K 6 HOH 11 32 32 HOH HOH A . K 6 HOH 12 34 34 HOH HOH A . K 6 HOH 13 35 35 HOH HOH A . K 6 HOH 14 38 38 HOH HOH A . K 6 HOH 15 39 39 HOH HOH A . K 6 HOH 16 40 40 HOH HOH A . K 6 HOH 17 44 44 HOH HOH A . K 6 HOH 18 45 45 HOH HOH A . K 6 HOH 19 48 48 HOH HOH A . K 6 HOH 20 50 50 HOH HOH A . K 6 HOH 21 51 51 HOH HOH A . K 6 HOH 22 53 53 HOH HOH A . K 6 HOH 23 55 55 HOH HOH A . K 6 HOH 24 57 57 HOH HOH A . K 6 HOH 25 61 61 HOH HOH A . K 6 HOH 26 62 62 HOH HOH A . K 6 HOH 27 63 63 HOH HOH A . K 6 HOH 28 66 66 HOH HOH A . K 6 HOH 29 68 68 HOH HOH A . K 6 HOH 30 69 69 HOH HOH A . K 6 HOH 31 72 72 HOH HOH A . K 6 HOH 32 79 79 HOH HOH A . K 6 HOH 33 80 80 HOH HOH A . K 6 HOH 34 81 81 HOH HOH A . K 6 HOH 35 82 82 HOH HOH A . K 6 HOH 36 83 83 HOH HOH A . K 6 HOH 37 88 88 HOH HOH A . K 6 HOH 38 89 89 HOH HOH A . K 6 HOH 39 95 95 HOH HOH A . K 6 HOH 40 97 97 HOH HOH A . K 6 HOH 41 98 98 HOH HOH A . K 6 HOH 42 99 99 HOH HOH A . K 6 HOH 43 102 102 HOH HOH A . K 6 HOH 44 107 107 HOH HOH A . K 6 HOH 45 110 110 HOH HOH A . K 6 HOH 46 116 116 HOH HOH A . K 6 HOH 47 120 120 HOH HOH A . K 6 HOH 48 121 121 HOH HOH A . K 6 HOH 49 123 123 HOH HOH A . K 6 HOH 50 127 127 HOH HOH A . K 6 HOH 51 128 128 HOH HOH A . K 6 HOH 52 129 129 HOH HOH A . K 6 HOH 53 136 136 HOH HOH A . K 6 HOH 54 148 148 HOH HOH A . K 6 HOH 55 149 149 HOH HOH A . K 6 HOH 56 150 150 HOH HOH A . K 6 HOH 57 151 151 HOH HOH A . K 6 HOH 58 154 154 HOH HOH A . K 6 HOH 59 155 155 HOH HOH A . K 6 HOH 60 156 156 HOH HOH A . K 6 HOH 61 157 157 HOH HOH A . K 6 HOH 62 158 158 HOH HOH A . K 6 HOH 63 159 159 HOH HOH A . K 6 HOH 64 165 165 HOH HOH A . K 6 HOH 65 168 168 HOH HOH A . K 6 HOH 66 173 173 HOH HOH A . K 6 HOH 67 176 176 HOH HOH A . K 6 HOH 68 179 179 HOH HOH A . K 6 HOH 69 181 181 HOH HOH A . K 6 HOH 70 183 183 HOH HOH A . K 6 HOH 71 205 205 HOH HOH A . K 6 HOH 72 206 206 HOH HOH A . K 6 HOH 73 208 208 HOH HOH A . K 6 HOH 74 211 211 HOH HOH A . K 6 HOH 75 213 213 HOH HOH A . K 6 HOH 76 218 218 HOH HOH A . K 6 HOH 77 220 220 HOH HOH A . K 6 HOH 78 221 221 HOH HOH A . K 6 HOH 79 223 223 HOH HOH A . K 6 HOH 80 226 226 HOH HOH A . K 6 HOH 81 228 228 HOH HOH A . K 6 HOH 82 229 229 HOH HOH A . K 6 HOH 83 230 230 HOH HOH A . K 6 HOH 84 234 234 HOH HOH A . K 6 HOH 85 238 238 HOH HOH A . K 6 HOH 86 239 239 HOH HOH A . K 6 HOH 87 246 246 HOH HOH A . K 6 HOH 88 251 251 HOH HOH A . K 6 HOH 89 252 252 HOH HOH A . K 6 HOH 90 253 253 HOH HOH A . K 6 HOH 91 258 258 HOH HOH A . K 6 HOH 92 529 1 HOH HOH A . L 6 HOH 1 2 2 HOH HOH B . L 6 HOH 2 11 11 HOH HOH B . L 6 HOH 3 12 12 HOH HOH B . L 6 HOH 4 14 14 HOH HOH B . L 6 HOH 5 17 17 HOH HOH B . L 6 HOH 6 20 20 HOH HOH B . L 6 HOH 7 22 22 HOH HOH B . L 6 HOH 8 23 23 HOH HOH B . L 6 HOH 9 27 27 HOH HOH B . L 6 HOH 10 29 29 HOH HOH B . L 6 HOH 11 30 30 HOH HOH B . L 6 HOH 12 31 31 HOH HOH B . L 6 HOH 13 36 36 HOH HOH B . L 6 HOH 14 46 46 HOH HOH B . L 6 HOH 15 47 47 HOH HOH B . L 6 HOH 16 54 54 HOH HOH B . L 6 HOH 17 60 60 HOH HOH B . L 6 HOH 18 71 71 HOH HOH B . L 6 HOH 19 73 73 HOH HOH B . L 6 HOH 20 75 75 HOH HOH B . L 6 HOH 21 76 76 HOH HOH B . L 6 HOH 22 78 78 HOH HOH B . L 6 HOH 23 85 85 HOH HOH B . L 6 HOH 24 86 86 HOH HOH B . L 6 HOH 25 87 87 HOH HOH B . L 6 HOH 26 90 90 HOH HOH B . L 6 HOH 27 93 93 HOH HOH B . L 6 HOH 28 96 96 HOH HOH B . L 6 HOH 29 103 103 HOH HOH B . L 6 HOH 30 104 104 HOH HOH B . L 6 HOH 31 106 106 HOH HOH B . L 6 HOH 32 109 109 HOH HOH B . L 6 HOH 33 114 114 HOH HOH B . L 6 HOH 34 118 118 HOH HOH B . L 6 HOH 35 122 122 HOH HOH B . L 6 HOH 36 124 124 HOH HOH B . L 6 HOH 37 125 125 HOH HOH B . L 6 HOH 38 126 126 HOH HOH B . L 6 HOH 39 130 130 HOH HOH B . L 6 HOH 40 131 131 HOH HOH B . L 6 HOH 41 133 133 HOH HOH B . L 6 HOH 42 134 134 HOH HOH B . L 6 HOH 43 137 137 HOH HOH B . L 6 HOH 44 138 138 HOH HOH B . L 6 HOH 45 142 142 HOH HOH B . L 6 HOH 46 143 143 HOH HOH B . L 6 HOH 47 144 144 HOH HOH B . L 6 HOH 48 145 145 HOH HOH B . L 6 HOH 49 153 153 HOH HOH B . L 6 HOH 50 160 160 HOH HOH B . L 6 HOH 51 161 161 HOH HOH B . L 6 HOH 52 162 162 HOH HOH B . L 6 HOH 53 167 167 HOH HOH B . L 6 HOH 54 170 170 HOH HOH B . L 6 HOH 55 174 174 HOH HOH B . L 6 HOH 56 175 175 HOH HOH B . L 6 HOH 57 182 182 HOH HOH B . L 6 HOH 58 189 189 HOH HOH B . L 6 HOH 59 190 190 HOH HOH B . L 6 HOH 60 191 191 HOH HOH B . L 6 HOH 61 192 192 HOH HOH B . L 6 HOH 62 193 193 HOH HOH B . L 6 HOH 63 197 197 HOH HOH B . L 6 HOH 64 198 198 HOH HOH B . L 6 HOH 65 199 199 HOH HOH B . L 6 HOH 66 200 200 HOH HOH B . L 6 HOH 67 203 203 HOH HOH B . L 6 HOH 68 204 204 HOH HOH B . L 6 HOH 69 214 214 HOH HOH B . L 6 HOH 70 215 215 HOH HOH B . L 6 HOH 71 216 216 HOH HOH B . L 6 HOH 72 227 227 HOH HOH B . L 6 HOH 73 231 231 HOH HOH B . L 6 HOH 74 232 232 HOH HOH B . L 6 HOH 75 235 235 HOH HOH B . L 6 HOH 76 236 236 HOH HOH B . L 6 HOH 77 241 241 HOH HOH B . L 6 HOH 78 242 242 HOH HOH B . L 6 HOH 79 243 243 HOH HOH B . L 6 HOH 80 245 245 HOH HOH B . L 6 HOH 81 247 247 HOH HOH B . L 6 HOH 82 249 249 HOH HOH B . L 6 HOH 83 257 257 HOH HOH B . M 6 HOH 1 25 25 HOH HOH D . M 6 HOH 2 49 49 HOH HOH D . M 6 HOH 3 52 52 HOH HOH D . M 6 HOH 4 56 56 HOH HOH D . M 6 HOH 5 59 59 HOH HOH D . M 6 HOH 6 64 64 HOH HOH D . M 6 HOH 7 65 65 HOH HOH D . M 6 HOH 8 67 67 HOH HOH D . M 6 HOH 9 70 70 HOH HOH D . M 6 HOH 10 84 84 HOH HOH D . M 6 HOH 11 91 91 HOH HOH D . M 6 HOH 12 92 92 HOH HOH D . M 6 HOH 13 94 94 HOH HOH D . M 6 HOH 14 101 101 HOH HOH D . M 6 HOH 15 119 119 HOH HOH D . M 6 HOH 16 135 135 HOH HOH D . M 6 HOH 17 139 139 HOH HOH D . M 6 HOH 18 141 141 HOH HOH D . M 6 HOH 19 147 147 HOH HOH D . M 6 HOH 20 152 152 HOH HOH D . M 6 HOH 21 163 163 HOH HOH D . M 6 HOH 22 166 166 HOH HOH D . M 6 HOH 23 169 169 HOH HOH D . M 6 HOH 24 171 171 HOH HOH D . M 6 HOH 25 177 177 HOH HOH D . M 6 HOH 26 184 184 HOH HOH D . M 6 HOH 27 185 185 HOH HOH D . M 6 HOH 28 194 194 HOH HOH D . M 6 HOH 29 202 202 HOH HOH D . M 6 HOH 30 209 209 HOH HOH D . M 6 HOH 31 210 210 HOH HOH D . M 6 HOH 32 212 212 HOH HOH D . M 6 HOH 33 219 219 HOH HOH D . M 6 HOH 34 225 225 HOH HOH D . M 6 HOH 35 237 237 HOH HOH D . M 6 HOH 36 250 250 HOH HOH D . N 6 HOH 1 17 3 HOH HOH C . N 6 HOH 2 19 6 HOH HOH C . N 6 HOH 3 20 9 HOH HOH C . N 6 HOH 4 21 15 HOH HOH C . N 6 HOH 5 22 16 HOH HOH C . N 6 HOH 6 37 37 HOH HOH C . N 6 HOH 7 42 42 HOH HOH C . N 6 HOH 8 43 43 HOH HOH C . N 6 HOH 9 58 58 HOH HOH C . N 6 HOH 10 74 74 HOH HOH C . N 6 HOH 11 77 77 HOH HOH C . N 6 HOH 12 100 100 HOH HOH C . N 6 HOH 13 105 105 HOH HOH C . N 6 HOH 14 108 108 HOH HOH C . N 6 HOH 15 111 111 HOH HOH C . N 6 HOH 16 112 112 HOH HOH C . N 6 HOH 17 113 113 HOH HOH C . N 6 HOH 18 115 115 HOH HOH C . N 6 HOH 19 117 117 HOH HOH C . N 6 HOH 20 132 132 HOH HOH C . N 6 HOH 21 140 140 HOH HOH C . N 6 HOH 22 146 146 HOH HOH C . N 6 HOH 23 164 164 HOH HOH C . N 6 HOH 24 172 172 HOH HOH C . N 6 HOH 25 178 178 HOH HOH C . N 6 HOH 26 180 180 HOH HOH C . N 6 HOH 27 186 186 HOH HOH C . N 6 HOH 28 187 187 HOH HOH C . N 6 HOH 29 188 188 HOH HOH C . N 6 HOH 30 195 195 HOH HOH C . N 6 HOH 31 196 196 HOH HOH C . N 6 HOH 32 201 201 HOH HOH C . N 6 HOH 33 207 207 HOH HOH C . N 6 HOH 34 217 217 HOH HOH C . N 6 HOH 35 222 222 HOH HOH C . N 6 HOH 36 224 224 HOH HOH C . N 6 HOH 37 233 233 HOH HOH C . N 6 HOH 38 240 240 HOH HOH C . N 6 HOH 39 244 244 HOH HOH C . N 6 HOH 40 248 248 HOH HOH C . N 6 HOH 41 254 254 HOH HOH C . N 6 HOH 42 255 255 HOH HOH C . N 6 HOH 43 256 256 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5800 ? 1 MORE -28 ? 1 'SSA (A^2)' 13020 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id D _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 101 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id M _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 5 ? A CYS 440 ? 1_555 ZN ? E ZN . ? A ZN 526 ? 1_555 SG ? A CYS 8 ? A CYS 443 ? 1_555 110.9 ? 2 SG ? A CYS 5 ? A CYS 440 ? 1_555 ZN ? E ZN . ? A ZN 526 ? 1_555 SG ? A CYS 22 ? A CYS 457 ? 1_555 114.5 ? 3 SG ? A CYS 8 ? A CYS 443 ? 1_555 ZN ? E ZN . ? A ZN 526 ? 1_555 SG ? A CYS 22 ? A CYS 457 ? 1_555 107.8 ? 4 SG ? A CYS 5 ? A CYS 440 ? 1_555 ZN ? E ZN . ? A ZN 526 ? 1_555 SG ? A CYS 25 ? A CYS 460 ? 1_555 108.0 ? 5 SG ? A CYS 8 ? A CYS 443 ? 1_555 ZN ? E ZN . ? A ZN 526 ? 1_555 SG ? A CYS 25 ? A CYS 460 ? 1_555 111.6 ? 6 SG ? A CYS 22 ? A CYS 457 ? 1_555 ZN ? E ZN . ? A ZN 526 ? 1_555 SG ? A CYS 25 ? A CYS 460 ? 1_555 103.9 ? 7 SG ? A CYS 41 ? A CYS 476 ? 1_555 ZN ? F ZN . ? A ZN 527 ? 1_555 SG ? A CYS 47 ? A CYS 482 ? 1_555 103.8 ? 8 SG ? A CYS 41 ? A CYS 476 ? 1_555 ZN ? F ZN . ? A ZN 527 ? 1_555 SG ? A CYS 57 ? A CYS 492 ? 1_555 113.9 ? 9 SG ? A CYS 47 ? A CYS 482 ? 1_555 ZN ? F ZN . ? A ZN 527 ? 1_555 SG ? A CYS 57 ? A CYS 492 ? 1_555 113.9 ? 10 SG ? A CYS 41 ? A CYS 476 ? 1_555 ZN ? F ZN . ? A ZN 527 ? 1_555 SG ? A CYS 60 ? A CYS 495 ? 1_555 109.7 ? 11 SG ? A CYS 47 ? A CYS 482 ? 1_555 ZN ? F ZN . ? A ZN 527 ? 1_555 SG ? A CYS 60 ? A CYS 495 ? 1_555 109.7 ? 12 SG ? A CYS 57 ? A CYS 492 ? 1_555 ZN ? F ZN . ? A ZN 527 ? 1_555 SG ? A CYS 60 ? A CYS 495 ? 1_555 105.7 ? 13 SG ? B CYS 5 ? B CYS 440 ? 1_555 ZN ? I ZN . ? B ZN 526 ? 1_555 SG ? B CYS 8 ? B CYS 443 ? 1_555 110.3 ? 14 SG ? B CYS 5 ? B CYS 440 ? 1_555 ZN ? I ZN . ? B ZN 526 ? 1_555 SG ? B CYS 22 ? B CYS 457 ? 1_555 116.0 ? 15 SG ? B CYS 8 ? B CYS 443 ? 1_555 ZN ? I ZN . ? B ZN 526 ? 1_555 SG ? B CYS 22 ? B CYS 457 ? 1_555 106.4 ? 16 SG ? B CYS 5 ? B CYS 440 ? 1_555 ZN ? I ZN . ? B ZN 526 ? 1_555 SG ? B CYS 25 ? B CYS 460 ? 1_555 109.7 ? 17 SG ? B CYS 8 ? B CYS 443 ? 1_555 ZN ? I ZN . ? B ZN 526 ? 1_555 SG ? B CYS 25 ? B CYS 460 ? 1_555 112.1 ? 18 SG ? B CYS 22 ? B CYS 457 ? 1_555 ZN ? I ZN . ? B ZN 526 ? 1_555 SG ? B CYS 25 ? B CYS 460 ? 1_555 102.2 ? 19 SG ? B CYS 41 ? B CYS 476 ? 1_555 ZN ? J ZN . ? B ZN 527 ? 1_555 SG ? B CYS 47 ? B CYS 482 ? 1_555 104.4 ? 20 SG ? B CYS 41 ? B CYS 476 ? 1_555 ZN ? J ZN . ? B ZN 527 ? 1_555 SG ? B CYS 57 ? B CYS 492 ? 1_555 112.6 ? 21 SG ? B CYS 47 ? B CYS 482 ? 1_555 ZN ? J ZN . ? B ZN 527 ? 1_555 SG ? B CYS 57 ? B CYS 492 ? 1_555 113.2 ? 22 SG ? B CYS 41 ? B CYS 476 ? 1_555 ZN ? J ZN . ? B ZN 527 ? 1_555 SG ? B CYS 60 ? B CYS 495 ? 1_555 108.5 ? 23 SG ? B CYS 47 ? B CYS 482 ? 1_555 ZN ? J ZN . ? B ZN 527 ? 1_555 SG ? B CYS 60 ? B CYS 495 ? 1_555 110.9 ? 24 SG ? B CYS 57 ? B CYS 492 ? 1_555 ZN ? J ZN . ? B ZN 527 ? 1_555 SG ? B CYS 60 ? B CYS 495 ? 1_555 107.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-04-21 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 12.5348 21.3798 40.9794 0.1240 0.1592 0.1837 0.0028 0.0072 0.0155 2.1879 0.9618 0.6025 0.1441 0.5042 0.2175 0.1148 0.0774 -0.3338 -0.0306 -0.0563 -0.1163 -0.0014 0.1439 -0.0642 'X-RAY DIFFRACTION' 2 ? refined -3.7920 15.6359 17.8667 0.2720 0.2713 0.1472 -0.0187 -0.0376 -0.0058 0.8205 0.4682 1.0459 0.1342 -0.7218 -0.6851 -0.0440 0.3170 -0.0354 -0.3110 0.0699 0.1350 0.0870 -0.3092 -0.0644 'X-RAY DIFFRACTION' 3 ? refined 17.7766 22.2850 22.1713 0.2127 0.4250 0.0738 -0.1282 0.0515 -0.0669 2.3504 1.7064 1.9556 0.7317 1.2784 1.1615 -0.1554 0.7416 -0.3230 -0.3791 0.4830 -0.1081 -0.5692 0.9721 -0.2583 'X-RAY DIFFRACTION' 4 ? refined 15.8295 19.3511 18.5334 0.1895 0.6432 0.1629 -0.0341 0.0372 -0.1522 -0.7897 1.4411 3.5982 1.5317 2.1544 0.7361 -0.2436 0.7597 -0.3056 -0.2908 0.4740 -0.2699 -0.5212 0.9703 -0.2114 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.pdbx_refine_id 1 1 ? ? ? ? ? ? ? ? ? 'Chain A' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? 'Chain B' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? 'Chain C' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? 'Chain D' 'X-RAY DIFFRACTION' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHENIX 'model building' . ? 2 PHENIX refinement '(phenix.refine)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 PHENIX phasing . ? 6 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OP2 _pdbx_validate_symm_contact.auth_asym_id_1 D _pdbx_validate_symm_contact.auth_comp_id_1 DT _pdbx_validate_symm_contact.auth_seq_id_1 16 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 "O5'" _pdbx_validate_symm_contact.auth_asym_id_2 C _pdbx_validate_symm_contact.auth_comp_id_2 DA _pdbx_validate_symm_contact.auth_seq_id_2 1 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_656 _pdbx_validate_symm_contact.dist 2.06 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "O3'" _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 DC _pdbx_validate_rmsd_bond.auth_seq_id_1 15 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 "C3'" _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 DC _pdbx_validate_rmsd_bond.auth_seq_id_2 15 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.332 _pdbx_validate_rmsd_bond.bond_target_value 1.419 _pdbx_validate_rmsd_bond.bond_deviation -0.087 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.006 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 510 ? ? CZ A ARG 510 ? ? NH2 A ARG 510 ? ? 123.75 120.30 3.45 0.50 N 2 1 N3 D DT 1 ? ? C4 D DT 1 ? ? O4 D DT 1 ? ? 123.59 119.90 3.69 0.60 N 3 1 "C3'" D DG 3 ? ? "C2'" D DG 3 ? ? "C1'" D DG 3 ? ? 97.20 102.40 -5.20 0.80 N 4 1 "O4'" D DG 3 ? ? "C1'" D DG 3 ? ? N9 D DG 3 ? ? 113.71 108.30 5.41 0.30 N 5 1 "O4'" D DA 8 ? ? "C1'" D DA 8 ? ? N9 D DA 8 ? ? 102.28 108.00 -5.72 0.70 N 6 1 N1 D DA 8 ? ? C6 D DA 8 ? ? N6 D DA 8 ? ? 123.25 118.60 4.65 0.60 N 7 1 "O4'" D DA 9 ? ? "C1'" D DA 9 ? ? N9 D DA 9 ? ? 101.23 108.00 -6.77 0.70 N 8 1 N1 D DA 9 ? ? C6 D DA 9 ? ? N6 D DA 9 ? ? 122.55 118.60 3.95 0.60 N 9 1 C2 D DA 10 ? ? N3 D DA 10 ? ? C4 D DA 10 ? ? 107.51 110.60 -3.09 0.50 N 10 1 "C3'" D DA 10 ? ? "O3'" D DA 10 ? ? P D DT 11 ? ? 127.47 119.70 7.77 1.20 Y 11 1 C4 D DT 11 ? ? C5 D DT 11 ? ? C7 D DT 11 ? ? 122.94 119.00 3.94 0.60 N 12 1 C6 D DT 11 ? ? C5 D DT 11 ? ? C7 D DT 11 ? ? 118.12 122.90 -4.78 0.60 N 13 1 "C3'" D DT 13 ? ? "O3'" D DT 13 ? ? P D DT 14 ? ? 127.57 119.70 7.87 1.20 Y 14 1 "O4'" D DT 14 ? ? "C1'" D DT 14 ? ? N1 D DT 14 ? ? 98.94 108.00 -9.06 0.70 N 15 1 N3 D DT 14 ? ? C4 D DT 14 ? ? O4 D DT 14 ? ? 123.91 119.90 4.01 0.60 N 16 1 C5 D DT 14 ? ? C4 D DT 14 ? ? O4 D DT 14 ? ? 120.43 124.90 -4.47 0.70 N 17 1 "C1'" D DC 15 ? ? "O4'" D DC 15 ? ? "C4'" D DC 15 ? ? 103.81 110.10 -6.29 1.00 N 18 1 "O4'" C DA 1 ? ? "C1'" C DA 1 ? ? N9 C DA 1 ? ? 100.52 108.00 -7.48 0.70 N 19 1 N1 C DA 2 ? ? C2 C DA 2 ? ? N3 C DA 2 ? ? 125.79 129.30 -3.51 0.50 N 20 1 "O4'" C DG 3 ? ? "C1'" C DG 3 ? ? N9 C DG 3 ? ? 111.71 108.30 3.41 0.30 N 21 1 "O4'" C DA 5 ? ? "C1'" C DA 5 ? ? N9 C DA 5 ? ? 103.66 108.00 -4.34 0.70 N 22 1 N3 C DT 8 ? ? C2 C DT 8 ? ? O2 C DT 8 ? ? 118.54 122.30 -3.76 0.60 N 23 1 N3 C DT 9 ? ? C2 C DT 9 ? ? O2 C DT 9 ? ? 116.02 122.30 -6.28 0.60 N 24 1 "O4'" C DT 10 ? ? "C1'" C DT 10 ? ? "C2'" C DT 10 ? ? 100.55 105.90 -5.35 0.80 N 25 1 C6 C DT 10 ? ? N1 C DT 10 ? ? C2 C DT 10 ? ? 118.16 121.30 -3.14 0.50 N 26 1 N3 C DT 10 ? ? C2 C DT 10 ? ? O2 C DT 10 ? ? 115.91 122.30 -6.39 0.60 N 27 1 "O4'" C DC 14 ? ? "C1'" C DC 14 ? ? N1 C DC 14 ? ? 103.06 108.00 -4.94 0.70 N 28 1 "O5'" C DC 15 ? ? "C5'" C DC 15 ? ? "C4'" C DC 15 ? ? 104.55 109.40 -4.85 0.80 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 438 ? ? -166.40 -28.18 2 1 HIS A 472 ? ? -140.88 50.44 3 1 ASP A 481 ? ? -145.46 38.10 4 1 SER B 444 ? ? 72.42 -2.24 5 1 ASP B 481 ? ? -148.41 45.70 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 514 ? CG ? A LYS 79 CG 2 1 Y 1 A LYS 514 ? CD ? A LYS 79 CD 3 1 Y 1 A LYS 514 ? CE ? A LYS 79 CE 4 1 Y 1 A LYS 514 ? NZ ? A LYS 79 NZ 5 1 Y 1 B LYS 513 ? CG ? B LYS 78 CG 6 1 Y 1 B LYS 513 ? CD ? B LYS 78 CD 7 1 Y 1 B LYS 513 ? CE ? B LYS 78 CE 8 1 Y 1 B LYS 513 ? NZ ? B LYS 78 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 436 ? A GLY 1 2 1 Y 1 A LYS 515 ? A LYS 80 3 1 Y 1 A ILE 516 ? A ILE 81 4 1 Y 1 A LYS 517 ? A LYS 82 5 1 Y 1 A GLY 518 ? A GLY 83 6 1 Y 1 A ILE 519 ? A ILE 84 7 1 Y 1 A GLN 520 ? A GLN 85 8 1 Y 1 A GLN 521 ? A GLN 86 9 1 Y 1 A ALA 522 ? A ALA 87 10 1 Y 1 A THR 523 ? A THR 88 11 1 Y 1 A ALA 524 ? A ALA 89 12 1 Y 1 A GLY 525 ? A GLY 90 13 1 Y 1 B GLY 436 ? B GLY 1 14 1 Y 1 B SER 437 ? B SER 2 15 1 Y 1 B ILE 516 ? B ILE 81 16 1 Y 1 B LYS 517 ? B LYS 82 17 1 Y 1 B GLY 518 ? B GLY 83 18 1 Y 1 B ILE 519 ? B ILE 84 19 1 Y 1 B GLN 520 ? B GLN 85 20 1 Y 1 B GLN 521 ? B GLN 86 21 1 Y 1 B ALA 522 ? B ALA 87 22 1 Y 1 B THR 523 ? B THR 88 23 1 Y 1 B ALA 524 ? B ALA 89 24 1 Y 1 B GLY 525 ? B GLY 90 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 EDO C1 C N N 231 EDO O1 O N N 232 EDO C2 C N N 233 EDO O2 O N N 234 EDO H11 H N N 235 EDO H12 H N N 236 EDO HO1 H N N 237 EDO H21 H N N 238 EDO H22 H N N 239 EDO HO2 H N N 240 GLN N N N N 241 GLN CA C N S 242 GLN C C N N 243 GLN O O N N 244 GLN CB C N N 245 GLN CG C N N 246 GLN CD C N N 247 GLN OE1 O N N 248 GLN NE2 N N N 249 GLN OXT O N N 250 GLN H H N N 251 GLN H2 H N N 252 GLN HA H N N 253 GLN HB2 H N N 254 GLN HB3 H N N 255 GLN HG2 H N N 256 GLN HG3 H N N 257 GLN HE21 H N N 258 GLN HE22 H N N 259 GLN HXT H N N 260 GLU N N N N 261 GLU CA C N S 262 GLU C C N N 263 GLU O O N N 264 GLU CB C N N 265 GLU CG C N N 266 GLU CD C N N 267 GLU OE1 O N N 268 GLU OE2 O N N 269 GLU OXT O N N 270 GLU H H N N 271 GLU H2 H N N 272 GLU HA H N N 273 GLU HB2 H N N 274 GLU HB3 H N N 275 GLU HG2 H N N 276 GLU HG3 H N N 277 GLU HE2 H N N 278 GLU HXT H N N 279 GLY N N N N 280 GLY CA C N N 281 GLY C C N N 282 GLY O O N N 283 GLY OXT O N N 284 GLY H H N N 285 GLY H2 H N N 286 GLY HA2 H N N 287 GLY HA3 H N N 288 GLY HXT H N N 289 HIS N N N N 290 HIS CA C N S 291 HIS C C N N 292 HIS O O N N 293 HIS CB C N N 294 HIS CG C Y N 295 HIS ND1 N Y N 296 HIS CD2 C Y N 297 HIS CE1 C Y N 298 HIS NE2 N Y N 299 HIS OXT O N N 300 HIS H H N N 301 HIS H2 H N N 302 HIS HA H N N 303 HIS HB2 H N N 304 HIS HB3 H N N 305 HIS HD1 H N N 306 HIS HD2 H N N 307 HIS HE1 H N N 308 HIS HE2 H N N 309 HIS HXT H N N 310 HOH O O N N 311 HOH H1 H N N 312 HOH H2 H N N 313 ILE N N N N 314 ILE CA C N S 315 ILE C C N N 316 ILE O O N N 317 ILE CB C N S 318 ILE CG1 C N N 319 ILE CG2 C N N 320 ILE CD1 C N N 321 ILE OXT O N N 322 ILE H H N N 323 ILE H2 H N N 324 ILE HA H N N 325 ILE HB H N N 326 ILE HG12 H N N 327 ILE HG13 H N N 328 ILE HG21 H N N 329 ILE HG22 H N N 330 ILE HG23 H N N 331 ILE HD11 H N N 332 ILE HD12 H N N 333 ILE HD13 H N N 334 ILE HXT H N N 335 LEU N N N N 336 LEU CA C N S 337 LEU C C N N 338 LEU O O N N 339 LEU CB C N N 340 LEU CG C N N 341 LEU CD1 C N N 342 LEU CD2 C N N 343 LEU OXT O N N 344 LEU H H N N 345 LEU H2 H N N 346 LEU HA H N N 347 LEU HB2 H N N 348 LEU HB3 H N N 349 LEU HG H N N 350 LEU HD11 H N N 351 LEU HD12 H N N 352 LEU HD13 H N N 353 LEU HD21 H N N 354 LEU HD22 H N N 355 LEU HD23 H N N 356 LEU HXT H N N 357 LYS N N N N 358 LYS CA C N S 359 LYS C C N N 360 LYS O O N N 361 LYS CB C N N 362 LYS CG C N N 363 LYS CD C N N 364 LYS CE C N N 365 LYS NZ N N N 366 LYS OXT O N N 367 LYS H H N N 368 LYS H2 H N N 369 LYS HA H N N 370 LYS HB2 H N N 371 LYS HB3 H N N 372 LYS HG2 H N N 373 LYS HG3 H N N 374 LYS HD2 H N N 375 LYS HD3 H N N 376 LYS HE2 H N N 377 LYS HE3 H N N 378 LYS HZ1 H N N 379 LYS HZ2 H N N 380 LYS HZ3 H N N 381 LYS HXT H N N 382 MET N N N N 383 MET CA C N S 384 MET C C N N 385 MET O O N N 386 MET CB C N N 387 MET CG C N N 388 MET SD S N N 389 MET CE C N N 390 MET OXT O N N 391 MET H H N N 392 MET H2 H N N 393 MET HA H N N 394 MET HB2 H N N 395 MET HB3 H N N 396 MET HG2 H N N 397 MET HG3 H N N 398 MET HE1 H N N 399 MET HE2 H N N 400 MET HE3 H N N 401 MET HXT H N N 402 PHE N N N N 403 PHE CA C N S 404 PHE C C N N 405 PHE O O N N 406 PHE CB C N N 407 PHE CG C Y N 408 PHE CD1 C Y N 409 PHE CD2 C Y N 410 PHE CE1 C Y N 411 PHE CE2 C Y N 412 PHE CZ C Y N 413 PHE OXT O N N 414 PHE H H N N 415 PHE H2 H N N 416 PHE HA H N N 417 PHE HB2 H N N 418 PHE HB3 H N N 419 PHE HD1 H N N 420 PHE HD2 H N N 421 PHE HE1 H N N 422 PHE HE2 H N N 423 PHE HZ H N N 424 PHE HXT H N N 425 PRO N N N N 426 PRO CA C N S 427 PRO C C N N 428 PRO O O N N 429 PRO CB C N N 430 PRO CG C N N 431 PRO CD C N N 432 PRO OXT O N N 433 PRO H H N N 434 PRO HA H N N 435 PRO HB2 H N N 436 PRO HB3 H N N 437 PRO HG2 H N N 438 PRO HG3 H N N 439 PRO HD2 H N N 440 PRO HD3 H N N 441 PRO HXT H N N 442 SER N N N N 443 SER CA C N S 444 SER C C N N 445 SER O O N N 446 SER CB C N N 447 SER OG O N N 448 SER OXT O N N 449 SER H H N N 450 SER H2 H N N 451 SER HA H N N 452 SER HB2 H N N 453 SER HB3 H N N 454 SER HG H N N 455 SER HXT H N N 456 THR N N N N 457 THR CA C N S 458 THR C C N N 459 THR O O N N 460 THR CB C N R 461 THR OG1 O N N 462 THR CG2 C N N 463 THR OXT O N N 464 THR H H N N 465 THR H2 H N N 466 THR HA H N N 467 THR HB H N N 468 THR HG1 H N N 469 THR HG21 H N N 470 THR HG22 H N N 471 THR HG23 H N N 472 THR HXT H N N 473 TYR N N N N 474 TYR CA C N S 475 TYR C C N N 476 TYR O O N N 477 TYR CB C N N 478 TYR CG C Y N 479 TYR CD1 C Y N 480 TYR CD2 C Y N 481 TYR CE1 C Y N 482 TYR CE2 C Y N 483 TYR CZ C Y N 484 TYR OH O N N 485 TYR OXT O N N 486 TYR H H N N 487 TYR H2 H N N 488 TYR HA H N N 489 TYR HB2 H N N 490 TYR HB3 H N N 491 TYR HD1 H N N 492 TYR HD2 H N N 493 TYR HE1 H N N 494 TYR HE2 H N N 495 TYR HH H N N 496 TYR HXT H N N 497 VAL N N N N 498 VAL CA C N S 499 VAL C C N N 500 VAL O O N N 501 VAL CB C N N 502 VAL CG1 C N N 503 VAL CG2 C N N 504 VAL OXT O N N 505 VAL H H N N 506 VAL H2 H N N 507 VAL HA H N N 508 VAL HB H N N 509 VAL HG11 H N N 510 VAL HG12 H N N 511 VAL HG13 H N N 512 VAL HG21 H N N 513 VAL HG22 H N N 514 VAL HG23 H N N 515 VAL HXT H N N 516 ZN ZN ZN N N 517 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 EDO C1 O1 sing N N 232 EDO C1 C2 sing N N 233 EDO C1 H11 sing N N 234 EDO C1 H12 sing N N 235 EDO O1 HO1 sing N N 236 EDO C2 O2 sing N N 237 EDO C2 H21 sing N N 238 EDO C2 H22 sing N N 239 EDO O2 HO2 sing N N 240 GLN N CA sing N N 241 GLN N H sing N N 242 GLN N H2 sing N N 243 GLN CA C sing N N 244 GLN CA CB sing N N 245 GLN CA HA sing N N 246 GLN C O doub N N 247 GLN C OXT sing N N 248 GLN CB CG sing N N 249 GLN CB HB2 sing N N 250 GLN CB HB3 sing N N 251 GLN CG CD sing N N 252 GLN CG HG2 sing N N 253 GLN CG HG3 sing N N 254 GLN CD OE1 doub N N 255 GLN CD NE2 sing N N 256 GLN NE2 HE21 sing N N 257 GLN NE2 HE22 sing N N 258 GLN OXT HXT sing N N 259 GLU N CA sing N N 260 GLU N H sing N N 261 GLU N H2 sing N N 262 GLU CA C sing N N 263 GLU CA CB sing N N 264 GLU CA HA sing N N 265 GLU C O doub N N 266 GLU C OXT sing N N 267 GLU CB CG sing N N 268 GLU CB HB2 sing N N 269 GLU CB HB3 sing N N 270 GLU CG CD sing N N 271 GLU CG HG2 sing N N 272 GLU CG HG3 sing N N 273 GLU CD OE1 doub N N 274 GLU CD OE2 sing N N 275 GLU OE2 HE2 sing N N 276 GLU OXT HXT sing N N 277 GLY N CA sing N N 278 GLY N H sing N N 279 GLY N H2 sing N N 280 GLY CA C sing N N 281 GLY CA HA2 sing N N 282 GLY CA HA3 sing N N 283 GLY C O doub N N 284 GLY C OXT sing N N 285 GLY OXT HXT sing N N 286 HIS N CA sing N N 287 HIS N H sing N N 288 HIS N H2 sing N N 289 HIS CA C sing N N 290 HIS CA CB sing N N 291 HIS CA HA sing N N 292 HIS C O doub N N 293 HIS C OXT sing N N 294 HIS CB CG sing N N 295 HIS CB HB2 sing N N 296 HIS CB HB3 sing N N 297 HIS CG ND1 sing Y N 298 HIS CG CD2 doub Y N 299 HIS ND1 CE1 doub Y N 300 HIS ND1 HD1 sing N N 301 HIS CD2 NE2 sing Y N 302 HIS CD2 HD2 sing N N 303 HIS CE1 NE2 sing Y N 304 HIS CE1 HE1 sing N N 305 HIS NE2 HE2 sing N N 306 HIS OXT HXT sing N N 307 HOH O H1 sing N N 308 HOH O H2 sing N N 309 ILE N CA sing N N 310 ILE N H sing N N 311 ILE N H2 sing N N 312 ILE CA C sing N N 313 ILE CA CB sing N N 314 ILE CA HA sing N N 315 ILE C O doub N N 316 ILE C OXT sing N N 317 ILE CB CG1 sing N N 318 ILE CB CG2 sing N N 319 ILE CB HB sing N N 320 ILE CG1 CD1 sing N N 321 ILE CG1 HG12 sing N N 322 ILE CG1 HG13 sing N N 323 ILE CG2 HG21 sing N N 324 ILE CG2 HG22 sing N N 325 ILE CG2 HG23 sing N N 326 ILE CD1 HD11 sing N N 327 ILE CD1 HD12 sing N N 328 ILE CD1 HD13 sing N N 329 ILE OXT HXT sing N N 330 LEU N CA sing N N 331 LEU N H sing N N 332 LEU N H2 sing N N 333 LEU CA C sing N N 334 LEU CA CB sing N N 335 LEU CA HA sing N N 336 LEU C O doub N N 337 LEU C OXT sing N N 338 LEU CB CG sing N N 339 LEU CB HB2 sing N N 340 LEU CB HB3 sing N N 341 LEU CG CD1 sing N N 342 LEU CG CD2 sing N N 343 LEU CG HG sing N N 344 LEU CD1 HD11 sing N N 345 LEU CD1 HD12 sing N N 346 LEU CD1 HD13 sing N N 347 LEU CD2 HD21 sing N N 348 LEU CD2 HD22 sing N N 349 LEU CD2 HD23 sing N N 350 LEU OXT HXT sing N N 351 LYS N CA sing N N 352 LYS N H sing N N 353 LYS N H2 sing N N 354 LYS CA C sing N N 355 LYS CA CB sing N N 356 LYS CA HA sing N N 357 LYS C O doub N N 358 LYS C OXT sing N N 359 LYS CB CG sing N N 360 LYS CB HB2 sing N N 361 LYS CB HB3 sing N N 362 LYS CG CD sing N N 363 LYS CG HG2 sing N N 364 LYS CG HG3 sing N N 365 LYS CD CE sing N N 366 LYS CD HD2 sing N N 367 LYS CD HD3 sing N N 368 LYS CE NZ sing N N 369 LYS CE HE2 sing N N 370 LYS CE HE3 sing N N 371 LYS NZ HZ1 sing N N 372 LYS NZ HZ2 sing N N 373 LYS NZ HZ3 sing N N 374 LYS OXT HXT sing N N 375 MET N CA sing N N 376 MET N H sing N N 377 MET N H2 sing N N 378 MET CA C sing N N 379 MET CA CB sing N N 380 MET CA HA sing N N 381 MET C O doub N N 382 MET C OXT sing N N 383 MET CB CG sing N N 384 MET CB HB2 sing N N 385 MET CB HB3 sing N N 386 MET CG SD sing N N 387 MET CG HG2 sing N N 388 MET CG HG3 sing N N 389 MET SD CE sing N N 390 MET CE HE1 sing N N 391 MET CE HE2 sing N N 392 MET CE HE3 sing N N 393 MET OXT HXT sing N N 394 PHE N CA sing N N 395 PHE N H sing N N 396 PHE N H2 sing N N 397 PHE CA C sing N N 398 PHE CA CB sing N N 399 PHE CA HA sing N N 400 PHE C O doub N N 401 PHE C OXT sing N N 402 PHE CB CG sing N N 403 PHE CB HB2 sing N N 404 PHE CB HB3 sing N N 405 PHE CG CD1 doub Y N 406 PHE CG CD2 sing Y N 407 PHE CD1 CE1 sing Y N 408 PHE CD1 HD1 sing N N 409 PHE CD2 CE2 doub Y N 410 PHE CD2 HD2 sing N N 411 PHE CE1 CZ doub Y N 412 PHE CE1 HE1 sing N N 413 PHE CE2 CZ sing Y N 414 PHE CE2 HE2 sing N N 415 PHE CZ HZ sing N N 416 PHE OXT HXT sing N N 417 PRO N CA sing N N 418 PRO N CD sing N N 419 PRO N H sing N N 420 PRO CA C sing N N 421 PRO CA CB sing N N 422 PRO CA HA sing N N 423 PRO C O doub N N 424 PRO C OXT sing N N 425 PRO CB CG sing N N 426 PRO CB HB2 sing N N 427 PRO CB HB3 sing N N 428 PRO CG CD sing N N 429 PRO CG HG2 sing N N 430 PRO CG HG3 sing N N 431 PRO CD HD2 sing N N 432 PRO CD HD3 sing N N 433 PRO OXT HXT sing N N 434 SER N CA sing N N 435 SER N H sing N N 436 SER N H2 sing N N 437 SER CA C sing N N 438 SER CA CB sing N N 439 SER CA HA sing N N 440 SER C O doub N N 441 SER C OXT sing N N 442 SER CB OG sing N N 443 SER CB HB2 sing N N 444 SER CB HB3 sing N N 445 SER OG HG sing N N 446 SER OXT HXT sing N N 447 THR N CA sing N N 448 THR N H sing N N 449 THR N H2 sing N N 450 THR CA C sing N N 451 THR CA CB sing N N 452 THR CA HA sing N N 453 THR C O doub N N 454 THR C OXT sing N N 455 THR CB OG1 sing N N 456 THR CB CG2 sing N N 457 THR CB HB sing N N 458 THR OG1 HG1 sing N N 459 THR CG2 HG21 sing N N 460 THR CG2 HG22 sing N N 461 THR CG2 HG23 sing N N 462 THR OXT HXT sing N N 463 TYR N CA sing N N 464 TYR N H sing N N 465 TYR N H2 sing N N 466 TYR CA C sing N N 467 TYR CA CB sing N N 468 TYR CA HA sing N N 469 TYR C O doub N N 470 TYR C OXT sing N N 471 TYR CB CG sing N N 472 TYR CB HB2 sing N N 473 TYR CB HB3 sing N N 474 TYR CG CD1 doub Y N 475 TYR CG CD2 sing Y N 476 TYR CD1 CE1 sing Y N 477 TYR CD1 HD1 sing N N 478 TYR CD2 CE2 doub Y N 479 TYR CD2 HD2 sing N N 480 TYR CE1 CZ doub Y N 481 TYR CE1 HE1 sing N N 482 TYR CE2 CZ sing Y N 483 TYR CE2 HE2 sing N N 484 TYR CZ OH sing N N 485 TYR OH HH sing N N 486 TYR OXT HXT sing N N 487 VAL N CA sing N N 488 VAL N H sing N N 489 VAL N H2 sing N N 490 VAL CA C sing N N 491 VAL CA CB sing N N 492 VAL CA HA sing N N 493 VAL C O doub N N 494 VAL C OXT sing N N 495 VAL CB CG1 sing N N 496 VAL CB CG2 sing N N 497 VAL CB HB sing N N 498 VAL CG1 HG11 sing N N 499 VAL CG1 HG12 sing N N 500 VAL CG1 HG13 sing N N 501 VAL CG2 HG21 sing N N 502 VAL CG2 HG22 sing N N 503 VAL CG2 HG23 sing N N 504 VAL OXT HXT sing N N 505 # _ndb_struct_conf_na.entry_id 3G9M _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DC 2 1_555 D DG 16 1_555 -0.657 -0.191 -0.057 -1.857 -3.095 3.781 1 D_DC2:DG16_C D 2 ? C 16 ? 19 1 1 C DG 3 1_555 D DC 15 1_555 -0.557 -0.198 0.261 10.566 -1.886 2.655 2 D_DG3:DC15_C D 3 ? C 15 ? 19 1 1 C DG 4 1_555 D DC 14 1_555 -0.259 -0.275 0.291 8.587 -11.468 -0.129 3 D_DG4:DC14_C D 4 ? C 14 ? 19 1 1 C DA 5 1_555 D DT 13 1_555 0.043 -0.068 0.135 4.579 -10.305 3.504 4 D_DA5:DT13_C D 5 ? C 13 ? 20 1 1 C DC 6 1_555 D DG 12 1_555 0.245 -0.151 -0.155 10.487 -8.311 -0.482 5 D_DC6:DG12_C D 6 ? C 12 ? 19 1 1 C DA 7 1_555 D DT 11 1_555 0.019 -0.143 0.078 5.676 -7.924 4.573 6 D_DA7:DT11_C D 7 ? C 11 ? 20 1 1 C DA 8 1_555 D DT 10 1_555 0.455 -0.276 0.079 2.271 -13.417 6.108 7 D_DA8:DT10_C D 8 ? C 10 ? 20 1 1 C DA 9 1_555 D DT 9 1_555 0.113 -0.330 0.201 -0.896 -16.296 5.427 8 D_DA9:DT9_C D 9 ? C 9 ? 20 1 1 C DA 10 1_555 D DT 8 1_555 0.109 -0.391 -0.111 -3.753 -12.603 -0.305 9 D_DA10:DT8_C D 10 ? C 8 ? 20 1 1 C DT 11 1_555 D DA 7 1_555 -0.071 -0.133 0.095 -2.421 -8.881 3.820 10 D_DT11:DA7_C D 11 ? C 7 ? 20 1 1 C DG 12 1_555 D DC 6 1_555 -0.363 -0.177 -0.210 -9.808 -11.673 1.579 11 D_DG12:DC6_C D 12 ? C 6 ? 19 1 1 C DT 13 1_555 D DA 5 1_555 -0.215 -0.174 0.252 -8.846 -8.739 4.658 12 D_DT13:DA5_C D 13 ? C 5 ? 20 1 1 C DT 14 1_555 D DA 4 1_555 0.100 -0.115 -0.017 -13.063 -12.216 0.255 13 D_DT14:DA4_C D 14 ? C 4 ? 20 1 1 C DC 15 1_555 D DG 3 1_555 0.251 -0.237 0.319 -11.228 -1.694 -0.371 14 D_DC15:DG3_C D 15 ? C 3 ? 19 1 1 D DA 1 1_555 D DA 2 2_656 0.915 0.392 -0.324 -2.746 -8.910 0.784 15 C_DA1:DA2_C C 1 ? C 2 ? ? 1 1 D DA 2 1_555 D DA 1 2_656 -0.915 0.392 -0.324 2.746 -8.910 0.784 16 C_DA2:DA1_C C 2 ? C 1 ? ? 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DC 2 1_555 D DG 16 1_555 C DG 3 1_555 D DC 15 1_555 0.165 0.310 3.006 -2.391 4.856 27.309 -0.431 -0.874 2.990 10.158 5.001 27.830 1 DD_DC2DG3:DC15DG16_CC D 2 ? C 16 ? D 3 ? C 15 ? 1 C DG 3 1_555 D DC 15 1_555 C DG 4 1_555 D DC 14 1_555 -0.913 0.130 3.351 -1.362 3.154 40.355 -0.175 1.162 3.379 4.562 1.969 40.495 2 DD_DG3DG4:DC14DC15_CC D 3 ? C 15 ? D 4 ? C 14 ? 1 C DG 4 1_555 D DC 14 1_555 C DA 5 1_555 D DT 13 1_555 0.351 -0.004 3.400 2.375 -3.183 38.344 0.404 -0.225 3.404 -4.831 -3.605 38.541 3 DD_DG4DA5:DT13DC14_CC D 4 ? C 14 ? D 5 ? C 13 ? 1 C DA 5 1_555 D DT 13 1_555 C DC 6 1_555 D DG 12 1_555 0.549 -0.560 3.224 1.297 -0.742 36.102 -0.799 -0.704 3.252 -1.196 -2.091 36.132 4 DD_DA5DC6:DG12DT13_CC D 5 ? C 13 ? D 6 ? C 12 ? 1 C DC 6 1_555 D DG 12 1_555 C DA 7 1_555 D DT 11 1_555 0.293 -0.835 3.400 -1.935 3.965 30.725 -2.339 -0.928 3.245 7.434 3.629 31.032 5 DD_DC6DA7:DT11DG12_CC D 6 ? C 12 ? D 7 ? C 11 ? 1 C DA 7 1_555 D DT 11 1_555 C DA 8 1_555 D DT 10 1_555 -0.385 -0.293 3.392 -0.254 -3.545 37.770 0.022 0.559 3.407 -5.462 0.391 37.931 6 DD_DA7DA8:DT10DT11_CC D 7 ? C 11 ? D 8 ? C 10 ? 1 C DA 8 1_555 D DT 10 1_555 C DA 9 1_555 D DT 9 1_555 -0.223 -0.422 3.260 -0.718 -1.054 34.525 -0.548 0.265 3.275 -1.776 1.210 34.548 7 DD_DA8DA9:DT9DT10_CC D 8 ? C 10 ? D 9 ? C 9 ? 1 C DA 9 1_555 D DT 9 1_555 C DA 10 1_555 D DT 8 1_555 -0.082 -0.489 3.319 2.439 -1.684 34.687 -0.556 0.514 3.325 -2.818 -4.082 34.810 8 DD_DA9DA10:DT8DT9_CC D 9 ? C 9 ? D 10 ? C 8 ? 1 C DA 10 1_555 D DT 8 1_555 C DT 11 1_555 D DA 7 1_555 0.373 -0.969 3.237 -2.428 -2.232 33.090 -1.322 -1.055 3.259 -3.906 4.250 33.249 9 DD_DA10DT11:DA7DT8_CC D 10 ? C 8 ? D 11 ? C 7 ? 1 C DT 11 1_555 D DA 7 1_555 C DG 12 1_555 D DC 6 1_555 -0.402 -1.050 3.430 1.202 5.495 30.393 -3.056 0.993 3.178 10.370 -2.268 30.897 10 DD_DT11DG12:DC6DA7_CC D 11 ? C 7 ? D 12 ? C 6 ? 1 C DG 12 1_555 D DC 6 1_555 C DT 13 1_555 D DA 5 1_555 -0.562 -0.601 3.363 -1.416 -5.439 35.152 -0.156 0.703 3.434 -8.934 2.326 35.584 11 DD_DG12DT13:DA5DC6_CC D 12 ? C 6 ? D 13 ? C 5 ? 1 C DT 13 1_555 D DA 5 1_555 C DT 14 1_555 D DA 4 1_555 -0.593 -0.004 3.355 1.341 -1.920 40.524 0.213 1.007 3.332 -2.769 -1.934 40.588 12 DD_DT13DT14:DA4DA5_CC D 13 ? C 5 ? D 14 ? C 4 ? 1 C DT 14 1_555 D DA 4 1_555 C DC 15 1_555 D DG 3 1_555 0.927 0.202 3.322 -2.172 3.651 35.907 -0.195 -1.804 3.266 5.897 3.507 36.149 13 DD_DT14DC15:DG3DA4_CC D 14 ? C 4 ? D 15 ? C 3 ? 1 D DA 1 1_555 D DA 2 2_656 D DA 2 1_555 D DA 1 2_656 0.000 0.197 3.295 0.000 4.530 23.391 -1.028 0.000 3.274 11.040 0.000 23.820 14 CC_DA1DA2:DA1DA2_CC C 1 ? C 2 ? C 2 ? C 1 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 1,2-ETHANEDIOL EDO 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1GLU _pdbx_initial_refinement_model.details ? #