data_3G9Q # _entry.id 3G9Q # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3G9Q RCSB RCSB051600 WWPDB D_1000051600 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id SR577A _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3G9Q _pdbx_database_status.recvd_initial_deposition_date 2009-02-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Forouhar, F.' 1 'Neely, H.' 2 'Seetharaman, J.' 3 'Janjua, H.' 4 'Mao, L.' 5 'Xiao, R.' 6 'Ciccosanti, C.' 7 'Foote, E.L.' 8 'Lee, D.' 9 'Nair, R.' 10 'Acton, T.B.' 11 'Rost, B.' 12 'Montelione, G.T.' 13 'Tong, L.' 14 'Hunt, J.F.' 15 'Northeast Structural Genomics Consortium (NESG)' 16 # _citation.id primary _citation.title ;Crystal structure of the FhuD fold-family BSU3320, a periplasmic binding protein component of a Fep/Fec-like ferrichrome ABC transporter from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR577A. ; _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Forouhar, F.' 1 primary 'Neely, H.' 2 primary 'Seetharaman, J.' 3 primary 'Janjua, H.' 4 primary 'Mao, L.' 5 primary 'Xiao, R.' 6 primary 'Ciccosanti, C.' 7 primary 'Foote, E.L.' 8 primary 'Lee, D.' 9 primary 'Nair, R.' 10 primary 'Acton, T.B.' 11 primary 'Rost, B.' 12 primary 'Montelione, G.T.' 13 primary 'Tong, L.' 14 primary 'Hunt, J.F.' 15 # _cell.entry_id 3G9Q _cell.length_a 35.517 _cell.length_b 69.898 _cell.length_c 114.169 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3G9Q _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ferrichrome-binding protein' 31236.990 1 ? ? 'UNP residues 45-315' ? 2 water nat water 18.015 31 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;YKAENGNVKIPKHPKRVVV(MSE)ADGYYGYFKTLGINVVGAPENVFKNPYYKGKTNGVENIGDGTSVEKVIDLNPDLII VWTTQGADIKKLEKIAPTVAVKYDKLDNIEQLKEFAK(MSE)TGTEDKAEKWLAKWDKKVAAAKTKIKKAVGDKTISI (MSE)QTNGKDIYVFGKDFGRGGSIIYKDLGLQATKLTKEKAIDQGPGYTSISLEKLPDFAGDYIFAGPWQSGGDDGGVF ESSIWKNLNAVKNGHVYK(MSE)DPIGFYFTDPISLEGQLEFITESLTKLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;YKAENGNVKIPKHPKRVVVMADGYYGYFKTLGINVVGAPENVFKNPYYKGKTNGVENIGDGTSVEKVIDLNPDLIIVWTT QGADIKKLEKIAPTVAVKYDKLDNIEQLKEFAKMTGTEDKAEKWLAKWDKKVAAAKTKIKKAVGDKTISIMQTNGKDIYV FGKDFGRGGSIIYKDLGLQATKLTKEKAIDQGPGYTSISLEKLPDFAGDYIFAGPWQSGGDDGGVFESSIWKNLNAVKNG HVYKMDPIGFYFTDPISLEGQLEFITESLTKLEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier SR577A # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 TYR n 1 2 LYS n 1 3 ALA n 1 4 GLU n 1 5 ASN n 1 6 GLY n 1 7 ASN n 1 8 VAL n 1 9 LYS n 1 10 ILE n 1 11 PRO n 1 12 LYS n 1 13 HIS n 1 14 PRO n 1 15 LYS n 1 16 ARG n 1 17 VAL n 1 18 VAL n 1 19 VAL n 1 20 MSE n 1 21 ALA n 1 22 ASP n 1 23 GLY n 1 24 TYR n 1 25 TYR n 1 26 GLY n 1 27 TYR n 1 28 PHE n 1 29 LYS n 1 30 THR n 1 31 LEU n 1 32 GLY n 1 33 ILE n 1 34 ASN n 1 35 VAL n 1 36 VAL n 1 37 GLY n 1 38 ALA n 1 39 PRO n 1 40 GLU n 1 41 ASN n 1 42 VAL n 1 43 PHE n 1 44 LYS n 1 45 ASN n 1 46 PRO n 1 47 TYR n 1 48 TYR n 1 49 LYS n 1 50 GLY n 1 51 LYS n 1 52 THR n 1 53 ASN n 1 54 GLY n 1 55 VAL n 1 56 GLU n 1 57 ASN n 1 58 ILE n 1 59 GLY n 1 60 ASP n 1 61 GLY n 1 62 THR n 1 63 SER n 1 64 VAL n 1 65 GLU n 1 66 LYS n 1 67 VAL n 1 68 ILE n 1 69 ASP n 1 70 LEU n 1 71 ASN n 1 72 PRO n 1 73 ASP n 1 74 LEU n 1 75 ILE n 1 76 ILE n 1 77 VAL n 1 78 TRP n 1 79 THR n 1 80 THR n 1 81 GLN n 1 82 GLY n 1 83 ALA n 1 84 ASP n 1 85 ILE n 1 86 LYS n 1 87 LYS n 1 88 LEU n 1 89 GLU n 1 90 LYS n 1 91 ILE n 1 92 ALA n 1 93 PRO n 1 94 THR n 1 95 VAL n 1 96 ALA n 1 97 VAL n 1 98 LYS n 1 99 TYR n 1 100 ASP n 1 101 LYS n 1 102 LEU n 1 103 ASP n 1 104 ASN n 1 105 ILE n 1 106 GLU n 1 107 GLN n 1 108 LEU n 1 109 LYS n 1 110 GLU n 1 111 PHE n 1 112 ALA n 1 113 LYS n 1 114 MSE n 1 115 THR n 1 116 GLY n 1 117 THR n 1 118 GLU n 1 119 ASP n 1 120 LYS n 1 121 ALA n 1 122 GLU n 1 123 LYS n 1 124 TRP n 1 125 LEU n 1 126 ALA n 1 127 LYS n 1 128 TRP n 1 129 ASP n 1 130 LYS n 1 131 LYS n 1 132 VAL n 1 133 ALA n 1 134 ALA n 1 135 ALA n 1 136 LYS n 1 137 THR n 1 138 LYS n 1 139 ILE n 1 140 LYS n 1 141 LYS n 1 142 ALA n 1 143 VAL n 1 144 GLY n 1 145 ASP n 1 146 LYS n 1 147 THR n 1 148 ILE n 1 149 SER n 1 150 ILE n 1 151 MSE n 1 152 GLN n 1 153 THR n 1 154 ASN n 1 155 GLY n 1 156 LYS n 1 157 ASP n 1 158 ILE n 1 159 TYR n 1 160 VAL n 1 161 PHE n 1 162 GLY n 1 163 LYS n 1 164 ASP n 1 165 PHE n 1 166 GLY n 1 167 ARG n 1 168 GLY n 1 169 GLY n 1 170 SER n 1 171 ILE n 1 172 ILE n 1 173 TYR n 1 174 LYS n 1 175 ASP n 1 176 LEU n 1 177 GLY n 1 178 LEU n 1 179 GLN n 1 180 ALA n 1 181 THR n 1 182 LYS n 1 183 LEU n 1 184 THR n 1 185 LYS n 1 186 GLU n 1 187 LYS n 1 188 ALA n 1 189 ILE n 1 190 ASP n 1 191 GLN n 1 192 GLY n 1 193 PRO n 1 194 GLY n 1 195 TYR n 1 196 THR n 1 197 SER n 1 198 ILE n 1 199 SER n 1 200 LEU n 1 201 GLU n 1 202 LYS n 1 203 LEU n 1 204 PRO n 1 205 ASP n 1 206 PHE n 1 207 ALA n 1 208 GLY n 1 209 ASP n 1 210 TYR n 1 211 ILE n 1 212 PHE n 1 213 ALA n 1 214 GLY n 1 215 PRO n 1 216 TRP n 1 217 GLN n 1 218 SER n 1 219 GLY n 1 220 GLY n 1 221 ASP n 1 222 ASP n 1 223 GLY n 1 224 GLY n 1 225 VAL n 1 226 PHE n 1 227 GLU n 1 228 SER n 1 229 SER n 1 230 ILE n 1 231 TRP n 1 232 LYS n 1 233 ASN n 1 234 LEU n 1 235 ASN n 1 236 ALA n 1 237 VAL n 1 238 LYS n 1 239 ASN n 1 240 GLY n 1 241 HIS n 1 242 VAL n 1 243 TYR n 1 244 LYS n 1 245 MSE n 1 246 ASP n 1 247 PRO n 1 248 ILE n 1 249 GLY n 1 250 PHE n 1 251 TYR n 1 252 PHE n 1 253 THR n 1 254 ASP n 1 255 PRO n 1 256 ILE n 1 257 SER n 1 258 LEU n 1 259 GLU n 1 260 GLY n 1 261 GLN n 1 262 LEU n 1 263 GLU n 1 264 PHE n 1 265 ILE n 1 266 THR n 1 267 GLU n 1 268 SER n 1 269 LEU n 1 270 THR n 1 271 LYS n 1 272 LEU n 1 273 GLU n 1 274 HIS n 1 275 HIS n 1 276 HIS n 1 277 HIS n 1 278 HIS n 1 279 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BSU33320, fhuD' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 168 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus subtilis subsp. subtilis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 224308 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)+Magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET21 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FHUD_BACSU _struct_ref.pdbx_db_accession P37580 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;YKAENGNVKIPKHPKRVVVMADGYYGYFKTLGINVVGAPENVFKNPYYKGKTNGVENIGDGTSVEKVIDLNPDLIIVWTT QGADIKKLEKIAPTVAVKYDKLDNIEQLKEFAKMTGTEDKAEKWLAKWDKKVAAAKTKIKKAVGDKTISIMQTNGKDIYV FGKDFGRGGSIIYKDLGLQATKLTKEKAIDQGPGYTSISLEKLPDFAGDYIFAGPWQSGGDDGGVFESSIWKNLNAVKNG HVYKMDPIGFYFTDPISLEGQLEFITESLTK ; _struct_ref.pdbx_align_begin 45 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3G9Q _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 271 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P37580 _struct_ref_seq.db_align_beg 45 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 315 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 45 _struct_ref_seq.pdbx_auth_seq_align_end 315 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3G9Q LEU A 272 ? UNP P37580 ? ? 'EXPRESSION TAG' 316 1 1 3G9Q GLU A 273 ? UNP P37580 ? ? 'EXPRESSION TAG' 317 2 1 3G9Q HIS A 274 ? UNP P37580 ? ? 'EXPRESSION TAG' 318 3 1 3G9Q HIS A 275 ? UNP P37580 ? ? 'EXPRESSION TAG' 319 4 1 3G9Q HIS A 276 ? UNP P37580 ? ? 'EXPRESSION TAG' 320 5 1 3G9Q HIS A 277 ? UNP P37580 ? ? 'EXPRESSION TAG' 321 6 1 3G9Q HIS A 278 ? UNP P37580 ? ? 'EXPRESSION TAG' 322 7 1 3G9Q HIS A 279 ? UNP P37580 ? ? 'EXPRESSION TAG' 323 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3G9Q _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.27 _exptl_crystal.density_percent_sol 45.78 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;Protein solution: 10 mM Tris-HCl pH 7.5, 100 mM Sodium chloride, 5 mM DTT. Reservoir solution: 20% PEG 3350, 200 mM NaNO3, VAPOR DIFFUSION, SITTING DROP, temperature 291K ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2009-02-04 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI(111) CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97862 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4C' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4C _diffrn_source.pdbx_wavelength 0.97862 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3G9Q _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.000 _reflns.d_resolution_high 2.600 _reflns.number_obs 16199 _reflns.number_all ? _reflns.percent_possible_obs 96.6 _reflns.pdbx_Rmerge_I_obs 0.07700 _reflns.pdbx_Rsym_value 0.06900 _reflns.pdbx_netI_over_sigmaI 25.8700 _reflns.B_iso_Wilson_estimate 34.80 _reflns.pdbx_redundancy 6.300 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.60 _reflns_shell.d_res_low 2.69 _reflns_shell.percent_possible_all 88.9 _reflns_shell.Rmerge_I_obs 0.21400 _reflns_shell.pdbx_Rsym_value 0.19800 _reflns_shell.meanI_over_sigI_obs 4.900 _reflns_shell.pdbx_redundancy 6.00 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3G9Q _refine.ls_number_reflns_obs 13992 _refine.ls_number_reflns_all 16199 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.000 _refine.pdbx_data_cutoff_high_absF 1160204.830 _refine.pdbx_data_cutoff_low_absF 0.0000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.12 _refine.ls_d_res_high 2.60 _refine.ls_percent_reflns_obs 83.5 _refine.ls_R_factor_obs 0.222 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.222 _refine.ls_R_factor_R_free 0.291 _refine.ls_R_factor_R_free_error 0.008 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.600 _refine.ls_number_reflns_R_free 1349 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 59.30 _refine.aniso_B[1][1] 28.87000 _refine.aniso_B[2][2] -13.52000 _refine.aniso_B[3][3] -15.36000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.30 _refine.solvent_model_param_bsol 21.14 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'PROGRAM XTALVIEW HAS ALSO BEEN USED IN REFINEMENT' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 3G9Q _refine_analyze.Luzzati_coordinate_error_obs 0.36 _refine_analyze.Luzzati_sigma_a_obs 0.45 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.57 _refine_analyze.Luzzati_sigma_a_free 0.63 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2021 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 31 _refine_hist.number_atoms_total 2052 _refine_hist.d_res_high 2.60 _refine_hist.d_res_low 19.12 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.30 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 22.80 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.79 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 2.60 _refine_ls_shell.d_res_low 2.69 _refine_ls_shell.number_reflns_R_work 858 _refine_ls_shell.R_factor_R_work 0.3200 _refine_ls_shell.percent_reflns_obs 55.00 _refine_ls_shell.R_factor_R_free 0.4630 _refine_ls_shell.R_factor_R_free_error 0.051 _refine_ls_shell.percent_reflns_R_free 8.80 _refine_ls_shell.number_reflns_R_free 83 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3G9Q _struct.title ;Crystal structure of the FhuD fold-family BSU3320, a periplasmic binding protein component of a Fep/Fec-like ferrichrome ABC transporter from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR577A ; _struct.pdbx_descriptor 'Ferrichrome-binding protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3G9Q _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text ;alpha-beta protein, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, Cell membrane, Ion transport, Iron, Iron transport, Lipoprotein, Membrane, Palmitate, Transport, TRANSPORT PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 21 ? GLY A 23 ? ALA A 65 GLY A 67 5 ? 3 HELX_P HELX_P2 2 TYR A 24 ? GLY A 32 ? TYR A 68 GLY A 76 1 ? 9 HELX_P HELX_P3 3 PRO A 39 ? LYS A 44 ? PRO A 83 LYS A 88 5 ? 6 HELX_P HELX_P4 4 SER A 63 ? ASP A 69 ? SER A 107 ASP A 113 1 ? 7 HELX_P HELX_P5 5 ASP A 84 ? ALA A 92 ? ASP A 128 ALA A 136 1 ? 9 HELX_P HELX_P6 6 ILE A 105 ? GLY A 116 ? ILE A 149 GLY A 160 1 ? 12 HELX_P HELX_P7 7 THR A 117 ? GLY A 144 ? THR A 161 GLY A 188 1 ? 28 HELX_P HELX_P8 8 GLY A 168 ? LYS A 174 ? GLY A 212 LYS A 218 1 ? 7 HELX_P HELX_P9 9 THR A 181 ? ILE A 189 ? THR A 225 ILE A 233 1 ? 9 HELX_P HELX_P10 10 LYS A 202 ? ALA A 207 ? LYS A 246 ALA A 251 1 ? 6 HELX_P HELX_P11 11 SER A 228 ? ASN A 233 ? SER A 272 ASN A 277 1 ? 6 HELX_P HELX_P12 12 LEU A 234 ? ASN A 239 ? LEU A 278 ASN A 283 1 ? 6 HELX_P HELX_P13 13 ILE A 248 ? PHE A 252 ? ILE A 292 PHE A 296 5 ? 5 HELX_P HELX_P14 14 ASP A 254 ? LYS A 271 ? ASP A 298 LYS A 315 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A VAL 19 C ? ? ? 1_555 A MSE 20 N ? ? A VAL 63 A MSE 64 1_555 ? ? ? ? ? ? ? 1.326 ? covale2 covale ? ? A MSE 20 C ? ? ? 1_555 A ALA 21 N ? ? A MSE 64 A ALA 65 1_555 ? ? ? ? ? ? ? 1.331 ? covale3 covale ? ? A LYS 113 C ? ? ? 1_555 A MSE 114 N ? ? A LYS 157 A MSE 158 1_555 ? ? ? ? ? ? ? 1.326 ? covale4 covale ? ? A MSE 114 C ? ? ? 1_555 A THR 115 N ? ? A MSE 158 A THR 159 1_555 ? ? ? ? ? ? ? 1.328 ? covale5 covale ? ? A ILE 150 C ? ? ? 1_555 A MSE 151 N ? ? A ILE 194 A MSE 195 1_555 ? ? ? ? ? ? ? 1.328 ? covale6 covale ? ? A MSE 151 C ? ? ? 1_555 A GLN 152 N ? ? A MSE 195 A GLN 196 1_555 ? ? ? ? ? ? ? 1.329 ? covale7 covale ? ? A LYS 244 C ? ? ? 1_555 A MSE 245 N ? ? A LYS 288 A MSE 289 1_555 ? ? ? ? ? ? ? 1.327 ? covale8 covale ? ? A MSE 245 C ? ? ? 1_555 A ASP 246 N ? ? A MSE 289 A ASP 290 1_555 ? ? ? ? ? ? ? 1.324 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 35 ? GLY A 37 ? VAL A 79 GLY A 81 A 2 VAL A 17 ? VAL A 19 ? VAL A 61 VAL A 63 A 3 LEU A 74 ? TRP A 78 ? LEU A 118 TRP A 122 A 4 THR A 94 ? VAL A 97 ? THR A 138 VAL A 141 B 1 TYR A 195 ? ILE A 198 ? TYR A 239 ILE A 242 B 2 ASP A 157 ? PHE A 161 ? ASP A 201 PHE A 205 B 3 ILE A 148 ? ASN A 154 ? ILE A 192 ASN A 198 B 4 TYR A 210 ? PRO A 215 ? TYR A 254 PRO A 259 B 5 VAL A 242 ? LYS A 244 ? VAL A 286 LYS A 288 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 36 ? O VAL A 80 N VAL A 17 ? N VAL A 61 A 2 3 N VAL A 18 ? N VAL A 62 O ILE A 76 ? O ILE A 120 A 3 4 N ILE A 75 ? N ILE A 119 O VAL A 95 ? O VAL A 139 B 1 2 O ILE A 198 ? O ILE A 242 N ILE A 158 ? N ILE A 202 B 2 3 O TYR A 159 ? O TYR A 203 N GLN A 152 ? N GLN A 196 B 3 4 N SER A 149 ? N SER A 193 O TYR A 210 ? O TYR A 254 B 4 5 N ILE A 211 ? N ILE A 255 O TYR A 243 ? O TYR A 287 # _database_PDB_matrix.entry_id 3G9Q _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3G9Q _atom_sites.fract_transf_matrix[1][1] 0.028156 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014307 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008759 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 TYR 1 45 ? ? ? A . n A 1 2 LYS 2 46 ? ? ? A . n A 1 3 ALA 3 47 ? ? ? A . n A 1 4 GLU 4 48 ? ? ? A . n A 1 5 ASN 5 49 ? ? ? A . n A 1 6 GLY 6 50 ? ? ? A . n A 1 7 ASN 7 51 ? ? ? A . n A 1 8 VAL 8 52 ? ? ? A . n A 1 9 LYS 9 53 ? ? ? A . n A 1 10 ILE 10 54 54 ILE ILE A . n A 1 11 PRO 11 55 55 PRO PRO A . n A 1 12 LYS 12 56 56 LYS LYS A . n A 1 13 HIS 13 57 57 HIS HIS A . n A 1 14 PRO 14 58 58 PRO PRO A . n A 1 15 LYS 15 59 59 LYS LYS A . n A 1 16 ARG 16 60 60 ARG ARG A . n A 1 17 VAL 17 61 61 VAL VAL A . n A 1 18 VAL 18 62 62 VAL VAL A . n A 1 19 VAL 19 63 63 VAL VAL A . n A 1 20 MSE 20 64 64 MSE MSE A . n A 1 21 ALA 21 65 65 ALA ALA A . n A 1 22 ASP 22 66 66 ASP ASP A . n A 1 23 GLY 23 67 67 GLY GLY A . n A 1 24 TYR 24 68 68 TYR TYR A . n A 1 25 TYR 25 69 69 TYR TYR A . n A 1 26 GLY 26 70 70 GLY GLY A . n A 1 27 TYR 27 71 71 TYR TYR A . n A 1 28 PHE 28 72 72 PHE PHE A . n A 1 29 LYS 29 73 73 LYS LYS A . n A 1 30 THR 30 74 74 THR THR A . n A 1 31 LEU 31 75 75 LEU LEU A . n A 1 32 GLY 32 76 76 GLY GLY A . n A 1 33 ILE 33 77 77 ILE ILE A . n A 1 34 ASN 34 78 78 ASN ASN A . n A 1 35 VAL 35 79 79 VAL VAL A . n A 1 36 VAL 36 80 80 VAL VAL A . n A 1 37 GLY 37 81 81 GLY GLY A . n A 1 38 ALA 38 82 82 ALA ALA A . n A 1 39 PRO 39 83 83 PRO PRO A . n A 1 40 GLU 40 84 84 GLU GLU A . n A 1 41 ASN 41 85 85 ASN ASN A . n A 1 42 VAL 42 86 86 VAL VAL A . n A 1 43 PHE 43 87 87 PHE PHE A . n A 1 44 LYS 44 88 88 LYS LYS A . n A 1 45 ASN 45 89 89 ASN ASN A . n A 1 46 PRO 46 90 90 PRO PRO A . n A 1 47 TYR 47 91 91 TYR TYR A . n A 1 48 TYR 48 92 92 TYR TYR A . n A 1 49 LYS 49 93 93 LYS LYS A . n A 1 50 GLY 50 94 94 GLY GLY A . n A 1 51 LYS 51 95 95 LYS LYS A . n A 1 52 THR 52 96 96 THR THR A . n A 1 53 ASN 53 97 97 ASN ASN A . n A 1 54 GLY 54 98 98 GLY GLY A . n A 1 55 VAL 55 99 99 VAL VAL A . n A 1 56 GLU 56 100 100 GLU GLU A . n A 1 57 ASN 57 101 101 ASN ASN A . n A 1 58 ILE 58 102 102 ILE ILE A . n A 1 59 GLY 59 103 103 GLY GLY A . n A 1 60 ASP 60 104 104 ASP ASP A . n A 1 61 GLY 61 105 105 GLY GLY A . n A 1 62 THR 62 106 106 THR THR A . n A 1 63 SER 63 107 107 SER SER A . n A 1 64 VAL 64 108 108 VAL VAL A . n A 1 65 GLU 65 109 109 GLU GLU A . n A 1 66 LYS 66 110 110 LYS LYS A . n A 1 67 VAL 67 111 111 VAL VAL A . n A 1 68 ILE 68 112 112 ILE ILE A . n A 1 69 ASP 69 113 113 ASP ASP A . n A 1 70 LEU 70 114 114 LEU LEU A . n A 1 71 ASN 71 115 115 ASN ASN A . n A 1 72 PRO 72 116 116 PRO PRO A . n A 1 73 ASP 73 117 117 ASP ASP A . n A 1 74 LEU 74 118 118 LEU LEU A . n A 1 75 ILE 75 119 119 ILE ILE A . n A 1 76 ILE 76 120 120 ILE ILE A . n A 1 77 VAL 77 121 121 VAL VAL A . n A 1 78 TRP 78 122 122 TRP TRP A . n A 1 79 THR 79 123 123 THR THR A . n A 1 80 THR 80 124 124 THR THR A . n A 1 81 GLN 81 125 ? ? ? A . n A 1 82 GLY 82 126 ? ? ? A . n A 1 83 ALA 83 127 127 ALA ALA A . n A 1 84 ASP 84 128 128 ASP ASP A . n A 1 85 ILE 85 129 129 ILE ILE A . n A 1 86 LYS 86 130 130 LYS LYS A . n A 1 87 LYS 87 131 131 LYS LYS A . n A 1 88 LEU 88 132 132 LEU LEU A . n A 1 89 GLU 89 133 133 GLU GLU A . n A 1 90 LYS 90 134 134 LYS LYS A . n A 1 91 ILE 91 135 135 ILE ILE A . n A 1 92 ALA 92 136 136 ALA ALA A . n A 1 93 PRO 93 137 137 PRO PRO A . n A 1 94 THR 94 138 138 THR THR A . n A 1 95 VAL 95 139 139 VAL VAL A . n A 1 96 ALA 96 140 140 ALA ALA A . n A 1 97 VAL 97 141 141 VAL VAL A . n A 1 98 LYS 98 142 142 LYS LYS A . n A 1 99 TYR 99 143 143 TYR TYR A . n A 1 100 ASP 100 144 144 ASP ASP A . n A 1 101 LYS 101 145 145 LYS LYS A . n A 1 102 LEU 102 146 146 LEU LEU A . n A 1 103 ASP 103 147 147 ASP ASP A . n A 1 104 ASN 104 148 148 ASN ASN A . n A 1 105 ILE 105 149 149 ILE ILE A . n A 1 106 GLU 106 150 150 GLU GLU A . n A 1 107 GLN 107 151 151 GLN GLN A . n A 1 108 LEU 108 152 152 LEU LEU A . n A 1 109 LYS 109 153 153 LYS LYS A . n A 1 110 GLU 110 154 154 GLU GLU A . n A 1 111 PHE 111 155 155 PHE PHE A . n A 1 112 ALA 112 156 156 ALA ALA A . n A 1 113 LYS 113 157 157 LYS LYS A . n A 1 114 MSE 114 158 158 MSE MSE A . n A 1 115 THR 115 159 159 THR THR A . n A 1 116 GLY 116 160 160 GLY GLY A . n A 1 117 THR 117 161 161 THR THR A . n A 1 118 GLU 118 162 162 GLU GLU A . n A 1 119 ASP 119 163 163 ASP ASP A . n A 1 120 LYS 120 164 164 LYS LYS A . n A 1 121 ALA 121 165 165 ALA ALA A . n A 1 122 GLU 122 166 166 GLU GLU A . n A 1 123 LYS 123 167 167 LYS LYS A . n A 1 124 TRP 124 168 168 TRP TRP A . n A 1 125 LEU 125 169 169 LEU LEU A . n A 1 126 ALA 126 170 170 ALA ALA A . n A 1 127 LYS 127 171 171 LYS LYS A . n A 1 128 TRP 128 172 172 TRP TRP A . n A 1 129 ASP 129 173 173 ASP ASP A . n A 1 130 LYS 130 174 174 LYS LYS A . n A 1 131 LYS 131 175 175 LYS LYS A . n A 1 132 VAL 132 176 176 VAL VAL A . n A 1 133 ALA 133 177 177 ALA ALA A . n A 1 134 ALA 134 178 178 ALA ALA A . n A 1 135 ALA 135 179 179 ALA ALA A . n A 1 136 LYS 136 180 180 LYS LYS A . n A 1 137 THR 137 181 181 THR THR A . n A 1 138 LYS 138 182 182 LYS LYS A . n A 1 139 ILE 139 183 183 ILE ILE A . n A 1 140 LYS 140 184 184 LYS LYS A . n A 1 141 LYS 141 185 185 LYS LYS A . n A 1 142 ALA 142 186 186 ALA ALA A . n A 1 143 VAL 143 187 187 VAL VAL A . n A 1 144 GLY 144 188 188 GLY GLY A . n A 1 145 ASP 145 189 189 ASP ASP A . n A 1 146 LYS 146 190 190 LYS LYS A . n A 1 147 THR 147 191 191 THR THR A . n A 1 148 ILE 148 192 192 ILE ILE A . n A 1 149 SER 149 193 193 SER SER A . n A 1 150 ILE 150 194 194 ILE ILE A . n A 1 151 MSE 151 195 195 MSE MSE A . n A 1 152 GLN 152 196 196 GLN GLN A . n A 1 153 THR 153 197 197 THR THR A . n A 1 154 ASN 154 198 198 ASN ASN A . n A 1 155 GLY 155 199 199 GLY GLY A . n A 1 156 LYS 156 200 200 LYS LYS A . n A 1 157 ASP 157 201 201 ASP ASP A . n A 1 158 ILE 158 202 202 ILE ILE A . n A 1 159 TYR 159 203 203 TYR TYR A . n A 1 160 VAL 160 204 204 VAL VAL A . n A 1 161 PHE 161 205 205 PHE PHE A . n A 1 162 GLY 162 206 206 GLY GLY A . n A 1 163 LYS 163 207 207 LYS LYS A . n A 1 164 ASP 164 208 208 ASP ASP A . n A 1 165 PHE 165 209 209 PHE PHE A . n A 1 166 GLY 166 210 210 GLY GLY A . n A 1 167 ARG 167 211 211 ARG ARG A . n A 1 168 GLY 168 212 212 GLY GLY A . n A 1 169 GLY 169 213 213 GLY GLY A . n A 1 170 SER 170 214 214 SER SER A . n A 1 171 ILE 171 215 215 ILE ILE A . n A 1 172 ILE 172 216 216 ILE ILE A . n A 1 173 TYR 173 217 217 TYR TYR A . n A 1 174 LYS 174 218 218 LYS LYS A . n A 1 175 ASP 175 219 219 ASP ASP A . n A 1 176 LEU 176 220 220 LEU LEU A . n A 1 177 GLY 177 221 221 GLY GLY A . n A 1 178 LEU 178 222 222 LEU LEU A . n A 1 179 GLN 179 223 223 GLN GLN A . n A 1 180 ALA 180 224 224 ALA ALA A . n A 1 181 THR 181 225 225 THR THR A . n A 1 182 LYS 182 226 226 LYS LYS A . n A 1 183 LEU 183 227 227 LEU LEU A . n A 1 184 THR 184 228 228 THR THR A . n A 1 185 LYS 185 229 229 LYS LYS A . n A 1 186 GLU 186 230 230 GLU GLU A . n A 1 187 LYS 187 231 231 LYS LYS A . n A 1 188 ALA 188 232 232 ALA ALA A . n A 1 189 ILE 189 233 233 ILE ILE A . n A 1 190 ASP 190 234 234 ASP ASP A . n A 1 191 GLN 191 235 235 GLN GLN A . n A 1 192 GLY 192 236 236 GLY GLY A . n A 1 193 PRO 193 237 237 PRO PRO A . n A 1 194 GLY 194 238 238 GLY GLY A . n A 1 195 TYR 195 239 239 TYR TYR A . n A 1 196 THR 196 240 240 THR THR A . n A 1 197 SER 197 241 241 SER SER A . n A 1 198 ILE 198 242 242 ILE ILE A . n A 1 199 SER 199 243 243 SER SER A . n A 1 200 LEU 200 244 244 LEU LEU A . n A 1 201 GLU 201 245 245 GLU GLU A . n A 1 202 LYS 202 246 246 LYS LYS A . n A 1 203 LEU 203 247 247 LEU LEU A . n A 1 204 PRO 204 248 248 PRO PRO A . n A 1 205 ASP 205 249 249 ASP ASP A . n A 1 206 PHE 206 250 250 PHE PHE A . n A 1 207 ALA 207 251 251 ALA ALA A . n A 1 208 GLY 208 252 252 GLY GLY A . n A 1 209 ASP 209 253 253 ASP ASP A . n A 1 210 TYR 210 254 254 TYR TYR A . n A 1 211 ILE 211 255 255 ILE ILE A . n A 1 212 PHE 212 256 256 PHE PHE A . n A 1 213 ALA 213 257 257 ALA ALA A . n A 1 214 GLY 214 258 258 GLY GLY A . n A 1 215 PRO 215 259 259 PRO PRO A . n A 1 216 TRP 216 260 260 TRP TRP A . n A 1 217 GLN 217 261 261 GLN GLN A . n A 1 218 SER 218 262 262 SER SER A . n A 1 219 GLY 219 263 ? ? ? A . n A 1 220 GLY 220 264 ? ? ? A . n A 1 221 ASP 221 265 ? ? ? A . n A 1 222 ASP 222 266 ? ? ? A . n A 1 223 GLY 223 267 267 GLY GLY A . n A 1 224 GLY 224 268 268 GLY GLY A . n A 1 225 VAL 225 269 269 VAL VAL A . n A 1 226 PHE 226 270 270 PHE PHE A . n A 1 227 GLU 227 271 271 GLU GLU A . n A 1 228 SER 228 272 272 SER SER A . n A 1 229 SER 229 273 273 SER SER A . n A 1 230 ILE 230 274 274 ILE ILE A . n A 1 231 TRP 231 275 275 TRP TRP A . n A 1 232 LYS 232 276 276 LYS LYS A . n A 1 233 ASN 233 277 277 ASN ASN A . n A 1 234 LEU 234 278 278 LEU LEU A . n A 1 235 ASN 235 279 279 ASN ASN A . n A 1 236 ALA 236 280 280 ALA ALA A . n A 1 237 VAL 237 281 281 VAL VAL A . n A 1 238 LYS 238 282 282 LYS LYS A . n A 1 239 ASN 239 283 283 ASN ASN A . n A 1 240 GLY 240 284 284 GLY GLY A . n A 1 241 HIS 241 285 285 HIS HIS A . n A 1 242 VAL 242 286 286 VAL VAL A . n A 1 243 TYR 243 287 287 TYR TYR A . n A 1 244 LYS 244 288 288 LYS LYS A . n A 1 245 MSE 245 289 289 MSE MSE A . n A 1 246 ASP 246 290 290 ASP ASP A . n A 1 247 PRO 247 291 291 PRO PRO A . n A 1 248 ILE 248 292 292 ILE ILE A . n A 1 249 GLY 249 293 293 GLY GLY A . n A 1 250 PHE 250 294 294 PHE PHE A . n A 1 251 TYR 251 295 295 TYR TYR A . n A 1 252 PHE 252 296 296 PHE PHE A . n A 1 253 THR 253 297 297 THR THR A . n A 1 254 ASP 254 298 298 ASP ASP A . n A 1 255 PRO 255 299 299 PRO PRO A . n A 1 256 ILE 256 300 300 ILE ILE A . n A 1 257 SER 257 301 301 SER SER A . n A 1 258 LEU 258 302 302 LEU LEU A . n A 1 259 GLU 259 303 303 GLU GLU A . n A 1 260 GLY 260 304 304 GLY GLY A . n A 1 261 GLN 261 305 305 GLN GLN A . n A 1 262 LEU 262 306 306 LEU LEU A . n A 1 263 GLU 263 307 307 GLU GLU A . n A 1 264 PHE 264 308 308 PHE PHE A . n A 1 265 ILE 265 309 309 ILE ILE A . n A 1 266 THR 266 310 310 THR THR A . n A 1 267 GLU 267 311 311 GLU GLU A . n A 1 268 SER 268 312 312 SER SER A . n A 1 269 LEU 269 313 313 LEU LEU A . n A 1 270 THR 270 314 314 THR THR A . n A 1 271 LYS 271 315 315 LYS LYS A . n A 1 272 LEU 272 316 316 LEU LEU A . n A 1 273 GLU 273 317 317 GLU GLU A . n A 1 274 HIS 274 318 ? ? ? A . n A 1 275 HIS 275 319 ? ? ? A . n A 1 276 HIS 276 320 ? ? ? A . n A 1 277 HIS 277 321 ? ? ? A . n A 1 278 HIS 278 322 ? ? ? A . n A 1 279 HIS 279 323 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Northeast Structural Genomics Consortium' _pdbx_SG_project.initial_of_center NESG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 401 401 HOH HOH A . B 2 HOH 2 402 402 HOH HOH A . B 2 HOH 3 403 403 HOH HOH A . B 2 HOH 4 404 404 HOH HOH A . B 2 HOH 5 405 405 HOH HOH A . B 2 HOH 6 406 406 HOH HOH A . B 2 HOH 7 407 407 HOH HOH A . B 2 HOH 8 408 408 HOH HOH A . B 2 HOH 9 409 409 HOH HOH A . B 2 HOH 10 410 410 HOH HOH A . B 2 HOH 11 411 411 HOH HOH A . B 2 HOH 12 412 412 HOH HOH A . B 2 HOH 13 413 413 HOH HOH A . B 2 HOH 14 414 414 HOH HOH A . B 2 HOH 15 415 415 HOH HOH A . B 2 HOH 16 416 416 HOH HOH A . B 2 HOH 17 417 417 HOH HOH A . B 2 HOH 18 418 418 HOH HOH A . B 2 HOH 19 419 419 HOH HOH A . B 2 HOH 20 420 420 HOH HOH A . B 2 HOH 21 421 421 HOH HOH A . B 2 HOH 22 422 422 HOH HOH A . B 2 HOH 23 423 423 HOH HOH A . B 2 HOH 24 424 424 HOH HOH A . B 2 HOH 25 425 425 HOH HOH A . B 2 HOH 26 426 426 HOH HOH A . B 2 HOH 27 427 427 HOH HOH A . B 2 HOH 28 428 428 HOH HOH A . B 2 HOH 29 429 429 HOH HOH A . B 2 HOH 30 430 430 HOH HOH A . B 2 HOH 31 431 431 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 20 A MSE 64 ? MET SELENOMETHIONINE 2 A MSE 114 A MSE 158 ? MET SELENOMETHIONINE 3 A MSE 151 A MSE 195 ? MET SELENOMETHIONINE 4 A MSE 245 A MSE 289 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-03-03 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Source and taxonomy' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 SnB phasing . ? 2 SOLVE phasing . ? 3 RESOLVE 'model building' . ? 4 CNS refinement 1.2 ? 5 HKL-2000 'data reduction' . ? 6 SCALEPACK 'data scaling' . ? 7 RESOLVE phasing . ? 8 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CE _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 LYS _pdbx_validate_rmsd_bond.auth_seq_id_1 131 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 NZ _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 LYS _pdbx_validate_rmsd_bond.auth_seq_id_2 131 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.335 _pdbx_validate_rmsd_bond.bond_target_value 1.486 _pdbx_validate_rmsd_bond.bond_deviation -0.151 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.025 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 92 ? ? -101.78 -86.24 2 1 LYS A 95 ? ? -176.52 -7.11 3 1 ASN A 97 ? ? -149.69 -19.69 4 1 VAL A 99 ? ? -105.32 48.61 5 1 ILE A 102 ? ? -92.89 -145.72 6 1 THR A 106 ? ? -126.54 -50.09 7 1 SER A 107 ? ? -52.24 91.79 8 1 ASN A 115 ? ? 19.93 76.24 9 1 ASP A 147 ? ? -46.52 -79.94 10 1 ASN A 148 ? ? 176.65 -46.96 11 1 ASN A 198 ? ? -156.26 86.42 12 1 PHE A 209 ? ? -150.06 29.54 13 1 ILE A 233 ? ? -121.28 -82.27 14 1 ASP A 234 ? ? -58.10 11.03 15 1 GLN A 235 ? ? -146.29 -79.40 16 1 ALA A 251 ? ? -39.89 123.72 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 226 ? CD ? A LYS 182 CD 2 1 Y 1 A LYS 226 ? CE ? A LYS 182 CE 3 1 Y 1 A LYS 226 ? NZ ? A LYS 182 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A TYR 45 ? A TYR 1 2 1 Y 1 A LYS 46 ? A LYS 2 3 1 Y 1 A ALA 47 ? A ALA 3 4 1 Y 1 A GLU 48 ? A GLU 4 5 1 Y 1 A ASN 49 ? A ASN 5 6 1 Y 1 A GLY 50 ? A GLY 6 7 1 Y 1 A ASN 51 ? A ASN 7 8 1 Y 1 A VAL 52 ? A VAL 8 9 1 Y 1 A LYS 53 ? A LYS 9 10 1 Y 1 A GLN 125 ? A GLN 81 11 1 Y 1 A GLY 126 ? A GLY 82 12 1 Y 1 A GLY 263 ? A GLY 219 13 1 Y 1 A GLY 264 ? A GLY 220 14 1 Y 1 A ASP 265 ? A ASP 221 15 1 Y 1 A ASP 266 ? A ASP 222 16 1 Y 1 A HIS 318 ? A HIS 274 17 1 Y 1 A HIS 319 ? A HIS 275 18 1 Y 1 A HIS 320 ? A HIS 276 19 1 Y 1 A HIS 321 ? A HIS 277 20 1 Y 1 A HIS 322 ? A HIS 278 21 1 Y 1 A HIS 323 ? A HIS 279 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #