data_3GAL # _entry.id 3GAL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3GAL pdb_00003gal 10.2210/pdb3gal/pdb WWPDB D_1000178972 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-11-04 2 'Structure model' 1 1 2008-03-25 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-11-16 5 'Structure model' 1 4 2020-07-29 6 'Structure model' 1 5 2024-02-21 7 'Structure model' 1 6 2024-04-03 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Derived calculations' 6 5 'Structure model' Other 7 5 'Structure model' 'Structure summary' 8 6 'Structure model' 'Data collection' 9 6 'Structure model' 'Database references' 10 6 'Structure model' 'Structure summary' 11 7 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp 2 5 'Structure model' diffrn_source 3 5 'Structure model' entity 4 5 'Structure model' pdbx_chem_comp_identifier 5 5 'Structure model' pdbx_database_status 6 5 'Structure model' pdbx_entity_nonpoly 7 5 'Structure model' struct_site 8 5 'Structure model' struct_site_gen 9 6 'Structure model' chem_comp 10 6 'Structure model' chem_comp_atom 11 6 'Structure model' chem_comp_bond 12 6 'Structure model' database_2 13 7 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_chem_comp.name' 2 5 'Structure model' '_chem_comp.type' 3 5 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 4 5 'Structure model' '_entity.pdbx_description' 5 5 'Structure model' '_pdbx_database_status.process_site' 6 5 'Structure model' '_pdbx_entity_nonpoly.name' 7 6 'Structure model' '_chem_comp.pdbx_synonyms' 8 6 'Structure model' '_database_2.pdbx_DOI' 9 6 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3GAL _pdbx_database_status.recvd_initial_deposition_date 1998-07-13 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Leonidas, D.D.' 1 'Acharya, K.R.' 2 # _citation.id primary _citation.title 'Structural basis for the recognition of carbohydrates by human galectin-7.' _citation.journal_abbrev Biochemistry _citation.journal_volume 37 _citation.page_first 13930 _citation.page_last 13940 _citation.year 1998 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9760227 _citation.pdbx_database_id_DOI 10.1021/bi981056x # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Leonidas, D.D.' 1 ? primary 'Vatzaki, E.H.' 2 ? primary 'Vorum, H.' 3 ? primary 'Celis, J.E.' 4 ? primary 'Madsen, P.' 5 ? primary 'Acharya, K.R.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man GALECTIN-7 14965.850 2 ? ? ? ? 2 non-polymer man 2-amino-2-deoxy-beta-D-galactopyranose 179.171 2 ? ? ? ? 3 water nat water 18.015 87 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SNVPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERGPGVPF QRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVRLVEVGGDVQLDSVRIF ; _entity_poly.pdbx_seq_one_letter_code_can ;SNVPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERGPGVPF QRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVRLVEVGGDVQLDSVRIF ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-amino-2-deoxy-beta-D-galactopyranose 1GN 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 VAL n 1 4 PRO n 1 5 HIS n 1 6 LYS n 1 7 SER n 1 8 SER n 1 9 LEU n 1 10 PRO n 1 11 GLU n 1 12 GLY n 1 13 ILE n 1 14 ARG n 1 15 PRO n 1 16 GLY n 1 17 THR n 1 18 VAL n 1 19 LEU n 1 20 ARG n 1 21 ILE n 1 22 ARG n 1 23 GLY n 1 24 LEU n 1 25 VAL n 1 26 PRO n 1 27 PRO n 1 28 ASN n 1 29 ALA n 1 30 SER n 1 31 ARG n 1 32 PHE n 1 33 HIS n 1 34 VAL n 1 35 ASN n 1 36 LEU n 1 37 LEU n 1 38 CYS n 1 39 GLY n 1 40 GLU n 1 41 GLU n 1 42 GLN n 1 43 GLY n 1 44 SER n 1 45 ASP n 1 46 ALA n 1 47 ALA n 1 48 LEU n 1 49 HIS n 1 50 PHE n 1 51 ASN n 1 52 PRO n 1 53 ARG n 1 54 LEU n 1 55 ASP n 1 56 THR n 1 57 SER n 1 58 GLU n 1 59 VAL n 1 60 VAL n 1 61 PHE n 1 62 ASN n 1 63 SER n 1 64 LYS n 1 65 GLU n 1 66 GLN n 1 67 GLY n 1 68 SER n 1 69 TRP n 1 70 GLY n 1 71 ARG n 1 72 GLU n 1 73 GLU n 1 74 ARG n 1 75 GLY n 1 76 PRO n 1 77 GLY n 1 78 VAL n 1 79 PRO n 1 80 PHE n 1 81 GLN n 1 82 ARG n 1 83 GLY n 1 84 GLN n 1 85 PRO n 1 86 PHE n 1 87 GLU n 1 88 VAL n 1 89 LEU n 1 90 ILE n 1 91 ILE n 1 92 ALA n 1 93 SER n 1 94 ASP n 1 95 ASP n 1 96 GLY n 1 97 PHE n 1 98 LYS n 1 99 ALA n 1 100 VAL n 1 101 VAL n 1 102 GLY n 1 103 ASP n 1 104 ALA n 1 105 GLN n 1 106 TYR n 1 107 HIS n 1 108 HIS n 1 109 PHE n 1 110 ARG n 1 111 HIS n 1 112 ARG n 1 113 LEU n 1 114 PRO n 1 115 LEU n 1 116 ALA n 1 117 ARG n 1 118 VAL n 1 119 ARG n 1 120 LEU n 1 121 VAL n 1 122 GLU n 1 123 VAL n 1 124 GLY n 1 125 GLY n 1 126 ASP n 1 127 VAL n 1 128 GLN n 1 129 LEU n 1 130 ASP n 1 131 SER n 1 132 VAL n 1 133 ARG n 1 134 ILE n 1 135 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line BL21 _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name BL21 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 1GN 'D-saccharide, beta linking' . 2-amino-2-deoxy-beta-D-galactopyranose ;beta-D-galactosamine; 2-amino-2-deoxy-beta-D-galactose; 2-amino-2-deoxy-D-galactose; 2-amino-2-deoxy-galactose; 2-DEOXY-2-AMINOGALACTOSE ; 'C6 H13 N O5' 179.171 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 1GN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpNb 1GN 'COMMON NAME' GMML 1.0 b-D-galactopyranosamine 1GN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GalpN 1GN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GalN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 ? ? ? A . n A 1 2 ASN 2 2 2 ASN ASN A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 HIS 5 5 5 HIS HIS A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 PRO 15 15 15 PRO PRO A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 THR 17 17 17 THR THR A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 ARG 20 20 20 ARG ARG A . n A 1 21 ILE 21 21 21 ILE ILE A . n A 1 22 ARG 22 22 22 ARG ARG A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 PRO 26 26 26 PRO PRO A . n A 1 27 PRO 27 27 27 PRO PRO A . n A 1 28 ASN 28 28 28 ASN ASN A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 ARG 31 31 31 ARG ARG A . n A 1 32 PHE 32 32 32 PHE PHE A . n A 1 33 HIS 33 33 33 HIS HIS A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 ASN 35 35 35 ASN ASN A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 CYS 38 38 38 CYS CYS A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 GLU 41 41 41 GLU GLU A . n A 1 42 GLN 42 42 42 GLN GLN A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 ASP 45 45 45 ASP ASP A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 HIS 49 49 49 HIS HIS A . n A 1 50 PHE 50 50 50 PHE PHE A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 PRO 52 52 52 PRO PRO A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 THR 56 56 56 THR THR A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 PHE 61 61 61 PHE PHE A . n A 1 62 ASN 62 62 62 ASN ASN A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 GLN 66 66 66 GLN GLN A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 SER 68 68 68 SER SER A . n A 1 69 TRP 69 69 69 TRP TRP A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 GLU 72 72 72 GLU GLU A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 GLY 75 75 75 GLY GLY A . n A 1 76 PRO 76 76 76 PRO PRO A . n A 1 77 GLY 77 77 77 GLY GLY A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 PHE 80 80 80 PHE PHE A . n A 1 81 GLN 81 81 81 GLN GLN A . n A 1 82 ARG 82 82 82 ARG ARG A . n A 1 83 GLY 83 83 83 GLY GLY A . n A 1 84 GLN 84 84 84 GLN GLN A . n A 1 85 PRO 85 85 85 PRO PRO A . n A 1 86 PHE 86 86 86 PHE PHE A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 ILE 90 90 90 ILE ILE A . n A 1 91 ILE 91 91 91 ILE ILE A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 SER 93 93 93 SER SER A . n A 1 94 ASP 94 94 94 ASP ASP A . n A 1 95 ASP 95 95 95 ASP ASP A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 PHE 97 97 97 PHE PHE A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 ASP 103 103 103 ASP ASP A . n A 1 104 ALA 104 104 104 ALA ALA A . n A 1 105 GLN 105 105 105 GLN GLN A . n A 1 106 TYR 106 106 106 TYR TYR A . n A 1 107 HIS 107 107 107 HIS HIS A . n A 1 108 HIS 108 108 108 HIS HIS A . n A 1 109 PHE 109 109 109 PHE PHE A . n A 1 110 ARG 110 110 110 ARG ARG A . n A 1 111 HIS 111 111 111 HIS HIS A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 LEU 113 113 113 LEU LEU A . n A 1 114 PRO 114 114 114 PRO PRO A . n A 1 115 LEU 115 115 115 LEU LEU A . n A 1 116 ALA 116 116 116 ALA ALA A . n A 1 117 ARG 117 117 117 ARG ARG A . n A 1 118 VAL 118 118 118 VAL VAL A . n A 1 119 ARG 119 119 119 ARG ARG A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 VAL 121 121 121 VAL VAL A . n A 1 122 GLU 122 122 122 GLU GLU A . n A 1 123 VAL 123 123 123 VAL VAL A . n A 1 124 GLY 124 124 124 GLY GLY A . n A 1 125 GLY 125 125 125 GLY GLY A . n A 1 126 ASP 126 126 126 ASP ASP A . n A 1 127 VAL 127 127 127 VAL VAL A . n A 1 128 GLN 128 128 128 GLN GLN A . n A 1 129 LEU 129 129 129 LEU LEU A . n A 1 130 ASP 130 130 130 ASP ASP A . n A 1 131 SER 131 131 131 SER SER A . n A 1 132 VAL 132 132 132 VAL VAL A . n A 1 133 ARG 133 133 133 ARG ARG A . n A 1 134 ILE 134 134 134 ILE ILE A . n A 1 135 PHE 135 135 135 PHE PHE A . n B 1 1 SER 1 1 1 SER SER B . n B 1 2 ASN 2 2 2 ASN ASN B . n B 1 3 VAL 3 3 3 VAL VAL B . n B 1 4 PRO 4 4 4 PRO PRO B . n B 1 5 HIS 5 5 5 HIS HIS B . n B 1 6 LYS 6 6 6 LYS LYS B . n B 1 7 SER 7 7 7 SER SER B . n B 1 8 SER 8 8 8 SER SER B . n B 1 9 LEU 9 9 9 LEU LEU B . n B 1 10 PRO 10 10 10 PRO PRO B . n B 1 11 GLU 11 11 11 GLU GLU B . n B 1 12 GLY 12 12 12 GLY GLY B . n B 1 13 ILE 13 13 13 ILE ILE B . n B 1 14 ARG 14 14 14 ARG ARG B . n B 1 15 PRO 15 15 15 PRO PRO B . n B 1 16 GLY 16 16 16 GLY GLY B . n B 1 17 THR 17 17 17 THR THR B . n B 1 18 VAL 18 18 18 VAL VAL B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 ARG 20 20 20 ARG ARG B . n B 1 21 ILE 21 21 21 ILE ILE B . n B 1 22 ARG 22 22 22 ARG ARG B . n B 1 23 GLY 23 23 23 GLY GLY B . n B 1 24 LEU 24 24 24 LEU LEU B . n B 1 25 VAL 25 25 25 VAL VAL B . n B 1 26 PRO 26 26 26 PRO PRO B . n B 1 27 PRO 27 27 27 PRO PRO B . n B 1 28 ASN 28 28 28 ASN ASN B . n B 1 29 ALA 29 29 29 ALA ALA B . n B 1 30 SER 30 30 30 SER SER B . n B 1 31 ARG 31 31 31 ARG ARG B . n B 1 32 PHE 32 32 32 PHE PHE B . n B 1 33 HIS 33 33 33 HIS HIS B . n B 1 34 VAL 34 34 34 VAL VAL B . n B 1 35 ASN 35 35 35 ASN ASN B . n B 1 36 LEU 36 36 36 LEU LEU B . n B 1 37 LEU 37 37 37 LEU LEU B . n B 1 38 CYS 38 38 38 CYS CYS B . n B 1 39 GLY 39 39 39 GLY GLY B . n B 1 40 GLU 40 40 40 GLU GLU B . n B 1 41 GLU 41 41 41 GLU GLU B . n B 1 42 GLN 42 42 42 GLN GLN B . n B 1 43 GLY 43 43 43 GLY GLY B . n B 1 44 SER 44 44 44 SER SER B . n B 1 45 ASP 45 45 45 ASP ASP B . n B 1 46 ALA 46 46 46 ALA ALA B . n B 1 47 ALA 47 47 47 ALA ALA B . n B 1 48 LEU 48 48 48 LEU LEU B . n B 1 49 HIS 49 49 49 HIS HIS B . n B 1 50 PHE 50 50 50 PHE PHE B . n B 1 51 ASN 51 51 51 ASN ASN B . n B 1 52 PRO 52 52 52 PRO PRO B . n B 1 53 ARG 53 53 53 ARG ARG B . n B 1 54 LEU 54 54 54 LEU LEU B . n B 1 55 ASP 55 55 55 ASP ASP B . n B 1 56 THR 56 56 56 THR THR B . n B 1 57 SER 57 57 57 SER SER B . n B 1 58 GLU 58 58 58 GLU GLU B . n B 1 59 VAL 59 59 59 VAL VAL B . n B 1 60 VAL 60 60 60 VAL VAL B . n B 1 61 PHE 61 61 61 PHE PHE B . n B 1 62 ASN 62 62 62 ASN ASN B . n B 1 63 SER 63 63 63 SER SER B . n B 1 64 LYS 64 64 64 LYS LYS B . n B 1 65 GLU 65 65 65 GLU GLU B . n B 1 66 GLN 66 66 66 GLN GLN B . n B 1 67 GLY 67 67 67 GLY GLY B . n B 1 68 SER 68 68 68 SER SER B . n B 1 69 TRP 69 69 69 TRP TRP B . n B 1 70 GLY 70 70 70 GLY GLY B . n B 1 71 ARG 71 71 71 ARG ARG B . n B 1 72 GLU 72 72 72 GLU GLU B . n B 1 73 GLU 73 73 73 GLU GLU B . n B 1 74 ARG 74 74 74 ARG ARG B . n B 1 75 GLY 75 75 75 GLY GLY B . n B 1 76 PRO 76 76 76 PRO PRO B . n B 1 77 GLY 77 77 77 GLY GLY B . n B 1 78 VAL 78 78 78 VAL VAL B . n B 1 79 PRO 79 79 79 PRO PRO B . n B 1 80 PHE 80 80 80 PHE PHE B . n B 1 81 GLN 81 81 81 GLN GLN B . n B 1 82 ARG 82 82 82 ARG ARG B . n B 1 83 GLY 83 83 83 GLY GLY B . n B 1 84 GLN 84 84 84 GLN GLN B . n B 1 85 PRO 85 85 85 PRO PRO B . n B 1 86 PHE 86 86 86 PHE PHE B . n B 1 87 GLU 87 87 87 GLU GLU B . n B 1 88 VAL 88 88 88 VAL VAL B . n B 1 89 LEU 89 89 89 LEU LEU B . n B 1 90 ILE 90 90 90 ILE ILE B . n B 1 91 ILE 91 91 91 ILE ILE B . n B 1 92 ALA 92 92 92 ALA ALA B . n B 1 93 SER 93 93 93 SER SER B . n B 1 94 ASP 94 94 94 ASP ASP B . n B 1 95 ASP 95 95 95 ASP ASP B . n B 1 96 GLY 96 96 96 GLY GLY B . n B 1 97 PHE 97 97 97 PHE PHE B . n B 1 98 LYS 98 98 98 LYS LYS B . n B 1 99 ALA 99 99 99 ALA ALA B . n B 1 100 VAL 100 100 100 VAL VAL B . n B 1 101 VAL 101 101 101 VAL VAL B . n B 1 102 GLY 102 102 102 GLY GLY B . n B 1 103 ASP 103 103 103 ASP ASP B . n B 1 104 ALA 104 104 104 ALA ALA B . n B 1 105 GLN 105 105 105 GLN GLN B . n B 1 106 TYR 106 106 106 TYR TYR B . n B 1 107 HIS 107 107 107 HIS HIS B . n B 1 108 HIS 108 108 108 HIS HIS B . n B 1 109 PHE 109 109 109 PHE PHE B . n B 1 110 ARG 110 110 110 ARG ARG B . n B 1 111 HIS 111 111 111 HIS HIS B . n B 1 112 ARG 112 112 112 ARG ARG B . n B 1 113 LEU 113 113 113 LEU LEU B . n B 1 114 PRO 114 114 114 PRO PRO B . n B 1 115 LEU 115 115 115 LEU LEU B . n B 1 116 ALA 116 116 116 ALA ALA B . n B 1 117 ARG 117 117 117 ARG ARG B . n B 1 118 VAL 118 118 118 VAL VAL B . n B 1 119 ARG 119 119 119 ARG ARG B . n B 1 120 LEU 120 120 120 LEU LEU B . n B 1 121 VAL 121 121 121 VAL VAL B . n B 1 122 GLU 122 122 122 GLU GLU B . n B 1 123 VAL 123 123 123 VAL VAL B . n B 1 124 GLY 124 124 124 GLY GLY B . n B 1 125 GLY 125 125 125 GLY GLY B . n B 1 126 ASP 126 126 126 ASP ASP B . n B 1 127 VAL 127 127 127 VAL VAL B . n B 1 128 GLN 128 128 128 GLN GLN B . n B 1 129 LEU 129 129 129 LEU LEU B . n B 1 130 ASP 130 130 130 ASP ASP B . n B 1 131 SER 131 131 131 SER SER B . n B 1 132 VAL 132 132 132 VAL VAL B . n B 1 133 ARG 133 133 133 ARG ARG B . n B 1 134 ILE 134 134 134 ILE ILE B . n B 1 135 PHE 135 135 135 PHE PHE B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 1GN 1 998 998 1GN 1GN A . D 2 1GN 1 999 999 1GN 1GN B . E 3 HOH 1 999 11 HOH HOH A . E 3 HOH 2 1000 12 HOH HOH A . E 3 HOH 3 1001 13 HOH HOH A . E 3 HOH 4 1002 14 HOH HOH A . E 3 HOH 5 1003 15 HOH HOH A . E 3 HOH 6 1004 16 HOH HOH A . E 3 HOH 7 1005 17 HOH HOH A . E 3 HOH 8 1006 18 HOH HOH A . E 3 HOH 9 1007 19 HOH HOH A . E 3 HOH 10 1008 20 HOH HOH A . E 3 HOH 11 1009 21 HOH HOH A . E 3 HOH 12 1010 22 HOH HOH A . E 3 HOH 13 1011 23 HOH HOH A . E 3 HOH 14 1012 24 HOH HOH A . E 3 HOH 15 1013 25 HOH HOH A . E 3 HOH 16 1014 26 HOH HOH A . E 3 HOH 17 1015 27 HOH HOH A . E 3 HOH 18 1016 28 HOH HOH A . E 3 HOH 19 1017 29 HOH HOH A . E 3 HOH 20 1018 30 HOH HOH A . E 3 HOH 21 1019 31 HOH HOH A . E 3 HOH 22 1020 32 HOH HOH A . E 3 HOH 23 1021 33 HOH HOH A . E 3 HOH 24 1022 34 HOH HOH A . E 3 HOH 25 1023 35 HOH HOH A . E 3 HOH 26 1024 36 HOH HOH A . E 3 HOH 27 1025 37 HOH HOH A . E 3 HOH 28 1026 38 HOH HOH A . E 3 HOH 29 1027 39 HOH HOH A . E 3 HOH 30 1028 40 HOH HOH A . E 3 HOH 31 1029 41 HOH HOH A . E 3 HOH 32 1030 42 HOH HOH A . E 3 HOH 33 1031 43 HOH HOH A . E 3 HOH 34 1032 44 HOH HOH A . E 3 HOH 35 1033 45 HOH HOH A . E 3 HOH 36 1034 46 HOH HOH A . E 3 HOH 37 1035 47 HOH HOH A . E 3 HOH 38 1036 48 HOH HOH A . E 3 HOH 39 1037 49 HOH HOH A . E 3 HOH 40 1038 50 HOH HOH A . E 3 HOH 41 1039 51 HOH HOH A . E 3 HOH 42 1040 52 HOH HOH A . E 3 HOH 43 1041 53 HOH HOH A . E 3 HOH 44 1042 54 HOH HOH A . E 3 HOH 45 1043 55 HOH HOH A . E 3 HOH 46 1044 56 HOH HOH A . E 3 HOH 47 1045 57 HOH HOH A . E 3 HOH 48 1046 59 HOH HOH A . E 3 HOH 49 1047 62 HOH HOH A . E 3 HOH 50 1048 63 HOH HOH A . E 3 HOH 51 1049 64 HOH HOH A . E 3 HOH 52 1050 65 HOH HOH A . E 3 HOH 53 1051 66 HOH HOH A . E 3 HOH 54 1052 67 HOH HOH A . E 3 HOH 55 1053 68 HOH HOH A . E 3 HOH 56 1054 69 HOH HOH A . E 3 HOH 57 1055 70 HOH HOH A . E 3 HOH 58 1056 71 HOH HOH A . E 3 HOH 59 1057 72 HOH HOH A . E 3 HOH 60 1058 73 HOH HOH A . E 3 HOH 61 1059 74 HOH HOH A . E 3 HOH 62 1060 75 HOH HOH A . E 3 HOH 63 1061 76 HOH HOH A . E 3 HOH 64 1062 77 HOH HOH A . F 3 HOH 1 1000 1 HOH HOH B . F 3 HOH 2 1001 2 HOH HOH B . F 3 HOH 3 1002 3 HOH HOH B . F 3 HOH 4 1003 4 HOH HOH B . F 3 HOH 5 1004 5 HOH HOH B . F 3 HOH 6 1005 6 HOH HOH B . F 3 HOH 7 1006 7 HOH HOH B . F 3 HOH 8 1007 8 HOH HOH B . F 3 HOH 9 1008 9 HOH HOH B . F 3 HOH 10 1009 10 HOH HOH B . F 3 HOH 11 1010 58 HOH HOH B . F 3 HOH 12 1011 60 HOH HOH B . F 3 HOH 13 1012 61 HOH HOH B . F 3 HOH 14 1013 78 HOH HOH B . F 3 HOH 15 1014 79 HOH HOH B . F 3 HOH 16 1015 80 HOH HOH B . F 3 HOH 17 1016 81 HOH HOH B . F 3 HOH 18 1017 82 HOH HOH B . F 3 HOH 19 1018 83 HOH HOH B . F 3 HOH 20 1019 84 HOH HOH B . F 3 HOH 21 1020 85 HOH HOH B . F 3 HOH 22 1021 86 HOH HOH B . F 3 HOH 23 1022 87 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' 3.851 ? 1 X-PLOR refinement 3.851 ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 X-PLOR phasing 3.851 ? 5 # _cell.entry_id 3GAL _cell.length_a 95.590 _cell.length_b 54.620 _cell.length_c 61.200 _cell.angle_alpha 90.00 _cell.angle_beta 115.06 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3GAL _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # _exptl.entry_id 3GAL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.4 _exptl_crystal.density_percent_sol 48.3 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.1 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;CRYSTALS WERE GROWN USING THE HANGING DROP METHOD FROM DROPS CONTAINING 9 MG/ML PROTEIN AT PH 8.1 IN 50 MM SODIUM PHOSPHATE BUFFER, 0.3 M SODIUM CHLORIDE, 20 MM IMIDAZOLE, 8.5% PEG 3350 AND 25 MM GALACTOSAMINE. DROPS WERE EQUILIBRATED AGAINST RESERVOIRS CONTAINING 50 MM SODIUM PHOSPHATE BUFFER, 0.3 M SODIUM CHLORIDE, 20 MM IMIDAZOLE, 17% PEG 3350 AND 50 MM GALACTOSAMINE., vapor diffusion - hanging drop ; # _diffrn.id 1 _diffrn.ambient_temp 289 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1997-08 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.84 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE BW7B' _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline BW7B _diffrn_source.pdbx_wavelength 0.84 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 3GAL _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40.0 _reflns.d_resolution_high 1.9 _reflns.number_obs 22372 _reflns.number_all ? _reflns.percent_possible_obs 98.6 _reflns.pdbx_Rmerge_I_obs 0.0580000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 6.8 _reflns.B_iso_Wilson_estimate 15.3 _reflns.pdbx_redundancy 5.9 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.9 _reflns_shell.d_res_low 2.0 _reflns_shell.percent_possible_all 98.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.3630000 _reflns_shell.meanI_over_sigI_obs 5.5 _reflns_shell.pdbx_redundancy 4.8 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3GAL _refine.ls_number_reflns_obs 22335 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 10000000.00 _refine.pdbx_data_cutoff_low_absF 0.00100 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 1.90 _refine.ls_percent_reflns_obs 98.6 _refine.ls_R_factor_obs 0.2110000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2110000 _refine.ls_R_factor_R_free 0.2580000 _refine.ls_R_factor_R_free_error 0.008 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 1085 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 33.1 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'BULK SOLVENT MODEL USED' _refine.pdbx_starting_model 'FREE GALECTIN-7' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3GAL _refine_analyze.Luzzati_coordinate_error_obs 0.25 _refine_analyze.Luzzati_sigma_a_obs 0.25 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.27 _refine_analyze.Luzzati_sigma_a_free 0.19 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2110 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 24 _refine_hist.number_atoms_solvent 87 _refine_hist.number_atoms_total 2221 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.7 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 30.1 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 0.80 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it 1.94 1.50 ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it 3.25 2.00 ? ? 'X-RAY DIFFRACTION' ? x_scbond_it 3.16 2.00 ? ? 'X-RAY DIFFRACTION' ? x_scangle_it 4.99 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.90 _refine_ls_shell.d_res_low 2.02 _refine_ls_shell.number_reflns_R_work 3488 _refine_ls_shell.R_factor_R_work 0.2990000 _refine_ls_shell.percent_reflns_obs 98.1 _refine_ls_shell.R_factor_R_free 0.2810000 _refine_ls_shell.R_factor_R_free_error 0.021 _refine_ls_shell.percent_reflns_R_free 5.0 _refine_ls_shell.number_reflns_R_free 184 _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP TOPHCSDX.PR 'X-RAY DIFFRACTION' 2 ? ? 'X-RAY DIFFRACTION' 3 PARAM3.CHO TOPH3.CHO 'X-RAY DIFFRACTION' # _struct_ncs_oper.id 1 _struct_ncs_oper.code given _struct_ncs_oper.details ? _struct_ncs_oper.matrix[1][1] -0.997677 _struct_ncs_oper.matrix[1][2] -0.066346 _struct_ncs_oper.matrix[1][3] -0.015440 _struct_ncs_oper.matrix[2][1] -0.009592 _struct_ncs_oper.matrix[2][2] 0.361230 _struct_ncs_oper.matrix[2][3] -0.932427 _struct_ncs_oper.matrix[3][1] 0.067440 _struct_ncs_oper.matrix[3][2] -0.930113 _struct_ncs_oper.matrix[3][3] -0.361028 _struct_ncs_oper.vector[1] -12.19768 _struct_ncs_oper.vector[2] 6.97048 _struct_ncs_oper.vector[3] 11.58594 # _database_PDB_matrix.entry_id 3GAL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3GAL _struct.title 'CRYSTAL STRUCTURE OF HUMAN GALECTIN-7 IN COMPLEX WITH GALACTOSAMINE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3GAL _struct_keywords.pdbx_keywords LECTIN _struct_keywords.text 'GALAPTIN, LECTIN, GALECTIN, CARBOHYDRATE BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LEG7_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P47929 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;SNVPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERGPGVPF QRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVRLVEVGGDVQLDSVRIF ; _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3GAL A 1 ? 135 ? P47929 1 ? 135 ? 1 135 2 1 3GAL B 1 ? 135 ? P47929 1 ? 135 ? 1 135 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E 2 1 B,D,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_biol.id 1 2 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 115 ? ARG A 117 ? LEU A 115 ARG A 117 5 ? 3 HELX_P HELX_P2 2 LEU B 115 ? ARG B 117 ? LEU B 115 ARG B 117 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? C ? 6 ? D ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 5 ? SER A 8 ? HIS A 5 SER A 8 A 2 LEU A 120 ? GLY A 125 ? LEU A 120 GLY A 125 A 3 PHE A 32 ? LEU A 37 ? PHE A 32 LEU A 37 A 4 ALA A 46 ? ARG A 53 ? ALA A 46 ARG A 53 A 5 GLU A 58 ? ASN A 62 ? GLU A 58 ASN A 62 B 1 ALA A 104 ? ARG A 110 ? ALA A 104 ARG A 110 B 2 GLY A 96 ? VAL A 101 ? GLY A 96 VAL A 101 B 3 PRO A 85 ? ALA A 92 ? PRO A 85 ALA A 92 B 4 THR A 17 ? LEU A 24 ? THR A 17 LEU A 24 B 5 GLN A 128 ? PHE A 135 ? GLN A 128 PHE A 135 C 1 HIS B 5 ? SER B 8 ? HIS B 5 SER B 8 C 2 LEU B 120 ? GLY B 125 ? LEU B 120 GLY B 125 C 3 ARG B 31 ? LEU B 37 ? ARG B 31 LEU B 37 C 4 ALA B 46 ? ARG B 53 ? ALA B 46 ARG B 53 C 5 GLU B 58 ? ASN B 62 ? GLU B 58 ASN B 62 C 6 GLU B 73 ? GLY B 75 ? GLU B 73 GLY B 75 D 1 ALA B 104 ? ARG B 110 ? ALA B 104 ARG B 110 D 2 GLY B 96 ? VAL B 101 ? GLY B 96 VAL B 101 D 3 PRO B 85 ? ALA B 92 ? PRO B 85 ALA B 92 D 4 VAL B 18 ? LEU B 24 ? VAL B 18 LEU B 24 D 5 GLN B 128 ? PHE B 135 ? GLN B 128 PHE B 135 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O HIS A 5 ? O HIS A 5 N VAL A 123 ? N VAL A 123 A 2 3 O LEU A 120 ? O LEU A 120 N LEU A 37 ? N LEU A 37 A 3 4 O VAL A 34 ? O VAL A 34 N PHE A 50 ? N PHE A 50 A 4 5 O HIS A 49 ? O HIS A 49 N ASN A 62 ? N ASN A 62 B 1 2 O ALA A 104 ? O ALA A 104 N VAL A 101 ? N VAL A 101 B 2 3 O LYS A 98 ? O LYS A 98 N ILE A 91 ? N ILE A 91 B 3 4 O PHE A 86 ? O PHE A 86 N GLY A 23 ? N GLY A 23 B 4 5 O VAL A 18 ? O VAL A 18 N PHE A 135 ? N PHE A 135 C 1 2 O HIS B 5 ? O HIS B 5 N VAL B 123 ? N VAL B 123 C 2 3 O LEU B 120 ? O LEU B 120 N LEU B 37 ? N LEU B 37 C 3 4 O PHE B 32 ? O PHE B 32 N PRO B 52 ? N PRO B 52 C 4 5 O HIS B 49 ? O HIS B 49 N ASN B 62 ? N ASN B 62 C 5 6 O VAL B 59 ? O VAL B 59 N GLY B 75 ? N GLY B 75 D 1 2 O ALA B 104 ? O ALA B 104 N VAL B 101 ? N VAL B 101 D 2 3 O LYS B 98 ? O LYS B 98 N ILE B 91 ? N ILE B 91 D 3 4 O PHE B 86 ? O PHE B 86 N GLY B 23 ? N GLY B 23 D 4 5 O VAL B 18 ? O VAL B 18 N PHE B 135 ? N PHE B 135 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B ALA 29 ? ? NH2 B ARG 82 ? ? 2.10 2 1 OE2 B GLU 58 ? ? NH1 B ARG 74 ? ? 2.13 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 4 ? ? -53.22 87.59 2 1 PRO A 79 ? ? -84.02 36.18 3 1 SER A 131 ? ? -171.83 145.29 4 1 ASN B 2 ? ? -155.75 -42.38 5 1 VAL B 3 ? ? 121.41 162.25 6 1 PRO B 26 ? ? -58.63 176.55 7 1 ASN B 28 ? ? 89.62 -33.78 8 1 ARG B 31 ? ? 178.50 151.55 9 1 GLU B 41 ? ? -96.42 -154.01 10 1 SER B 57 ? ? 43.20 78.27 11 1 PRO B 76 ? ? -60.79 96.15 12 1 PRO B 79 ? ? -52.31 7.88 13 1 ASP B 103 ? ? 92.03 -39.19 14 1 TYR B 106 ? ? -131.77 -33.23 15 1 HIS B 107 ? ? -171.36 148.18 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 1026 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id E _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id SER _pdbx_unobs_or_zero_occ_residues.auth_seq_id 1 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id SER _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 1GN C2 C N R 1 1GN C3 C N R 2 1GN C4 C N R 3 1GN O5 O N N 4 1GN C1 C N R 5 1GN O1 O N N 6 1GN N2 N N N 7 1GN O3 O N N 8 1GN O4 O N N 9 1GN C5 C N R 10 1GN C6 C N N 11 1GN O6 O N N 12 1GN H2 H N N 13 1GN H3 H N N 14 1GN H4 H N N 15 1GN H1 H N N 16 1GN HO1 H N N 17 1GN HN21 H N N 18 1GN HN22 H N N 19 1GN HO3 H N N 20 1GN HO4 H N N 21 1GN H5 H N N 22 1GN H61 H N N 23 1GN H62 H N N 24 1GN HO6 H N N 25 ALA N N N N 26 ALA CA C N S 27 ALA C C N N 28 ALA O O N N 29 ALA CB C N N 30 ALA OXT O N N 31 ALA H H N N 32 ALA H2 H N N 33 ALA HA H N N 34 ALA HB1 H N N 35 ALA HB2 H N N 36 ALA HB3 H N N 37 ALA HXT H N N 38 ARG N N N N 39 ARG CA C N S 40 ARG C C N N 41 ARG O O N N 42 ARG CB C N N 43 ARG CG C N N 44 ARG CD C N N 45 ARG NE N N N 46 ARG CZ C N N 47 ARG NH1 N N N 48 ARG NH2 N N N 49 ARG OXT O N N 50 ARG H H N N 51 ARG H2 H N N 52 ARG HA H N N 53 ARG HB2 H N N 54 ARG HB3 H N N 55 ARG HG2 H N N 56 ARG HG3 H N N 57 ARG HD2 H N N 58 ARG HD3 H N N 59 ARG HE H N N 60 ARG HH11 H N N 61 ARG HH12 H N N 62 ARG HH21 H N N 63 ARG HH22 H N N 64 ARG HXT H N N 65 ASN N N N N 66 ASN CA C N S 67 ASN C C N N 68 ASN O O N N 69 ASN CB C N N 70 ASN CG C N N 71 ASN OD1 O N N 72 ASN ND2 N N N 73 ASN OXT O N N 74 ASN H H N N 75 ASN H2 H N N 76 ASN HA H N N 77 ASN HB2 H N N 78 ASN HB3 H N N 79 ASN HD21 H N N 80 ASN HD22 H N N 81 ASN HXT H N N 82 ASP N N N N 83 ASP CA C N S 84 ASP C C N N 85 ASP O O N N 86 ASP CB C N N 87 ASP CG C N N 88 ASP OD1 O N N 89 ASP OD2 O N N 90 ASP OXT O N N 91 ASP H H N N 92 ASP H2 H N N 93 ASP HA H N N 94 ASP HB2 H N N 95 ASP HB3 H N N 96 ASP HD2 H N N 97 ASP HXT H N N 98 CYS N N N N 99 CYS CA C N R 100 CYS C C N N 101 CYS O O N N 102 CYS CB C N N 103 CYS SG S N N 104 CYS OXT O N N 105 CYS H H N N 106 CYS H2 H N N 107 CYS HA H N N 108 CYS HB2 H N N 109 CYS HB3 H N N 110 CYS HG H N N 111 CYS HXT H N N 112 GLN N N N N 113 GLN CA C N S 114 GLN C C N N 115 GLN O O N N 116 GLN CB C N N 117 GLN CG C N N 118 GLN CD C N N 119 GLN OE1 O N N 120 GLN NE2 N N N 121 GLN OXT O N N 122 GLN H H N N 123 GLN H2 H N N 124 GLN HA H N N 125 GLN HB2 H N N 126 GLN HB3 H N N 127 GLN HG2 H N N 128 GLN HG3 H N N 129 GLN HE21 H N N 130 GLN HE22 H N N 131 GLN HXT H N N 132 GLU N N N N 133 GLU CA C N S 134 GLU C C N N 135 GLU O O N N 136 GLU CB C N N 137 GLU CG C N N 138 GLU CD C N N 139 GLU OE1 O N N 140 GLU OE2 O N N 141 GLU OXT O N N 142 GLU H H N N 143 GLU H2 H N N 144 GLU HA H N N 145 GLU HB2 H N N 146 GLU HB3 H N N 147 GLU HG2 H N N 148 GLU HG3 H N N 149 GLU HE2 H N N 150 GLU HXT H N N 151 GLY N N N N 152 GLY CA C N N 153 GLY C C N N 154 GLY O O N N 155 GLY OXT O N N 156 GLY H H N N 157 GLY H2 H N N 158 GLY HA2 H N N 159 GLY HA3 H N N 160 GLY HXT H N N 161 HIS N N N N 162 HIS CA C N S 163 HIS C C N N 164 HIS O O N N 165 HIS CB C N N 166 HIS CG C Y N 167 HIS ND1 N Y N 168 HIS CD2 C Y N 169 HIS CE1 C Y N 170 HIS NE2 N Y N 171 HIS OXT O N N 172 HIS H H N N 173 HIS H2 H N N 174 HIS HA H N N 175 HIS HB2 H N N 176 HIS HB3 H N N 177 HIS HD1 H N N 178 HIS HD2 H N N 179 HIS HE1 H N N 180 HIS HE2 H N N 181 HIS HXT H N N 182 HOH O O N N 183 HOH H1 H N N 184 HOH H2 H N N 185 ILE N N N N 186 ILE CA C N S 187 ILE C C N N 188 ILE O O N N 189 ILE CB C N S 190 ILE CG1 C N N 191 ILE CG2 C N N 192 ILE CD1 C N N 193 ILE OXT O N N 194 ILE H H N N 195 ILE H2 H N N 196 ILE HA H N N 197 ILE HB H N N 198 ILE HG12 H N N 199 ILE HG13 H N N 200 ILE HG21 H N N 201 ILE HG22 H N N 202 ILE HG23 H N N 203 ILE HD11 H N N 204 ILE HD12 H N N 205 ILE HD13 H N N 206 ILE HXT H N N 207 LEU N N N N 208 LEU CA C N S 209 LEU C C N N 210 LEU O O N N 211 LEU CB C N N 212 LEU CG C N N 213 LEU CD1 C N N 214 LEU CD2 C N N 215 LEU OXT O N N 216 LEU H H N N 217 LEU H2 H N N 218 LEU HA H N N 219 LEU HB2 H N N 220 LEU HB3 H N N 221 LEU HG H N N 222 LEU HD11 H N N 223 LEU HD12 H N N 224 LEU HD13 H N N 225 LEU HD21 H N N 226 LEU HD22 H N N 227 LEU HD23 H N N 228 LEU HXT H N N 229 LYS N N N N 230 LYS CA C N S 231 LYS C C N N 232 LYS O O N N 233 LYS CB C N N 234 LYS CG C N N 235 LYS CD C N N 236 LYS CE C N N 237 LYS NZ N N N 238 LYS OXT O N N 239 LYS H H N N 240 LYS H2 H N N 241 LYS HA H N N 242 LYS HB2 H N N 243 LYS HB3 H N N 244 LYS HG2 H N N 245 LYS HG3 H N N 246 LYS HD2 H N N 247 LYS HD3 H N N 248 LYS HE2 H N N 249 LYS HE3 H N N 250 LYS HZ1 H N N 251 LYS HZ2 H N N 252 LYS HZ3 H N N 253 LYS HXT H N N 254 PHE N N N N 255 PHE CA C N S 256 PHE C C N N 257 PHE O O N N 258 PHE CB C N N 259 PHE CG C Y N 260 PHE CD1 C Y N 261 PHE CD2 C Y N 262 PHE CE1 C Y N 263 PHE CE2 C Y N 264 PHE CZ C Y N 265 PHE OXT O N N 266 PHE H H N N 267 PHE H2 H N N 268 PHE HA H N N 269 PHE HB2 H N N 270 PHE HB3 H N N 271 PHE HD1 H N N 272 PHE HD2 H N N 273 PHE HE1 H N N 274 PHE HE2 H N N 275 PHE HZ H N N 276 PHE HXT H N N 277 PRO N N N N 278 PRO CA C N S 279 PRO C C N N 280 PRO O O N N 281 PRO CB C N N 282 PRO CG C N N 283 PRO CD C N N 284 PRO OXT O N N 285 PRO H H N N 286 PRO HA H N N 287 PRO HB2 H N N 288 PRO HB3 H N N 289 PRO HG2 H N N 290 PRO HG3 H N N 291 PRO HD2 H N N 292 PRO HD3 H N N 293 PRO HXT H N N 294 SER N N N N 295 SER CA C N S 296 SER C C N N 297 SER O O N N 298 SER CB C N N 299 SER OG O N N 300 SER OXT O N N 301 SER H H N N 302 SER H2 H N N 303 SER HA H N N 304 SER HB2 H N N 305 SER HB3 H N N 306 SER HG H N N 307 SER HXT H N N 308 THR N N N N 309 THR CA C N S 310 THR C C N N 311 THR O O N N 312 THR CB C N R 313 THR OG1 O N N 314 THR CG2 C N N 315 THR OXT O N N 316 THR H H N N 317 THR H2 H N N 318 THR HA H N N 319 THR HB H N N 320 THR HG1 H N N 321 THR HG21 H N N 322 THR HG22 H N N 323 THR HG23 H N N 324 THR HXT H N N 325 TRP N N N N 326 TRP CA C N S 327 TRP C C N N 328 TRP O O N N 329 TRP CB C N N 330 TRP CG C Y N 331 TRP CD1 C Y N 332 TRP CD2 C Y N 333 TRP NE1 N Y N 334 TRP CE2 C Y N 335 TRP CE3 C Y N 336 TRP CZ2 C Y N 337 TRP CZ3 C Y N 338 TRP CH2 C Y N 339 TRP OXT O N N 340 TRP H H N N 341 TRP H2 H N N 342 TRP HA H N N 343 TRP HB2 H N N 344 TRP HB3 H N N 345 TRP HD1 H N N 346 TRP HE1 H N N 347 TRP HE3 H N N 348 TRP HZ2 H N N 349 TRP HZ3 H N N 350 TRP HH2 H N N 351 TRP HXT H N N 352 TYR N N N N 353 TYR CA C N S 354 TYR C C N N 355 TYR O O N N 356 TYR CB C N N 357 TYR CG C Y N 358 TYR CD1 C Y N 359 TYR CD2 C Y N 360 TYR CE1 C Y N 361 TYR CE2 C Y N 362 TYR CZ C Y N 363 TYR OH O N N 364 TYR OXT O N N 365 TYR H H N N 366 TYR H2 H N N 367 TYR HA H N N 368 TYR HB2 H N N 369 TYR HB3 H N N 370 TYR HD1 H N N 371 TYR HD2 H N N 372 TYR HE1 H N N 373 TYR HE2 H N N 374 TYR HH H N N 375 TYR HXT H N N 376 VAL N N N N 377 VAL CA C N S 378 VAL C C N N 379 VAL O O N N 380 VAL CB C N N 381 VAL CG1 C N N 382 VAL CG2 C N N 383 VAL OXT O N N 384 VAL H H N N 385 VAL H2 H N N 386 VAL HA H N N 387 VAL HB H N N 388 VAL HG11 H N N 389 VAL HG12 H N N 390 VAL HG13 H N N 391 VAL HG21 H N N 392 VAL HG22 H N N 393 VAL HG23 H N N 394 VAL HXT H N N 395 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1GN C2 C3 sing N N 1 1GN C2 C1 sing N N 2 1GN C2 N2 sing N N 3 1GN C2 H2 sing N N 4 1GN C3 C4 sing N N 5 1GN C3 O3 sing N N 6 1GN C3 H3 sing N N 7 1GN C4 O4 sing N N 8 1GN C4 C5 sing N N 9 1GN C4 H4 sing N N 10 1GN O5 C1 sing N N 11 1GN O5 C5 sing N N 12 1GN C1 O1 sing N N 13 1GN C1 H1 sing N N 14 1GN O1 HO1 sing N N 15 1GN N2 HN21 sing N N 16 1GN N2 HN22 sing N N 17 1GN O3 HO3 sing N N 18 1GN O4 HO4 sing N N 19 1GN C5 C6 sing N N 20 1GN C5 H5 sing N N 21 1GN C6 O6 sing N N 22 1GN C6 H61 sing N N 23 1GN C6 H62 sing N N 24 1GN O6 HO6 sing N N 25 ALA N CA sing N N 26 ALA N H sing N N 27 ALA N H2 sing N N 28 ALA CA C sing N N 29 ALA CA CB sing N N 30 ALA CA HA sing N N 31 ALA C O doub N N 32 ALA C OXT sing N N 33 ALA CB HB1 sing N N 34 ALA CB HB2 sing N N 35 ALA CB HB3 sing N N 36 ALA OXT HXT sing N N 37 ARG N CA sing N N 38 ARG N H sing N N 39 ARG N H2 sing N N 40 ARG CA C sing N N 41 ARG CA CB sing N N 42 ARG CA HA sing N N 43 ARG C O doub N N 44 ARG C OXT sing N N 45 ARG CB CG sing N N 46 ARG CB HB2 sing N N 47 ARG CB HB3 sing N N 48 ARG CG CD sing N N 49 ARG CG HG2 sing N N 50 ARG CG HG3 sing N N 51 ARG CD NE sing N N 52 ARG CD HD2 sing N N 53 ARG CD HD3 sing N N 54 ARG NE CZ sing N N 55 ARG NE HE sing N N 56 ARG CZ NH1 sing N N 57 ARG CZ NH2 doub N N 58 ARG NH1 HH11 sing N N 59 ARG NH1 HH12 sing N N 60 ARG NH2 HH21 sing N N 61 ARG NH2 HH22 sing N N 62 ARG OXT HXT sing N N 63 ASN N CA sing N N 64 ASN N H sing N N 65 ASN N H2 sing N N 66 ASN CA C sing N N 67 ASN CA CB sing N N 68 ASN CA HA sing N N 69 ASN C O doub N N 70 ASN C OXT sing N N 71 ASN CB CG sing N N 72 ASN CB HB2 sing N N 73 ASN CB HB3 sing N N 74 ASN CG OD1 doub N N 75 ASN CG ND2 sing N N 76 ASN ND2 HD21 sing N N 77 ASN ND2 HD22 sing N N 78 ASN OXT HXT sing N N 79 ASP N CA sing N N 80 ASP N H sing N N 81 ASP N H2 sing N N 82 ASP CA C sing N N 83 ASP CA CB sing N N 84 ASP CA HA sing N N 85 ASP C O doub N N 86 ASP C OXT sing N N 87 ASP CB CG sing N N 88 ASP CB HB2 sing N N 89 ASP CB HB3 sing N N 90 ASP CG OD1 doub N N 91 ASP CG OD2 sing N N 92 ASP OD2 HD2 sing N N 93 ASP OXT HXT sing N N 94 CYS N CA sing N N 95 CYS N H sing N N 96 CYS N H2 sing N N 97 CYS CA C sing N N 98 CYS CA CB sing N N 99 CYS CA HA sing N N 100 CYS C O doub N N 101 CYS C OXT sing N N 102 CYS CB SG sing N N 103 CYS CB HB2 sing N N 104 CYS CB HB3 sing N N 105 CYS SG HG sing N N 106 CYS OXT HXT sing N N 107 GLN N CA sing N N 108 GLN N H sing N N 109 GLN N H2 sing N N 110 GLN CA C sing N N 111 GLN CA CB sing N N 112 GLN CA HA sing N N 113 GLN C O doub N N 114 GLN C OXT sing N N 115 GLN CB CG sing N N 116 GLN CB HB2 sing N N 117 GLN CB HB3 sing N N 118 GLN CG CD sing N N 119 GLN CG HG2 sing N N 120 GLN CG HG3 sing N N 121 GLN CD OE1 doub N N 122 GLN CD NE2 sing N N 123 GLN NE2 HE21 sing N N 124 GLN NE2 HE22 sing N N 125 GLN OXT HXT sing N N 126 GLU N CA sing N N 127 GLU N H sing N N 128 GLU N H2 sing N N 129 GLU CA C sing N N 130 GLU CA CB sing N N 131 GLU CA HA sing N N 132 GLU C O doub N N 133 GLU C OXT sing N N 134 GLU CB CG sing N N 135 GLU CB HB2 sing N N 136 GLU CB HB3 sing N N 137 GLU CG CD sing N N 138 GLU CG HG2 sing N N 139 GLU CG HG3 sing N N 140 GLU CD OE1 doub N N 141 GLU CD OE2 sing N N 142 GLU OE2 HE2 sing N N 143 GLU OXT HXT sing N N 144 GLY N CA sing N N 145 GLY N H sing N N 146 GLY N H2 sing N N 147 GLY CA C sing N N 148 GLY CA HA2 sing N N 149 GLY CA HA3 sing N N 150 GLY C O doub N N 151 GLY C OXT sing N N 152 GLY OXT HXT sing N N 153 HIS N CA sing N N 154 HIS N H sing N N 155 HIS N H2 sing N N 156 HIS CA C sing N N 157 HIS CA CB sing N N 158 HIS CA HA sing N N 159 HIS C O doub N N 160 HIS C OXT sing N N 161 HIS CB CG sing N N 162 HIS CB HB2 sing N N 163 HIS CB HB3 sing N N 164 HIS CG ND1 sing Y N 165 HIS CG CD2 doub Y N 166 HIS ND1 CE1 doub Y N 167 HIS ND1 HD1 sing N N 168 HIS CD2 NE2 sing Y N 169 HIS CD2 HD2 sing N N 170 HIS CE1 NE2 sing Y N 171 HIS CE1 HE1 sing N N 172 HIS NE2 HE2 sing N N 173 HIS OXT HXT sing N N 174 HOH O H1 sing N N 175 HOH O H2 sing N N 176 ILE N CA sing N N 177 ILE N H sing N N 178 ILE N H2 sing N N 179 ILE CA C sing N N 180 ILE CA CB sing N N 181 ILE CA HA sing N N 182 ILE C O doub N N 183 ILE C OXT sing N N 184 ILE CB CG1 sing N N 185 ILE CB CG2 sing N N 186 ILE CB HB sing N N 187 ILE CG1 CD1 sing N N 188 ILE CG1 HG12 sing N N 189 ILE CG1 HG13 sing N N 190 ILE CG2 HG21 sing N N 191 ILE CG2 HG22 sing N N 192 ILE CG2 HG23 sing N N 193 ILE CD1 HD11 sing N N 194 ILE CD1 HD12 sing N N 195 ILE CD1 HD13 sing N N 196 ILE OXT HXT sing N N 197 LEU N CA sing N N 198 LEU N H sing N N 199 LEU N H2 sing N N 200 LEU CA C sing N N 201 LEU CA CB sing N N 202 LEU CA HA sing N N 203 LEU C O doub N N 204 LEU C OXT sing N N 205 LEU CB CG sing N N 206 LEU CB HB2 sing N N 207 LEU CB HB3 sing N N 208 LEU CG CD1 sing N N 209 LEU CG CD2 sing N N 210 LEU CG HG sing N N 211 LEU CD1 HD11 sing N N 212 LEU CD1 HD12 sing N N 213 LEU CD1 HD13 sing N N 214 LEU CD2 HD21 sing N N 215 LEU CD2 HD22 sing N N 216 LEU CD2 HD23 sing N N 217 LEU OXT HXT sing N N 218 LYS N CA sing N N 219 LYS N H sing N N 220 LYS N H2 sing N N 221 LYS CA C sing N N 222 LYS CA CB sing N N 223 LYS CA HA sing N N 224 LYS C O doub N N 225 LYS C OXT sing N N 226 LYS CB CG sing N N 227 LYS CB HB2 sing N N 228 LYS CB HB3 sing N N 229 LYS CG CD sing N N 230 LYS CG HG2 sing N N 231 LYS CG HG3 sing N N 232 LYS CD CE sing N N 233 LYS CD HD2 sing N N 234 LYS CD HD3 sing N N 235 LYS CE NZ sing N N 236 LYS CE HE2 sing N N 237 LYS CE HE3 sing N N 238 LYS NZ HZ1 sing N N 239 LYS NZ HZ2 sing N N 240 LYS NZ HZ3 sing N N 241 LYS OXT HXT sing N N 242 PHE N CA sing N N 243 PHE N H sing N N 244 PHE N H2 sing N N 245 PHE CA C sing N N 246 PHE CA CB sing N N 247 PHE CA HA sing N N 248 PHE C O doub N N 249 PHE C OXT sing N N 250 PHE CB CG sing N N 251 PHE CB HB2 sing N N 252 PHE CB HB3 sing N N 253 PHE CG CD1 doub Y N 254 PHE CG CD2 sing Y N 255 PHE CD1 CE1 sing Y N 256 PHE CD1 HD1 sing N N 257 PHE CD2 CE2 doub Y N 258 PHE CD2 HD2 sing N N 259 PHE CE1 CZ doub Y N 260 PHE CE1 HE1 sing N N 261 PHE CE2 CZ sing Y N 262 PHE CE2 HE2 sing N N 263 PHE CZ HZ sing N N 264 PHE OXT HXT sing N N 265 PRO N CA sing N N 266 PRO N CD sing N N 267 PRO N H sing N N 268 PRO CA C sing N N 269 PRO CA CB sing N N 270 PRO CA HA sing N N 271 PRO C O doub N N 272 PRO C OXT sing N N 273 PRO CB CG sing N N 274 PRO CB HB2 sing N N 275 PRO CB HB3 sing N N 276 PRO CG CD sing N N 277 PRO CG HG2 sing N N 278 PRO CG HG3 sing N N 279 PRO CD HD2 sing N N 280 PRO CD HD3 sing N N 281 PRO OXT HXT sing N N 282 SER N CA sing N N 283 SER N H sing N N 284 SER N H2 sing N N 285 SER CA C sing N N 286 SER CA CB sing N N 287 SER CA HA sing N N 288 SER C O doub N N 289 SER C OXT sing N N 290 SER CB OG sing N N 291 SER CB HB2 sing N N 292 SER CB HB3 sing N N 293 SER OG HG sing N N 294 SER OXT HXT sing N N 295 THR N CA sing N N 296 THR N H sing N N 297 THR N H2 sing N N 298 THR CA C sing N N 299 THR CA CB sing N N 300 THR CA HA sing N N 301 THR C O doub N N 302 THR C OXT sing N N 303 THR CB OG1 sing N N 304 THR CB CG2 sing N N 305 THR CB HB sing N N 306 THR OG1 HG1 sing N N 307 THR CG2 HG21 sing N N 308 THR CG2 HG22 sing N N 309 THR CG2 HG23 sing N N 310 THR OXT HXT sing N N 311 TRP N CA sing N N 312 TRP N H sing N N 313 TRP N H2 sing N N 314 TRP CA C sing N N 315 TRP CA CB sing N N 316 TRP CA HA sing N N 317 TRP C O doub N N 318 TRP C OXT sing N N 319 TRP CB CG sing N N 320 TRP CB HB2 sing N N 321 TRP CB HB3 sing N N 322 TRP CG CD1 doub Y N 323 TRP CG CD2 sing Y N 324 TRP CD1 NE1 sing Y N 325 TRP CD1 HD1 sing N N 326 TRP CD2 CE2 doub Y N 327 TRP CD2 CE3 sing Y N 328 TRP NE1 CE2 sing Y N 329 TRP NE1 HE1 sing N N 330 TRP CE2 CZ2 sing Y N 331 TRP CE3 CZ3 doub Y N 332 TRP CE3 HE3 sing N N 333 TRP CZ2 CH2 doub Y N 334 TRP CZ2 HZ2 sing N N 335 TRP CZ3 CH2 sing Y N 336 TRP CZ3 HZ3 sing N N 337 TRP CH2 HH2 sing N N 338 TRP OXT HXT sing N N 339 TYR N CA sing N N 340 TYR N H sing N N 341 TYR N H2 sing N N 342 TYR CA C sing N N 343 TYR CA CB sing N N 344 TYR CA HA sing N N 345 TYR C O doub N N 346 TYR C OXT sing N N 347 TYR CB CG sing N N 348 TYR CB HB2 sing N N 349 TYR CB HB3 sing N N 350 TYR CG CD1 doub Y N 351 TYR CG CD2 sing Y N 352 TYR CD1 CE1 sing Y N 353 TYR CD1 HD1 sing N N 354 TYR CD2 CE2 doub Y N 355 TYR CD2 HD2 sing N N 356 TYR CE1 CZ doub Y N 357 TYR CE1 HE1 sing N N 358 TYR CE2 CZ sing Y N 359 TYR CE2 HE2 sing N N 360 TYR CZ OH sing N N 361 TYR OH HH sing N N 362 TYR OXT HXT sing N N 363 VAL N CA sing N N 364 VAL N H sing N N 365 VAL N H2 sing N N 366 VAL CA C sing N N 367 VAL CA CB sing N N 368 VAL CA HA sing N N 369 VAL C O doub N N 370 VAL C OXT sing N N 371 VAL CB CG1 sing N N 372 VAL CB CG2 sing N N 373 VAL CB HB sing N N 374 VAL CG1 HG11 sing N N 375 VAL CG1 HG12 sing N N 376 VAL CG1 HG13 sing N N 377 VAL CG2 HG21 sing N N 378 VAL CG2 HG22 sing N N 379 VAL CG2 HG23 sing N N 380 VAL OXT HXT sing N N 381 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'native Gal-7 at 1.9 A resolution as a search model.' # _atom_sites.entry_id 3GAL _atom_sites.fract_transf_matrix[1][1] 0.010461 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004892 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018308 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018038 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_