HEADER TRANSFERASE 18-FEB-09 3GB2
TITLE GSK3BETA INHIBITOR COMPLEX
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: GLYCOGEN SYNTHASE KINASE-3 BETA;
COMPND 3 CHAIN: A;
COMPND 4 SYNONYM: GSK-3 BETA;
COMPND 5 EC: 2.7.11.26;
COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: GSK3B, GSK3BETA;
SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HI5;
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PFASTBAC
KEYWDS PROTEIN KINASE, INHIBITOR, COMPLEX, ATP-BINDING, KINASE, NUCLEOTIDE-
KEYWDS 2 BINDING, PHOSPHOPROTEIN, SERINE/THREONINE-PROTEIN KINASE,
KEYWDS 3 TRANSFERASE, WNT SIGNALING PATHWAY, CDM
EXPDTA X-RAY DIFFRACTION
AUTHOR C.D.MOL
REVDAT 5 06-NOV-24 3GB2 1 REMARK
REVDAT 4 22-NOV-23 3GB2 1 REMARK
REVDAT 3 06-SEP-23 3GB2 1 REMARK LINK
REVDAT 2 13-JUL-11 3GB2 1 VERSN
REVDAT 1 02-MAR-10 3GB2 0
JRNL AUTH M.SAITOH,J.KUNITOMO,E.KIMURA,H.IWASHITA,Y.UNO,T.ONISHI,
JRNL AUTH 2 N.UCHIYAMA,T.KAWAMOTO,T.TANAKA,C.D.MOL,D.R.DOUGAN,
JRNL AUTH 3 G.P.TEXTOR,G.P.SNELL,M.TAKIZAWA,F.ITOH,M.KORI
JRNL TITL 2-{3-[4-(ALKYLSULFINYL)
JRNL TITL 2 PHENYL]-1-BENZOFURAN-5-YL}-5-METHYL-1,3,4-OXADIAZOLE
JRNL TITL 3 DERIVATIVES AS NOVEL INHIBITORS OF GLYCOGEN SYNTHASE
JRNL TITL 4 KINASE-3BETA WITH GOOD BRAIN PERMEABILITY.
JRNL REF J.MED.CHEM. V. 52 6270 2009
JRNL REFN ISSN 0022-2623
JRNL PMID 19775160
JRNL DOI 10.1021/JM900647E
REMARK 2
REMARK 2 RESOLUTION. 2.40 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.2.0005
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00
REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL
REMARK 3 COMPLETENESS FOR RANGE (%) : 89.9
REMARK 3 NUMBER OF REFLECTIONS : 16542
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.225
REMARK 3 R VALUE (WORKING SET) : 0.222
REMARK 3 FREE R VALUE : 0.289
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200
REMARK 3 FREE R VALUE TEST SET COUNT : 911
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46
REMARK 3 REFLECTION IN BIN (WORKING SET) : 815
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 63.38
REMARK 3 BIN R VALUE (WORKING SET) : 0.2840
REMARK 3 BIN FREE R VALUE SET COUNT : 52
REMARK 3 BIN FREE R VALUE : 0.2970
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 2734
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 24
REMARK 3 SOLVENT ATOMS : 66
REMARK 3
REMARK 3 B VALUES.
REMARK 3 B VALUE TYPE : LIKELY RESIDUAL
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.85
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -4.87000
REMARK 3 B22 (A**2) : -4.81000
REMARK 3 B33 (A**2) : 9.67000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): 0.414
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.303
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.271
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 25.445
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.908
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2835 ; 0.012 ; 0.022
REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3859 ; 1.396 ; 1.992
REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 338 ; 6.164 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 125 ;34.603 ;22.960
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 473 ;18.193 ;15.000
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;18.133 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 431 ; 0.086 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2151 ; 0.007 ; 0.022
REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1373 ; 0.220 ; 0.200
REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1930 ; 0.314 ; 0.200
REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 127 ; 0.181 ; 0.200
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 40 ; 0.181 ; 0.200
REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 3 ; 0.245 ; 0.200
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1714 ; 2.732 ; 2.000
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2802 ; 4.095 ; 3.000
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1121 ; 2.946 ; 2.000
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1057 ; 3.832 ; 3.000
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 2
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 35 A 135
REMARK 3 ORIGIN FOR THE GROUP (A): 42.6891 21.2295 4.0114
REMARK 3 T TENSOR
REMARK 3 T11: 0.2607 T22: 0.2133
REMARK 3 T33: 0.3590 T12: -0.1802
REMARK 3 T13: 0.0850 T23: -0.0466
REMARK 3 L TENSOR
REMARK 3 L11: 6.7083 L22: 4.4399
REMARK 3 L33: 4.1172 L12: 2.1256
REMARK 3 L13: 2.8082 L23: 1.9190
REMARK 3 S TENSOR
REMARK 3 S11: 0.4269 S12: -0.2325 S13: 0.2065
REMARK 3 S21: 0.3009 S22: -0.3230 S23: -0.5286
REMARK 3 S31: 0.0577 S32: 0.1870 S33: -0.1039
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 136 A 999
REMARK 3 ORIGIN FOR THE GROUP (A): 26.3261 11.3907 -15.3790
REMARK 3 T TENSOR
REMARK 3 T11: 0.4243 T22: 0.4305
REMARK 3 T33: 0.0485 T12: 0.1018
REMARK 3 T13: 0.1129 T23: 0.0360
REMARK 3 L TENSOR
REMARK 3 L11: 9.6736 L22: 9.9195
REMARK 3 L33: 1.3344 L12: 0.7098
REMARK 3 L13: -0.4200 L23: 1.3895
REMARK 3 S TENSOR
REMARK 3 S11: 0.1354 S12: 1.2604 S13: 0.0971
REMARK 3 S21: -1.1650 S22: 0.0455 S23: -0.5556
REMARK 3 S31: -0.1667 S32: -0.1874 S33: -0.1809
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : MASK
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.40
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 3GB2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-FEB-09.
REMARK 100 THE DEPOSITION ID IS D_1000051643.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 02-NOV-07
REMARK 200 TEMPERATURE (KELVIN) : 200
REMARK 200 PH : 7.0
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : ALS
REMARK 200 BEAMLINE : 5.0.3
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.0
REMARK 200 MONOCHROMATOR : SI 111 CHANNEL
REMARK 200 OPTICS : MIRRORS
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000
REMARK 200 DATA SCALING SOFTWARE : HKL-2000
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17512
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400
REMARK 200 RESOLUTION RANGE LOW (A) : 50.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 90.0
REMARK 200 DATA REDUNDANCY : 6.600
REMARK 200 R MERGE (I) : 0.06600
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.0000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.46
REMARK 200 COMPLETENESS FOR SHELL (%) : 63.8
REMARK 200 DATA REDUNDANCY IN SHELL : 6.00
REMARK 200 R MERGE FOR SHELL (I) : 0.30900
REMARK 200 R SYM FOR SHELL (I) : 0.30900
REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.000
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: AMORE
REMARK 200 STARTING MODEL: PDB ENTRY 3F88
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 59.62
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.05
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG MME 550, 0.1M HEPES, PH 7.0,
REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,-Y,Z+1/2
REMARK 290 3555 -X,Y,-Z+1/2
REMARK 290 4555 X,-Y,-Z
REMARK 290 5555 X+1/2,Y+1/2,Z
REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2
REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2
REMARK 290 8555 X+1/2,-Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.00550
REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.00550
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 42.65550
REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 52.03700
REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 42.65550
REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 52.03700
REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 55.00550
REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 42.65550
REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 52.03700
REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 55.00550
REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 42.65550
REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 52.03700
REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 GLY A 31
REMARK 465 ALA A 32
REMARK 465 MET A 33
REMARK 465 GLY A 34
REMARK 465 GLY A 120
REMARK 465 GLU A 121
REMARK 465 LYS A 122
REMARK 465 LYS A 123
REMARK 465 ASP A 124
REMARK 465 ASN A 287
REMARK 465 TYR A 288
REMARK 465 THR A 289
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O ILE A 378 NH2 ARG A 383 1.90
REMARK 500 O TRP A 301 N LYS A 303 2.00
REMARK 500 NZ LYS A 205 OD1 ASN A 213 2.14
REMARK 500 O SER A 338 N PHE A 340 2.16
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION
REMARK 500 TYR A 140 CE1 TYR A 140 CZ 0.081
REMARK 500 PRO A 286 C PRO A 286 O 0.171
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 GLN A 46 -166.02 -111.74
REMARK 500 ASP A 49 73.14 -69.73
REMARK 500 ASP A 90 16.73 -58.78
REMARK 500 LYS A 91 -64.79 49.64
REMARK 500 LYS A 150 58.11 39.61
REMARK 500 ASP A 181 45.67 -161.67
REMARK 500 ASP A 200 94.36 57.81
REMARK 500 SER A 203 24.53 -151.93
REMARK 500 CYS A 218 160.91 67.46
REMARK 500 THR A 235 -167.19 -125.96
REMARK 500 PRO A 258 79.92 -101.49
REMARK 500 ARG A 278 -90.31 -12.76
REMARK 500 ASN A 285 129.12 169.04
REMARK 500 PHE A 291 -165.93 -76.84
REMARK 500 LYS A 292 83.91 -171.33
REMARK 500 ALA A 298 95.73 -68.17
REMARK 500 THR A 302 28.35 -51.01
REMARK 500 LYS A 303 -13.32 -155.08
REMARK 500 PHE A 305 -139.97 -104.64
REMARK 500 LEU A 316 -72.65 -60.60
REMARK 500 CYS A 317 -71.54 -39.86
REMARK 500 SER A 318 -42.48 -28.20
REMARK 500 LEU A 320 -106.47 -78.50
REMARK 500 LEU A 321 68.55 -13.83
REMARK 500 TYR A 323 -71.89 -64.68
REMARK 500 HIS A 337 126.95 -32.12
REMARK 500 SER A 338 -71.01 -20.04
REMARK 500 PHE A 339 -40.49 -15.62
REMARK 500 VAL A 348 135.41 -30.04
REMARK 500 PRO A 351 -35.22 -38.76
REMARK 500 ASN A 361 54.79 -67.62
REMARK 500 LEU A 373 18.92 -175.96
REMARK 500 THR A 375 -4.81 -57.52
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE G3B A 999
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 3F7Z RELATED DB: PDB
REMARK 900 RELATED ID: 3F88 RELATED DB: PDB
DBREF 3GB2 A 34 383 UNP P49841 GSK3B_HUMAN 34 383
SEQADV 3GB2 GLY A 31 UNP P49841 EXPRESSION TAG
SEQADV 3GB2 ALA A 32 UNP P49841 EXPRESSION TAG
SEQADV 3GB2 MET A 33 UNP P49841 EXPRESSION TAG
SEQRES 1 A 353 GLY ALA MET GLY SER LYS VAL THR THR VAL VAL ALA THR
SEQRES 2 A 353 PRO GLY GLN GLY PRO ASP ARG PRO GLN GLU VAL SER TYR
SEQRES 3 A 353 THR ASP THR LYS VAL ILE GLY ASN GLY SER PHE GLY VAL
SEQRES 4 A 353 VAL TYR GLN ALA LYS LEU CYS ASP SER GLY GLU LEU VAL
SEQRES 5 A 353 ALA ILE LYS LYS VAL LEU GLN ASP LYS ARG PHE LYS ASN
SEQRES 6 A 353 ARG GLU LEU GLN ILE MET ARG LYS LEU ASP HIS CYS ASN
SEQRES 7 A 353 ILE VAL ARG LEU ARG TYR PHE PHE TYR SER SER GLY GLU
SEQRES 8 A 353 LYS LYS ASP GLU VAL TYR LEU ASN LEU VAL LEU ASP TYR
SEQRES 9 A 353 VAL PRO GLU THR VAL TYR ARG VAL ALA ARG HIS TYR SER
SEQRES 10 A 353 ARG ALA LYS GLN THR LEU PRO VAL ILE TYR VAL LYS LEU
SEQRES 11 A 353 TYR MET TYR GLN LEU PHE ARG SER LEU ALA TYR ILE HIS
SEQRES 12 A 353 SER PHE GLY ILE CYS HIS ARG ASP ILE LYS PRO GLN ASN
SEQRES 13 A 353 LEU LEU LEU ASP PRO ASP THR ALA VAL LEU LYS LEU CYS
SEQRES 14 A 353 ASP PHE GLY SER ALA LYS GLN LEU VAL ARG GLY GLU PRO
SEQRES 15 A 353 ASN VAL SER PTR ILE CYS SER ARG TYR TYR ARG ALA PRO
SEQRES 16 A 353 GLU LEU ILE PHE GLY ALA THR ASP TYR THR SER SER ILE
SEQRES 17 A 353 ASP VAL TRP SER ALA GLY CYS VAL LEU ALA GLU LEU LEU
SEQRES 18 A 353 LEU GLY GLN PRO ILE PHE PRO GLY ASP SER GLY VAL ASP
SEQRES 19 A 353 GLN LEU VAL GLU ILE ILE LYS VAL LEU GLY THR PRO THR
SEQRES 20 A 353 ARG GLU GLN ILE ARG GLU MET ASN PRO ASN TYR THR GLU
SEQRES 21 A 353 PHE LYS PHE PRO GLN ILE LYS ALA HIS PRO TRP THR LYS
SEQRES 22 A 353 VAL PHE ARG PRO ARG THR PRO PRO GLU ALA ILE ALA LEU
SEQRES 23 A 353 CYS SER ARG LEU LEU GLU TYR THR PRO THR ALA ARG LEU
SEQRES 24 A 353 THR PRO LEU GLU ALA CYS ALA HIS SER PHE PHE ASP GLU
SEQRES 25 A 353 LEU ARG ASP PRO ASN VAL LYS LEU PRO ASN GLY ARG ASP
SEQRES 26 A 353 THR PRO ALA LEU PHE ASN PHE THR THR GLN GLU LEU SER
SEQRES 27 A 353 SER ASN PRO PRO LEU ALA THR ILE LEU ILE PRO PRO HIS
SEQRES 28 A 353 ALA ARG
MODRES 3GB2 PTR A 216 TYR O-PHOSPHOTYROSINE
HET PTR A 216 16
HET G3B A 999 24
HETNAM PTR O-PHOSPHOTYROSINE
HETNAM G3B 2-METHYL-5-(3-{4-[(S)-METHYLSULFINYL]PHENYL}-1-
HETNAM 2 G3B BENZOFURAN-5-YL)-1,3,4-OXADIAZOLE
HETSYN PTR PHOSPHONOTYROSINE
FORMUL 1 PTR C9 H12 N O6 P
FORMUL 2 G3B C18 H14 N2 O3 S
FORMUL 3 HOH *66(H2 O)
HELIX 1 1 ASN A 95 LYS A 103 1 9
HELIX 2 2 VAL A 139 ALA A 149 1 11
HELIX 3 3 PRO A 154 PHE A 175 1 22
HELIX 4 4 LYS A 183 GLN A 185 5 3
HELIX 5 5 SER A 219 ARG A 223 5 5
HELIX 6 6 ALA A 224 GLY A 230 1 7
HELIX 7 7 SER A 236 GLY A 253 1 18
HELIX 8 8 VAL A 263 GLY A 274 1 12
HELIX 9 9 THR A 277 ASN A 285 1 9
HELIX 10 10 PRO A 310 LEU A 320 1 11
HELIX 11 11 THR A 330 HIS A 337 1 8
HELIX 12 12 SER A 338 ASP A 345 5 8
HELIX 13 13 THR A 363 SER A 368 1 6
HELIX 14 14 LEU A 373 LEU A 377 5 5
HELIX 15 15 PRO A 379 ARG A 383 5 5
SHEET 1 A 7 THR A 38 PRO A 44 0
SHEET 2 A 7 GLN A 52 ASN A 64 -1 O GLN A 52 N ALA A 42
SHEET 3 A 7 VAL A 69 LEU A 75 -1 O VAL A 70 N ILE A 62
SHEET 4 A 7 LEU A 81 LYS A 86 -1 O LYS A 86 N VAL A 69
SHEET 5 A 7 TYR A 127 ASP A 133 -1 O LEU A 132 N ALA A 83
SHEET 6 A 7 LEU A 112 SER A 118 -1 N PHE A 116 O ASN A 129
SHEET 7 A 7 THR A 38 PRO A 44 -1 N THR A 43 O PHE A 115
SHEET 1 B 3 GLU A 137 THR A 138 0
SHEET 2 B 3 LEU A 187 LEU A 189 -1 O LEU A 189 N GLU A 137
SHEET 3 B 3 LEU A 196 LEU A 198 -1 O LYS A 197 N LEU A 188
SHEET 1 C 2 ILE A 177 CYS A 178 0
SHEET 2 C 2 LYS A 205 GLN A 206 -1 O LYS A 205 N CYS A 178
LINK C SER A 215 N PTR A 216 1555 1555 1.33
LINK C PTR A 216 N ILE A 217 1555 1555 1.33
SITE 1 AC1 15 ILE A 62 PHE A 67 VAL A 70 ALA A 83
SITE 2 AC1 15 LYS A 85 LEU A 132 ASP A 133 TYR A 134
SITE 3 AC1 15 VAL A 135 THR A 138 ARG A 141 LEU A 188
SITE 4 AC1 15 ASP A 200 HOH A1000 HOH A1078
CRYST1 85.311 104.074 110.011 90.00 90.00 90.00 C 2 2 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.011722 0.000000 0.000000 0.00000
SCALE2 0.000000 0.009609 0.000000 0.00000
SCALE3 0.000000 0.000000 0.009090 0.00000