HEADER TRANSFERASE 18-FEB-09 3GB2 TITLE GSK3BETA INHIBITOR COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOGEN SYNTHASE KINASE-3 BETA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GSK-3 BETA; COMPND 5 EC: 2.7.11.26; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GSK3B, GSK3BETA; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HI5; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PFASTBAC KEYWDS PROTEIN KINASE, INHIBITOR, COMPLEX, ATP-BINDING, KINASE, NUCLEOTIDE- KEYWDS 2 BINDING, PHOSPHOPROTEIN, SERINE/THREONINE-PROTEIN KINASE, KEYWDS 3 TRANSFERASE, WNT SIGNALING PATHWAY, CDM EXPDTA X-RAY DIFFRACTION AUTHOR C.D.MOL REVDAT 5 06-NOV-24 3GB2 1 REMARK REVDAT 4 22-NOV-23 3GB2 1 REMARK REVDAT 3 06-SEP-23 3GB2 1 REMARK LINK REVDAT 2 13-JUL-11 3GB2 1 VERSN REVDAT 1 02-MAR-10 3GB2 0 JRNL AUTH M.SAITOH,J.KUNITOMO,E.KIMURA,H.IWASHITA,Y.UNO,T.ONISHI, JRNL AUTH 2 N.UCHIYAMA,T.KAWAMOTO,T.TANAKA,C.D.MOL,D.R.DOUGAN, JRNL AUTH 3 G.P.TEXTOR,G.P.SNELL,M.TAKIZAWA,F.ITOH,M.KORI JRNL TITL 2-{3-[4-(ALKYLSULFINYL) JRNL TITL 2 PHENYL]-1-BENZOFURAN-5-YL}-5-METHYL-1,3,4-OXADIAZOLE JRNL TITL 3 DERIVATIVES AS NOVEL INHIBITORS OF GLYCOGEN SYNTHASE JRNL TITL 4 KINASE-3BETA WITH GOOD BRAIN PERMEABILITY. JRNL REF J.MED.CHEM. V. 52 6270 2009 JRNL REFN ISSN 0022-2623 JRNL PMID 19775160 JRNL DOI 10.1021/JM900647E REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 89.9 REMARK 3 NUMBER OF REFLECTIONS : 16542 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.289 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 911 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 815 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 63.38 REMARK 3 BIN R VALUE (WORKING SET) : 0.2840 REMARK 3 BIN FREE R VALUE SET COUNT : 52 REMARK 3 BIN FREE R VALUE : 0.2970 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2734 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 66 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.87000 REMARK 3 B22 (A**2) : -4.81000 REMARK 3 B33 (A**2) : 9.67000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.414 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.303 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.271 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 25.445 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.908 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2835 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3859 ; 1.396 ; 1.992 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 338 ; 6.164 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 125 ;34.603 ;22.960 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 473 ;18.193 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;18.133 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 431 ; 0.086 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2151 ; 0.007 ; 0.022 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1373 ; 0.220 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1930 ; 0.314 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 127 ; 0.181 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 40 ; 0.181 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 3 ; 0.245 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1714 ; 2.732 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2802 ; 4.095 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1121 ; 2.946 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1057 ; 3.832 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 35 A 135 REMARK 3 ORIGIN FOR THE GROUP (A): 42.6891 21.2295 4.0114 REMARK 3 T TENSOR REMARK 3 T11: 0.2607 T22: 0.2133 REMARK 3 T33: 0.3590 T12: -0.1802 REMARK 3 T13: 0.0850 T23: -0.0466 REMARK 3 L TENSOR REMARK 3 L11: 6.7083 L22: 4.4399 REMARK 3 L33: 4.1172 L12: 2.1256 REMARK 3 L13: 2.8082 L23: 1.9190 REMARK 3 S TENSOR REMARK 3 S11: 0.4269 S12: -0.2325 S13: 0.2065 REMARK 3 S21: 0.3009 S22: -0.3230 S23: -0.5286 REMARK 3 S31: 0.0577 S32: 0.1870 S33: -0.1039 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 136 A 999 REMARK 3 ORIGIN FOR THE GROUP (A): 26.3261 11.3907 -15.3790 REMARK 3 T TENSOR REMARK 3 T11: 0.4243 T22: 0.4305 REMARK 3 T33: 0.0485 T12: 0.1018 REMARK 3 T13: 0.1129 T23: 0.0360 REMARK 3 L TENSOR REMARK 3 L11: 9.6736 L22: 9.9195 REMARK 3 L33: 1.3344 L12: 0.7098 REMARK 3 L13: -0.4200 L23: 1.3895 REMARK 3 S TENSOR REMARK 3 S11: 0.1354 S12: 1.2604 S13: 0.0971 REMARK 3 S21: -1.1650 S22: 0.0455 S23: -0.5556 REMARK 3 S31: -0.1667 S32: -0.1874 S33: -0.1809 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3GB2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-FEB-09. REMARK 100 THE DEPOSITION ID IS D_1000051643. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-NOV-07 REMARK 200 TEMPERATURE (KELVIN) : 200 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17512 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.0 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.46 REMARK 200 COMPLETENESS FOR SHELL (%) : 63.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : 0.30900 REMARK 200 R SYM FOR SHELL (I) : 0.30900 REMARK 200 FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 3F88 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG MME 550, 0.1M HEPES, PH 7.0, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.00550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.00550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 42.65550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 52.03700 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 42.65550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 52.03700 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 55.00550 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 42.65550 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 52.03700 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 55.00550 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 42.65550 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 52.03700 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 31 REMARK 465 ALA A 32 REMARK 465 MET A 33 REMARK 465 GLY A 34 REMARK 465 GLY A 120 REMARK 465 GLU A 121 REMARK 465 LYS A 122 REMARK 465 LYS A 123 REMARK 465 ASP A 124 REMARK 465 ASN A 287 REMARK 465 TYR A 288 REMARK 465 THR A 289 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ILE A 378 NH2 ARG A 383 1.90 REMARK 500 O TRP A 301 N LYS A 303 2.00 REMARK 500 NZ LYS A 205 OD1 ASN A 213 2.14 REMARK 500 O SER A 338 N PHE A 340 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TYR A 140 CE1 TYR A 140 CZ 0.081 REMARK 500 PRO A 286 C PRO A 286 O 0.171 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 46 -166.02 -111.74 REMARK 500 ASP A 49 73.14 -69.73 REMARK 500 ASP A 90 16.73 -58.78 REMARK 500 LYS A 91 -64.79 49.64 REMARK 500 LYS A 150 58.11 39.61 REMARK 500 ASP A 181 45.67 -161.67 REMARK 500 ASP A 200 94.36 57.81 REMARK 500 SER A 203 24.53 -151.93 REMARK 500 CYS A 218 160.91 67.46 REMARK 500 THR A 235 -167.19 -125.96 REMARK 500 PRO A 258 79.92 -101.49 REMARK 500 ARG A 278 -90.31 -12.76 REMARK 500 ASN A 285 129.12 169.04 REMARK 500 PHE A 291 -165.93 -76.84 REMARK 500 LYS A 292 83.91 -171.33 REMARK 500 ALA A 298 95.73 -68.17 REMARK 500 THR A 302 28.35 -51.01 REMARK 500 LYS A 303 -13.32 -155.08 REMARK 500 PHE A 305 -139.97 -104.64 REMARK 500 LEU A 316 -72.65 -60.60 REMARK 500 CYS A 317 -71.54 -39.86 REMARK 500 SER A 318 -42.48 -28.20 REMARK 500 LEU A 320 -106.47 -78.50 REMARK 500 LEU A 321 68.55 -13.83 REMARK 500 TYR A 323 -71.89 -64.68 REMARK 500 HIS A 337 126.95 -32.12 REMARK 500 SER A 338 -71.01 -20.04 REMARK 500 PHE A 339 -40.49 -15.62 REMARK 500 VAL A 348 135.41 -30.04 REMARK 500 PRO A 351 -35.22 -38.76 REMARK 500 ASN A 361 54.79 -67.62 REMARK 500 LEU A 373 18.92 -175.96 REMARK 500 THR A 375 -4.81 -57.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE G3B A 999 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3F7Z RELATED DB: PDB REMARK 900 RELATED ID: 3F88 RELATED DB: PDB DBREF 3GB2 A 34 383 UNP P49841 GSK3B_HUMAN 34 383 SEQADV 3GB2 GLY A 31 UNP P49841 EXPRESSION TAG SEQADV 3GB2 ALA A 32 UNP P49841 EXPRESSION TAG SEQADV 3GB2 MET A 33 UNP P49841 EXPRESSION TAG SEQRES 1 A 353 GLY ALA MET GLY SER LYS VAL THR THR VAL VAL ALA THR SEQRES 2 A 353 PRO GLY GLN GLY PRO ASP ARG PRO GLN GLU VAL SER TYR SEQRES 3 A 353 THR ASP THR LYS VAL ILE GLY ASN GLY SER PHE GLY VAL SEQRES 4 A 353 VAL TYR GLN ALA LYS LEU CYS ASP SER GLY GLU LEU VAL SEQRES 5 A 353 ALA ILE LYS LYS VAL LEU GLN ASP LYS ARG PHE LYS ASN SEQRES 6 A 353 ARG GLU LEU GLN ILE MET ARG LYS LEU ASP HIS CYS ASN SEQRES 7 A 353 ILE VAL ARG LEU ARG TYR PHE PHE TYR SER SER GLY GLU SEQRES 8 A 353 LYS LYS ASP GLU VAL TYR LEU ASN LEU VAL LEU ASP TYR SEQRES 9 A 353 VAL PRO GLU THR VAL TYR ARG VAL ALA ARG HIS TYR SER SEQRES 10 A 353 ARG ALA LYS GLN THR LEU PRO VAL ILE TYR VAL LYS LEU SEQRES 11 A 353 TYR MET TYR GLN LEU PHE ARG SER LEU ALA TYR ILE HIS SEQRES 12 A 353 SER PHE GLY ILE CYS HIS ARG ASP ILE LYS PRO GLN ASN SEQRES 13 A 353 LEU LEU LEU ASP PRO ASP THR ALA VAL LEU LYS LEU CYS SEQRES 14 A 353 ASP PHE GLY SER ALA LYS GLN LEU VAL ARG GLY GLU PRO SEQRES 15 A 353 ASN VAL SER PTR ILE CYS SER ARG TYR TYR ARG ALA PRO SEQRES 16 A 353 GLU LEU ILE PHE GLY ALA THR ASP TYR THR SER SER ILE SEQRES 17 A 353 ASP VAL TRP SER ALA GLY CYS VAL LEU ALA GLU LEU LEU SEQRES 18 A 353 LEU GLY GLN PRO ILE PHE PRO GLY ASP SER GLY VAL ASP SEQRES 19 A 353 GLN LEU VAL GLU ILE ILE LYS VAL LEU GLY THR PRO THR SEQRES 20 A 353 ARG GLU GLN ILE ARG GLU MET ASN PRO ASN TYR THR GLU SEQRES 21 A 353 PHE LYS PHE PRO GLN ILE LYS ALA HIS PRO TRP THR LYS SEQRES 22 A 353 VAL PHE ARG PRO ARG THR PRO PRO GLU ALA ILE ALA LEU SEQRES 23 A 353 CYS SER ARG LEU LEU GLU TYR THR PRO THR ALA ARG LEU SEQRES 24 A 353 THR PRO LEU GLU ALA CYS ALA HIS SER PHE PHE ASP GLU SEQRES 25 A 353 LEU ARG ASP PRO ASN VAL LYS LEU PRO ASN GLY ARG ASP SEQRES 26 A 353 THR PRO ALA LEU PHE ASN PHE THR THR GLN GLU LEU SER SEQRES 27 A 353 SER ASN PRO PRO LEU ALA THR ILE LEU ILE PRO PRO HIS SEQRES 28 A 353 ALA ARG MODRES 3GB2 PTR A 216 TYR O-PHOSPHOTYROSINE HET PTR A 216 16 HET G3B A 999 24 HETNAM PTR O-PHOSPHOTYROSINE HETNAM G3B 2-METHYL-5-(3-{4-[(S)-METHYLSULFINYL]PHENYL}-1- HETNAM 2 G3B BENZOFURAN-5-YL)-1,3,4-OXADIAZOLE HETSYN PTR PHOSPHONOTYROSINE FORMUL 1 PTR C9 H12 N O6 P FORMUL 2 G3B C18 H14 N2 O3 S FORMUL 3 HOH *66(H2 O) HELIX 1 1 ASN A 95 LYS A 103 1 9 HELIX 2 2 VAL A 139 ALA A 149 1 11 HELIX 3 3 PRO A 154 PHE A 175 1 22 HELIX 4 4 LYS A 183 GLN A 185 5 3 HELIX 5 5 SER A 219 ARG A 223 5 5 HELIX 6 6 ALA A 224 GLY A 230 1 7 HELIX 7 7 SER A 236 GLY A 253 1 18 HELIX 8 8 VAL A 263 GLY A 274 1 12 HELIX 9 9 THR A 277 ASN A 285 1 9 HELIX 10 10 PRO A 310 LEU A 320 1 11 HELIX 11 11 THR A 330 HIS A 337 1 8 HELIX 12 12 SER A 338 ASP A 345 5 8 HELIX 13 13 THR A 363 SER A 368 1 6 HELIX 14 14 LEU A 373 LEU A 377 5 5 HELIX 15 15 PRO A 379 ARG A 383 5 5 SHEET 1 A 7 THR A 38 PRO A 44 0 SHEET 2 A 7 GLN A 52 ASN A 64 -1 O GLN A 52 N ALA A 42 SHEET 3 A 7 VAL A 69 LEU A 75 -1 O VAL A 70 N ILE A 62 SHEET 4 A 7 LEU A 81 LYS A 86 -1 O LYS A 86 N VAL A 69 SHEET 5 A 7 TYR A 127 ASP A 133 -1 O LEU A 132 N ALA A 83 SHEET 6 A 7 LEU A 112 SER A 118 -1 N PHE A 116 O ASN A 129 SHEET 7 A 7 THR A 38 PRO A 44 -1 N THR A 43 O PHE A 115 SHEET 1 B 3 GLU A 137 THR A 138 0 SHEET 2 B 3 LEU A 187 LEU A 189 -1 O LEU A 189 N GLU A 137 SHEET 3 B 3 LEU A 196 LEU A 198 -1 O LYS A 197 N LEU A 188 SHEET 1 C 2 ILE A 177 CYS A 178 0 SHEET 2 C 2 LYS A 205 GLN A 206 -1 O LYS A 205 N CYS A 178 LINK C SER A 215 N PTR A 216 1555 1555 1.33 LINK C PTR A 216 N ILE A 217 1555 1555 1.33 SITE 1 AC1 15 ILE A 62 PHE A 67 VAL A 70 ALA A 83 SITE 2 AC1 15 LYS A 85 LEU A 132 ASP A 133 TYR A 134 SITE 3 AC1 15 VAL A 135 THR A 138 ARG A 141 LEU A 188 SITE 4 AC1 15 ASP A 200 HOH A1000 HOH A1078 CRYST1 85.311 104.074 110.011 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011722 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009609 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009090 0.00000