HEADER TRANSFERASE 20-FEB-09 3GC0 TITLE STRUCTURE OF THE CMGC CDK KINASE FROM GIARDIA LAMBLIA IN COMPLEX WITH TITLE 2 AMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: KINASE, CMGC CDK; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GIARDIA LAMBLIA; SOURCE 3 ORGANISM_TAXID: 184922; SOURCE 4 STRAIN: ATCC 50803; SOURCE 5 GENE: GL50803_8037; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: AVA0421 KEYWDS SSGCID, KINASE, CMGC CDK, AMP, ATP-BINDING, NUCLEOTIDE-BINDING, KEYWDS 2 SERINE/THREONINE-PROTEIN KINASE, TRANSFERASE, STRUCTURAL GENOMICS, KEYWDS 3 SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 4 06-SEP-23 3GC0 1 REMARK REVDAT 3 21-SEP-11 3GC0 1 JRNL REVDAT 2 13-JUL-11 3GC0 1 VERSN REVDAT 1 24-MAR-09 3GC0 0 JRNL AUTH D.J.LEIBLY,P.A.NEWLING,J.ABENDROTH,W.GUO,A.KELLEY, JRNL AUTH 2 L.J.STEWART,W.VAN VOORHIS JRNL TITL STRUCTURE OF A CYCLIN-DEPENDENT KINASE FROM GIARDIA LAMBLIA. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 67 1084 2011 JRNL REFN ESSN 1744-3091 JRNL PMID 21904054 JRNL DOI 10.1107/S1744309111018070 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0070 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.30 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 20333 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.265 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1029 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1319 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.80 REMARK 3 BIN R VALUE (WORKING SET) : 0.2570 REMARK 3 BIN FREE R VALUE SET COUNT : 60 REMARK 3 BIN FREE R VALUE : 0.2870 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2186 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 23 REMARK 3 SOLVENT ATOMS : 144 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.41 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.00000 REMARK 3 B22 (A**2) : 2.04000 REMARK 3 B33 (A**2) : -1.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.197 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.190 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.129 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.597 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.914 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2287 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1563 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3108 ; 1.608 ; 1.993 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3811 ; 0.939 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 280 ; 5.668 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 92 ;35.255 ;23.043 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 397 ;14.643 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;23.646 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 358 ; 0.095 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2475 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 467 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1401 ; 1.092 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 558 ; 0.238 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2259 ; 1.962 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 886 ; 2.643 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 847 ; 4.292 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 4 REMARK 4 3GC0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-FEB-09. REMARK 100 THE DEPOSITION ID IS D_1000051675. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JAN-09 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20333 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.4400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.65000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MR REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1OIT MODIFIED BY CCP4 PROGRAM CHAINSAW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 200MM NA MALONATE, 0.4UL REMARK 280 + 0.4UL PROTEIN AT 27 MG/ML, PH 6.5, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 290K, PH 6.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.62000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.69000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.59000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 37.69000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.62000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 36.59000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYMMETRIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 ALA A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 MET A -12 REMARK 465 GLY A -11 REMARK 465 THR A -10 REMARK 465 LEU A -9 REMARK 465 GLU A -8 REMARK 465 ALA A -7 REMARK 465 GLN A -6 REMARK 465 THR A -5 REMARK 465 GLN A -4 REMARK 465 GLY A -3 REMARK 465 PRO A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 VAL A 3 REMARK 465 SER A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 PRO A 7 REMARK 465 SER A 8 REMARK 465 ALA A 9 REMARK 465 THR A 10 REMARK 465 GLU A 51 REMARK 465 GLU A 52 REMARK 465 GLU A 53 REMARK 465 GLY A 54 REMARK 465 VAL A 55 REMARK 465 PRO A 56 REMARK 465 GLY A 57 REMARK 465 SER A 147 REMARK 465 ASP A 148 REMARK 465 ALA A 149 REMARK 465 SER A 150 REMARK 465 GLY A 167 REMARK 465 ILE A 168 REMARK 465 PRO A 169 REMARK 465 ILE A 170 REMARK 465 ARG A 171 REMARK 465 GLN A 172 REMARK 465 PHE A 173 REMARK 465 THR A 174 REMARK 465 HIS A 175 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 38 CG OD1 ND2 REMARK 470 LEU A 48 CG CD1 CD2 REMARK 470 GLU A 49 CG CD OE1 OE2 REMARK 470 HIS A 50 CG ND1 CD2 CE1 NE2 REMARK 470 THR A 58 OG1 CG2 REMARK 470 GLU A 62 CG CD OE1 OE2 REMARK 470 HIS A 82 CG ND1 CD2 CE1 NE2 REMARK 470 HIS A 83 CG ND1 CD2 CE1 NE2 REMARK 470 ASN A 84 CG OD1 ND2 REMARK 470 HIS A 85 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 95 CG CD OE1 OE2 REMARK 470 LYS A 99 CG CD CE NZ REMARK 470 ARG A 131 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 135 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 140 CG CD OE1 NE2 REMARK 470 GLU A 151 CG CD OE1 OE2 REMARK 470 GLU A 176 CG CD OE1 OE2 REMARK 470 THR A 179 OG1 CG2 REMARK 470 ARG A 192 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 193 CG ND1 CD2 CE1 NE2 REMARK 470 GLN A 252 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O1P AMP A 309 O HOH A 334 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 107 CB - CG - OD1 ANGL. DEV. = 7.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 48 -143.84 -109.23 REMARK 500 GLU A 49 120.03 86.73 REMARK 500 ARG A 135 -14.00 77.29 REMARK 500 ASP A 136 45.24 -141.91 REMARK 500 ARG A 164 -70.76 -74.16 REMARK 500 TRP A 241 81.05 -151.44 REMARK 500 THR A 261 142.49 87.36 REMARK 500 LEU A 266 11.95 -149.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AMP A 309 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: GILAA.00333.A RELATED DB: TARGETDB DBREF 3GC0 A 1 308 UNP A8BZ95 A8BZ95_GIALA 1 308 SEQADV 3GC0 MET A -20 UNP A8BZ95 EXPRESSION TAG SEQADV 3GC0 ALA A -19 UNP A8BZ95 EXPRESSION TAG SEQADV 3GC0 HIS A -18 UNP A8BZ95 EXPRESSION TAG SEQADV 3GC0 HIS A -17 UNP A8BZ95 EXPRESSION TAG SEQADV 3GC0 HIS A -16 UNP A8BZ95 EXPRESSION TAG SEQADV 3GC0 HIS A -15 UNP A8BZ95 EXPRESSION TAG SEQADV 3GC0 HIS A -14 UNP A8BZ95 EXPRESSION TAG SEQADV 3GC0 HIS A -13 UNP A8BZ95 EXPRESSION TAG SEQADV 3GC0 MET A -12 UNP A8BZ95 EXPRESSION TAG SEQADV 3GC0 GLY A -11 UNP A8BZ95 EXPRESSION TAG SEQADV 3GC0 THR A -10 UNP A8BZ95 EXPRESSION TAG SEQADV 3GC0 LEU A -9 UNP A8BZ95 EXPRESSION TAG SEQADV 3GC0 GLU A -8 UNP A8BZ95 EXPRESSION TAG SEQADV 3GC0 ALA A -7 UNP A8BZ95 EXPRESSION TAG SEQADV 3GC0 GLN A -6 UNP A8BZ95 EXPRESSION TAG SEQADV 3GC0 THR A -5 UNP A8BZ95 EXPRESSION TAG SEQADV 3GC0 GLN A -4 UNP A8BZ95 EXPRESSION TAG SEQADV 3GC0 GLY A -3 UNP A8BZ95 EXPRESSION TAG SEQADV 3GC0 PRO A -2 UNP A8BZ95 EXPRESSION TAG SEQADV 3GC0 GLY A -1 UNP A8BZ95 EXPRESSION TAG SEQADV 3GC0 SER A 0 UNP A8BZ95 EXPRESSION TAG SEQRES 1 A 329 MET ALA HIS HIS HIS HIS HIS HIS MET GLY THR LEU GLU SEQRES 2 A 329 ALA GLN THR GLN GLY PRO GLY SER MET SER VAL SER ALA SEQRES 3 A 329 ALA PRO SER ALA THR SER ILE ASP ARG TYR ARG ARG ILE SEQRES 4 A 329 THR LYS LEU GLY GLU GLY THR TYR GLY GLU VAL TYR LYS SEQRES 5 A 329 ALA ILE ASP THR VAL THR ASN GLU THR VAL ALA ILE LYS SEQRES 6 A 329 ARG ILE ARG LEU GLU HIS GLU GLU GLU GLY VAL PRO GLY SEQRES 7 A 329 THR ALA ILE ARG GLU VAL SER LEU LEU LYS GLU LEU GLN SEQRES 8 A 329 HIS ARG ASN ILE ILE GLU LEU LYS SER VAL ILE HIS HIS SEQRES 9 A 329 ASN HIS ARG LEU HIS LEU ILE PHE GLU TYR ALA GLU ASN SEQRES 10 A 329 ASP LEU LYS LYS TYR MET ASP LYS ASN PRO ASP VAL SER SEQRES 11 A 329 MET ARG VAL ILE LYS SER PHE LEU TYR GLN LEU ILE ASN SEQRES 12 A 329 GLY VAL ASN PHE CYS HIS SER ARG ARG CYS LEU HIS ARG SEQRES 13 A 329 ASP LEU LYS PRO GLN ASN LEU LEU LEU SER VAL SER ASP SEQRES 14 A 329 ALA SER GLU THR PRO VAL LEU LYS ILE GLY ASP PHE GLY SEQRES 15 A 329 LEU ALA ARG ALA PHE GLY ILE PRO ILE ARG GLN PHE THR SEQRES 16 A 329 HIS GLU ILE ILE THR LEU TRP TYR ARG PRO PRO GLU ILE SEQRES 17 A 329 LEU LEU GLY SER ARG HIS TYR SER THR SER VAL ASP ILE SEQRES 18 A 329 TRP SER ILE ALA CYS ILE TRP ALA GLU MET LEU MET LYS SEQRES 19 A 329 THR PRO LEU PHE PRO GLY ASP SER GLU ILE ASP GLN LEU SEQRES 20 A 329 PHE LYS ILE PHE GLU VAL LEU GLY LEU PRO ASP ASP THR SEQRES 21 A 329 THR TRP PRO GLY VAL THR ALA LEU PRO ASP TRP LYS GLN SEQRES 22 A 329 SER PHE PRO LYS PHE ARG GLY LYS THR LEU LYS ARG VAL SEQRES 23 A 329 LEU GLY ALA LEU LEU ASP ASP GLU GLY LEU ASP LEU LEU SEQRES 24 A 329 THR ALA MET LEU GLU MET ASP PRO VAL LYS ARG ILE SER SEQRES 25 A 329 ALA LYS ASN ALA LEU GLU HIS PRO TYR PHE SER HIS ASN SEQRES 26 A 329 ASP PHE ASP PRO HET AMP A 309 23 HETNAM AMP ADENOSINE MONOPHOSPHATE FORMUL 2 AMP C10 H14 N5 O7 P FORMUL 3 HOH *144(H2 O) HELIX 1 1 SER A 11 ASP A 13 5 3 HELIX 2 2 THR A 58 LEU A 66 1 9 HELIX 3 3 LYS A 67 LEU A 69 5 3 HELIX 4 4 LEU A 98 ASN A 105 1 8 HELIX 5 5 SER A 109 ARG A 130 1 22 HELIX 6 6 LYS A 138 GLN A 140 5 3 HELIX 7 7 GLY A 161 PHE A 166 1 6 HELIX 8 8 GLU A 176 ARG A 183 5 8 HELIX 9 9 PRO A 184 LEU A 189 1 6 HELIX 10 10 THR A 196 LYS A 213 1 18 HELIX 11 11 SER A 221 GLY A 234 1 14 HELIX 12 12 GLY A 243 LEU A 247 5 5 HELIX 13 13 THR A 261 GLY A 267 1 7 HELIX 14 14 ALA A 268 LEU A 270 5 3 HELIX 15 15 ASP A 271 LEU A 282 1 12 HELIX 16 16 ASP A 285 ARG A 289 5 5 HELIX 17 17 SER A 291 HIS A 298 1 8 HELIX 18 18 PRO A 299 SER A 302 5 4 SHEET 1 A 5 TYR A 15 GLU A 23 0 SHEET 2 A 5 GLU A 28 ASP A 34 -1 O VAL A 29 N GLY A 22 SHEET 3 A 5 THR A 40 ILE A 46 -1 O ILE A 43 N TYR A 30 SHEET 4 A 5 ARG A 86 GLU A 92 -1 O PHE A 91 N ALA A 42 SHEET 5 A 5 LEU A 77 HIS A 83 -1 N ILE A 81 O HIS A 88 SHEET 1 B 3 ASN A 96 ASP A 97 0 SHEET 2 B 3 LEU A 142 SER A 145 -1 O LEU A 144 N ASN A 96 SHEET 3 B 3 VAL A 154 ILE A 157 -1 O VAL A 154 N SER A 145 SITE 1 AC1 17 LEU A 21 GLU A 23 GLY A 24 VAL A 29 SITE 2 AC1 17 ALA A 42 LYS A 44 GLU A 92 TYR A 93 SITE 3 AC1 17 ALA A 94 LEU A 143 HOH A 325 HOH A 334 SITE 4 AC1 17 HOH A 362 HOH A 394 HOH A 413 HOH A 415 SITE 5 AC1 17 HOH A 446 CRYST1 53.240 73.180 75.380 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018783 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013665 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013266 0.00000