HEADER CHAPERONE 24-FEB-09 3GDQ TITLE CRYSTAL STRUCTURE OF THE HUMAN 70KDA HEAT SHOCK PROTEIN 1-LIKE ATPASE TITLE 2 DOMAIN IN COMPLEX WITH ADP AND INORGANIC PHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEAT SHOCK 70 KDA PROTEIN 1-LIKE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ATPASE DOMAIN; COMPND 5 SYNONYM: HEAT SHOCK 70 KDA PROTEIN 1L, HEAT SHOCK 70 KDA PROTEIN 1- COMPND 6 HOM, HSP70-HOM; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HSPA1L; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) R3 PRARE; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PNIC-BSA4 KEYWDS HELIX, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, ATP- KEYWDS 2 BINDING, NUCLEOTIDE-BINDING, TRANSCRIPTION, CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR M.WISNIEWSKA,M.MOCHE,C.H.ARROWSMITH,H.BERGLUND,C.BOUNTRA,R.COLLINS, AUTHOR 2 L.G.DAHLGREN,A.M.EDWARDS,S.FLODIN,A.FLORES,S.GRASLUND,M.HAMMARSTROM, AUTHOR 3 A.JOHANSSON,I.JOHANSSON,T.KARLBERG,T.KOTENYOVA,L.LEHTIO,M.E.NILSSON, AUTHOR 4 P.NORDLUND,T.NYMAN,C.PERSSON,J.SAGEMARK,P.SCHUTZ,M.SIPONEN, AUTHOR 5 A.G.THORSELL,L.TRESAUGUES,S.VAN DEN BERG,J.WEIGELT,M.WELIN, AUTHOR 6 H.SCHUELER,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 5 06-SEP-23 3GDQ 1 REMARK SEQADV LINK REVDAT 4 13-JUL-11 3GDQ 1 VERSN REVDAT 3 02-FEB-10 3GDQ 1 JRNL REVDAT 2 07-JUL-09 3GDQ 1 TITLE REVDAT 1 14-APR-09 3GDQ 0 JRNL AUTH M.WISNIEWSKA,T.KARLBERG,L.LEHTIO,I.JOHANSSON,T.KOTENYOVA, JRNL AUTH 2 M.MOCHE,H.SCHULER JRNL TITL CRYSTAL STRUCTURES OF THE ATPASE DOMAINS OF FOUR HUMAN HSP70 JRNL TITL 2 ISOFORMS: HSPA1L/HSP70-HOM, HSPA2/HSP70-2, HSPA6/HSP70B', JRNL TITL 3 AND HSPA5/BIP/GRP78 JRNL REF PLOS ONE V. 5 E8625 2010 JRNL REFN ESSN 1932-6203 JRNL PMID 20072699 JRNL DOI 10.1371/JOURNAL.PONE.0008625 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0035 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.83 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 42856 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2255 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2951 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2060 REMARK 3 BIN FREE R VALUE SET COUNT : 155 REMARK 3 BIN FREE R VALUE : 0.2470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2898 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 39 REMARK 3 SOLVENT ATOMS : 309 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : -0.01000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.104 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.103 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.061 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.898 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.940 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3025 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2044 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4099 ; 1.367 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4979 ; 0.856 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 382 ; 5.085 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 139 ;33.758 ;24.101 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 517 ;12.207 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 23 ;20.295 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 464 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3392 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 617 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1884 ; 0.792 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 777 ; 0.194 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3034 ; 1.472 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1141 ; 2.287 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1065 ; 3.849 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3GDQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-FEB-09. REMARK 100 THE DEPOSITION ID IS D_1000051732. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-08 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45400 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1BA0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 26% PEG MONOMETHYL ETHER 2000, 0.1M REMARK 280 TRIS, 0.2M TRIMETHYLAMINE N-OXIDE, PH 8.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.03500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.75000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.35000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.75000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.03500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.35000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 GLY A -12 REMARK 465 VAL A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 GLY A -8 REMARK 465 THR A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 THR A 3 REMARK 465 ALA A 4 REMARK 465 LYS A 5 REMARK 465 GLY A 190 REMARK 465 GLY A 191 REMARK 465 GLN A 192 REMARK 465 ASP A 385 REMARK 465 LYS A 386 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 189 CG CD CE NZ REMARK 470 LYS A 252 CG CD CE NZ REMARK 470 ARG A 271 NE CZ NH1 NH2 REMARK 470 ASP A 329 OD1 OD2 REMARK 470 LYS A 332 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 64 55.69 -153.74 REMARK 500 TYR A 290 110.82 -161.85 REMARK 500 LYS A 363 13.48 -143.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 390 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PO4 A 387 O2 REMARK 620 2 ADP A 388 O1B 100.9 REMARK 620 3 HOH A 418 O 88.5 88.9 REMARK 620 4 HOH A 447 O 171.6 76.0 99.1 REMARK 620 5 HOH A 448 O 87.9 96.6 173.9 84.7 REMARK 620 6 HOH A 462 O 88.3 168.8 84.8 95.8 90.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 387 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 388 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 389 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 390 DBREF 3GDQ A 1 386 UNP P34931 HS71L_HUMAN 1 386 SEQADV 3GDQ MET A -21 UNP P34931 EXPRESSION TAG SEQADV 3GDQ HIS A -20 UNP P34931 EXPRESSION TAG SEQADV 3GDQ HIS A -19 UNP P34931 EXPRESSION TAG SEQADV 3GDQ HIS A -18 UNP P34931 EXPRESSION TAG SEQADV 3GDQ HIS A -17 UNP P34931 EXPRESSION TAG SEQADV 3GDQ HIS A -16 UNP P34931 EXPRESSION TAG SEQADV 3GDQ HIS A -15 UNP P34931 EXPRESSION TAG SEQADV 3GDQ SER A -14 UNP P34931 EXPRESSION TAG SEQADV 3GDQ SER A -13 UNP P34931 EXPRESSION TAG SEQADV 3GDQ GLY A -12 UNP P34931 EXPRESSION TAG SEQADV 3GDQ VAL A -11 UNP P34931 EXPRESSION TAG SEQADV 3GDQ ASP A -10 UNP P34931 EXPRESSION TAG SEQADV 3GDQ LEU A -9 UNP P34931 EXPRESSION TAG SEQADV 3GDQ GLY A -8 UNP P34931 EXPRESSION TAG SEQADV 3GDQ THR A -7 UNP P34931 EXPRESSION TAG SEQADV 3GDQ GLU A -6 UNP P34931 EXPRESSION TAG SEQADV 3GDQ ASN A -5 UNP P34931 EXPRESSION TAG SEQADV 3GDQ LEU A -4 UNP P34931 EXPRESSION TAG SEQADV 3GDQ TYR A -3 UNP P34931 EXPRESSION TAG SEQADV 3GDQ PHE A -2 UNP P34931 EXPRESSION TAG SEQADV 3GDQ GLN A -1 UNP P34931 EXPRESSION TAG SEQADV 3GDQ SER A 0 UNP P34931 EXPRESSION TAG SEQRES 1 A 408 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 408 GLY THR GLU ASN LEU TYR PHE GLN SER MET ALA THR ALA SEQRES 3 A 408 LYS GLY ILE ALA ILE GLY ILE ASP LEU GLY THR THR TYR SEQRES 4 A 408 SER CYS VAL GLY VAL PHE GLN HIS GLY LYS VAL GLU ILE SEQRES 5 A 408 ILE ALA ASN ASP GLN GLY ASN ARG THR THR PRO SER TYR SEQRES 6 A 408 VAL ALA PHE THR ASP THR GLU ARG LEU ILE GLY ASP ALA SEQRES 7 A 408 ALA LYS ASN GLN VAL ALA MET ASN PRO GLN ASN THR VAL SEQRES 8 A 408 PHE ASP ALA LYS ARG LEU ILE GLY ARG LYS PHE ASN ASP SEQRES 9 A 408 PRO VAL VAL GLN ALA ASP MET LYS LEU TRP PRO PHE GLN SEQRES 10 A 408 VAL ILE ASN GLU GLY GLY LYS PRO LYS VAL LEU VAL SER SEQRES 11 A 408 TYR LYS GLY GLU ASN LYS ALA PHE TYR PRO GLU GLU ILE SEQRES 12 A 408 SER SER MET VAL LEU THR LYS LEU LYS GLU THR ALA GLU SEQRES 13 A 408 ALA PHE LEU GLY HIS PRO VAL THR ASN ALA VAL ILE THR SEQRES 14 A 408 VAL PRO ALA TYR PHE ASN ASP SER GLN ARG GLN ALA THR SEQRES 15 A 408 LYS ASP ALA GLY VAL ILE ALA GLY LEU ASN VAL LEU ARG SEQRES 16 A 408 ILE ILE ASN GLU PRO THR ALA ALA ALA ILE ALA TYR GLY SEQRES 17 A 408 LEU ASP LYS GLY GLY GLN GLY GLU ARG HIS VAL LEU ILE SEQRES 18 A 408 PHE ASP LEU GLY GLY GLY THR PHE ASP VAL SER ILE LEU SEQRES 19 A 408 THR ILE ASP ASP GLY ILE PHE GLU VAL LYS ALA THR ALA SEQRES 20 A 408 GLY ASP THR HIS LEU GLY GLY GLU ASP PHE ASP ASN ARG SEQRES 21 A 408 LEU VAL SER HIS PHE VAL GLU GLU PHE LYS ARG LYS HIS SEQRES 22 A 408 LYS LYS ASP ILE SER GLN ASN LYS ARG ALA VAL ARG ARG SEQRES 23 A 408 LEU ARG THR ALA CYS GLU ARG ALA LYS ARG THR LEU SER SEQRES 24 A 408 SER SER THR GLN ALA ASN LEU GLU ILE ASP SER LEU TYR SEQRES 25 A 408 GLU GLY ILE ASP PHE TYR THR SER ILE THR ARG ALA ARG SEQRES 26 A 408 PHE GLU GLU LEU CYS ALA ASP LEU PHE ARG GLY THR LEU SEQRES 27 A 408 GLU PRO VAL GLU LYS ALA LEU ARG ASP ALA LYS MET ASP SEQRES 28 A 408 LYS ALA LYS ILE HIS ASP ILE VAL LEU VAL GLY GLY SER SEQRES 29 A 408 THR ARG ILE PRO LYS VAL GLN ARG LEU LEU GLN ASP TYR SEQRES 30 A 408 PHE ASN GLY ARG ASP LEU ASN LYS SER ILE ASN PRO ASP SEQRES 31 A 408 GLU ALA VAL ALA TYR GLY ALA ALA VAL GLN ALA ALA ILE SEQRES 32 A 408 LEU MET GLY ASP LYS HET PO4 A 387 5 HET ADP A 388 27 HET GOL A 389 6 HET MN A 390 1 HETNAM PO4 PHOSPHATE ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM GOL GLYCEROL HETNAM MN MANGANESE (II) ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 PO4 O4 P 3- FORMUL 3 ADP C10 H15 N5 O10 P2 FORMUL 4 GOL C3 H8 O3 FORMUL 5 MN MN 2+ FORMUL 6 HOH *309(H2 O) HELIX 1 1 GLY A 54 GLN A 60 1 7 HELIX 2 2 VAL A 61 GLN A 66 5 6 HELIX 3 3 ASP A 71 ILE A 76 1 6 HELIX 4 4 ASP A 82 LYS A 90 1 9 HELIX 5 5 TYR A 117 GLY A 138 1 22 HELIX 6 6 ASN A 153 ALA A 167 1 15 HELIX 7 7 GLU A 177 TYR A 185 1 9 HELIX 8 8 GLY A 231 LYS A 252 1 22 HELIX 9 9 ASP A 254 GLN A 257 5 4 HELIX 10 10 ASN A 258 LEU A 276 1 19 HELIX 11 11 ARG A 301 CYS A 308 1 8 HELIX 12 12 CYS A 308 THR A 315 1 8 HELIX 13 13 THR A 315 ALA A 326 1 12 HELIX 14 14 ASP A 329 ILE A 333 5 5 HELIX 15 15 GLY A 340 ARG A 344 5 5 HELIX 16 16 ILE A 345 PHE A 356 1 12 HELIX 17 17 GLU A 369 GLY A 384 1 16 SHEET 1 A 3 LYS A 27 ILE A 30 0 SHEET 2 A 3 TYR A 17 GLN A 24 -1 N VAL A 22 O GLU A 29 SHEET 3 A 3 THR A 40 PRO A 41 -1 O THR A 40 N SER A 18 SHEET 1 B 5 LYS A 27 ILE A 30 0 SHEET 2 B 5 TYR A 17 GLN A 24 -1 N VAL A 22 O GLU A 29 SHEET 3 B 5 ILE A 9 ASP A 12 -1 N ASP A 12 O CYS A 19 SHEET 4 B 5 ASN A 143 VAL A 148 1 O VAL A 145 N ILE A 11 SHEET 5 B 5 ASN A 170 ASN A 176 1 O LEU A 172 N ALA A 144 SHEET 1 C 3 ARG A 51 ILE A 53 0 SHEET 2 C 3 VAL A 44 PHE A 46 -1 N ALA A 45 O LEU A 52 SHEET 3 C 3 THR A 68 VAL A 69 -1 O VAL A 69 N VAL A 44 SHEET 1 D 3 GLN A 95 GLU A 99 0 SHEET 2 D 3 LYS A 102 TYR A 109 -1 O LYS A 104 N ILE A 97 SHEET 3 D 3 GLU A 112 PHE A 116 -1 O LYS A 114 N VAL A 107 SHEET 1 E 4 ILE A 218 ASP A 227 0 SHEET 2 E 4 PHE A 207 ASP A 215 -1 N VAL A 209 O ALA A 225 SHEET 3 E 4 ARG A 195 LEU A 202 -1 N ILE A 199 O SER A 210 SHEET 4 E 4 ASP A 335 VAL A 339 1 O VAL A 337 N PHE A 200 SHEET 1 F 2 GLN A 281 TYR A 290 0 SHEET 2 F 2 ILE A 293 THR A 300 -1 O THR A 297 N LEU A 284 LINK O2 PO4 A 387 MN MN A 390 1555 1555 2.12 LINK O1B ADP A 388 MN MN A 390 1555 1555 2.12 LINK MN MN A 390 O HOH A 418 1555 1555 2.20 LINK MN MN A 390 O HOH A 447 1555 1555 2.28 LINK MN MN A 390 O HOH A 448 1555 1555 2.20 LINK MN MN A 390 O HOH A 462 1555 1555 2.26 SITE 1 AC1 14 GLY A 14 THR A 15 LYS A 73 PRO A 149 SITE 2 AC1 14 GLU A 177 THR A 206 ADP A 388 MN A 390 SITE 3 AC1 14 HOH A 418 HOH A 427 HOH A 448 HOH A 462 SITE 4 AC1 14 HOH A 499 HOH A 528 SITE 1 AC2 30 THR A 15 THR A 16 TYR A 17 GLY A 203 SITE 2 AC2 30 GLY A 204 GLY A 232 GLU A 270 LYS A 273 SITE 3 AC2 30 ARG A 274 SER A 277 GLY A 340 GLY A 341 SITE 4 AC2 30 SER A 342 ARG A 344 ILE A 345 ASP A 368 SITE 5 AC2 30 PO4 A 387 MN A 390 HOH A 391 HOH A 412 SITE 6 AC2 30 HOH A 418 HOH A 427 HOH A 436 HOH A 447 SITE 7 AC2 30 HOH A 448 HOH A 451 HOH A 459 HOH A 557 SITE 8 AC2 30 HOH A 618 HOH A 681 SITE 1 AC3 10 THR A 15 LYS A 73 ARG A 74 TYR A 151 SITE 2 AC3 10 PHE A 152 GLN A 156 THR A 206 THR A 228 SITE 3 AC3 10 HOH A 445 HOH A 558 SITE 1 AC4 6 PO4 A 387 ADP A 388 HOH A 418 HOH A 447 SITE 2 AC4 6 HOH A 448 HOH A 462 CRYST1 70.070 70.700 97.500 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014271 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014144 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010256 0.00000