data_3GFI # _entry.id 3GFI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3GFI pdb_00003gfi 10.2210/pdb3gfi/pdb NDB PD1251 ? ? RCSB RCSB051794 ? ? WWPDB D_1000051794 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-08-25 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2013-10-09 4 'Structure model' 1 3 2024-03-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _database_PDB_caveat.id 1 _database_PDB_caveat.text ;CHIRALITY ERROR AT C1' CENTER OF DA D 20 ; # _pdbx_database_status.entry_id 3GFI _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2009-02-26 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2eb7 'Native form' unspecified PDB 2yr2 'Crystal belong to different space group' unspecified PDB 3gez 'Native form' unspecified PDB 3gf2 'ST1710-salicylate complex' unspecified PDB 3GFJ R89A unspecified PDB 3GFL R90A unspecified PDB 3GFM K91A unspecified TargetDB Sto001001710.8 . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kumarevel, T.' 1 'Tanaka, T.' 2 'Yokoyama, S.' 3 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 4 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'ST1710-DNA complex crystal structure reveals the DNA binding mechanism of the MarR family of regulators.' 'Nucleic Acids Res.' 37 4723 4735 2009 NARHAD UK 0305-1048 0389 ? 19509310 10.1093/nar/gkp496 1 'Crystal structure of the MarR family regulatory protein, ST1710, from Sulfolobus tokodaii strain 7.' J.Struct.Biol. 161 9 17 2008 JSBIEM US 1047-8477 0803 ? 17933554 10.1016/j.jsb.2007.08.017 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kumarevel, T.' 1 ? primary 'Tanaka, T.' 2 ? primary 'Umehara, T.' 3 ? primary 'Yokoyama, S.' 4 ? 1 'Kumarevel, T.' 5 ? 1 'Tanaka, T.' 6 ? 1 'Nishio, M.' 7 ? 1 'Gopinath, S.C.' 8 ? 1 'Takio, K.' 9 ? 1 'Shinkai, A.' 10 ? 1 'Kumar, P.K.' 11 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '146aa long hypothetical transcriptional regulator' 16879.564 2 ? ? ? ? 2 polymer syn "5'-D(*TP*AP*AP*CP*AP*AP*TP*AP*GP*CP*AP*AP*A)-3'" 3976.652 1 ? ? ? ? 3 polymer syn "5'-D(*TP*TP*GP*CP*TP*AP*TP*TP*GP*T)-3'" 3041.000 1 ? ? ? ? 4 water nat water 18.015 154 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Transcription regulator ST1710' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MLESNENRIQIMSTIAKIYRAMSRELNRRLGELNLSYLDFLVLRATSDGPKTMAYLANRYFVTQSAITASVDKLEEMGLV VRVRDREDRRKILIEITEKGLETFNKGIEIYKKLANEVTGDLSEDEVILVLDKISKILKRIEEISQ ; ;MLESNENRIQIMSTIAKIYRAMSRELNRRLGELNLSYLDFLVLRATSDGPKTMAYLANRYFVTQSAITASVDKLEEMGLV VRVRDREDRRKILIEITEKGLETFNKGIEIYKKLANEVTGDLSEDEVILVLDKISKILKRIEEISQ ; A,C Sto001001710.8 2 polydeoxyribonucleotide no no '(DT)(DA)(DA)(DC)(DA)(DA)(DT)(DA)(DG)(DC)(DA)(DA)(DA)' TAACAATAGCAAA D ? 3 polydeoxyribonucleotide no no '(DT)(DT)(DG)(DC)(DT)(DA)(DT)(DT)(DG)(DT)' TTGCTATTGT E ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LEU n 1 3 GLU n 1 4 SER n 1 5 ASN n 1 6 GLU n 1 7 ASN n 1 8 ARG n 1 9 ILE n 1 10 GLN n 1 11 ILE n 1 12 MET n 1 13 SER n 1 14 THR n 1 15 ILE n 1 16 ALA n 1 17 LYS n 1 18 ILE n 1 19 TYR n 1 20 ARG n 1 21 ALA n 1 22 MET n 1 23 SER n 1 24 ARG n 1 25 GLU n 1 26 LEU n 1 27 ASN n 1 28 ARG n 1 29 ARG n 1 30 LEU n 1 31 GLY n 1 32 GLU n 1 33 LEU n 1 34 ASN n 1 35 LEU n 1 36 SER n 1 37 TYR n 1 38 LEU n 1 39 ASP n 1 40 PHE n 1 41 LEU n 1 42 VAL n 1 43 LEU n 1 44 ARG n 1 45 ALA n 1 46 THR n 1 47 SER n 1 48 ASP n 1 49 GLY n 1 50 PRO n 1 51 LYS n 1 52 THR n 1 53 MET n 1 54 ALA n 1 55 TYR n 1 56 LEU n 1 57 ALA n 1 58 ASN n 1 59 ARG n 1 60 TYR n 1 61 PHE n 1 62 VAL n 1 63 THR n 1 64 GLN n 1 65 SER n 1 66 ALA n 1 67 ILE n 1 68 THR n 1 69 ALA n 1 70 SER n 1 71 VAL n 1 72 ASP n 1 73 LYS n 1 74 LEU n 1 75 GLU n 1 76 GLU n 1 77 MET n 1 78 GLY n 1 79 LEU n 1 80 VAL n 1 81 VAL n 1 82 ARG n 1 83 VAL n 1 84 ARG n 1 85 ASP n 1 86 ARG n 1 87 GLU n 1 88 ASP n 1 89 ARG n 1 90 ARG n 1 91 LYS n 1 92 ILE n 1 93 LEU n 1 94 ILE n 1 95 GLU n 1 96 ILE n 1 97 THR n 1 98 GLU n 1 99 LYS n 1 100 GLY n 1 101 LEU n 1 102 GLU n 1 103 THR n 1 104 PHE n 1 105 ASN n 1 106 LYS n 1 107 GLY n 1 108 ILE n 1 109 GLU n 1 110 ILE n 1 111 TYR n 1 112 LYS n 1 113 LYS n 1 114 LEU n 1 115 ALA n 1 116 ASN n 1 117 GLU n 1 118 VAL n 1 119 THR n 1 120 GLY n 1 121 ASP n 1 122 LEU n 1 123 SER n 1 124 GLU n 1 125 ASP n 1 126 GLU n 1 127 VAL n 1 128 ILE n 1 129 LEU n 1 130 VAL n 1 131 LEU n 1 132 ASP n 1 133 LYS n 1 134 ILE n 1 135 SER n 1 136 LYS n 1 137 ILE n 1 138 LEU n 1 139 LYS n 1 140 ARG n 1 141 ILE n 1 142 GLU n 1 143 GLU n 1 144 ILE n 1 145 SER n 1 146 GLN n 2 1 DT n 2 2 DA n 2 3 DA n 2 4 DC n 2 5 DA n 2 6 DA n 2 7 DT n 2 8 DA n 2 9 DG n 2 10 DC n 2 11 DA n 2 12 DA n 2 13 DA n 3 1 DT n 3 2 DT n 3 3 DG n 3 4 DC n 3 5 DT n 3 6 DA n 3 7 DT n 3 8 DT n 3 9 DG n 3 10 DT n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ST1710 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Sulfolobus tokodaii' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 111955 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL-21 CodonPlus (DE3)-RIL-X' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET21a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 3 ? ? ? A . n A 1 2 LEU 2 4 ? ? ? A . n A 1 3 GLU 3 5 ? ? ? A . n A 1 4 SER 4 6 6 SER ALA A . n A 1 5 ASN 5 7 7 ASN ASN A . n A 1 6 GLU 6 8 8 GLU GLU A . n A 1 7 ASN 7 9 9 ASN ASN A . n A 1 8 ARG 8 10 10 ARG ARG A . n A 1 9 ILE 9 11 11 ILE ILE A . n A 1 10 GLN 10 12 12 GLN GLN A . n A 1 11 ILE 11 13 13 ILE ILE A . n A 1 12 MET 12 14 14 MET MET A . n A 1 13 SER 13 15 15 SER SER A . n A 1 14 THR 14 16 16 THR THR A . n A 1 15 ILE 15 17 17 ILE ILE A . n A 1 16 ALA 16 18 18 ALA ALA A . n A 1 17 LYS 17 19 19 LYS LYS A . n A 1 18 ILE 18 20 20 ILE ILE A . n A 1 19 TYR 19 21 21 TYR TYR A . n A 1 20 ARG 20 22 22 ARG ARG A . n A 1 21 ALA 21 23 23 ALA ALA A . n A 1 22 MET 22 24 24 MET MET A . n A 1 23 SER 23 25 25 SER SER A . n A 1 24 ARG 24 26 26 ARG ARG A . n A 1 25 GLU 25 27 27 GLU GLU A . n A 1 26 LEU 26 28 28 LEU LEU A . n A 1 27 ASN 27 29 29 ASN ASN A . n A 1 28 ARG 28 30 30 ARG ARG A . n A 1 29 ARG 29 31 31 ARG ARG A . n A 1 30 LEU 30 32 32 LEU LEU A . n A 1 31 GLY 31 33 33 GLY GLY A . n A 1 32 GLU 32 34 34 GLU GLU A . n A 1 33 LEU 33 35 35 LEU LEU A . n A 1 34 ASN 34 36 36 ASN ASN A . n A 1 35 LEU 35 37 37 LEU LEU A . n A 1 36 SER 36 38 38 SER SER A . n A 1 37 TYR 37 39 39 TYR TYR A . n A 1 38 LEU 38 40 40 LEU LEU A . n A 1 39 ASP 39 41 41 ASP ASP A . n A 1 40 PHE 40 42 42 PHE PHE A . n A 1 41 LEU 41 43 43 LEU LEU A . n A 1 42 VAL 42 44 44 VAL VAL A . n A 1 43 LEU 43 45 45 LEU LEU A . n A 1 44 ARG 44 46 46 ARG ARG A . n A 1 45 ALA 45 47 47 ALA ALA A . n A 1 46 THR 46 48 48 THR THR A . n A 1 47 SER 47 49 49 SER SER A . n A 1 48 ASP 48 50 50 ASP ASP A . n A 1 49 GLY 49 51 51 GLY GLY A . n A 1 50 PRO 50 52 52 PRO PRO A . n A 1 51 LYS 51 53 53 LYS LYS A . n A 1 52 THR 52 54 54 THR THR A . n A 1 53 MET 53 55 55 MET MET A . n A 1 54 ALA 54 56 56 ALA ALA A . n A 1 55 TYR 55 57 57 TYR TYR A . n A 1 56 LEU 56 58 58 LEU LEU A . n A 1 57 ALA 57 59 59 ALA ALA A . n A 1 58 ASN 58 60 60 ASN ASN A . n A 1 59 ARG 59 61 61 ARG ARG A . n A 1 60 TYR 60 62 62 TYR TYR A . n A 1 61 PHE 61 63 63 PHE PHE A . n A 1 62 VAL 62 64 64 VAL VAL A . n A 1 63 THR 63 65 65 THR THR A . n A 1 64 GLN 64 66 66 GLN GLN A . n A 1 65 SER 65 67 67 SER SER A . n A 1 66 ALA 66 68 68 ALA ALA A . n A 1 67 ILE 67 69 69 ILE ILE A . n A 1 68 THR 68 70 70 THR THR A . n A 1 69 ALA 69 71 71 ALA ALA A . n A 1 70 SER 70 72 72 SER SER A . n A 1 71 VAL 71 73 73 VAL VAL A . n A 1 72 ASP 72 74 74 ASP ASP A . n A 1 73 LYS 73 75 75 LYS LYS A . n A 1 74 LEU 74 76 76 LEU LEU A . n A 1 75 GLU 75 77 77 GLU GLU A . n A 1 76 GLU 76 78 78 GLU GLU A . n A 1 77 MET 77 79 79 MET MET A . n A 1 78 GLY 78 80 80 GLY GLY A . n A 1 79 LEU 79 81 81 LEU LEU A . n A 1 80 VAL 80 82 82 VAL VAL A . n A 1 81 VAL 81 83 83 VAL VAL A . n A 1 82 ARG 82 84 84 ARG ARG A . n A 1 83 VAL 83 85 85 VAL VAL A . n A 1 84 ARG 84 86 86 ARG ARG A . n A 1 85 ASP 85 87 87 ASP ASP A . n A 1 86 ARG 86 88 88 ARG ARG A . n A 1 87 GLU 87 89 89 GLU GLU A . n A 1 88 ASP 88 90 90 ASP ASP A . n A 1 89 ARG 89 91 91 ARG ARG A . n A 1 90 ARG 90 92 92 ARG ARG A . n A 1 91 LYS 91 93 93 LYS LYS A . n A 1 92 ILE 92 94 94 ILE ILE A . n A 1 93 LEU 93 95 95 LEU LEU A . n A 1 94 ILE 94 96 96 ILE ILE A . n A 1 95 GLU 95 97 97 GLU GLU A . n A 1 96 ILE 96 98 98 ILE ILE A . n A 1 97 THR 97 99 99 THR THR A . n A 1 98 GLU 98 100 100 GLU GLU A . n A 1 99 LYS 99 101 101 LYS LYS A . n A 1 100 GLY 100 102 102 GLY GLY A . n A 1 101 LEU 101 103 103 LEU LEU A . n A 1 102 GLU 102 104 104 GLU GLU A . n A 1 103 THR 103 105 105 THR THR A . n A 1 104 PHE 104 106 106 PHE PHE A . n A 1 105 ASN 105 107 107 ASN ASN A . n A 1 106 LYS 106 108 108 LYS LYS A . n A 1 107 GLY 107 109 109 GLY GLY A . n A 1 108 ILE 108 110 110 ILE ILE A . n A 1 109 GLU 109 111 111 GLU GLU A . n A 1 110 ILE 110 112 112 ILE ILE A . n A 1 111 TYR 111 113 113 TYR TYR A . n A 1 112 LYS 112 114 114 LYS LYS A . n A 1 113 LYS 113 115 115 LYS LYS A . n A 1 114 LEU 114 116 116 LEU LEU A . n A 1 115 ALA 115 117 117 ALA ALA A . n A 1 116 ASN 116 118 118 ASN ASN A . n A 1 117 GLU 117 119 119 GLU GLU A . n A 1 118 VAL 118 120 120 VAL VAL A . n A 1 119 THR 119 121 121 THR THR A . n A 1 120 GLY 120 122 122 GLY GLY A . n A 1 121 ASP 121 123 123 ASP ASP A . n A 1 122 LEU 122 124 124 LEU LEU A . n A 1 123 SER 123 125 125 SER SER A . n A 1 124 GLU 124 126 126 GLU GLU A . n A 1 125 ASP 125 127 127 ASP ASP A . n A 1 126 GLU 126 128 128 GLU GLU A . n A 1 127 VAL 127 129 129 VAL VAL A . n A 1 128 ILE 128 130 130 ILE ILE A . n A 1 129 LEU 129 131 131 LEU LEU A . n A 1 130 VAL 130 132 132 VAL VAL A . n A 1 131 LEU 131 133 133 LEU LEU A . n A 1 132 ASP 132 134 134 ASP ASP A . n A 1 133 LYS 133 135 135 LYS LYS A . n A 1 134 ILE 134 136 136 ILE ILE A . n A 1 135 SER 135 137 137 SER SER A . n A 1 136 LYS 136 138 138 LYS LYS A . n A 1 137 ILE 137 139 139 ILE ILE A . n A 1 138 LEU 138 140 140 LEU LEU A . n A 1 139 LYS 139 141 141 LYS LYS A . n A 1 140 ARG 140 142 142 ARG ARG A . n A 1 141 ILE 141 143 143 ILE ILE A . n A 1 142 GLU 142 144 144 GLU GLU A . n A 1 143 GLU 143 145 145 GLU GLU A . n A 1 144 ILE 144 146 146 ILE ILE A . n A 1 145 SER 145 147 147 SER SER A . n A 1 146 GLN 146 148 148 GLN GLN A . n B 1 1 MET 1 3 ? ? ? C . n B 1 2 LEU 2 4 ? ? ? C . n B 1 3 GLU 3 5 ? ? ? C . n B 1 4 SER 4 6 ? ? ? C . n B 1 5 ASN 5 7 7 ASN ASN C . n B 1 6 GLU 6 8 8 GLU GLU C . n B 1 7 ASN 7 9 9 ASN ASN C . n B 1 8 ARG 8 10 10 ARG ARG C . n B 1 9 ILE 9 11 11 ILE ILE C . n B 1 10 GLN 10 12 12 GLN GLN C . n B 1 11 ILE 11 13 13 ILE ILE C . n B 1 12 MET 12 14 14 MET MET C . n B 1 13 SER 13 15 15 SER SER C . n B 1 14 THR 14 16 16 THR THR C . n B 1 15 ILE 15 17 17 ILE ILE C . n B 1 16 ALA 16 18 18 ALA ALA C . n B 1 17 LYS 17 19 19 LYS LYS C . n B 1 18 ILE 18 20 20 ILE ILE C . n B 1 19 TYR 19 21 21 TYR TYR C . n B 1 20 ARG 20 22 22 ARG ARG C . n B 1 21 ALA 21 23 23 ALA ALA C . n B 1 22 MET 22 24 24 MET MET C . n B 1 23 SER 23 25 25 SER SER C . n B 1 24 ARG 24 26 26 ARG ARG C . n B 1 25 GLU 25 27 27 GLU GLU C . n B 1 26 LEU 26 28 28 LEU LEU C . n B 1 27 ASN 27 29 29 ASN ASN C . n B 1 28 ARG 28 30 30 ARG ARG C . n B 1 29 ARG 29 31 31 ARG ARG C . n B 1 30 LEU 30 32 32 LEU LEU C . n B 1 31 GLY 31 33 33 GLY GLY C . n B 1 32 GLU 32 34 34 GLU GLU C . n B 1 33 LEU 33 35 35 LEU LEU C . n B 1 34 ASN 34 36 36 ASN ASN C . n B 1 35 LEU 35 37 37 LEU LEU C . n B 1 36 SER 36 38 38 SER SER C . n B 1 37 TYR 37 39 39 TYR TYR C . n B 1 38 LEU 38 40 40 LEU LEU C . n B 1 39 ASP 39 41 41 ASP ASP C . n B 1 40 PHE 40 42 42 PHE PHE C . n B 1 41 LEU 41 43 43 LEU LEU C . n B 1 42 VAL 42 44 44 VAL VAL C . n B 1 43 LEU 43 45 45 LEU LEU C . n B 1 44 ARG 44 46 46 ARG ARG C . n B 1 45 ALA 45 47 47 ALA ALA C . n B 1 46 THR 46 48 48 THR THR C . n B 1 47 SER 47 49 49 SER SER C . n B 1 48 ASP 48 50 50 ASP ASP C . n B 1 49 GLY 49 51 51 GLY GLY C . n B 1 50 PRO 50 52 52 PRO PRO C . n B 1 51 LYS 51 53 53 LYS LYS C . n B 1 52 THR 52 54 54 THR THR C . n B 1 53 MET 53 55 55 MET MET C . n B 1 54 ALA 54 56 56 ALA ALA C . n B 1 55 TYR 55 57 57 TYR TYR C . n B 1 56 LEU 56 58 58 LEU LEU C . n B 1 57 ALA 57 59 59 ALA ALA C . n B 1 58 ASN 58 60 60 ASN ASN C . n B 1 59 ARG 59 61 61 ARG ARG C . n B 1 60 TYR 60 62 62 TYR TYR C . n B 1 61 PHE 61 63 63 PHE PHE C . n B 1 62 VAL 62 64 64 VAL VAL C . n B 1 63 THR 63 65 65 THR THR C . n B 1 64 GLN 64 66 66 GLN GLN C . n B 1 65 SER 65 67 67 SER SER C . n B 1 66 ALA 66 68 68 ALA ALA C . n B 1 67 ILE 67 69 69 ILE ILE C . n B 1 68 THR 68 70 70 THR THR C . n B 1 69 ALA 69 71 71 ALA ALA C . n B 1 70 SER 70 72 72 SER SER C . n B 1 71 VAL 71 73 73 VAL VAL C . n B 1 72 ASP 72 74 74 ASP ASP C . n B 1 73 LYS 73 75 75 LYS LYS C . n B 1 74 LEU 74 76 76 LEU LEU C . n B 1 75 GLU 75 77 77 GLU GLU C . n B 1 76 GLU 76 78 78 GLU GLU C . n B 1 77 MET 77 79 79 MET MET C . n B 1 78 GLY 78 80 80 GLY GLY C . n B 1 79 LEU 79 81 81 LEU LEU C . n B 1 80 VAL 80 82 82 VAL VAL C . n B 1 81 VAL 81 83 83 VAL VAL C . n B 1 82 ARG 82 84 84 ARG ARG C . n B 1 83 VAL 83 85 85 VAL VAL C . n B 1 84 ARG 84 86 86 ARG ARG C . n B 1 85 ASP 85 87 87 ASP ASP C . n B 1 86 ARG 86 88 88 ARG ARG C . n B 1 87 GLU 87 89 89 GLU GLU C . n B 1 88 ASP 88 90 90 ASP ASP C . n B 1 89 ARG 89 91 91 ARG ARG C . n B 1 90 ARG 90 92 92 ARG ARG C . n B 1 91 LYS 91 93 93 LYS LYS C . n B 1 92 ILE 92 94 94 ILE ILE C . n B 1 93 LEU 93 95 95 LEU LEU C . n B 1 94 ILE 94 96 96 ILE ILE C . n B 1 95 GLU 95 97 97 GLU GLU C . n B 1 96 ILE 96 98 98 ILE ILE C . n B 1 97 THR 97 99 99 THR THR C . n B 1 98 GLU 98 100 100 GLU GLU C . n B 1 99 LYS 99 101 101 LYS LYS C . n B 1 100 GLY 100 102 102 GLY GLY C . n B 1 101 LEU 101 103 103 LEU LEU C . n B 1 102 GLU 102 104 104 GLU GLU C . n B 1 103 THR 103 105 105 THR THR C . n B 1 104 PHE 104 106 106 PHE PHE C . n B 1 105 ASN 105 107 107 ASN ASN C . n B 1 106 LYS 106 108 108 LYS LYS C . n B 1 107 GLY 107 109 109 GLY GLY C . n B 1 108 ILE 108 110 110 ILE ILE C . n B 1 109 GLU 109 111 111 GLU GLU C . n B 1 110 ILE 110 112 112 ILE ILE C . n B 1 111 TYR 111 113 113 TYR TYR C . n B 1 112 LYS 112 114 114 LYS LYS C . n B 1 113 LYS 113 115 115 LYS LYS C . n B 1 114 LEU 114 116 116 LEU LEU C . n B 1 115 ALA 115 117 117 ALA ALA C . n B 1 116 ASN 116 118 118 ASN ASN C . n B 1 117 GLU 117 119 119 GLU GLU C . n B 1 118 VAL 118 120 120 VAL VAL C . n B 1 119 THR 119 121 121 THR THR C . n B 1 120 GLY 120 122 122 GLY GLY C . n B 1 121 ASP 121 123 123 ASP ASP C . n B 1 122 LEU 122 124 124 LEU LEU C . n B 1 123 SER 123 125 125 SER SER C . n B 1 124 GLU 124 126 126 GLU GLU C . n B 1 125 ASP 125 127 127 ASP ASP C . n B 1 126 GLU 126 128 128 GLU GLU C . n B 1 127 VAL 127 129 129 VAL VAL C . n B 1 128 ILE 128 130 130 ILE ILE C . n B 1 129 LEU 129 131 131 LEU LEU C . n B 1 130 VAL 130 132 132 VAL VAL C . n B 1 131 LEU 131 133 133 LEU LEU C . n B 1 132 ASP 132 134 134 ASP ASP C . n B 1 133 LYS 133 135 135 LYS LYS C . n B 1 134 ILE 134 136 136 ILE ILE C . n B 1 135 SER 135 137 137 SER SER C . n B 1 136 LYS 136 138 138 LYS LYS C . n B 1 137 ILE 137 139 139 ILE ILE C . n B 1 138 LEU 138 140 140 LEU LEU C . n B 1 139 LYS 139 141 141 LYS LYS C . n B 1 140 ARG 140 142 142 ARG ARG C . n B 1 141 ILE 141 143 143 ILE ILE C . n B 1 142 GLU 142 144 144 GLU GLU C . n B 1 143 GLU 143 145 145 GLU GLU C . n B 1 144 ILE 144 146 146 ILE ILE C . n B 1 145 SER 145 147 147 SER SER C . n B 1 146 GLN 146 148 148 GLN GLN C . n C 2 1 DT 1 8 8 DT DT D . n C 2 2 DA 2 9 9 DA DA D . n C 2 3 DA 3 10 10 DA DA D . n C 2 4 DC 4 11 11 DC DC D . n C 2 5 DA 5 12 12 DA DA D . n C 2 6 DA 6 13 13 DA DA D . n C 2 7 DT 7 14 14 DT DT D . n C 2 8 DA 8 15 15 DA DA D . n C 2 9 DG 9 16 16 DG DG D . n C 2 10 DC 10 17 17 DC DC D . n C 2 11 DA 11 18 18 DA DA D . n C 2 12 DA 12 19 19 DA DA D . n C 2 13 DA 13 20 20 DA DA D . n D 3 1 DT 1 4 4 DT DT E . n D 3 2 DT 2 5 5 DT DT E . n D 3 3 DG 3 6 6 DG DG E . n D 3 4 DC 4 7 7 DC DC E . n D 3 5 DT 5 8 8 DT DT E . n D 3 6 DA 6 9 9 DA DA E . n D 3 7 DT 7 10 10 DT DT E . n D 3 8 DT 8 11 11 DT DT E . n D 3 9 DG 9 12 12 DG DG E . n D 3 10 DT 10 13 13 DT DT E . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 HOH 1 2 2 HOH HOH A . E 4 HOH 2 149 3 HOH HOH A . E 4 HOH 3 150 4 HOH HOH A . E 4 HOH 4 151 5 HOH HOH A . E 4 HOH 5 152 7 HOH HOH A . E 4 HOH 6 153 153 HOH HOH A . E 4 HOH 7 154 9 HOH HOH A . E 4 HOH 8 155 10 HOH HOH A . E 4 HOH 9 156 18 HOH HOH A . E 4 HOH 10 157 20 HOH HOH A . E 4 HOH 11 158 21 HOH HOH A . E 4 HOH 12 159 22 HOH HOH A . E 4 HOH 13 160 23 HOH HOH A . E 4 HOH 14 161 152 HOH HOH A . E 4 HOH 15 162 28 HOH HOH A . E 4 HOH 16 163 32 HOH HOH A . E 4 HOH 17 164 34 HOH HOH A . E 4 HOH 18 165 35 HOH HOH A . E 4 HOH 19 166 38 HOH HOH A . E 4 HOH 20 167 39 HOH HOH A . E 4 HOH 21 168 40 HOH HOH A . E 4 HOH 22 169 41 HOH HOH A . E 4 HOH 23 170 42 HOH HOH A . E 4 HOH 24 171 45 HOH HOH A . E 4 HOH 25 172 46 HOH HOH A . E 4 HOH 26 173 47 HOH HOH A . E 4 HOH 27 174 50 HOH HOH A . E 4 HOH 28 175 51 HOH HOH A . E 4 HOH 29 176 53 HOH HOH A . E 4 HOH 30 177 57 HOH HOH A . E 4 HOH 31 178 58 HOH HOH A . E 4 HOH 32 179 59 HOH HOH A . E 4 HOH 33 180 60 HOH HOH A . E 4 HOH 34 181 61 HOH HOH A . E 4 HOH 35 182 62 HOH HOH A . E 4 HOH 36 183 70 HOH HOH A . E 4 HOH 37 184 71 HOH HOH A . E 4 HOH 38 185 81 HOH HOH A . E 4 HOH 39 186 83 HOH HOH A . E 4 HOH 40 187 86 HOH HOH A . E 4 HOH 41 188 87 HOH HOH A . E 4 HOH 42 189 95 HOH HOH A . E 4 HOH 43 190 98 HOH HOH A . E 4 HOH 44 191 99 HOH HOH A . E 4 HOH 45 192 100 HOH HOH A . E 4 HOH 46 193 101 HOH HOH A . E 4 HOH 47 194 103 HOH HOH A . E 4 HOH 48 195 109 HOH HOH A . E 4 HOH 49 196 115 HOH HOH A . E 4 HOH 50 197 116 HOH HOH A . E 4 HOH 51 198 121 HOH HOH A . E 4 HOH 52 199 123 HOH HOH A . E 4 HOH 53 200 124 HOH HOH A . E 4 HOH 54 201 128 HOH HOH A . E 4 HOH 55 202 129 HOH HOH A . E 4 HOH 56 203 132 HOH HOH A . E 4 HOH 57 204 133 HOH HOH A . E 4 HOH 58 205 136 HOH HOH A . E 4 HOH 59 206 141 HOH HOH A . E 4 HOH 60 207 142 HOH HOH A . E 4 HOH 61 208 145 HOH HOH A . E 4 HOH 62 209 90 HOH HOH A . E 4 HOH 63 210 105 HOH HOH A . E 4 HOH 64 211 131 HOH HOH A . E 4 HOH 65 217 137 HOH HOH A . E 4 HOH 66 222 144 HOH HOH A . F 4 HOH 1 1 1 HOH HOH C . F 4 HOH 2 149 149 HOH HOH C . F 4 HOH 3 150 150 HOH HOH C . F 4 HOH 4 151 151 HOH HOH C . F 4 HOH 5 153 6 HOH HOH C . F 4 HOH 6 154 154 HOH HOH C . F 4 HOH 7 155 155 HOH HOH C . F 4 HOH 8 156 8 HOH HOH C . F 4 HOH 9 157 11 HOH HOH C . F 4 HOH 10 158 12 HOH HOH C . F 4 HOH 11 159 13 HOH HOH C . F 4 HOH 12 160 14 HOH HOH C . F 4 HOH 13 161 24 HOH HOH C . F 4 HOH 14 162 16 HOH HOH C . F 4 HOH 15 163 17 HOH HOH C . F 4 HOH 16 164 19 HOH HOH C . F 4 HOH 17 165 25 HOH HOH C . F 4 HOH 18 166 26 HOH HOH C . F 4 HOH 19 167 27 HOH HOH C . F 4 HOH 20 168 29 HOH HOH C . F 4 HOH 21 169 30 HOH HOH C . F 4 HOH 22 170 31 HOH HOH C . F 4 HOH 23 171 33 HOH HOH C . F 4 HOH 24 172 36 HOH HOH C . F 4 HOH 25 173 37 HOH HOH C . F 4 HOH 26 174 43 HOH HOH C . F 4 HOH 27 175 44 HOH HOH C . F 4 HOH 28 176 48 HOH HOH C . F 4 HOH 29 177 54 HOH HOH C . F 4 HOH 30 178 55 HOH HOH C . F 4 HOH 31 179 63 HOH HOH C . F 4 HOH 32 180 64 HOH HOH C . F 4 HOH 33 181 65 HOH HOH C . F 4 HOH 34 182 66 HOH HOH C . F 4 HOH 35 183 67 HOH HOH C . F 4 HOH 36 184 68 HOH HOH C . F 4 HOH 37 185 69 HOH HOH C . F 4 HOH 38 186 72 HOH HOH C . F 4 HOH 39 187 73 HOH HOH C . F 4 HOH 40 188 74 HOH HOH C . F 4 HOH 41 189 75 HOH HOH C . F 4 HOH 42 190 76 HOH HOH C . F 4 HOH 43 191 77 HOH HOH C . F 4 HOH 44 192 88 HOH HOH C . F 4 HOH 45 193 15 HOH HOH C . F 4 HOH 46 194 91 HOH HOH C . F 4 HOH 47 195 92 HOH HOH C . F 4 HOH 48 196 93 HOH HOH C . F 4 HOH 49 197 97 HOH HOH C . F 4 HOH 50 198 104 HOH HOH C . F 4 HOH 51 199 102 HOH HOH C . F 4 HOH 52 200 106 HOH HOH C . F 4 HOH 53 201 107 HOH HOH C . F 4 HOH 54 202 110 HOH HOH C . F 4 HOH 55 203 111 HOH HOH C . F 4 HOH 56 204 112 HOH HOH C . F 4 HOH 57 205 113 HOH HOH C . F 4 HOH 58 206 114 HOH HOH C . F 4 HOH 59 207 117 HOH HOH C . F 4 HOH 60 208 118 HOH HOH C . F 4 HOH 61 209 119 HOH HOH C . F 4 HOH 62 210 120 HOH HOH C . F 4 HOH 63 211 122 HOH HOH C . F 4 HOH 64 212 125 HOH HOH C . F 4 HOH 65 213 126 HOH HOH C . F 4 HOH 66 215 134 HOH HOH C . F 4 HOH 67 216 135 HOH HOH C . F 4 HOH 68 218 138 HOH HOH C . F 4 HOH 69 219 139 HOH HOH C . F 4 HOH 70 220 140 HOH HOH C . F 4 HOH 71 221 143 HOH HOH C . F 4 HOH 72 223 146 HOH HOH C . F 4 HOH 73 224 147 HOH HOH C . F 4 HOH 74 225 148 HOH HOH C . G 4 HOH 1 49 49 HOH HOH D . G 4 HOH 2 52 52 HOH HOH D . G 4 HOH 3 56 56 HOH HOH D . G 4 HOH 4 79 79 HOH HOH D . G 4 HOH 5 80 80 HOH HOH D . G 4 HOH 6 82 82 HOH HOH D . G 4 HOH 7 84 84 HOH HOH D . G 4 HOH 8 96 96 HOH HOH D . G 4 HOH 9 108 108 HOH HOH D . G 4 HOH 10 127 127 HOH HOH D . H 4 HOH 1 78 78 HOH HOH E . H 4 HOH 2 85 85 HOH HOH E . H 4 HOH 3 94 94 HOH HOH E . H 4 HOH 4 214 130 HOH HOH E . # _pdbx_unobs_or_zero_occ_atoms.id 1 _pdbx_unobs_or_zero_occ_atoms.PDB_model_num 1 _pdbx_unobs_or_zero_occ_atoms.polymer_flag Y _pdbx_unobs_or_zero_occ_atoms.occupancy_flag 1 _pdbx_unobs_or_zero_occ_atoms.auth_asym_id A _pdbx_unobs_or_zero_occ_atoms.auth_comp_id SER _pdbx_unobs_or_zero_occ_atoms.auth_seq_id 6 _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code ? _pdbx_unobs_or_zero_occ_atoms.auth_atom_id OG _pdbx_unobs_or_zero_occ_atoms.label_alt_id ? _pdbx_unobs_or_zero_occ_atoms.label_asym_id A _pdbx_unobs_or_zero_occ_atoms.label_comp_id SER _pdbx_unobs_or_zero_occ_atoms.label_seq_id 4 _pdbx_unobs_or_zero_occ_atoms.label_atom_id OG # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal CNS 1.1 ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns-online.org/ Fortran_77 ? 1 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 2 CrystalClear . ? ? ? ? 'data collection' ? ? ? 3 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 4 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 5 SOLVE . ? ? ? ? phasing ? ? ? 6 # _cell.entry_id 3GFI _cell.length_a 94.440 _cell.length_b 106.730 _cell.length_c 82.260 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3GFI _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3GFI _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.54 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 51.61 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 3.8 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;30% 2-methyl-2,4-pentanediol (MPD) 0.02M Calcium chloride dehydrate, 0.1M sodium trihydrate, pH 3.8, VAPOR DIFFUSION, SITTING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 MPD ? ? ? 1 2 1 'Calcium chloride dehydrate' ? ? ? 1 3 1 'sodium trihydrate' ? ? ? 1 4 2 MPD ? ? ? 1 5 2 'Calcium chloride dehydrate' ? ? ? 1 6 2 'sodium trihydrate' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 180 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU JUPITER 210' _diffrn_detector.pdbx_collection_date 2008-11-27 _diffrn_detector.details 'A fixed exit Si double crystal monochromator followed by a two dimensional focusing mirror which is coated in rhodium' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.monochromator 'Fixed exit Si double crystal monochromator, Si (111)' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97896 1.0 2 0.97930 1.0 3 1.000 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL26B1' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.97896, 0.97930, 1.000' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL26B1 # _reflns.entry_id 3GFI _reflns.B_iso_Wilson_estimate 30.300 _reflns.observed_criterion_sigma_F 2.0 _reflns.observed_criterion_sigma_I 2.0 _reflns.d_resolution_high 2.1 _reflns.d_resolution_low 40.0 _reflns.number_all 24231 _reflns.number_obs 24231 _reflns.percent_possible_obs 99.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.067 _reflns.pdbx_netI_over_sigmaI ? _reflns.pdbx_redundancy 9.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.18 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 98.6 _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value 0.281 _reflns_shell.pdbx_redundancy 9.8 _reflns_shell.number_unique_all 2372 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3GFI _refine.ls_number_reflns_obs 24202 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 2021016.20 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.75 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs 98.8 _refine.ls_R_factor_obs 0.234 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.234 _refine.ls_R_factor_R_free 0.280 _refine.ls_R_factor_R_free_error 0.007 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 7.1 _refine.ls_number_reflns_R_free 1726 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_max 1.00 _refine.occupancy_min 1.00 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_max 100.15 _refine.B_iso_min 18.15 _refine.B_iso_mean 51.1 _refine.aniso_B[1][1] -4.80 _refine.aniso_B[2][2] -1.71 _refine.aniso_B[3][3] 6.51 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.360857 _refine.solvent_model_param_bsol 54.2158 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_obs 0.27 _refine_analyze.Luzzati_sigma_a_obs 0.12 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.33 _refine_analyze.Luzzati_sigma_a_free 0.16 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.entry_id 3GFI # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2305 _refine_hist.pdbx_number_atoms_nucleic_acid 466 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 154 _refine_hist.number_atoms_total 2925 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 19.75 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.1 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 18.3 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.84 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.56 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.44 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.25 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.37 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.10 _refine_ls_shell.d_res_low 2.23 _refine_ls_shell.number_reflns_R_work 3577 _refine_ls_shell.R_factor_R_work 0.242 _refine_ls_shell.percent_reflns_obs 94.9 _refine_ls_shell.R_factor_R_free 0.279 _refine_ls_shell.R_factor_R_free_error 0.017 _refine_ls_shell.percent_reflns_R_free 6.8 _refine_ls_shell.number_reflns_R_free 262 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 water_rep.param water.top 'X-RAY DIFFRACTION' 3 dna-rna_rep.param dna-rna_rep.top 'X-RAY DIFFRACTION' 4 ion.param ion.top 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3GFI _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _struct.entry_id 3GFI _struct.title 'Crystal structure of ST1710 complexed with its promoter DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3GFI _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text ;Transcription regulator, ST1710, MarR, DNA-binding, Transcription, Transcription regulation, TRANSCRIPTION-DNA COMPLEX, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q96ZY1_SULTO Q96ZY1 1 ;MLESNENRIQIMSTIAKIYRAMSRELNRRLGELNLSYLDFLVLRATSDGPKTMAYLANRYFVTQSAITASVDKLEEMGLV VRVRDREDRRKILIEITEKGLETFNKGIEIYKKLANEVTGDLSEDEVILVLDKISKILKRIEEISQ ; 1 ? 2 PDB 3GFI 3GFI 2 ? ? ? 3 PDB 3GFI 3GFI 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3GFI A 1 ? 146 ? Q96ZY1 1 ? 146 ? 3 148 2 1 3GFI C 1 ? 146 ? Q96ZY1 1 ? 146 ? 3 148 3 2 3GFI D 1 ? 13 ? 3GFI 8 ? 20 ? 8 20 4 3 3GFI E 1 ? 10 ? 3GFI 4 ? 13 ? 4 13 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 5 ? GLY A 31 ? ASN A 7 GLY A 33 1 ? 27 HELX_P HELX_P2 2 GLU A 32 ? ASN A 34 ? GLU A 34 ASN A 36 5 ? 3 HELX_P HELX_P3 3 SER A 36 ? SER A 47 ? SER A 38 SER A 49 1 ? 12 HELX_P HELX_P4 4 MET A 53 ? TYR A 60 ? MET A 55 TYR A 62 1 ? 8 HELX_P HELX_P5 5 THR A 63 ? MET A 77 ? THR A 65 MET A 79 1 ? 15 HELX_P HELX_P6 6 THR A 97 ? THR A 119 ? THR A 99 THR A 121 1 ? 23 HELX_P HELX_P7 7 SER A 123 ? GLN A 146 ? SER A 125 GLN A 148 1 ? 24 HELX_P HELX_P8 8 ASN B 5 ? GLY B 31 ? ASN C 7 GLY C 33 1 ? 27 HELX_P HELX_P9 9 GLU B 32 ? ASN B 34 ? GLU C 34 ASN C 36 5 ? 3 HELX_P HELX_P10 10 SER B 36 ? SER B 47 ? SER C 38 SER C 49 1 ? 12 HELX_P HELX_P11 11 THR B 52 ? TYR B 60 ? THR C 54 TYR C 62 1 ? 9 HELX_P HELX_P12 12 THR B 63 ? MET B 77 ? THR C 65 MET C 79 1 ? 15 HELX_P HELX_P13 13 THR B 97 ? THR B 119 ? THR C 99 THR C 121 1 ? 23 HELX_P HELX_P14 14 SER B 123 ? GLN B 146 ? SER C 125 GLN C 148 1 ? 24 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? C DA 3 N1 ? ? ? 1_555 D DT 10 N3 ? ? D DA 10 E DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DA 3 N6 ? ? ? 1_555 D DT 10 O4 ? ? D DA 10 E DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DC 4 N3 ? ? ? 1_555 D DG 9 N1 ? ? D DC 11 E DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DC 4 N4 ? ? ? 1_555 D DG 9 O6 ? ? D DC 11 E DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DC 4 O2 ? ? ? 1_555 D DG 9 N2 ? ? D DC 11 E DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DA 5 N1 ? ? ? 1_555 D DT 8 N3 ? ? D DA 12 E DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DT 8 O4 ? ? D DA 12 E DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DA 6 N1 ? ? ? 1_555 D DT 7 N3 ? ? D DA 13 E DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DA 6 N6 ? ? ? 1_555 D DT 7 O4 ? ? D DA 13 E DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DT 7 N3 ? ? ? 1_555 D DA 6 N1 ? ? D DT 14 E DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DT 7 O4 ? ? ? 1_555 D DA 6 N6 ? ? D DT 14 E DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DA 8 N1 ? ? ? 1_555 D DT 5 N3 ? ? D DA 15 E DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DA 8 N6 ? ? ? 1_555 D DT 5 O4 ? ? D DA 15 E DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DG 9 N1 ? ? ? 1_555 D DC 4 N3 ? ? D DG 16 E DC 7 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog15 hydrog ? ? C DC 10 N3 ? ? ? 1_555 D DG 3 N1 ? ? D DC 17 E DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DC 10 N4 ? ? ? 1_555 D DG 3 O6 ? ? D DC 17 E DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DC 10 O2 ? ? ? 1_555 D DG 3 N2 ? ? D DC 17 E DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DA 11 N1 ? ? ? 1_555 D DT 2 N3 ? ? D DA 18 E DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DA 11 N6 ? ? ? 1_555 D DT 2 O4 ? ? D DA 18 E DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DA 12 N1 ? ? ? 1_555 D DT 1 N3 ? ? D DA 19 E DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DA 12 N6 ? ? ? 1_555 D DT 1 O4 ? ? D DA 19 E DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DT 1 N3 ? ? ? 1_555 C DA 2 N1 ? ? D DT 8 D DA 9 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DT 1 O4 ? ? ? 1_555 C DA 2 N6 ? ? D DT 8 D DA 9 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DA 2 N1 ? ? ? 1_555 C DT 1 N3 ? ? D DA 9 D DT 8 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DA 2 N6 ? ? ? 1_555 C DT 1 O4 ? ? D DA 9 D DT 8 4_565 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 51 ? THR A 52 ? LYS A 53 THR A 54 A 2 ASP A 88 ? ILE A 96 ? ASP A 90 ILE A 98 A 3 VAL A 80 ? ASP A 85 ? VAL A 82 ASP A 87 B 1 VAL B 80 ? ARG B 84 ? VAL C 82 ARG C 86 B 2 ILE B 92 ? ILE B 96 ? ILE C 94 ILE C 98 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 51 ? N LYS A 53 O ILE A 94 ? O ILE A 96 A 2 3 O LEU A 93 ? O LEU A 95 N VAL A 83 ? N VAL A 85 B 1 2 N VAL B 81 ? N VAL C 83 O GLU B 95 ? O GLU C 97 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N9 D DA 20 ? ? "C1'" D DA 20 ? ? "C2'" D DA 20 ? ? 125.81 114.30 11.51 1.40 N 2 1 "O4'" D DA 20 ? ? "C1'" D DA 20 ? ? N9 D DA 20 ? ? 111.36 108.30 3.06 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 90 ? ? -162.19 89.58 2 1 ARG A 91 ? ? -59.83 2.54 3 1 ARG C 91 ? ? -62.23 3.92 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id "C1'" _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id D _pdbx_validate_chiral.auth_comp_id DA _pdbx_validate_chiral.auth_seq_id 20 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 3 ? A MET 1 2 1 Y 1 A LEU 4 ? A LEU 2 3 1 Y 1 A GLU 5 ? A GLU 3 4 1 Y 1 C MET 3 ? B MET 1 5 1 Y 1 C LEU 4 ? B LEU 2 6 1 Y 1 C GLU 5 ? B GLU 3 7 1 Y 1 C SER 6 ? B SER 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 HOH O O N N 266 HOH H1 H N N 267 HOH H2 H N N 268 ILE N N N N 269 ILE CA C N S 270 ILE C C N N 271 ILE O O N N 272 ILE CB C N S 273 ILE CG1 C N N 274 ILE CG2 C N N 275 ILE CD1 C N N 276 ILE OXT O N N 277 ILE H H N N 278 ILE H2 H N N 279 ILE HA H N N 280 ILE HB H N N 281 ILE HG12 H N N 282 ILE HG13 H N N 283 ILE HG21 H N N 284 ILE HG22 H N N 285 ILE HG23 H N N 286 ILE HD11 H N N 287 ILE HD12 H N N 288 ILE HD13 H N N 289 ILE HXT H N N 290 LEU N N N N 291 LEU CA C N S 292 LEU C C N N 293 LEU O O N N 294 LEU CB C N N 295 LEU CG C N N 296 LEU CD1 C N N 297 LEU CD2 C N N 298 LEU OXT O N N 299 LEU H H N N 300 LEU H2 H N N 301 LEU HA H N N 302 LEU HB2 H N N 303 LEU HB3 H N N 304 LEU HG H N N 305 LEU HD11 H N N 306 LEU HD12 H N N 307 LEU HD13 H N N 308 LEU HD21 H N N 309 LEU HD22 H N N 310 LEU HD23 H N N 311 LEU HXT H N N 312 LYS N N N N 313 LYS CA C N S 314 LYS C C N N 315 LYS O O N N 316 LYS CB C N N 317 LYS CG C N N 318 LYS CD C N N 319 LYS CE C N N 320 LYS NZ N N N 321 LYS OXT O N N 322 LYS H H N N 323 LYS H2 H N N 324 LYS HA H N N 325 LYS HB2 H N N 326 LYS HB3 H N N 327 LYS HG2 H N N 328 LYS HG3 H N N 329 LYS HD2 H N N 330 LYS HD3 H N N 331 LYS HE2 H N N 332 LYS HE3 H N N 333 LYS HZ1 H N N 334 LYS HZ2 H N N 335 LYS HZ3 H N N 336 LYS HXT H N N 337 MET N N N N 338 MET CA C N S 339 MET C C N N 340 MET O O N N 341 MET CB C N N 342 MET CG C N N 343 MET SD S N N 344 MET CE C N N 345 MET OXT O N N 346 MET H H N N 347 MET H2 H N N 348 MET HA H N N 349 MET HB2 H N N 350 MET HB3 H N N 351 MET HG2 H N N 352 MET HG3 H N N 353 MET HE1 H N N 354 MET HE2 H N N 355 MET HE3 H N N 356 MET HXT H N N 357 PHE N N N N 358 PHE CA C N S 359 PHE C C N N 360 PHE O O N N 361 PHE CB C N N 362 PHE CG C Y N 363 PHE CD1 C Y N 364 PHE CD2 C Y N 365 PHE CE1 C Y N 366 PHE CE2 C Y N 367 PHE CZ C Y N 368 PHE OXT O N N 369 PHE H H N N 370 PHE H2 H N N 371 PHE HA H N N 372 PHE HB2 H N N 373 PHE HB3 H N N 374 PHE HD1 H N N 375 PHE HD2 H N N 376 PHE HE1 H N N 377 PHE HE2 H N N 378 PHE HZ H N N 379 PHE HXT H N N 380 PRO N N N N 381 PRO CA C N S 382 PRO C C N N 383 PRO O O N N 384 PRO CB C N N 385 PRO CG C N N 386 PRO CD C N N 387 PRO OXT O N N 388 PRO H H N N 389 PRO HA H N N 390 PRO HB2 H N N 391 PRO HB3 H N N 392 PRO HG2 H N N 393 PRO HG3 H N N 394 PRO HD2 H N N 395 PRO HD3 H N N 396 PRO HXT H N N 397 SER N N N N 398 SER CA C N S 399 SER C C N N 400 SER O O N N 401 SER CB C N N 402 SER OG O N N 403 SER OXT O N N 404 SER H H N N 405 SER H2 H N N 406 SER HA H N N 407 SER HB2 H N N 408 SER HB3 H N N 409 SER HG H N N 410 SER HXT H N N 411 THR N N N N 412 THR CA C N S 413 THR C C N N 414 THR O O N N 415 THR CB C N R 416 THR OG1 O N N 417 THR CG2 C N N 418 THR OXT O N N 419 THR H H N N 420 THR H2 H N N 421 THR HA H N N 422 THR HB H N N 423 THR HG1 H N N 424 THR HG21 H N N 425 THR HG22 H N N 426 THR HG23 H N N 427 THR HXT H N N 428 TYR N N N N 429 TYR CA C N S 430 TYR C C N N 431 TYR O O N N 432 TYR CB C N N 433 TYR CG C Y N 434 TYR CD1 C Y N 435 TYR CD2 C Y N 436 TYR CE1 C Y N 437 TYR CE2 C Y N 438 TYR CZ C Y N 439 TYR OH O N N 440 TYR OXT O N N 441 TYR H H N N 442 TYR H2 H N N 443 TYR HA H N N 444 TYR HB2 H N N 445 TYR HB3 H N N 446 TYR HD1 H N N 447 TYR HD2 H N N 448 TYR HE1 H N N 449 TYR HE2 H N N 450 TYR HH H N N 451 TYR HXT H N N 452 VAL N N N N 453 VAL CA C N S 454 VAL C C N N 455 VAL O O N N 456 VAL CB C N N 457 VAL CG1 C N N 458 VAL CG2 C N N 459 VAL OXT O N N 460 VAL H H N N 461 VAL H2 H N N 462 VAL HA H N N 463 VAL HB H N N 464 VAL HG11 H N N 465 VAL HG12 H N N 466 VAL HG13 H N N 467 VAL HG21 H N N 468 VAL HG22 H N N 469 VAL HG23 H N N 470 VAL HXT H N N 471 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 HOH O H1 sing N N 265 HOH O H2 sing N N 266 ILE N CA sing N N 267 ILE N H sing N N 268 ILE N H2 sing N N 269 ILE CA C sing N N 270 ILE CA CB sing N N 271 ILE CA HA sing N N 272 ILE C O doub N N 273 ILE C OXT sing N N 274 ILE CB CG1 sing N N 275 ILE CB CG2 sing N N 276 ILE CB HB sing N N 277 ILE CG1 CD1 sing N N 278 ILE CG1 HG12 sing N N 279 ILE CG1 HG13 sing N N 280 ILE CG2 HG21 sing N N 281 ILE CG2 HG22 sing N N 282 ILE CG2 HG23 sing N N 283 ILE CD1 HD11 sing N N 284 ILE CD1 HD12 sing N N 285 ILE CD1 HD13 sing N N 286 ILE OXT HXT sing N N 287 LEU N CA sing N N 288 LEU N H sing N N 289 LEU N H2 sing N N 290 LEU CA C sing N N 291 LEU CA CB sing N N 292 LEU CA HA sing N N 293 LEU C O doub N N 294 LEU C OXT sing N N 295 LEU CB CG sing N N 296 LEU CB HB2 sing N N 297 LEU CB HB3 sing N N 298 LEU CG CD1 sing N N 299 LEU CG CD2 sing N N 300 LEU CG HG sing N N 301 LEU CD1 HD11 sing N N 302 LEU CD1 HD12 sing N N 303 LEU CD1 HD13 sing N N 304 LEU CD2 HD21 sing N N 305 LEU CD2 HD22 sing N N 306 LEU CD2 HD23 sing N N 307 LEU OXT HXT sing N N 308 LYS N CA sing N N 309 LYS N H sing N N 310 LYS N H2 sing N N 311 LYS CA C sing N N 312 LYS CA CB sing N N 313 LYS CA HA sing N N 314 LYS C O doub N N 315 LYS C OXT sing N N 316 LYS CB CG sing N N 317 LYS CB HB2 sing N N 318 LYS CB HB3 sing N N 319 LYS CG CD sing N N 320 LYS CG HG2 sing N N 321 LYS CG HG3 sing N N 322 LYS CD CE sing N N 323 LYS CD HD2 sing N N 324 LYS CD HD3 sing N N 325 LYS CE NZ sing N N 326 LYS CE HE2 sing N N 327 LYS CE HE3 sing N N 328 LYS NZ HZ1 sing N N 329 LYS NZ HZ2 sing N N 330 LYS NZ HZ3 sing N N 331 LYS OXT HXT sing N N 332 MET N CA sing N N 333 MET N H sing N N 334 MET N H2 sing N N 335 MET CA C sing N N 336 MET CA CB sing N N 337 MET CA HA sing N N 338 MET C O doub N N 339 MET C OXT sing N N 340 MET CB CG sing N N 341 MET CB HB2 sing N N 342 MET CB HB3 sing N N 343 MET CG SD sing N N 344 MET CG HG2 sing N N 345 MET CG HG3 sing N N 346 MET SD CE sing N N 347 MET CE HE1 sing N N 348 MET CE HE2 sing N N 349 MET CE HE3 sing N N 350 MET OXT HXT sing N N 351 PHE N CA sing N N 352 PHE N H sing N N 353 PHE N H2 sing N N 354 PHE CA C sing N N 355 PHE CA CB sing N N 356 PHE CA HA sing N N 357 PHE C O doub N N 358 PHE C OXT sing N N 359 PHE CB CG sing N N 360 PHE CB HB2 sing N N 361 PHE CB HB3 sing N N 362 PHE CG CD1 doub Y N 363 PHE CG CD2 sing Y N 364 PHE CD1 CE1 sing Y N 365 PHE CD1 HD1 sing N N 366 PHE CD2 CE2 doub Y N 367 PHE CD2 HD2 sing N N 368 PHE CE1 CZ doub Y N 369 PHE CE1 HE1 sing N N 370 PHE CE2 CZ sing Y N 371 PHE CE2 HE2 sing N N 372 PHE CZ HZ sing N N 373 PHE OXT HXT sing N N 374 PRO N CA sing N N 375 PRO N CD sing N N 376 PRO N H sing N N 377 PRO CA C sing N N 378 PRO CA CB sing N N 379 PRO CA HA sing N N 380 PRO C O doub N N 381 PRO C OXT sing N N 382 PRO CB CG sing N N 383 PRO CB HB2 sing N N 384 PRO CB HB3 sing N N 385 PRO CG CD sing N N 386 PRO CG HG2 sing N N 387 PRO CG HG3 sing N N 388 PRO CD HD2 sing N N 389 PRO CD HD3 sing N N 390 PRO OXT HXT sing N N 391 SER N CA sing N N 392 SER N H sing N N 393 SER N H2 sing N N 394 SER CA C sing N N 395 SER CA CB sing N N 396 SER CA HA sing N N 397 SER C O doub N N 398 SER C OXT sing N N 399 SER CB OG sing N N 400 SER CB HB2 sing N N 401 SER CB HB3 sing N N 402 SER OG HG sing N N 403 SER OXT HXT sing N N 404 THR N CA sing N N 405 THR N H sing N N 406 THR N H2 sing N N 407 THR CA C sing N N 408 THR CA CB sing N N 409 THR CA HA sing N N 410 THR C O doub N N 411 THR C OXT sing N N 412 THR CB OG1 sing N N 413 THR CB CG2 sing N N 414 THR CB HB sing N N 415 THR OG1 HG1 sing N N 416 THR CG2 HG21 sing N N 417 THR CG2 HG22 sing N N 418 THR CG2 HG23 sing N N 419 THR OXT HXT sing N N 420 TYR N CA sing N N 421 TYR N H sing N N 422 TYR N H2 sing N N 423 TYR CA C sing N N 424 TYR CA CB sing N N 425 TYR CA HA sing N N 426 TYR C O doub N N 427 TYR C OXT sing N N 428 TYR CB CG sing N N 429 TYR CB HB2 sing N N 430 TYR CB HB3 sing N N 431 TYR CG CD1 doub Y N 432 TYR CG CD2 sing Y N 433 TYR CD1 CE1 sing Y N 434 TYR CD1 HD1 sing N N 435 TYR CD2 CE2 doub Y N 436 TYR CD2 HD2 sing N N 437 TYR CE1 CZ doub Y N 438 TYR CE1 HE1 sing N N 439 TYR CE2 CZ sing Y N 440 TYR CE2 HE2 sing N N 441 TYR CZ OH sing N N 442 TYR OH HH sing N N 443 TYR OXT HXT sing N N 444 VAL N CA sing N N 445 VAL N H sing N N 446 VAL N H2 sing N N 447 VAL CA C sing N N 448 VAL CA CB sing N N 449 VAL CA HA sing N N 450 VAL C O doub N N 451 VAL C OXT sing N N 452 VAL CB CG1 sing N N 453 VAL CB CG2 sing N N 454 VAL CB HB sing N N 455 VAL CG1 HG11 sing N N 456 VAL CG1 HG12 sing N N 457 VAL CG1 HG13 sing N N 458 VAL CG2 HG21 sing N N 459 VAL CG2 HG22 sing N N 460 VAL CG2 HG23 sing N N 461 VAL OXT HXT sing N N 462 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3GFI 'double helix' 3GFI 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DA 3 1_555 D DT 10 1_555 -0.813 -0.517 0.144 -4.011 -21.918 -3.935 1 D_DA10:DT13_E D 10 ? E 13 ? 20 1 1 C DC 4 1_555 D DG 9 1_555 -0.086 0.211 0.145 -3.998 -14.210 10.790 2 D_DC11:DG12_E D 11 ? E 12 ? ? 1 1 C DA 5 1_555 D DT 8 1_555 0.073 -0.186 0.233 -7.542 -9.727 0.050 3 D_DA12:DT11_E D 12 ? E 11 ? 20 1 1 C DA 6 1_555 D DT 7 1_555 1.024 0.040 0.232 -5.343 -10.194 6.066 4 D_DA13:DT10_E D 13 ? E 10 ? 20 1 1 C DT 7 1_555 D DA 6 1_555 -0.327 0.111 -0.032 4.021 -9.282 -0.350 5 D_DT14:DA9_E D 14 ? E 9 ? 20 1 1 C DA 8 1_555 D DT 5 1_555 -1.153 -0.481 -0.071 -2.980 -29.279 -12.235 6 D_DA15:DT8_E D 15 ? E 8 ? 20 1 1 C DG 9 1_555 D DC 4 1_555 0.554 0.040 0.320 0.470 -23.616 -1.065 7 D_DG16:DC7_E D 16 ? E 7 ? 19 1 1 C DC 10 1_555 D DG 3 1_555 -1.075 -0.231 -0.122 6.878 -17.497 0.924 8 D_DC17:DG6_E D 17 ? E 6 ? 19 1 1 C DA 11 1_555 D DT 2 1_555 -0.902 -0.428 0.780 2.565 -14.944 -40.093 9 D_DA18:DT5_E D 18 ? E 5 ? 20 1 1 C DA 12 1_555 D DT 1 1_555 0.086 -0.310 0.198 13.689 -2.333 -4.554 10 D_DA19:DT4_E D 19 ? E 4 ? 20 1 1 C DT 1 1_555 C DA 2 4_565 0.859 -0.623 0.138 4.483 -13.122 -2.036 11 D_DT8:DA9_D D 8 ? D 9 ? 20 1 1 C DA 2 1_555 C DT 1 4_565 -0.859 -0.623 0.138 -4.483 -13.122 -2.036 12 D_DA9:DT8_D D 9 ? D 8 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DA 3 1_555 D DT 10 1_555 C DC 4 1_555 D DG 9 1_555 0.607 -0.264 3.151 1.699 5.524 38.574 -1.038 -0.712 3.108 8.305 -2.554 38.988 1 DD_DA10DC11:DG12DT13_EE D 10 ? E 13 ? D 11 ? E 12 ? 1 C DC 4 1_555 D DG 9 1_555 C DA 5 1_555 D DT 8 1_555 -0.683 -0.783 3.349 -0.825 7.697 35.422 -2.342 0.982 3.130 12.467 1.336 36.231 2 DD_DC11DA12:DT11DG12_EE D 11 ? E 12 ? D 12 ? E 11 ? 1 C DA 5 1_555 D DT 8 1_555 C DA 6 1_555 D DT 7 1_555 0.911 -0.209 3.184 2.215 6.973 34.971 -1.325 -1.172 3.136 11.449 -3.636 35.705 3 DD_DA12DA13:DT10DT11_EE D 12 ? E 11 ? D 13 ? E 10 ? 1 C DA 6 1_555 D DT 7 1_555 C DT 7 1_555 D DA 6 1_555 -0.453 -0.767 2.960 2.687 5.343 24.720 -3.085 1.705 2.674 12.253 -6.162 25.423 4 DD_DA13DT14:DA9DT10_EE D 13 ? E 10 ? D 14 ? E 9 ? 1 C DT 7 1_555 D DA 6 1_555 C DA 8 1_555 D DT 5 1_555 -0.304 0.523 3.504 1.408 -0.278 33.150 0.965 0.784 3.484 -0.486 -2.467 33.180 5 DD_DT14DA15:DT8DA9_EE D 14 ? E 9 ? D 15 ? E 8 ? 1 C DA 8 1_555 D DT 5 1_555 C DG 9 1_555 D DC 4 1_555 0.560 -0.097 3.103 -1.502 11.763 45.913 -1.024 -0.813 2.975 14.790 1.888 47.339 6 DD_DA15DG16:DC7DT8_EE D 15 ? E 8 ? D 16 ? E 7 ? 1 C DG 9 1_555 D DC 4 1_555 C DC 10 1_555 D DG 3 1_555 0.230 -1.144 3.133 4.944 -10.578 24.588 0.326 0.800 3.318 -23.237 -10.861 27.181 7 DD_DG16DC17:DG6DC7_EE D 16 ? E 7 ? D 17 ? E 6 ? 1 C DC 10 1_555 D DG 3 1_555 C DA 11 1_555 D DT 2 1_555 -0.666 -1.399 3.191 -8.851 -0.385 29.440 -2.566 -0.495 3.266 -0.736 16.939 30.716 8 DD_DC17DA18:DT5DG6_EE D 17 ? E 6 ? D 18 ? E 5 ? 1 C DA 11 1_555 D DT 2 1_555 C DA 12 1_555 D DT 1 1_555 1.518 -1.535 3.147 12.099 0.942 44.094 -2.062 -0.877 3.397 1.227 -15.764 45.653 9 DD_DA18DA19:DT4DT5_EE D 18 ? E 5 ? D 19 ? E 4 ? 1 C DT 1 1_555 C DA 2 4_565 C DA 2 1_555 C DT 1 4_565 0.000 -0.488 3.416 0.000 -7.197 30.187 0.559 0.000 3.437 -13.578 0.000 31.014 10 DD_DT8DA9:DT8DA9_DD D 8 ? D 9 ? D 9 ? D 8 ? # _atom_sites.entry_id 3GFI _atom_sites.fract_transf_matrix[1][1] 0.010589 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009369 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012157 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_