HEADER TRANSFERASE 27-FEB-09 3GFW TITLE CRYSTAL STRUCTURE OF HUMAN DUAL SPECIFICITY PROTEIN KINASE (TTK) IN TITLE 2 COMPLEX WITH A PYROLO-PYRIDIN LIGAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: DUAL SPECIFICITY PROTEIN KINASE TTK; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 519-808; COMPND 5 SYNONYM: PHOSPHOTYROSINE PICKED THREONINE-PROTEIN KINASE, PYT; COMPND 6 EC: 2.7.12.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MPS1L1, TTK; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-R3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS TTK, HMPS1, PYT, ESK, KINASE, DUAL SPECIFICITY, PHOSPHOTYROSINE KEYWDS 2 PICKED THREONINE KINASE, SGC, STRUCTURAL GENOMICS CONSORTIUM, ATP- KEYWDS 3 BINDING, NUCLEOTIDE-BINDING, PHOSPHOPROTEIN, SERINE/THREONINE- KEYWDS 4 PROTEIN KINASE, TRANSFERASE, TYROSINE-PROTEIN KINASE EXPDTA X-RAY DIFFRACTION AUTHOR P.FILIPPAKOPOULOS,M.SOUNDARARAJAN,H.CHOI,T.KEATES,J.M.ELKINS,O.KING, AUTHOR 2 O.FEDOROV,S.S.PICAUD,A.C.W.PIKE,F.VON DELFT,C.H.ARROWSMITH, AUTHOR 3 A.EDWARDS,J.WEIGELT,C.BOUNTRA,N.GREY,S.KNAPP,STRUCTURAL GENOMICS AUTHOR 4 CONSORTIUM (SGC) REVDAT 4 06-SEP-23 3GFW 1 REMARK SEQADV REVDAT 3 13-JUL-11 3GFW 1 VERSN REVDAT 2 01-SEP-10 3GFW 1 JRNL REVDAT 1 17-MAR-09 3GFW 0 JRNL AUTH N.KWIATKOWSKI,N.JELLUMA,P.FILIPPAKOPOULOS,M.SOUNDARARAJAN, JRNL AUTH 2 M.S.MANAK,M.KWON,H.G.CHOI,T.SIM,Q.L.DEVERAUX,S.ROTTMANN, JRNL AUTH 3 D.PELLMAN,J.V.SHAH,G.J.KOPS,S.KNAPP,N.S.GRAY JRNL TITL SMALL-MOLECULE KINASE INHIBITORS PROVIDE INSIGHT INTO MPS1 JRNL TITL 2 CELL CYCLE FUNCTION. JRNL REF NAT.CHEM.BIOL. V. 6 359 2010 JRNL REFN ISSN 1552-4450 JRNL PMID 20383151 JRNL DOI 10.1038/NCHEMBIO.345 REMARK 2 REMARK 2 RESOLUTION. 2.74 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.74 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 12083 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 598 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.74 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.81 REMARK 3 REFLECTION IN BIN (WORKING SET) : 842 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.67 REMARK 3 BIN R VALUE (WORKING SET) : 0.3090 REMARK 3 BIN FREE R VALUE SET COUNT : 53 REMARK 3 BIN FREE R VALUE : 0.3840 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1987 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 67 REMARK 3 SOLVENT ATOMS : 5 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.41000 REMARK 3 B22 (A**2) : 6.89000 REMARK 3 B33 (A**2) : -1.48000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.456 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.284 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.253 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 25.804 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2101 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1396 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2846 ; 1.580 ; 1.998 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3350 ; 0.920 ; 3.005 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 250 ; 6.740 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 87 ;43.594 ;25.172 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 346 ;18.049 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ;26.734 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 314 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2268 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 382 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1263 ; 0.467 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 504 ; 0.084 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2039 ; 0.897 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 838 ; 1.472 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 807 ; 2.446 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 515 A 613 REMARK 3 ORIGIN FOR THE GROUP (A): 7.5947 23.7034 41.6948 REMARK 3 T TENSOR REMARK 3 T11: 0.1635 T22: 0.1442 REMARK 3 T33: 0.0751 T12: 0.0023 REMARK 3 T13: -0.0034 T23: 0.0987 REMARK 3 L TENSOR REMARK 3 L11: 8.7630 L22: 1.7551 REMARK 3 L33: 5.5494 L12: 1.4388 REMARK 3 L13: -0.4371 L23: -0.0930 REMARK 3 S TENSOR REMARK 3 S11: 0.0129 S12: -0.5425 S13: -0.5048 REMARK 3 S21: 0.0874 S22: -0.0851 S23: -0.1424 REMARK 3 S31: -0.0634 S32: 0.2801 S33: 0.0722 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 614 A 725 REMARK 3 ORIGIN FOR THE GROUP (A): -8.9450 17.1819 30.2892 REMARK 3 T TENSOR REMARK 3 T11: 0.0735 T22: 0.0979 REMARK 3 T33: 0.1650 T12: 0.0497 REMARK 3 T13: 0.0050 T23: 0.0789 REMARK 3 L TENSOR REMARK 3 L11: 7.5917 L22: 5.0484 REMARK 3 L33: 6.2108 L12: 1.8600 REMARK 3 L13: 1.9380 L23: 0.0970 REMARK 3 S TENSOR REMARK 3 S11: 0.0471 S12: -0.2050 S13: -0.7685 REMARK 3 S21: 0.0646 S22: -0.0744 S23: 0.0581 REMARK 3 S31: 0.3640 S32: 0.1300 S33: 0.0272 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 726 A 794 REMARK 3 ORIGIN FOR THE GROUP (A): -17.1710 9.6307 24.0595 REMARK 3 T TENSOR REMARK 3 T11: 0.1624 T22: 0.4182 REMARK 3 T33: 0.7519 T12: -0.0794 REMARK 3 T13: -0.0269 T23: -0.1058 REMARK 3 L TENSOR REMARK 3 L11: 3.1313 L22: 7.2250 REMARK 3 L33: 2.4782 L12: -1.9707 REMARK 3 L13: 0.2801 L23: -0.5337 REMARK 3 S TENSOR REMARK 3 S11: 0.1143 S12: 0.4336 S13: -1.4332 REMARK 3 S21: -0.2294 S22: -0.0853 S23: 0.4794 REMARK 3 S31: 0.4929 S32: -0.5068 S33: -0.0290 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 U VALUES: RESIDUAL ONLY REMARK 4 REMARK 4 3GFW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1000051808. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAY-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97642 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12085 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.740 REMARK 200 RESOLUTION RANGE LOW (A) : 60.302 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : 0.07300 REMARK 200 FOR THE DATA SET : 10.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.74 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.89 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.64700 REMARK 200 R SYM FOR SHELL (I) : 0.64700 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3CEK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40% PEG300, 0.25M NACL, 0.1M NA/K REMARK 280 PHOSPHATE PH 5.6, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 35.48450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 57.34300 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 55.58700 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 35.48450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 57.34300 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 55.58700 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 35.48450 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 57.34300 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 55.58700 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 35.48450 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 57.34300 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 55.58700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 496 REMARK 465 HIS A 497 REMARK 465 HIS A 498 REMARK 465 HIS A 499 REMARK 465 HIS A 500 REMARK 465 HIS A 501 REMARK 465 HIS A 502 REMARK 465 SER A 503 REMARK 465 SER A 504 REMARK 465 GLY A 505 REMARK 465 VAL A 506 REMARK 465 ASP A 507 REMARK 465 LEU A 508 REMARK 465 GLY A 509 REMARK 465 THR A 510 REMARK 465 GLU A 511 REMARK 465 ASN A 512 REMARK 465 LEU A 513 REMARK 465 TYR A 514 REMARK 465 ASN A 669 REMARK 465 GLN A 670 REMARK 465 MET A 671 REMARK 465 GLN A 672 REMARK 465 PRO A 673 REMARK 465 ASP A 674 REMARK 465 THR A 675 REMARK 465 THR A 676 REMARK 465 SER A 677 REMARK 465 VAL A 678 REMARK 465 VAL A 679 REMARK 465 LYS A 680 REMARK 465 ASP A 681 REMARK 465 SER A 682 REMARK 465 GLN A 683 REMARK 465 VAL A 684 REMARK 465 MET A 698 REMARK 465 SER A 699 REMARK 465 SER A 700 REMARK 465 SER A 701 REMARK 465 ARG A 702 REMARK 465 GLU A 703 REMARK 465 ASN A 704 REMARK 465 GLY A 705 REMARK 465 LYS A 706 REMARK 465 SER A 707 REMARK 465 LYS A 708 REMARK 465 THR A 795 REMARK 465 HIS A 796 REMARK 465 PRO A 797 REMARK 465 VAL A 798 REMARK 465 ASN A 799 REMARK 465 GLN A 800 REMARK 465 MET A 801 REMARK 465 ALA A 802 REMARK 465 LYS A 803 REMARK 465 GLY A 804 REMARK 465 THR A 805 REMARK 465 THR A 806 REMARK 465 GLU A 807 REMARK 465 GLU A 808 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 515 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG A 523 CZ NH1 NH2 REMARK 470 LYS A 529 NZ REMARK 470 SER A 533 OG REMARK 470 SER A 536 OG REMARK 470 LYS A 538 CD CE NZ REMARK 470 LYS A 546 CE NZ REMARK 470 LYS A 547 CD CE NZ REMARK 470 GLU A 558 CG CD OE1 OE2 REMARK 470 GLU A 559 CG CD OE1 OE2 REMARK 470 LYS A 577 CE NZ REMARK 470 GLN A 580 CG CD OE1 NE2 REMARK 470 LYS A 614 CE NZ REMARK 470 LYS A 615 CG CD CE NZ REMARK 470 LYS A 616 CE NZ REMARK 470 LYS A 617 CG CD CE NZ REMARK 470 ASP A 657 CG OD1 OD2 REMARK 470 THR A 686 OG1 CG2 REMARK 470 LYS A 696 CG CD CE NZ REMARK 470 SER A 709 OG REMARK 470 LYS A 710 CG CD CE NZ REMARK 470 ILE A 711 CD1 REMARK 470 GLN A 740 CG CD OE1 NE2 REMARK 470 GLU A 753 CD OE1 OE2 REMARK 470 ASP A 758 CG OD1 OD2 REMARK 470 LYS A 769 CG CD CE NZ REMARK 470 LYS A 773 NZ REMARK 470 LYS A 777 CE NZ REMARK 470 GLN A 794 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 561 OG1 THR A 564 1.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 536 75.14 -104.77 REMARK 500 SER A 582 128.84 -172.83 REMARK 500 ASP A 647 59.05 -153.21 REMARK 500 ASP A 657 61.27 63.54 REMARK 500 THR A 686 -70.14 -84.76 REMARK 500 ILE A 738 -65.55 -27.76 REMARK 500 ASN A 751 4.40 -63.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 535 SER A 536 -34.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 7PE A 809 REMARK 610 7PE A 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE S22 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 7PE A 809 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 7PE A 3 DBREF 3GFW A 519 808 UNP P33981 TTK_HUMAN 519 808 SEQADV 3GFW MET A 496 UNP P33981 EXPRESSION TAG SEQADV 3GFW HIS A 497 UNP P33981 EXPRESSION TAG SEQADV 3GFW HIS A 498 UNP P33981 EXPRESSION TAG SEQADV 3GFW HIS A 499 UNP P33981 EXPRESSION TAG SEQADV 3GFW HIS A 500 UNP P33981 EXPRESSION TAG SEQADV 3GFW HIS A 501 UNP P33981 EXPRESSION TAG SEQADV 3GFW HIS A 502 UNP P33981 EXPRESSION TAG SEQADV 3GFW SER A 503 UNP P33981 EXPRESSION TAG SEQADV 3GFW SER A 504 UNP P33981 EXPRESSION TAG SEQADV 3GFW GLY A 505 UNP P33981 EXPRESSION TAG SEQADV 3GFW VAL A 506 UNP P33981 EXPRESSION TAG SEQADV 3GFW ASP A 507 UNP P33981 EXPRESSION TAG SEQADV 3GFW LEU A 508 UNP P33981 EXPRESSION TAG SEQADV 3GFW GLY A 509 UNP P33981 EXPRESSION TAG SEQADV 3GFW THR A 510 UNP P33981 EXPRESSION TAG SEQADV 3GFW GLU A 511 UNP P33981 EXPRESSION TAG SEQADV 3GFW ASN A 512 UNP P33981 EXPRESSION TAG SEQADV 3GFW LEU A 513 UNP P33981 EXPRESSION TAG SEQADV 3GFW TYR A 514 UNP P33981 EXPRESSION TAG SEQADV 3GFW PHE A 515 UNP P33981 EXPRESSION TAG SEQADV 3GFW GLN A 516 UNP P33981 EXPRESSION TAG SEQADV 3GFW SER A 517 UNP P33981 EXPRESSION TAG SEQADV 3GFW MET A 518 UNP P33981 EXPRESSION TAG SEQRES 1 A 313 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 313 GLY THR GLU ASN LEU TYR PHE GLN SER MET SER VAL LYS SEQRES 3 A 313 GLY ARG ILE TYR SER ILE LEU LYS GLN ILE GLY SER GLY SEQRES 4 A 313 GLY SER SER LYS VAL PHE GLN VAL LEU ASN GLU LYS LYS SEQRES 5 A 313 GLN ILE TYR ALA ILE LYS TYR VAL ASN LEU GLU GLU ALA SEQRES 6 A 313 ASP ASN GLN THR LEU ASP SER TYR ARG ASN GLU ILE ALA SEQRES 7 A 313 TYR LEU ASN LYS LEU GLN GLN HIS SER ASP LYS ILE ILE SEQRES 8 A 313 ARG LEU TYR ASP TYR GLU ILE THR ASP GLN TYR ILE TYR SEQRES 9 A 313 MET VAL MET GLU CYS GLY ASN ILE ASP LEU ASN SER TRP SEQRES 10 A 313 LEU LYS LYS LYS LYS SER ILE ASP PRO TRP GLU ARG LYS SEQRES 11 A 313 SER TYR TRP LYS ASN MET LEU GLU ALA VAL HIS THR ILE SEQRES 12 A 313 HIS GLN HIS GLY ILE VAL HIS SER ASP LEU LYS PRO ALA SEQRES 13 A 313 ASN PHE LEU ILE VAL ASP GLY MET LEU LYS LEU ILE ASP SEQRES 14 A 313 PHE GLY ILE ALA ASN GLN MET GLN PRO ASP THR THR SER SEQRES 15 A 313 VAL VAL LYS ASP SER GLN VAL GLY THR VAL ASN TYR MET SEQRES 16 A 313 PRO PRO GLU ALA ILE LYS ASP MET SER SER SER ARG GLU SEQRES 17 A 313 ASN GLY LYS SER LYS SER LYS ILE SER PRO LYS SER ASP SEQRES 18 A 313 VAL TRP SER LEU GLY CYS ILE LEU TYR TYR MET THR TYR SEQRES 19 A 313 GLY LYS THR PRO PHE GLN GLN ILE ILE ASN GLN ILE SER SEQRES 20 A 313 LYS LEU HIS ALA ILE ILE ASP PRO ASN HIS GLU ILE GLU SEQRES 21 A 313 PHE PRO ASP ILE PRO GLU LYS ASP LEU GLN ASP VAL LEU SEQRES 22 A 313 LYS CYS CYS LEU LYS ARG ASP PRO LYS GLN ARG ILE SER SEQRES 23 A 313 ILE PRO GLU LEU LEU ALA HIS PRO TYR VAL GLN ILE GLN SEQRES 24 A 313 THR HIS PRO VAL ASN GLN MET ALA LYS GLY THR THR GLU SEQRES 25 A 313 GLU HET S22 A 1 38 HET 7PE A 809 16 HET 7PE A 3 13 HETNAM S22 1-(4-(4-(2-(ISOPROPYLSULFONYL)PHENYLAMINO)-1H- HETNAM 2 S22 PYRROLO[2,3-B]PYRIDIN-6-YLAMINO)-3-METHOXYPHENYL) HETNAM 3 S22 PIPERIDIN-4-OL HETNAM 7PE 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY) HETNAM 2 7PE ETHOXY)ETHANOL HETSYN 7PE POLYETHYLENE GLYCOL FRAGMENT FORMUL 2 S22 C28 H33 N5 O4 S FORMUL 3 7PE 2(C14 H30 O7) FORMUL 5 HOH *5(H2 O) HELIX 1 1 ASP A 561 SER A 582 1 22 HELIX 2 2 LEU A 609 LYS A 615 1 7 HELIX 3 3 ASP A 620 HIS A 641 1 22 HELIX 4 4 LYS A 649 ALA A 651 5 3 HELIX 5 5 THR A 686 MET A 690 5 5 HELIX 6 6 PRO A 691 LYS A 696 1 6 HELIX 7 7 PRO A 713 GLY A 730 1 18 HELIX 8 8 ASN A 739 ASP A 749 1 11 HELIX 9 9 GLU A 761 LEU A 772 1 12 HELIX 10 10 SER A 781 LEU A 786 1 6 HELIX 11 11 HIS A 788 ILE A 793 1 6 SHEET 1 A 6 SER A 517 VAL A 520 0 SHEET 2 A 6 ARG A 523 GLY A 532 -1 O TYR A 525 N MET A 518 SHEET 3 A 6 SER A 537 LEU A 543 -1 O GLN A 541 N LYS A 529 SHEET 4 A 6 ILE A 549 ASN A 556 -1 O TYR A 550 N VAL A 542 SHEET 5 A 6 TYR A 597 GLU A 603 -1 O MET A 600 N LYS A 553 SHEET 6 A 6 LEU A 588 ILE A 593 -1 N ASP A 590 O VAL A 601 SHEET 1 B 3 ILE A 607 ASP A 608 0 SHEET 2 B 3 PHE A 653 VAL A 656 -1 O ILE A 655 N ILE A 607 SHEET 3 B 3 MET A 659 LEU A 662 -1 O MET A 659 N VAL A 656 SITE 1 AC1 13 ILE A 531 GLY A 532 GLN A 541 ALA A 551 SITE 2 AC1 13 GLU A 603 GLY A 605 ASN A 606 ASP A 608 SITE 3 AC1 13 SER A 611 ALA A 651 LEU A 654 ILE A 663 SITE 4 AC1 13 7PE A 809 SITE 1 AC2 6 S22 A 1 LYS A 553 VAL A 555 MET A 600 SITE 2 AC2 6 MET A 602 ILE A 663 SITE 1 AC3 3 ASN A 576 TYR A 589 TYR A 591 CRYST1 70.969 114.686 111.174 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014091 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008719 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008995 0.00000