data_3GGD # _entry.id 3GGD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3GGD pdb_00003ggd 10.2210/pdb3ggd/pdb RCSB RCSB051825 ? ? WWPDB D_1000051825 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 379018 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3GGD _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-02-27 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of SAM-dependent methyltransferase (YP_325210.1) from ANABAENA VARIABILIS ATCC 29413 at 2.11 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3GGD _cell.length_a 112.520 _cell.length_b 112.520 _cell.length_c 112.560 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3GGD _symmetry.Int_Tables_number 92 _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'SAM-dependent methyltransferase' 27763.178 1 ? ? ? ? 2 non-polymer syn 'UNKNOWN LIGAND' ? 1 ? ? ? ? 3 non-polymer syn 'COBALT (II) ION' 58.933 1 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 5 non-polymer syn S-ADENOSYL-L-HOMOCYSTEINE 384.411 1 ? ? ? ? 6 non-polymer syn IMIDAZOLE 69.085 1 ? ? ? ? 7 non-polymer syn 'SULFATE ION' 96.063 4 ? ? ? ? 8 non-polymer syn 1,2-ETHANEDIOL 62.068 9 ? ? ? ? 9 water nat water 18.015 192 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)EKLSAIKKPDINVADAWEQYWNKTLVNSTPVLWDANVERAVVVDLPRFELLFNPELPLIDFACGNGTQTKFLSQ FFPRVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIY(MSE)RTGFHHIPVEKRELLGQSLRIL LGKQGA(MSE)YLIELGTGCIDFFNSLLEKYGQLPYELLLV(MSE)EHGIRPGIFTAEDIELYFPDFEILSQGEGLFQSI HKLPDGNYATPPAFWAVIKHR ; _entity_poly.pdbx_seq_one_letter_code_can ;GMEKLSAIKKPDINVADAWEQYWNKTLVNSTPVLWDANVERAVVVDLPRFELLFNPELPLIDFACGNGTQTKFLSQFFPR VIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMY LIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYFPDFEILSQGEGLFQSIHKLPDGNYATPPAFWA VIKHR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 379018 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 GLU n 1 4 LYS n 1 5 LEU n 1 6 SER n 1 7 ALA n 1 8 ILE n 1 9 LYS n 1 10 LYS n 1 11 PRO n 1 12 ASP n 1 13 ILE n 1 14 ASN n 1 15 VAL n 1 16 ALA n 1 17 ASP n 1 18 ALA n 1 19 TRP n 1 20 GLU n 1 21 GLN n 1 22 TYR n 1 23 TRP n 1 24 ASN n 1 25 LYS n 1 26 THR n 1 27 LEU n 1 28 VAL n 1 29 ASN n 1 30 SER n 1 31 THR n 1 32 PRO n 1 33 VAL n 1 34 LEU n 1 35 TRP n 1 36 ASP n 1 37 ALA n 1 38 ASN n 1 39 VAL n 1 40 GLU n 1 41 ARG n 1 42 ALA n 1 43 VAL n 1 44 VAL n 1 45 VAL n 1 46 ASP n 1 47 LEU n 1 48 PRO n 1 49 ARG n 1 50 PHE n 1 51 GLU n 1 52 LEU n 1 53 LEU n 1 54 PHE n 1 55 ASN n 1 56 PRO n 1 57 GLU n 1 58 LEU n 1 59 PRO n 1 60 LEU n 1 61 ILE n 1 62 ASP n 1 63 PHE n 1 64 ALA n 1 65 CYS n 1 66 GLY n 1 67 ASN n 1 68 GLY n 1 69 THR n 1 70 GLN n 1 71 THR n 1 72 LYS n 1 73 PHE n 1 74 LEU n 1 75 SER n 1 76 GLN n 1 77 PHE n 1 78 PHE n 1 79 PRO n 1 80 ARG n 1 81 VAL n 1 82 ILE n 1 83 GLY n 1 84 LEU n 1 85 ASP n 1 86 VAL n 1 87 SER n 1 88 LYS n 1 89 SER n 1 90 ALA n 1 91 LEU n 1 92 GLU n 1 93 ILE n 1 94 ALA n 1 95 ALA n 1 96 LYS n 1 97 GLU n 1 98 ASN n 1 99 THR n 1 100 ALA n 1 101 ALA n 1 102 ASN n 1 103 ILE n 1 104 SER n 1 105 TYR n 1 106 ARG n 1 107 LEU n 1 108 LEU n 1 109 ASP n 1 110 GLY n 1 111 LEU n 1 112 VAL n 1 113 PRO n 1 114 GLU n 1 115 GLN n 1 116 ALA n 1 117 ALA n 1 118 GLN n 1 119 ILE n 1 120 HIS n 1 121 SER n 1 122 GLU n 1 123 ILE n 1 124 GLY n 1 125 ASP n 1 126 ALA n 1 127 ASN n 1 128 ILE n 1 129 TYR n 1 130 MSE n 1 131 ARG n 1 132 THR n 1 133 GLY n 1 134 PHE n 1 135 HIS n 1 136 HIS n 1 137 ILE n 1 138 PRO n 1 139 VAL n 1 140 GLU n 1 141 LYS n 1 142 ARG n 1 143 GLU n 1 144 LEU n 1 145 LEU n 1 146 GLY n 1 147 GLN n 1 148 SER n 1 149 LEU n 1 150 ARG n 1 151 ILE n 1 152 LEU n 1 153 LEU n 1 154 GLY n 1 155 LYS n 1 156 GLN n 1 157 GLY n 1 158 ALA n 1 159 MSE n 1 160 TYR n 1 161 LEU n 1 162 ILE n 1 163 GLU n 1 164 LEU n 1 165 GLY n 1 166 THR n 1 167 GLY n 1 168 CYS n 1 169 ILE n 1 170 ASP n 1 171 PHE n 1 172 PHE n 1 173 ASN n 1 174 SER n 1 175 LEU n 1 176 LEU n 1 177 GLU n 1 178 LYS n 1 179 TYR n 1 180 GLY n 1 181 GLN n 1 182 LEU n 1 183 PRO n 1 184 TYR n 1 185 GLU n 1 186 LEU n 1 187 LEU n 1 188 LEU n 1 189 VAL n 1 190 MSE n 1 191 GLU n 1 192 HIS n 1 193 GLY n 1 194 ILE n 1 195 ARG n 1 196 PRO n 1 197 GLY n 1 198 ILE n 1 199 PHE n 1 200 THR n 1 201 ALA n 1 202 GLU n 1 203 ASP n 1 204 ILE n 1 205 GLU n 1 206 LEU n 1 207 TYR n 1 208 PHE n 1 209 PRO n 1 210 ASP n 1 211 PHE n 1 212 GLU n 1 213 ILE n 1 214 LEU n 1 215 SER n 1 216 GLN n 1 217 GLY n 1 218 GLU n 1 219 GLY n 1 220 LEU n 1 221 PHE n 1 222 GLN n 1 223 SER n 1 224 ILE n 1 225 HIS n 1 226 LYS n 1 227 LEU n 1 228 PRO n 1 229 ASP n 1 230 GLY n 1 231 ASN n 1 232 TYR n 1 233 ALA n 1 234 THR n 1 235 PRO n 1 236 PRO n 1 237 ALA n 1 238 PHE n 1 239 TRP n 1 240 ALA n 1 241 VAL n 1 242 ILE n 1 243 LYS n 1 244 HIS n 1 245 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Ava_4718, YP_325210.1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Anabaena variabilis ATCC 29413' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 240292 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 29413 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q3M3X1_ANAVT _struct_ref.pdbx_db_accession Q3M3X1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MEKLSAIKKPDINVADAWEQYWNKTLVNSTPVLWDANVERAVVVDLPRFELLFNPELPLIDFACGNGTQTKFLSQFFPRV IGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYL IELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYFPDFEILSQGEGLFQSIHKLPDGNYATPPAFWAV IKHR ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3GGD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 245 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q3M3X1 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 244 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 244 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3GGD _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q3M3X1 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CO non-polymer . 'COBALT (II) ION' ? 'Co 2' 58.933 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IMD non-polymer . IMIDAZOLE ? 'C3 H5 N2 1' 69.085 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SAH 'L-peptide linking' n S-ADENOSYL-L-HOMOCYSTEINE ? 'C14 H20 N6 O5 S' 384.411 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNL non-polymer . 'UNKNOWN LIGAND' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3GGD # _exptl_crystal.id 1 _exptl_crystal.density_Matthews ? _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description 'DATA WERE SCALED USING XSCALE WITH FRIEDEL PAIRS KEPT AS SEPARATE WHEN COMPUTING R MERGE, COMPLETENESS AND .' _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details ;0.01M cobalt chloride, 1.8M ammonium sulfate, 0.1M MES pH 6.5, ADDITIVE: 0.001 M S-ADENOSYLMETHIONINE (SAM), NANODROP', VAPOR DIFFUSION, SITTING DROP, temperature 293K ; _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.details 'Adjustable focusing mirrors in K-B geometry' _diffrn_detector.pdbx_collection_date 2008-10-12 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111) Double Crystal Monochrometer' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.94645 1.0 2 0.97967 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline 23-ID-B _diffrn_source.type 'APS BEAMLINE 23-ID-B' _diffrn_source.pdbx_wavelength_list 0.94645,0.97967 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS # _reflns.entry_id 3GGD _reflns.d_resolution_high 2.11 _reflns.d_resolution_low 30.083 _reflns.number_obs 42096 _reflns.pdbx_Rmerge_I_obs 0.221 _reflns.percent_possible_obs 99.700 _reflns.B_iso_Wilson_estimate 40.160 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 11.000 _reflns.pdbx_redundancy 17.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.11 2.19 64498 ? 8394 1.53 2.0 ? ? ? ? ? 99.60 1 1 2.19 2.27 54873 ? 7150 1.15 2.7 ? ? ? ? ? 99.40 2 1 2.27 2.38 64861 ? 8442 0.91 3.5 ? ? ? ? ? 99.70 3 1 2.38 2.50 58989 ? 7574 0.67 4.9 ? ? ? ? ? 99.80 4 1 2.50 2.66 72014 ? 8105 0.81 6.3 ? ? ? ? ? 99.80 5 1 2.66 2.86 75514 ? 7751 0.65 8.4 ? ? ? ? ? 99.80 6 1 2.86 3.15 87968 ? 7989 0.53 12.2 ? ? ? ? ? 99.60 7 1 3.15 3.60 88970 ? 7903 0.32 17.8 ? ? ? ? ? 99.90 8 1 3.60 4.53 90866 ? 7956 0.15 24.2 ? ? ? ? ? 99.80 9 1 4.53 30.083 93659 ? 8021 0.09 27.8 ? ? ? ? ? 99.50 10 1 # _refine.entry_id 3GGD _refine.ls_d_res_high 2.110 _refine.ls_d_res_low 30.083 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.770 _refine.ls_number_reflns_obs 42037 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1.HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2.ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. 3.A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4.S-ADENOSYLMETHIONINE WAS ADDED DURING CRYSTALLIZATION. IN THIS STRUCTURE, ONLY S-ADENOSYL-L-HOMOCYSTEINE( SAH) IS MODELED IN THE CONSERVED BINDING SITE DUE TO A POSSIBLE ENZYMATICALLY RELATED DEGRADATION. AN UNKNOWN LIGAND (UNL) IS MODELED NEXT TO THE S-ADENOSYL-L- HOMOCYSTEINE IN THE SAME BINDING SITE. THE SHAPE OF THE LIGAND IS CREATINE LIKE. 5.A COBALT ION FROM THE CRYSTALLIZATION REAGENT IS MODELED IN THIS STRUCTURE. THE PRESENCE OF THE CO ATOM IS SUPPORTED BY X-RAY FLUORESCENCE MEASUREMENTS, ANOMALOUS DIFFERENCE FOURIERS AND GEOMETRY. ADDITIONAL ELECTRON DENSITY IS OBSERVED ADJACENT TO THE COBALT ION AND NEAR TO RESIDUES 203 AND 243. THIS DENSITY WAS LEFT UNMODELED. 6.AN IMIDAZOLE MOLECULE AND CHLORIDE ION FROM THE PROTEIN BUFFER, SULFATE IONS FROM THE CRYSTALLIZATION CONDITION AND ETHYLENE GLYCOL MOLECULES FROM THE CRYOPROTECTANT ARE ALSO MODELED IN THIS STRUCTURE. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.163 _refine.ls_R_factor_R_work 0.162 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.175 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 2128 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 63.133 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.950 _refine.aniso_B[2][2] 0.950 _refine.aniso_B[3][3] -1.890 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.969 _refine.correlation_coeff_Fo_to_Fc_free 0.967 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.095 _refine.pdbx_overall_ESU_R_Free 0.090 _refine.overall_SU_ML 0.062 _refine.overall_SU_B 4.175 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 138.09 _refine.B_iso_min 40.72 _refine.occupancy_max 1.00 _refine.occupancy_min 0.50 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1912 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 98 _refine_hist.number_atoms_solvent 192 _refine_hist.number_atoms_total 2202 _refine_hist.d_res_high 2.110 _refine_hist.d_res_low 30.083 # loop_ _refine_ls_restr.type _refine_ls_restr.pdbx_refine_id _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 'X-RAY DIFFRACTION' 2116 0.017 0.022 ? ? r_bond_other_d 'X-RAY DIFFRACTION' 1424 0.002 0.020 ? ? r_angle_refined_deg 'X-RAY DIFFRACTION' 2875 1.646 1.999 ? ? r_angle_other_deg 'X-RAY DIFFRACTION' 3471 0.947 3.000 ? ? r_dihedral_angle_1_deg 'X-RAY DIFFRACTION' 258 5.251 5.000 ? ? r_dihedral_angle_2_deg 'X-RAY DIFFRACTION' 92 30.854 24.348 ? ? r_dihedral_angle_3_deg 'X-RAY DIFFRACTION' 330 11.287 15.000 ? ? r_dihedral_angle_4_deg 'X-RAY DIFFRACTION' 10 15.286 15.000 ? ? r_chiral_restr 'X-RAY DIFFRACTION' 313 0.096 0.200 ? ? r_gen_planes_refined 'X-RAY DIFFRACTION' 2342 0.007 0.020 ? ? r_gen_planes_other 'X-RAY DIFFRACTION' 428 0.002 0.020 ? ? r_nbd_refined 'X-RAY DIFFRACTION' 425 0.216 0.300 ? ? r_nbd_other 'X-RAY DIFFRACTION' 1545 0.204 0.300 ? ? r_nbtor_refined 'X-RAY DIFFRACTION' 1001 0.187 0.500 ? ? r_nbtor_other 'X-RAY DIFFRACTION' 969 0.089 0.500 ? ? r_xyhbond_nbd_refined 'X-RAY DIFFRACTION' 293 0.180 0.500 ? ? r_xyhbond_nbd_other 'X-RAY DIFFRACTION' 1 0.043 0.500 ? ? r_symmetry_vdw_refined 'X-RAY DIFFRACTION' 8 0.288 0.300 ? ? r_symmetry_vdw_other 'X-RAY DIFFRACTION' 36 0.184 0.300 ? ? r_symmetry_hbond_refined 'X-RAY DIFFRACTION' 12 0.210 0.500 ? ? r_mcbond_it 'X-RAY DIFFRACTION' 1326 0.923 1.500 ? ? r_mcbond_other 'X-RAY DIFFRACTION' 505 0.217 1.500 ? ? r_mcangle_it 'X-RAY DIFFRACTION' 2048 1.302 2.000 ? ? r_scbond_it 'X-RAY DIFFRACTION' 937 2.301 3.000 ? ? r_scangle_it 'X-RAY DIFFRACTION' 827 3.204 4.500 ? ? # _refine_ls_shell.d_res_high 2.110 _refine_ls_shell.d_res_low 2.165 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.740 _refine_ls_shell.number_reflns_R_work 2863 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.205 _refine_ls_shell.R_factor_R_free 0.243 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 177 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 3040 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3GGD _struct.title 'Crystal structure of SAM-dependent methyltransferase (YP_325210.1) from ANABAENA VARIABILIS ATCC 29413 at 2.11 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;YP_325210.1, SAM-dependent methyltransferase, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, TRANSFERASE ; _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.entry_id 3GGD # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 7 ? I N N 7 ? J N N 7 ? K N N 8 ? L N N 8 ? M N N 8 ? N N N 8 ? O N N 8 ? P N N 8 ? Q N N 8 ? R N N 8 ? S N N 8 ? T N N 9 ? # _struct_biol.id 1 _struct_biol.details 'THE RESULTS FROM SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE ASSIGNMENT OF A MONOMER AS A SIGNIFICANT OLIGOMERIZATION STATE.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 14 ? SER A 30 ? ASN A 13 SER A 29 1 ? 17 HELX_P HELX_P2 2 ASN A 38 ? ARG A 41 ? ASN A 37 ARG A 40 5 ? 4 HELX_P HELX_P3 3 ALA A 42 ? GLU A 51 ? ALA A 41 GLU A 50 1 ? 10 HELX_P HELX_P4 4 GLY A 68 ? PHE A 78 ? GLY A 67 PHE A 77 1 ? 11 HELX_P HELX_P5 5 SER A 87 ? ASN A 98 ? SER A 86 ASN A 97 1 ? 12 HELX_P HELX_P6 6 VAL A 112 ? GLY A 124 ? VAL A 111 GLY A 123 1 ? 13 HELX_P HELX_P7 7 PRO A 138 ? GLU A 140 ? PRO A 137 GLU A 139 5 ? 3 HELX_P HELX_P8 8 LYS A 141 ? GLY A 154 ? LYS A 140 GLY A 153 1 ? 14 HELX_P HELX_P9 9 GLY A 167 ? GLY A 180 ? GLY A 166 GLY A 179 1 ? 14 HELX_P HELX_P10 10 PRO A 183 ? GLU A 191 ? PRO A 182 GLU A 190 1 ? 9 HELX_P HELX_P11 11 THR A 200 ? PHE A 208 ? THR A 199 PHE A 207 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A TYR 129 C ? ? ? 1_555 A MSE 130 N ? ? A TYR 128 A MSE 129 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale2 covale both ? A MSE 130 C ? ? ? 1_555 A ARG 131 N ? ? A MSE 129 A ARG 130 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale3 covale both ? A ALA 158 C ? ? ? 1_555 A MSE 159 N ? ? A ALA 157 A MSE 158 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale4 covale both ? A MSE 159 C ? ? ? 1_555 A TYR 160 N ? ? A MSE 158 A TYR 159 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale5 covale both ? A VAL 189 C A ? ? 1_555 A MSE 190 N ? ? A VAL 188 A MSE 189 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale6 covale both ? A VAL 189 C B ? ? 1_555 A MSE 190 N ? ? A VAL 188 A MSE 189 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale7 covale both ? A MSE 190 C ? ? ? 1_555 A GLU 191 N ? ? A MSE 189 A GLU 190 1_555 ? ? ? ? ? ? ? 1.317 ? ? metalc1 metalc ? ? A ASP 210 OD2 ? ? ? 1_555 C CO . CO ? ? A ASP 209 A CO 246 1_555 ? ? ? ? ? ? ? 2.018 ? ? metalc2 metalc ? ? A HIS 244 NE2 ? ? ? 1_555 C CO . CO ? ? A HIS 243 A CO 246 1_555 ? ? ? ? ? ? ? 2.051 ? ? metalc3 metalc ? ? C CO . CO ? ? ? 1_555 F IMD . N1 ? ? A CO 246 A IMD 249 1_555 ? ? ? ? ? ? ? 2.134 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 103 ? LEU A 107 ? ILE A 102 LEU A 106 A 2 VAL A 81 ? ASP A 85 ? VAL A 80 ASP A 84 A 3 LEU A 60 ? PHE A 63 ? LEU A 59 PHE A 62 A 4 ASN A 127 ? ARG A 131 ? ASN A 126 ARG A 130 A 5 ALA A 158 ? LEU A 164 ? ALA A 157 LEU A 163 A 6 ALA A 237 ? HIS A 244 ? ALA A 236 HIS A 243 A 7 PHE A 211 ? GLY A 217 ? PHE A 210 GLY A 216 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O SER A 104 ? O SER A 103 N GLY A 83 ? N GLY A 82 A 2 3 O ILE A 82 ? O ILE A 81 N ASP A 62 ? N ASP A 61 A 3 4 N ILE A 61 ? N ILE A 60 O TYR A 129 ? O TYR A 128 A 4 5 N ILE A 128 ? N ILE A 127 O TYR A 160 ? O TYR A 159 A 5 6 N GLU A 163 ? N GLU A 162 O PHE A 238 ? O PHE A 237 A 6 7 O LYS A 243 ? O LYS A 242 N GLU A 212 ? N GLU A 211 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A UNL 245 ? 5 'BINDING SITE FOR RESIDUE UNL A 245' AC2 Software A CO 246 ? 4 'BINDING SITE FOR RESIDUE CO A 246' AC3 Software A CL 247 ? 3 'BINDING SITE FOR RESIDUE CL A 247' AC4 Software A SAH 248 ? 18 'BINDING SITE FOR RESIDUE SAH A 248' AC5 Software A IMD 249 ? 9 'BINDING SITE FOR RESIDUE IMD A 249' AC6 Software A SO4 250 ? 7 'BINDING SITE FOR RESIDUE SO4 A 250' AC7 Software A SO4 251 ? 5 'BINDING SITE FOR RESIDUE SO4 A 251' AC8 Software A SO4 252 ? 5 'BINDING SITE FOR RESIDUE SO4 A 252' AC9 Software A SO4 253 ? 3 'BINDING SITE FOR RESIDUE SO4 A 253' BC1 Software A EDO 254 ? 4 'BINDING SITE FOR RESIDUE EDO A 254' BC2 Software A EDO 255 ? 6 'BINDING SITE FOR RESIDUE EDO A 255' BC3 Software A EDO 256 ? 6 'BINDING SITE FOR RESIDUE EDO A 256' BC4 Software A EDO 257 ? 8 'BINDING SITE FOR RESIDUE EDO A 257' BC5 Software A EDO 258 ? 4 'BINDING SITE FOR RESIDUE EDO A 258' BC6 Software A EDO 259 ? 5 'BINDING SITE FOR RESIDUE EDO A 259' BC7 Software A EDO 260 ? 5 'BINDING SITE FOR RESIDUE EDO A 260' BC8 Software A EDO 261 ? 6 'BINDING SITE FOR RESIDUE EDO A 261' BC9 Software A EDO 262 ? 4 'BINDING SITE FOR RESIDUE EDO A 262' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 TRP A 35 ? TRP A 34 . ? 1_555 ? 2 AC1 5 THR A 132 ? THR A 131 . ? 1_555 ? 3 AC1 5 HIS A 135 ? HIS A 134 . ? 1_555 ? 4 AC1 5 HIS A 136 ? HIS A 135 . ? 1_555 ? 5 AC1 5 PRO A 196 ? PRO A 195 . ? 1_555 ? 6 AC2 4 GLU A 51 ? GLU A 50 . ? 3_555 ? 7 AC2 4 ASP A 210 ? ASP A 209 . ? 1_555 ? 8 AC2 4 HIS A 244 ? HIS A 243 . ? 1_555 ? 9 AC2 4 IMD F . ? IMD A 249 . ? 1_555 ? 10 AC3 3 VAL A 15 ? VAL A 14 . ? 1_555 ? 11 AC3 3 LYS A 141 ? LYS A 140 . ? 1_555 ? 12 AC3 3 HOH T . ? HOH A 319 . ? 1_555 ? 13 AC4 18 VAL A 15 ? VAL A 14 . ? 1_555 ? 14 AC4 18 TRP A 19 ? TRP A 18 . ? 1_555 ? 15 AC4 18 TRP A 23 ? TRP A 22 . ? 1_555 ? 16 AC4 18 TRP A 35 ? TRP A 34 . ? 1_555 ? 17 AC4 18 ALA A 64 ? ALA A 63 . ? 1_555 ? 18 AC4 18 GLY A 66 ? GLY A 65 . ? 1_555 ? 19 AC4 18 ASP A 85 ? ASP A 84 . ? 1_555 ? 20 AC4 18 VAL A 86 ? VAL A 85 . ? 1_555 ? 21 AC4 18 LEU A 108 ? LEU A 107 . ? 1_555 ? 22 AC4 18 ASP A 109 ? ASP A 108 . ? 1_555 ? 23 AC4 18 GLY A 110 ? GLY A 109 . ? 1_555 ? 24 AC4 18 ARG A 131 ? ARG A 130 . ? 1_555 ? 25 AC4 18 THR A 132 ? THR A 131 . ? 1_555 ? 26 AC4 18 HIS A 136 ? HIS A 135 . ? 1_555 ? 27 AC4 18 HOH T . ? HOH A 263 . ? 1_555 ? 28 AC4 18 HOH T . ? HOH A 265 . ? 1_555 ? 29 AC4 18 HOH T . ? HOH A 266 . ? 1_555 ? 30 AC4 18 HOH T . ? HOH A 280 . ? 1_555 ? 31 AC5 9 VAL A 44 ? VAL A 43 . ? 3_555 ? 32 AC5 9 LEU A 47 ? LEU A 46 . ? 3_555 ? 33 AC5 9 PRO A 48 ? PRO A 47 . ? 3_555 ? 34 AC5 9 GLU A 51 ? GLU A 50 . ? 3_555 ? 35 AC5 9 ARG A 150 ? ARG A 149 . ? 1_555 ? 36 AC5 9 ASP A 210 ? ASP A 209 . ? 1_555 ? 37 AC5 9 HIS A 244 ? HIS A 243 . ? 1_555 ? 38 AC5 9 CO C . ? CO A 246 . ? 1_555 ? 39 AC5 9 HOH T . ? HOH A 268 . ? 1_555 ? 40 AC6 7 THR A 166 ? THR A 165 . ? 1_555 ? 41 AC6 7 GLY A 167 ? GLY A 166 . ? 1_555 ? 42 AC6 7 CYS A 168 ? CYS A 167 . ? 1_555 ? 43 AC6 7 ILE A 169 ? ILE A 168 . ? 1_555 ? 44 AC6 7 ASP A 170 ? ASP A 169 . ? 1_555 ? 45 AC6 7 ILE A 198 ? ILE A 197 . ? 1_555 ? 46 AC6 7 HOH T . ? HOH A 434 . ? 1_555 ? 47 AC7 5 ARG A 80 ? ARG A 79 . ? 1_555 ? 48 AC7 5 SER A 104 ? SER A 103 . ? 1_555 ? 49 AC7 5 ARG A 106 ? ARG A 105 . ? 1_555 ? 50 AC7 5 ILE A 119 ? ILE A 118 . ? 1_555 ? 51 AC7 5 HOH T . ? HOH A 422 . ? 1_555 ? 52 AC8 5 LYS A 155 ? LYS A 154 . ? 1_555 ? 53 AC8 5 GLN A 156 ? GLN A 155 . ? 1_555 ? 54 AC8 5 LYS A 243 ? LYS A 242 . ? 1_555 ? 55 AC8 5 HOH T . ? HOH A 390 . ? 1_555 ? 56 AC8 5 HOH T . ? HOH A 401 . ? 1_555 ? 57 AC9 3 ARG A 49 ? ARG A 48 . ? 1_555 ? 58 AC9 3 EDO R . ? EDO A 261 . ? 1_555 ? 59 AC9 3 HOH T . ? HOH A 288 . ? 1_555 ? 60 BC1 4 ASP A 36 ? ASP A 35 . ? 1_555 ? 61 BC1 4 ASN A 38 ? ASN A 37 . ? 1_555 ? 62 BC1 4 THR A 69 ? THR A 68 . ? 1_555 ? 63 BC1 4 HOH T . ? HOH A 278 . ? 1_555 ? 64 BC2 6 ARG A 41 ? ARG A 40 . ? 1_555 ? 65 BC2 6 ALA A 42 ? ALA A 41 . ? 1_555 ? 66 BC2 6 ASP A 46 ? ASP A 45 . ? 1_555 ? 67 BC2 6 ARG A 131 ? ARG A 130 . ? 1_555 ? 68 BC2 6 ILE A 162 ? ILE A 161 . ? 1_555 ? 69 BC2 6 GLN A 222 ? GLN A 221 . ? 1_555 ? 70 BC3 6 VAL A 44 ? VAL A 43 . ? 1_555 ? 71 BC3 6 VAL A 45 ? VAL A 44 . ? 1_555 ? 72 BC3 6 PRO A 48 ? PRO A 47 . ? 1_555 ? 73 BC3 6 GLN A 147 ? GLN A 146 . ? 4_454 ? 74 BC3 6 ARG A 150 ? ARG A 149 . ? 4_454 ? 75 BC3 6 HOH T . ? HOH A 310 . ? 4_454 ? 76 BC4 8 GLN A 76 ? GLN A 75 . ? 3_555 ? 77 BC4 8 ASP A 125 ? ASP A 124 . ? 1_555 ? 78 BC4 8 GLY A 154 ? GLY A 153 . ? 1_555 ? 79 BC4 8 LYS A 155 ? LYS A 154 . ? 1_555 ? 80 BC4 8 GLN A 156 ? GLN A 155 . ? 1_555 ? 81 BC4 8 EDO Q . ? EDO A 260 . ? 1_555 ? 82 BC4 8 HOH T . ? HOH A 300 . ? 1_555 ? 83 BC4 8 HOH T . ? HOH A 329 . ? 1_555 ? 84 BC5 4 GLU A 212 ? GLU A 211 . ? 1_555 ? 85 BC5 4 ILE A 213 ? ILE A 212 . ? 1_555 ? 86 BC5 4 HOH T . ? HOH A 306 . ? 1_555 ? 87 BC5 4 HOH T . ? HOH A 402 . ? 1_555 ? 88 BC6 5 TYR A 179 ? TYR A 178 . ? 1_555 ? 89 BC6 5 GLN A 181 ? GLN A 180 . ? 1_555 ? 90 BC6 5 PRO A 183 ? PRO A 182 . ? 1_555 ? 91 BC6 5 HIS A 225 ? HIS A 224 . ? 1_555 ? 92 BC6 5 PRO A 228 ? PRO A 227 . ? 1_555 ? 93 BC7 5 GLY A 124 ? GLY A 123 . ? 1_555 ? 94 BC7 5 ASP A 125 ? ASP A 124 . ? 1_555 ? 95 BC7 5 GLN A 156 ? GLN A 155 . ? 1_555 ? 96 BC7 5 EDO N . ? EDO A 257 . ? 1_555 ? 97 BC7 5 HOH T . ? HOH A 282 . ? 1_555 ? 98 BC8 6 ARG A 49 ? ARG A 48 . ? 1_555 ? 99 BC8 6 GLU A 218 ? GLU A 217 . ? 1_555 ? 100 BC8 6 GLY A 219 ? GLY A 218 . ? 1_555 ? 101 BC8 6 TRP A 239 ? TRP A 238 . ? 1_555 ? 102 BC8 6 SO4 J . ? SO4 A 253 . ? 1_555 ? 103 BC8 6 HOH T . ? HOH A 360 . ? 1_555 ? 104 BC9 4 ARG A 106 ? ARG A 105 . ? 1_555 ? 105 BC9 4 LEU A 107 ? LEU A 106 . ? 1_555 ? 106 BC9 4 GLN A 115 ? GLN A 114 . ? 1_555 ? 107 BC9 4 GLN A 118 ? GLN A 117 . ? 1_555 ? # _atom_sites.entry_id 3GGD _atom_sites.fract_transf_matrix[1][1] 0.008887 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008887 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008884 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL CO N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 ? ? ? A . n A 1 3 GLU 3 2 2 GLU GLU A . n A 1 4 LYS 4 3 3 LYS LYS A . n A 1 5 LEU 5 4 4 LEU LEU A . n A 1 6 SER 6 5 5 SER SER A . n A 1 7 ALA 7 6 6 ALA ALA A . n A 1 8 ILE 8 7 7 ILE ILE A . n A 1 9 LYS 9 8 8 LYS LYS A . n A 1 10 LYS 10 9 9 LYS LYS A . n A 1 11 PRO 11 10 10 PRO PRO A . n A 1 12 ASP 12 11 11 ASP ASP A . n A 1 13 ILE 13 12 12 ILE ILE A . n A 1 14 ASN 14 13 13 ASN ASN A . n A 1 15 VAL 15 14 14 VAL VAL A . n A 1 16 ALA 16 15 15 ALA ALA A . n A 1 17 ASP 17 16 16 ASP ASP A . n A 1 18 ALA 18 17 17 ALA ALA A . n A 1 19 TRP 19 18 18 TRP TRP A . n A 1 20 GLU 20 19 19 GLU GLU A . n A 1 21 GLN 21 20 20 GLN GLN A . n A 1 22 TYR 22 21 21 TYR TYR A . n A 1 23 TRP 23 22 22 TRP TRP A . n A 1 24 ASN 24 23 23 ASN ASN A . n A 1 25 LYS 25 24 24 LYS LYS A . n A 1 26 THR 26 25 25 THR THR A . n A 1 27 LEU 27 26 26 LEU LEU A . n A 1 28 VAL 28 27 27 VAL VAL A . n A 1 29 ASN 29 28 28 ASN ASN A . n A 1 30 SER 30 29 29 SER SER A . n A 1 31 THR 31 30 30 THR THR A . n A 1 32 PRO 32 31 31 PRO PRO A . n A 1 33 VAL 33 32 32 VAL VAL A . n A 1 34 LEU 34 33 33 LEU LEU A . n A 1 35 TRP 35 34 34 TRP TRP A . n A 1 36 ASP 36 35 35 ASP ASP A . n A 1 37 ALA 37 36 36 ALA ALA A . n A 1 38 ASN 38 37 37 ASN ASN A . n A 1 39 VAL 39 38 38 VAL VAL A . n A 1 40 GLU 40 39 39 GLU GLU A . n A 1 41 ARG 41 40 40 ARG ARG A . n A 1 42 ALA 42 41 41 ALA ALA A . n A 1 43 VAL 43 42 42 VAL VAL A . n A 1 44 VAL 44 43 43 VAL VAL A . n A 1 45 VAL 45 44 44 VAL VAL A . n A 1 46 ASP 46 45 45 ASP ASP A . n A 1 47 LEU 47 46 46 LEU LEU A . n A 1 48 PRO 48 47 47 PRO PRO A . n A 1 49 ARG 49 48 48 ARG ARG A . n A 1 50 PHE 50 49 49 PHE PHE A . n A 1 51 GLU 51 50 50 GLU GLU A . n A 1 52 LEU 52 51 51 LEU LEU A . n A 1 53 LEU 53 52 52 LEU LEU A . n A 1 54 PHE 54 53 53 PHE PHE A . n A 1 55 ASN 55 54 54 ASN ASN A . n A 1 56 PRO 56 55 55 PRO PRO A . n A 1 57 GLU 57 56 56 GLU GLU A . n A 1 58 LEU 58 57 57 LEU LEU A . n A 1 59 PRO 59 58 58 PRO PRO A . n A 1 60 LEU 60 59 59 LEU LEU A . n A 1 61 ILE 61 60 60 ILE ILE A . n A 1 62 ASP 62 61 61 ASP ASP A . n A 1 63 PHE 63 62 62 PHE PHE A . n A 1 64 ALA 64 63 63 ALA ALA A . n A 1 65 CYS 65 64 64 CYS CYS A . n A 1 66 GLY 66 65 65 GLY GLY A . n A 1 67 ASN 67 66 66 ASN ASN A . n A 1 68 GLY 68 67 67 GLY GLY A . n A 1 69 THR 69 68 68 THR THR A . n A 1 70 GLN 70 69 69 GLN GLN A . n A 1 71 THR 71 70 70 THR THR A . n A 1 72 LYS 72 71 71 LYS LYS A . n A 1 73 PHE 73 72 72 PHE PHE A . n A 1 74 LEU 74 73 73 LEU LEU A . n A 1 75 SER 75 74 74 SER SER A . n A 1 76 GLN 76 75 75 GLN GLN A . n A 1 77 PHE 77 76 76 PHE PHE A . n A 1 78 PHE 78 77 77 PHE PHE A . n A 1 79 PRO 79 78 78 PRO PRO A . n A 1 80 ARG 80 79 79 ARG ARG A . n A 1 81 VAL 81 80 80 VAL VAL A . n A 1 82 ILE 82 81 81 ILE ILE A . n A 1 83 GLY 83 82 82 GLY GLY A . n A 1 84 LEU 84 83 83 LEU LEU A . n A 1 85 ASP 85 84 84 ASP ASP A . n A 1 86 VAL 86 85 85 VAL VAL A . n A 1 87 SER 87 86 86 SER SER A . n A 1 88 LYS 88 87 87 LYS LYS A . n A 1 89 SER 89 88 88 SER SER A . n A 1 90 ALA 90 89 89 ALA ALA A . n A 1 91 LEU 91 90 90 LEU LEU A . n A 1 92 GLU 92 91 91 GLU GLU A . n A 1 93 ILE 93 92 92 ILE ILE A . n A 1 94 ALA 94 93 93 ALA ALA A . n A 1 95 ALA 95 94 94 ALA ALA A . n A 1 96 LYS 96 95 95 LYS LYS A . n A 1 97 GLU 97 96 96 GLU GLU A . n A 1 98 ASN 98 97 97 ASN ASN A . n A 1 99 THR 99 98 98 THR THR A . n A 1 100 ALA 100 99 99 ALA ALA A . n A 1 101 ALA 101 100 100 ALA ALA A . n A 1 102 ASN 102 101 101 ASN ASN A . n A 1 103 ILE 103 102 102 ILE ILE A . n A 1 104 SER 104 103 103 SER SER A . n A 1 105 TYR 105 104 104 TYR TYR A . n A 1 106 ARG 106 105 105 ARG ARG A . n A 1 107 LEU 107 106 106 LEU LEU A . n A 1 108 LEU 108 107 107 LEU LEU A . n A 1 109 ASP 109 108 108 ASP ASP A . n A 1 110 GLY 110 109 109 GLY GLY A . n A 1 111 LEU 111 110 110 LEU LEU A . n A 1 112 VAL 112 111 111 VAL VAL A . n A 1 113 PRO 113 112 112 PRO PRO A . n A 1 114 GLU 114 113 113 GLU GLU A . n A 1 115 GLN 115 114 114 GLN GLN A . n A 1 116 ALA 116 115 115 ALA ALA A . n A 1 117 ALA 117 116 116 ALA ALA A . n A 1 118 GLN 118 117 117 GLN GLN A . n A 1 119 ILE 119 118 118 ILE ILE A . n A 1 120 HIS 120 119 119 HIS HIS A . n A 1 121 SER 121 120 120 SER SER A . n A 1 122 GLU 122 121 121 GLU GLU A . n A 1 123 ILE 123 122 122 ILE ILE A . n A 1 124 GLY 124 123 123 GLY GLY A . n A 1 125 ASP 125 124 124 ASP ASP A . n A 1 126 ALA 126 125 125 ALA ALA A . n A 1 127 ASN 127 126 126 ASN ASN A . n A 1 128 ILE 128 127 127 ILE ILE A . n A 1 129 TYR 129 128 128 TYR TYR A . n A 1 130 MSE 130 129 129 MSE MSE A . n A 1 131 ARG 131 130 130 ARG ARG A . n A 1 132 THR 132 131 131 THR THR A . n A 1 133 GLY 133 132 132 GLY GLY A . n A 1 134 PHE 134 133 133 PHE PHE A . n A 1 135 HIS 135 134 134 HIS HIS A . n A 1 136 HIS 136 135 135 HIS HIS A . n A 1 137 ILE 137 136 136 ILE ILE A . n A 1 138 PRO 138 137 137 PRO PRO A . n A 1 139 VAL 139 138 138 VAL VAL A . n A 1 140 GLU 140 139 139 GLU GLU A . n A 1 141 LYS 141 140 140 LYS LYS A . n A 1 142 ARG 142 141 141 ARG ARG A . n A 1 143 GLU 143 142 142 GLU GLU A . n A 1 144 LEU 144 143 143 LEU LEU A . n A 1 145 LEU 145 144 144 LEU LEU A . n A 1 146 GLY 146 145 145 GLY GLY A . n A 1 147 GLN 147 146 146 GLN GLN A . n A 1 148 SER 148 147 147 SER SER A . n A 1 149 LEU 149 148 148 LEU LEU A . n A 1 150 ARG 150 149 149 ARG ARG A . n A 1 151 ILE 151 150 150 ILE ILE A . n A 1 152 LEU 152 151 151 LEU LEU A . n A 1 153 LEU 153 152 152 LEU LEU A . n A 1 154 GLY 154 153 153 GLY GLY A . n A 1 155 LYS 155 154 154 LYS LYS A . n A 1 156 GLN 156 155 155 GLN GLN A . n A 1 157 GLY 157 156 156 GLY GLY A . n A 1 158 ALA 158 157 157 ALA ALA A . n A 1 159 MSE 159 158 158 MSE MSE A . n A 1 160 TYR 160 159 159 TYR TYR A . n A 1 161 LEU 161 160 160 LEU LEU A . n A 1 162 ILE 162 161 161 ILE ILE A . n A 1 163 GLU 163 162 162 GLU GLU A . n A 1 164 LEU 164 163 163 LEU LEU A . n A 1 165 GLY 165 164 164 GLY GLY A . n A 1 166 THR 166 165 165 THR THR A . n A 1 167 GLY 167 166 166 GLY GLY A . n A 1 168 CYS 168 167 167 CYS CYS A . n A 1 169 ILE 169 168 168 ILE ILE A . n A 1 170 ASP 170 169 169 ASP ASP A . n A 1 171 PHE 171 170 170 PHE PHE A . n A 1 172 PHE 172 171 171 PHE PHE A . n A 1 173 ASN 173 172 172 ASN ASN A . n A 1 174 SER 174 173 173 SER SER A . n A 1 175 LEU 175 174 174 LEU LEU A . n A 1 176 LEU 176 175 175 LEU LEU A . n A 1 177 GLU 177 176 176 GLU GLU A . n A 1 178 LYS 178 177 177 LYS LYS A . n A 1 179 TYR 179 178 178 TYR TYR A . n A 1 180 GLY 180 179 179 GLY GLY A . n A 1 181 GLN 181 180 180 GLN GLN A . n A 1 182 LEU 182 181 181 LEU LEU A . n A 1 183 PRO 183 182 182 PRO PRO A . n A 1 184 TYR 184 183 183 TYR TYR A . n A 1 185 GLU 185 184 184 GLU GLU A . n A 1 186 LEU 186 185 185 LEU LEU A . n A 1 187 LEU 187 186 186 LEU LEU A . n A 1 188 LEU 188 187 187 LEU LEU A . n A 1 189 VAL 189 188 188 VAL VAL A . n A 1 190 MSE 190 189 189 MSE MSE A . n A 1 191 GLU 191 190 190 GLU GLU A . n A 1 192 HIS 192 191 191 HIS HIS A . n A 1 193 GLY 193 192 192 GLY GLY A . n A 1 194 ILE 194 193 193 ILE ILE A . n A 1 195 ARG 195 194 194 ARG ARG A . n A 1 196 PRO 196 195 195 PRO PRO A . n A 1 197 GLY 197 196 196 GLY GLY A . n A 1 198 ILE 198 197 197 ILE ILE A . n A 1 199 PHE 199 198 198 PHE PHE A . n A 1 200 THR 200 199 199 THR THR A . n A 1 201 ALA 201 200 200 ALA ALA A . n A 1 202 GLU 202 201 201 GLU GLU A . n A 1 203 ASP 203 202 202 ASP ASP A . n A 1 204 ILE 204 203 203 ILE ILE A . n A 1 205 GLU 205 204 204 GLU GLU A . n A 1 206 LEU 206 205 205 LEU LEU A . n A 1 207 TYR 207 206 206 TYR TYR A . n A 1 208 PHE 208 207 207 PHE PHE A . n A 1 209 PRO 209 208 208 PRO PRO A . n A 1 210 ASP 210 209 209 ASP ASP A . n A 1 211 PHE 211 210 210 PHE PHE A . n A 1 212 GLU 212 211 211 GLU GLU A . n A 1 213 ILE 213 212 212 ILE ILE A . n A 1 214 LEU 214 213 213 LEU LEU A . n A 1 215 SER 215 214 214 SER SER A . n A 1 216 GLN 216 215 215 GLN GLN A . n A 1 217 GLY 217 216 216 GLY GLY A . n A 1 218 GLU 218 217 217 GLU GLU A . n A 1 219 GLY 219 218 218 GLY GLY A . n A 1 220 LEU 220 219 219 LEU LEU A . n A 1 221 PHE 221 220 220 PHE PHE A . n A 1 222 GLN 222 221 221 GLN GLN A . n A 1 223 SER 223 222 222 SER SER A . n A 1 224 ILE 224 223 223 ILE ILE A . n A 1 225 HIS 225 224 224 HIS HIS A . n A 1 226 LYS 226 225 225 LYS LYS A . n A 1 227 LEU 227 226 226 LEU LEU A . n A 1 228 PRO 228 227 227 PRO PRO A . n A 1 229 ASP 229 228 228 ASP ASP A . n A 1 230 GLY 230 229 229 GLY GLY A . n A 1 231 ASN 231 230 230 ASN ASN A . n A 1 232 TYR 232 231 231 TYR TYR A . n A 1 233 ALA 233 232 232 ALA ALA A . n A 1 234 THR 234 233 233 THR THR A . n A 1 235 PRO 235 234 234 PRO PRO A . n A 1 236 PRO 236 235 235 PRO PRO A . n A 1 237 ALA 237 236 236 ALA ALA A . n A 1 238 PHE 238 237 237 PHE PHE A . n A 1 239 TRP 239 238 238 TRP TRP A . n A 1 240 ALA 240 239 239 ALA ALA A . n A 1 241 VAL 241 240 240 VAL VAL A . n A 1 242 ILE 242 241 241 ILE ILE A . n A 1 243 LYS 243 242 242 LYS LYS A . n A 1 244 HIS 244 243 243 HIS HIS A . n A 1 245 ARG 245 244 244 ARG ARG A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UNL 1 245 1 UNL UNL A . C 3 CO 1 246 2 CO CO A . D 4 CL 1 247 3 CL CL A . E 5 SAH 1 248 4 SAH SAH A . F 6 IMD 1 249 5 IMD IMD A . G 7 SO4 1 250 6 SO4 SO4 A . H 7 SO4 1 251 7 SO4 SO4 A . I 7 SO4 1 252 8 SO4 SO4 A . J 7 SO4 1 253 9 SO4 SO4 A . K 8 EDO 1 254 10 EDO EDO A . L 8 EDO 1 255 11 EDO EDO A . M 8 EDO 1 256 12 EDO EDO A . N 8 EDO 1 257 13 EDO EDO A . O 8 EDO 1 258 14 EDO EDO A . P 8 EDO 1 259 15 EDO EDO A . Q 8 EDO 1 260 16 EDO EDO A . R 8 EDO 1 261 17 EDO EDO A . S 8 EDO 1 262 18 EDO EDO A . T 9 HOH 1 263 19 HOH HOH A . T 9 HOH 2 264 20 HOH HOH A . T 9 HOH 3 265 21 HOH HOH A . T 9 HOH 4 266 22 HOH HOH A . T 9 HOH 5 267 23 HOH HOH A . T 9 HOH 6 268 24 HOH HOH A . T 9 HOH 7 269 25 HOH HOH A . T 9 HOH 8 270 26 HOH HOH A . T 9 HOH 9 271 27 HOH HOH A . T 9 HOH 10 272 28 HOH HOH A . T 9 HOH 11 273 29 HOH HOH A . T 9 HOH 12 274 30 HOH HOH A . T 9 HOH 13 275 31 HOH HOH A . T 9 HOH 14 276 32 HOH HOH A . T 9 HOH 15 277 33 HOH HOH A . T 9 HOH 16 278 34 HOH HOH A . T 9 HOH 17 279 35 HOH HOH A . T 9 HOH 18 280 36 HOH HOH A . T 9 HOH 19 281 37 HOH HOH A . T 9 HOH 20 282 38 HOH HOH A . T 9 HOH 21 283 39 HOH HOH A . T 9 HOH 22 284 40 HOH HOH A . T 9 HOH 23 285 41 HOH HOH A . T 9 HOH 24 286 42 HOH HOH A . T 9 HOH 25 287 43 HOH HOH A . T 9 HOH 26 288 44 HOH HOH A . T 9 HOH 27 289 45 HOH HOH A . T 9 HOH 28 290 46 HOH HOH A . T 9 HOH 29 291 47 HOH HOH A . T 9 HOH 30 292 48 HOH HOH A . T 9 HOH 31 293 49 HOH HOH A . T 9 HOH 32 294 50 HOH HOH A . T 9 HOH 33 295 51 HOH HOH A . T 9 HOH 34 296 52 HOH HOH A . T 9 HOH 35 297 53 HOH HOH A . T 9 HOH 36 298 54 HOH HOH A . T 9 HOH 37 299 55 HOH HOH A . T 9 HOH 38 300 56 HOH HOH A . T 9 HOH 39 301 57 HOH HOH A . T 9 HOH 40 302 58 HOH HOH A . T 9 HOH 41 303 59 HOH HOH A . T 9 HOH 42 304 60 HOH HOH A . T 9 HOH 43 305 61 HOH HOH A . T 9 HOH 44 306 62 HOH HOH A . T 9 HOH 45 307 63 HOH HOH A . T 9 HOH 46 308 64 HOH HOH A . T 9 HOH 47 309 65 HOH HOH A . T 9 HOH 48 310 66 HOH HOH A . T 9 HOH 49 311 67 HOH HOH A . T 9 HOH 50 312 68 HOH HOH A . T 9 HOH 51 313 69 HOH HOH A . T 9 HOH 52 314 70 HOH HOH A . T 9 HOH 53 315 71 HOH HOH A . T 9 HOH 54 316 72 HOH HOH A . T 9 HOH 55 317 73 HOH HOH A . T 9 HOH 56 318 74 HOH HOH A . T 9 HOH 57 319 75 HOH HOH A . T 9 HOH 58 320 76 HOH HOH A . T 9 HOH 59 321 77 HOH HOH A . T 9 HOH 60 322 78 HOH HOH A . T 9 HOH 61 323 79 HOH HOH A . T 9 HOH 62 324 80 HOH HOH A . T 9 HOH 63 325 81 HOH HOH A . T 9 HOH 64 326 82 HOH HOH A . T 9 HOH 65 327 83 HOH HOH A . T 9 HOH 66 328 84 HOH HOH A . T 9 HOH 67 329 85 HOH HOH A . T 9 HOH 68 330 86 HOH HOH A . T 9 HOH 69 331 87 HOH HOH A . T 9 HOH 70 332 88 HOH HOH A . T 9 HOH 71 333 89 HOH HOH A . T 9 HOH 72 334 90 HOH HOH A . T 9 HOH 73 335 91 HOH HOH A . T 9 HOH 74 336 92 HOH HOH A . T 9 HOH 75 337 93 HOH HOH A . T 9 HOH 76 338 94 HOH HOH A . T 9 HOH 77 339 95 HOH HOH A . T 9 HOH 78 340 96 HOH HOH A . T 9 HOH 79 341 97 HOH HOH A . T 9 HOH 80 342 98 HOH HOH A . T 9 HOH 81 343 99 HOH HOH A . T 9 HOH 82 344 100 HOH HOH A . T 9 HOH 83 345 101 HOH HOH A . T 9 HOH 84 346 102 HOH HOH A . T 9 HOH 85 347 103 HOH HOH A . T 9 HOH 86 348 104 HOH HOH A . T 9 HOH 87 349 105 HOH HOH A . T 9 HOH 88 350 106 HOH HOH A . T 9 HOH 89 351 107 HOH HOH A . T 9 HOH 90 352 108 HOH HOH A . T 9 HOH 91 353 109 HOH HOH A . T 9 HOH 92 354 110 HOH HOH A . T 9 HOH 93 355 111 HOH HOH A . T 9 HOH 94 356 112 HOH HOH A . T 9 HOH 95 357 113 HOH HOH A . T 9 HOH 96 358 114 HOH HOH A . T 9 HOH 97 359 115 HOH HOH A . T 9 HOH 98 360 116 HOH HOH A . T 9 HOH 99 361 117 HOH HOH A . T 9 HOH 100 362 118 HOH HOH A . T 9 HOH 101 363 119 HOH HOH A . T 9 HOH 102 364 120 HOH HOH A . T 9 HOH 103 365 121 HOH HOH A . T 9 HOH 104 366 122 HOH HOH A . T 9 HOH 105 367 123 HOH HOH A . T 9 HOH 106 368 124 HOH HOH A . T 9 HOH 107 369 125 HOH HOH A . T 9 HOH 108 370 126 HOH HOH A . T 9 HOH 109 371 127 HOH HOH A . T 9 HOH 110 372 128 HOH HOH A . T 9 HOH 111 373 129 HOH HOH A . T 9 HOH 112 374 130 HOH HOH A . T 9 HOH 113 375 131 HOH HOH A . T 9 HOH 114 376 132 HOH HOH A . T 9 HOH 115 377 133 HOH HOH A . T 9 HOH 116 378 134 HOH HOH A . T 9 HOH 117 379 135 HOH HOH A . T 9 HOH 118 380 136 HOH HOH A . T 9 HOH 119 381 137 HOH HOH A . T 9 HOH 120 382 138 HOH HOH A . T 9 HOH 121 383 139 HOH HOH A . T 9 HOH 122 384 140 HOH HOH A . T 9 HOH 123 385 141 HOH HOH A . T 9 HOH 124 386 142 HOH HOH A . T 9 HOH 125 387 143 HOH HOH A . T 9 HOH 126 388 144 HOH HOH A . T 9 HOH 127 389 145 HOH HOH A . T 9 HOH 128 390 146 HOH HOH A . T 9 HOH 129 391 147 HOH HOH A . T 9 HOH 130 392 148 HOH HOH A . T 9 HOH 131 393 149 HOH HOH A . T 9 HOH 132 394 150 HOH HOH A . T 9 HOH 133 395 151 HOH HOH A . T 9 HOH 134 396 152 HOH HOH A . T 9 HOH 135 397 153 HOH HOH A . T 9 HOH 136 398 154 HOH HOH A . T 9 HOH 137 399 155 HOH HOH A . T 9 HOH 138 400 156 HOH HOH A . T 9 HOH 139 401 157 HOH HOH A . T 9 HOH 140 402 158 HOH HOH A . T 9 HOH 141 403 159 HOH HOH A . T 9 HOH 142 404 160 HOH HOH A . T 9 HOH 143 405 161 HOH HOH A . T 9 HOH 144 406 162 HOH HOH A . T 9 HOH 145 407 163 HOH HOH A . T 9 HOH 146 408 164 HOH HOH A . T 9 HOH 147 409 165 HOH HOH A . T 9 HOH 148 410 166 HOH HOH A . T 9 HOH 149 411 167 HOH HOH A . T 9 HOH 150 412 168 HOH HOH A . T 9 HOH 151 413 169 HOH HOH A . T 9 HOH 152 414 170 HOH HOH A . T 9 HOH 153 415 171 HOH HOH A . T 9 HOH 154 416 172 HOH HOH A . T 9 HOH 155 417 173 HOH HOH A . T 9 HOH 156 418 174 HOH HOH A . T 9 HOH 157 419 175 HOH HOH A . T 9 HOH 158 420 176 HOH HOH A . T 9 HOH 159 421 177 HOH HOH A . T 9 HOH 160 422 178 HOH HOH A . T 9 HOH 161 423 179 HOH HOH A . T 9 HOH 162 424 180 HOH HOH A . T 9 HOH 163 425 181 HOH HOH A . T 9 HOH 164 426 182 HOH HOH A . T 9 HOH 165 427 183 HOH HOH A . T 9 HOH 166 428 184 HOH HOH A . T 9 HOH 167 429 185 HOH HOH A . T 9 HOH 168 430 186 HOH HOH A . T 9 HOH 169 431 187 HOH HOH A . T 9 HOH 170 432 188 HOH HOH A . T 9 HOH 171 433 189 HOH HOH A . T 9 HOH 172 434 190 HOH HOH A . T 9 HOH 173 435 191 HOH HOH A . T 9 HOH 174 436 192 HOH HOH A . T 9 HOH 175 437 193 HOH HOH A . T 9 HOH 176 438 194 HOH HOH A . T 9 HOH 177 439 195 HOH HOH A . T 9 HOH 178 440 196 HOH HOH A . T 9 HOH 179 441 197 HOH HOH A . T 9 HOH 180 442 198 HOH HOH A . T 9 HOH 181 443 199 HOH HOH A . T 9 HOH 182 444 200 HOH HOH A . T 9 HOH 183 445 201 HOH HOH A . T 9 HOH 184 446 202 HOH HOH A . T 9 HOH 185 447 203 HOH HOH A . T 9 HOH 186 448 204 HOH HOH A . T 9 HOH 187 449 205 HOH HOH A . T 9 HOH 188 450 206 HOH HOH A . T 9 HOH 189 451 207 HOH HOH A . T 9 HOH 190 452 208 HOH HOH A . T 9 HOH 191 453 209 HOH HOH A . T 9 HOH 192 454 210 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 130 A MSE 129 ? MET SELENOMETHIONINE 2 A MSE 159 A MSE 158 ? MET SELENOMETHIONINE 3 A MSE 190 A MSE 189 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 210 ? A ASP 209 ? 1_555 CO ? C CO . ? A CO 246 ? 1_555 NE2 ? A HIS 244 ? A HIS 243 ? 1_555 109.7 ? 2 OD2 ? A ASP 210 ? A ASP 209 ? 1_555 CO ? C CO . ? A CO 246 ? 1_555 N1 ? F IMD . ? A IMD 249 ? 1_555 109.5 ? 3 NE2 ? A HIS 244 ? A HIS 243 ? 1_555 CO ? C CO . ? A CO 246 ? 1_555 N1 ? F IMD . ? A IMD 249 ? 1_555 110.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-03-31 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Author supporting evidence' 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_struct_assembly_auth_evidence 2 3 'Structure model' software 3 4 'Structure model' software 4 4 'Structure model' struct_conn 5 5 'Structure model' database_2 6 5 'Structure model' struct_ref_seq_dif 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 12.5878 _pdbx_refine_tls.origin_y 41.0960 _pdbx_refine_tls.origin_z 7.2816 _pdbx_refine_tls.T[1][1] -0.1710 _pdbx_refine_tls.T[2][2] -0.1496 _pdbx_refine_tls.T[3][3] -0.1760 _pdbx_refine_tls.T[1][2] 0.0016 _pdbx_refine_tls.T[1][3] -0.0059 _pdbx_refine_tls.T[2][3] 0.0114 _pdbx_refine_tls.L[1][1] 1.7105 _pdbx_refine_tls.L[2][2] 1.9002 _pdbx_refine_tls.L[3][3] 1.4240 _pdbx_refine_tls.L[1][2] -0.0314 _pdbx_refine_tls.L[1][3] -0.3779 _pdbx_refine_tls.L[2][3] 0.8043 _pdbx_refine_tls.S[1][1] -0.0058 _pdbx_refine_tls.S[2][2] -0.0809 _pdbx_refine_tls.S[3][3] 0.0867 _pdbx_refine_tls.S[1][2] -0.0891 _pdbx_refine_tls.S[1][3] -0.2023 _pdbx_refine_tls.S[2][3] -0.0527 _pdbx_refine_tls.S[2][1] 0.0267 _pdbx_refine_tls.S[3][1] 0.0870 _pdbx_refine_tls.S[3][2] -0.0175 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.beg_auth_seq_id 2 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 244 _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 5 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 SHELXD . ? ? ? ? phasing ? ? ? 8 autoSHARP . ? ? ? ? phasing ? ? ? 9 # _pdbx_entry_details.entry_id 3GGD _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CZ _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 TYR _pdbx_validate_rmsd_bond.auth_seq_id_1 183 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OH _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 TYR _pdbx_validate_rmsd_bond.auth_seq_id_2 183 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.477 _pdbx_validate_rmsd_bond.bond_target_value 1.374 _pdbx_validate_rmsd_bond.bond_deviation 0.103 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.017 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 7 ? ? -85.97 -72.98 2 1 ALA A 41 ? ? -127.86 -104.15 3 1 ASN A 97 ? ? -140.53 48.78 4 1 GLU A 217 ? ? -124.15 -98.79 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 2 ? CG ? A GLU 3 CG 2 1 Y 1 A GLU 2 ? CD ? A GLU 3 CD 3 1 Y 1 A GLU 2 ? OE1 ? A GLU 3 OE1 4 1 Y 1 A GLU 2 ? OE2 ? A GLU 3 OE2 5 1 Y 1 A LYS 3 ? NZ ? A LYS 4 NZ 6 1 Y 1 A ILE 7 ? CG1 ? A ILE 8 CG1 7 1 Y 1 A ILE 7 ? CG2 ? A ILE 8 CG2 8 1 Y 1 A ILE 7 ? CD1 ? A ILE 8 CD1 9 1 Y 1 A LYS 8 ? CG ? A LYS 9 CG 10 1 Y 1 A LYS 8 ? CD ? A LYS 9 CD 11 1 Y 1 A LYS 8 ? CE ? A LYS 9 CE 12 1 Y 1 A LYS 8 ? NZ ? A LYS 9 NZ 13 1 Y 1 A GLU 56 ? CG ? A GLU 57 CG 14 1 Y 1 A GLU 56 ? CD ? A GLU 57 CD 15 1 Y 1 A GLU 56 ? OE1 ? A GLU 57 OE1 16 1 Y 1 A GLU 56 ? OE2 ? A GLU 57 OE2 17 1 Y 1 A LYS 95 ? CE ? A LYS 96 CE 18 1 Y 1 A LYS 95 ? NZ ? A LYS 96 NZ 19 1 Y 1 A GLU 113 ? CD ? A GLU 114 CD 20 1 Y 1 A GLU 113 ? OE1 ? A GLU 114 OE1 21 1 Y 1 A GLU 113 ? OE2 ? A GLU 114 OE2 22 1 Y 1 A GLU 176 ? CD ? A GLU 177 CD 23 1 Y 1 A GLU 176 ? OE1 ? A GLU 177 OE1 24 1 Y 1 A GLU 176 ? OE2 ? A GLU 177 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A MSE 1 ? A MSE 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'UNKNOWN LIGAND' UNL 3 'COBALT (II) ION' CO 4 'CHLORIDE ION' CL 5 S-ADENOSYL-L-HOMOCYSTEINE SAH 6 IMIDAZOLE IMD 7 'SULFATE ION' SO4 8 1,2-ETHANEDIOL EDO 9 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #