data_3GH9 # _entry.id 3GH9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3GH9 pdb_00003gh9 10.2210/pdb3gh9/pdb RCSB RCSB051857 ? ? WWPDB D_1000051857 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-06-16 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-11-01 4 'Structure model' 1 3 2024-11-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' 6 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site 7 4 'Structure model' pdbx_entry_details 8 4 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3GH9 _pdbx_database_status.recvd_initial_deposition_date 2009-03-03 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3EU3 'Reduced BdbD' unspecified PDB 3EU4 'Oxidised BdbD' unspecified PDB 3GHA 'ETDA-treated BdbD (Reduced)' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Crow, A.' 1 'Lewin, A.' 2 'Hederstedt, L.' 3 'Le-Brun, N.E.' 4 # _citation.id primary _citation.title ;Crystal Structure and Biophysical Properties of Bacillus subtilis BdbD: AN OXIDIZING THIOL:DISULFIDE OXIDOREDUCTASE CONTAINING A NOVEL METAL SITE ; _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 284 _citation.page_first 23719 _citation.page_last 23733 _citation.year 2009 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19535335 _citation.pdbx_database_id_DOI 10.1074/jbc.M109.005785 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Crow, A.' 1 ? primary 'Lewin, A.' 2 ? primary 'Hecht, O.' 3 ? primary 'Carlsson Moller, M.' 4 ? primary 'Moore, G.R.' 5 ? primary 'Hederstedt, L.' 6 ? primary 'Le Brun, N.E.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Disulfide bond formation protein D' 23043.812 1 ? ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 3 non-polymer syn 'UNKNOWN ATOM OR ION' ? 1 ? ? ? ? 4 water nat water 18.015 142 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Disulfide oxidoreductase D, Thiol-disulfide oxidoreductase D' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MNNKTEQGNDAVSGQPSIKGQPVLGKDDAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVMFHGKGSR LAALASEEVWKEDPDSFWDFHEKLFEKQPDTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETFASQVEKDSDLNQKMN IQATPTIYVNDKVIKNFADYDEIKETIEKELKGKLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MNNKTEQGNDAVSGQPSIKGQPVLGKDDAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVMFHGKGSR LAALASEEVWKEDPDSFWDFHEKLFEKQPDTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETFASQVEKDSDLNQKMN IQATPTIYVNDKVIKNFADYDEIKETIEKELKGKLEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 'UNKNOWN ATOM OR ION' UNX 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASN n 1 3 ASN n 1 4 LYS n 1 5 THR n 1 6 GLU n 1 7 GLN n 1 8 GLY n 1 9 ASN n 1 10 ASP n 1 11 ALA n 1 12 VAL n 1 13 SER n 1 14 GLY n 1 15 GLN n 1 16 PRO n 1 17 SER n 1 18 ILE n 1 19 LYS n 1 20 GLY n 1 21 GLN n 1 22 PRO n 1 23 VAL n 1 24 LEU n 1 25 GLY n 1 26 LYS n 1 27 ASP n 1 28 ASP n 1 29 ALA n 1 30 PRO n 1 31 VAL n 1 32 THR n 1 33 VAL n 1 34 VAL n 1 35 GLU n 1 36 PHE n 1 37 GLY n 1 38 ASP n 1 39 TYR n 1 40 LYS n 1 41 CYS n 1 42 PRO n 1 43 SER n 1 44 CYS n 1 45 LYS n 1 46 VAL n 1 47 PHE n 1 48 ASN n 1 49 SER n 1 50 ASP n 1 51 ILE n 1 52 PHE n 1 53 PRO n 1 54 LYS n 1 55 ILE n 1 56 GLN n 1 57 LYS n 1 58 ASP n 1 59 PHE n 1 60 ILE n 1 61 ASP n 1 62 LYS n 1 63 GLY n 1 64 ASP n 1 65 VAL n 1 66 LYS n 1 67 PHE n 1 68 SER n 1 69 PHE n 1 70 VAL n 1 71 ASN n 1 72 VAL n 1 73 MET n 1 74 PHE n 1 75 HIS n 1 76 GLY n 1 77 LYS n 1 78 GLY n 1 79 SER n 1 80 ARG n 1 81 LEU n 1 82 ALA n 1 83 ALA n 1 84 LEU n 1 85 ALA n 1 86 SER n 1 87 GLU n 1 88 GLU n 1 89 VAL n 1 90 TRP n 1 91 LYS n 1 92 GLU n 1 93 ASP n 1 94 PRO n 1 95 ASP n 1 96 SER n 1 97 PHE n 1 98 TRP n 1 99 ASP n 1 100 PHE n 1 101 HIS n 1 102 GLU n 1 103 LYS n 1 104 LEU n 1 105 PHE n 1 106 GLU n 1 107 LYS n 1 108 GLN n 1 109 PRO n 1 110 ASP n 1 111 THR n 1 112 GLU n 1 113 GLN n 1 114 GLU n 1 115 TRP n 1 116 VAL n 1 117 THR n 1 118 PRO n 1 119 GLY n 1 120 LEU n 1 121 LEU n 1 122 GLY n 1 123 ASP n 1 124 LEU n 1 125 ALA n 1 126 LYS n 1 127 SER n 1 128 THR n 1 129 THR n 1 130 LYS n 1 131 ILE n 1 132 LYS n 1 133 PRO n 1 134 GLU n 1 135 THR n 1 136 LEU n 1 137 LYS n 1 138 GLU n 1 139 ASN n 1 140 LEU n 1 141 ASP n 1 142 LYS n 1 143 GLU n 1 144 THR n 1 145 PHE n 1 146 ALA n 1 147 SER n 1 148 GLN n 1 149 VAL n 1 150 GLU n 1 151 LYS n 1 152 ASP n 1 153 SER n 1 154 ASP n 1 155 LEU n 1 156 ASN n 1 157 GLN n 1 158 LYS n 1 159 MET n 1 160 ASN n 1 161 ILE n 1 162 GLN n 1 163 ALA n 1 164 THR n 1 165 PRO n 1 166 THR n 1 167 ILE n 1 168 TYR n 1 169 VAL n 1 170 ASN n 1 171 ASP n 1 172 LYS n 1 173 VAL n 1 174 ILE n 1 175 LYS n 1 176 ASN n 1 177 PHE n 1 178 ALA n 1 179 ASP n 1 180 TYR n 1 181 ASP n 1 182 GLU n 1 183 ILE n 1 184 LYS n 1 185 GLU n 1 186 THR n 1 187 ILE n 1 188 GLU n 1 189 LYS n 1 190 GLU n 1 191 LEU n 1 192 LYS n 1 193 GLY n 1 194 LYS n 1 195 LEU n 1 196 GLU n 1 197 HIS n 1 198 HIS n 1 199 HIS n 1 200 HIS n 1 201 HIS n 1 202 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'bdbD, BSU33480, yvgV' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 1A1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus subtilis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1423 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET21a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 29 ? ? ? A . n A 1 2 ASN 2 30 ? ? ? A . n A 1 3 ASN 3 31 ? ? ? A . n A 1 4 LYS 4 32 ? ? ? A . n A 1 5 THR 5 33 ? ? ? A . n A 1 6 GLU 6 34 ? ? ? A . n A 1 7 GLN 7 35 ? ? ? A . n A 1 8 GLY 8 36 ? ? ? A . n A 1 9 ASN 9 37 37 ASN ASN A . n A 1 10 ASP 10 38 38 ASP ASP A . n A 1 11 ALA 11 39 39 ALA ALA A . n A 1 12 VAL 12 40 40 VAL VAL A . n A 1 13 SER 13 41 41 SER SER A . n A 1 14 GLY 14 42 42 GLY GLY A . n A 1 15 GLN 15 43 43 GLN GLN A . n A 1 16 PRO 16 44 44 PRO PRO A . n A 1 17 SER 17 45 45 SER SER A . n A 1 18 ILE 18 46 46 ILE ILE A . n A 1 19 LYS 19 47 47 LYS LYS A . n A 1 20 GLY 20 48 48 GLY GLY A . n A 1 21 GLN 21 49 49 GLN GLN A . n A 1 22 PRO 22 50 50 PRO PRO A . n A 1 23 VAL 23 51 51 VAL VAL A . n A 1 24 LEU 24 52 52 LEU LEU A . n A 1 25 GLY 25 53 53 GLY GLY A . n A 1 26 LYS 26 54 54 LYS LYS A . n A 1 27 ASP 27 55 55 ASP ASP A . n A 1 28 ASP 28 56 56 ASP ASP A . n A 1 29 ALA 29 57 57 ALA ALA A . n A 1 30 PRO 30 58 58 PRO PRO A . n A 1 31 VAL 31 59 59 VAL VAL A . n A 1 32 THR 32 60 60 THR THR A . n A 1 33 VAL 33 61 61 VAL VAL A . n A 1 34 VAL 34 62 62 VAL VAL A . n A 1 35 GLU 35 63 63 GLU GLU A . n A 1 36 PHE 36 64 64 PHE PHE A . n A 1 37 GLY 37 65 65 GLY GLY A . n A 1 38 ASP 38 66 66 ASP ASP A . n A 1 39 TYR 39 67 67 TYR TYR A . n A 1 40 LYS 40 68 68 LYS LYS A . n A 1 41 CYS 41 69 69 CYS CYS A . n A 1 42 PRO 42 70 70 PRO PRO A . n A 1 43 SER 43 71 71 SER SER A . n A 1 44 CYS 44 72 72 CYS CYS A . n A 1 45 LYS 45 73 73 LYS LYS A . n A 1 46 VAL 46 74 74 VAL VAL A . n A 1 47 PHE 47 75 75 PHE PHE A . n A 1 48 ASN 48 76 76 ASN ASN A . n A 1 49 SER 49 77 77 SER SER A . n A 1 50 ASP 50 78 78 ASP ASP A . n A 1 51 ILE 51 79 79 ILE ILE A . n A 1 52 PHE 52 80 80 PHE PHE A . n A 1 53 PRO 53 81 81 PRO PRO A . n A 1 54 LYS 54 82 82 LYS LYS A . n A 1 55 ILE 55 83 83 ILE ILE A . n A 1 56 GLN 56 84 84 GLN GLN A . n A 1 57 LYS 57 85 85 LYS LYS A . n A 1 58 ASP 58 86 86 ASP ASP A . n A 1 59 PHE 59 87 87 PHE PHE A . n A 1 60 ILE 60 88 88 ILE ILE A . n A 1 61 ASP 61 89 89 ASP ASP A . n A 1 62 LYS 62 90 90 LYS LYS A . n A 1 63 GLY 63 91 91 GLY GLY A . n A 1 64 ASP 64 92 92 ASP ASP A . n A 1 65 VAL 65 93 93 VAL VAL A . n A 1 66 LYS 66 94 94 LYS LYS A . n A 1 67 PHE 67 95 95 PHE PHE A . n A 1 68 SER 68 96 96 SER SER A . n A 1 69 PHE 69 97 97 PHE PHE A . n A 1 70 VAL 70 98 98 VAL VAL A . n A 1 71 ASN 71 99 99 ASN ASN A . n A 1 72 VAL 72 100 100 VAL VAL A . n A 1 73 MET 73 101 101 MET MET A . n A 1 74 PHE 74 102 102 PHE PHE A . n A 1 75 HIS 75 103 103 HIS HIS A . n A 1 76 GLY 76 104 104 GLY GLY A . n A 1 77 LYS 77 105 105 LYS LYS A . n A 1 78 GLY 78 106 106 GLY GLY A . n A 1 79 SER 79 107 107 SER SER A . n A 1 80 ARG 80 108 108 ARG ARG A . n A 1 81 LEU 81 109 109 LEU LEU A . n A 1 82 ALA 82 110 110 ALA ALA A . n A 1 83 ALA 83 111 111 ALA ALA A . n A 1 84 LEU 84 112 112 LEU LEU A . n A 1 85 ALA 85 113 113 ALA ALA A . n A 1 86 SER 86 114 114 SER SER A . n A 1 87 GLU 87 115 115 GLU GLU A . n A 1 88 GLU 88 116 116 GLU GLU A . n A 1 89 VAL 89 117 117 VAL VAL A . n A 1 90 TRP 90 118 118 TRP TRP A . n A 1 91 LYS 91 119 119 LYS LYS A . n A 1 92 GLU 92 120 120 GLU GLU A . n A 1 93 ASP 93 121 121 ASP ASP A . n A 1 94 PRO 94 122 122 PRO PRO A . n A 1 95 ASP 95 123 123 ASP ASP A . n A 1 96 SER 96 124 124 SER SER A . n A 1 97 PHE 97 125 125 PHE PHE A . n A 1 98 TRP 98 126 126 TRP TRP A . n A 1 99 ASP 99 127 127 ASP ASP A . n A 1 100 PHE 100 128 128 PHE PHE A . n A 1 101 HIS 101 129 129 HIS HIS A . n A 1 102 GLU 102 130 130 GLU GLU A . n A 1 103 LYS 103 131 131 LYS LYS A . n A 1 104 LEU 104 132 132 LEU LEU A . n A 1 105 PHE 105 133 133 PHE PHE A . n A 1 106 GLU 106 134 134 GLU GLU A . n A 1 107 LYS 107 135 135 LYS LYS A . n A 1 108 GLN 108 136 136 GLN GLN A . n A 1 109 PRO 109 137 137 PRO PRO A . n A 1 110 ASP 110 138 138 ASP ASP A . n A 1 111 THR 111 139 139 THR THR A . n A 1 112 GLU 112 140 140 GLU GLU A . n A 1 113 GLN 113 141 141 GLN GLN A . n A 1 114 GLU 114 142 142 GLU GLU A . n A 1 115 TRP 115 143 143 TRP TRP A . n A 1 116 VAL 116 144 144 VAL VAL A . n A 1 117 THR 117 145 145 THR THR A . n A 1 118 PRO 118 146 146 PRO PRO A . n A 1 119 GLY 119 147 147 GLY GLY A . n A 1 120 LEU 120 148 148 LEU LEU A . n A 1 121 LEU 121 149 149 LEU LEU A . n A 1 122 GLY 122 150 150 GLY GLY A . n A 1 123 ASP 123 151 151 ASP ASP A . n A 1 124 LEU 124 152 152 LEU LEU A . n A 1 125 ALA 125 153 153 ALA ALA A . n A 1 126 LYS 126 154 154 LYS LYS A . n A 1 127 SER 127 155 155 SER SER A . n A 1 128 THR 128 156 156 THR THR A . n A 1 129 THR 129 157 157 THR THR A . n A 1 130 LYS 130 158 158 LYS LYS A . n A 1 131 ILE 131 159 159 ILE ILE A . n A 1 132 LYS 132 160 160 LYS LYS A . n A 1 133 PRO 133 161 161 PRO PRO A . n A 1 134 GLU 134 162 162 GLU GLU A . n A 1 135 THR 135 163 163 THR THR A . n A 1 136 LEU 136 164 164 LEU LEU A . n A 1 137 LYS 137 165 165 LYS LYS A . n A 1 138 GLU 138 166 166 GLU GLU A . n A 1 139 ASN 139 167 167 ASN ASN A . n A 1 140 LEU 140 168 168 LEU LEU A . n A 1 141 ASP 141 169 169 ASP ASP A . n A 1 142 LYS 142 170 170 LYS LYS A . n A 1 143 GLU 143 171 171 GLU GLU A . n A 1 144 THR 144 172 172 THR THR A . n A 1 145 PHE 145 173 173 PHE PHE A . n A 1 146 ALA 146 174 174 ALA ALA A . n A 1 147 SER 147 175 175 SER SER A . n A 1 148 GLN 148 176 176 GLN GLN A . n A 1 149 VAL 149 177 177 VAL VAL A . n A 1 150 GLU 150 178 178 GLU GLU A . n A 1 151 LYS 151 179 179 LYS LYS A . n A 1 152 ASP 152 180 180 ASP ASP A . n A 1 153 SER 153 181 181 SER SER A . n A 1 154 ASP 154 182 182 ASP ASP A . n A 1 155 LEU 155 183 183 LEU LEU A . n A 1 156 ASN 156 184 184 ASN ASN A . n A 1 157 GLN 157 185 185 GLN GLN A . n A 1 158 LYS 158 186 186 LYS LYS A . n A 1 159 MET 159 187 187 MET MET A . n A 1 160 ASN 160 188 188 ASN ASN A . n A 1 161 ILE 161 189 189 ILE ILE A . n A 1 162 GLN 162 190 190 GLN GLN A . n A 1 163 ALA 163 191 191 ALA ALA A . n A 1 164 THR 164 192 192 THR THR A . n A 1 165 PRO 165 193 193 PRO PRO A . n A 1 166 THR 166 194 194 THR THR A . n A 1 167 ILE 167 195 195 ILE ILE A . n A 1 168 TYR 168 196 196 TYR TYR A . n A 1 169 VAL 169 197 197 VAL VAL A . n A 1 170 ASN 170 198 198 ASN ASN A . n A 1 171 ASP 171 199 199 ASP ASP A . n A 1 172 LYS 172 200 200 LYS LYS A . n A 1 173 VAL 173 201 201 VAL VAL A . n A 1 174 ILE 174 202 202 ILE ILE A . n A 1 175 LYS 175 203 203 LYS LYS A . n A 1 176 ASN 176 204 204 ASN ASN A . n A 1 177 PHE 177 205 205 PHE PHE A . n A 1 178 ALA 178 206 206 ALA ALA A . n A 1 179 ASP 179 207 207 ASP ASP A . n A 1 180 TYR 180 208 208 TYR TYR A . n A 1 181 ASP 181 209 209 ASP ASP A . n A 1 182 GLU 182 210 210 GLU GLU A . n A 1 183 ILE 183 211 211 ILE ILE A . n A 1 184 LYS 184 212 212 LYS LYS A . n A 1 185 GLU 185 213 213 GLU GLU A . n A 1 186 THR 186 214 214 THR THR A . n A 1 187 ILE 187 215 215 ILE ILE A . n A 1 188 GLU 188 216 216 GLU GLU A . n A 1 189 LYS 189 217 217 LYS LYS A . n A 1 190 GLU 190 218 218 GLU GLU A . n A 1 191 LEU 191 219 219 LEU LEU A . n A 1 192 LYS 192 220 220 LYS LYS A . n A 1 193 GLY 193 221 221 GLY GLY A . n A 1 194 LYS 194 222 222 LYS LYS A . n A 1 195 LEU 195 223 ? ? ? A . n A 1 196 GLU 196 224 ? ? ? A . n A 1 197 HIS 197 225 ? ? ? A . n A 1 198 HIS 198 226 ? ? ? A . n A 1 199 HIS 199 227 ? ? ? A . n A 1 200 HIS 200 228 ? ? ? A . n A 1 201 HIS 201 229 ? ? ? A . n A 1 202 HIS 202 230 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO 1 301 301 EDO EDO A . C 3 UNX 1 1 1 UNX UNX A . D 4 HOH 1 2 2 HOH HOH A . D 4 HOH 2 3 3 HOH HOH A . D 4 HOH 3 4 4 HOH HOH A . D 4 HOH 4 5 5 HOH HOH A . D 4 HOH 5 6 6 HOH HOH A . D 4 HOH 6 7 7 HOH HOH A . D 4 HOH 7 8 8 HOH HOH A . D 4 HOH 8 9 9 HOH HOH A . D 4 HOH 9 10 10 HOH HOH A . D 4 HOH 10 11 11 HOH HOH A . D 4 HOH 11 12 12 HOH HOH A . D 4 HOH 12 13 13 HOH HOH A . D 4 HOH 13 14 14 HOH HOH A . D 4 HOH 14 15 15 HOH HOH A . D 4 HOH 15 16 16 HOH HOH A . D 4 HOH 16 17 17 HOH HOH A . D 4 HOH 17 18 18 HOH HOH A . D 4 HOH 18 19 19 HOH HOH A . D 4 HOH 19 20 20 HOH HOH A . D 4 HOH 20 21 21 HOH HOH A . D 4 HOH 21 22 22 HOH HOH A . D 4 HOH 22 23 23 HOH HOH A . D 4 HOH 23 24 24 HOH HOH A . D 4 HOH 24 25 25 HOH HOH A . D 4 HOH 25 26 26 HOH HOH A . D 4 HOH 26 27 27 HOH HOH A . D 4 HOH 27 28 28 HOH HOH A . D 4 HOH 28 231 1 HOH HOH A . D 4 HOH 29 232 29 HOH HOH A . D 4 HOH 30 233 30 HOH HOH A . D 4 HOH 31 234 31 HOH HOH A . D 4 HOH 32 235 32 HOH HOH A . D 4 HOH 33 236 33 HOH HOH A . D 4 HOH 34 237 34 HOH HOH A . D 4 HOH 35 238 35 HOH HOH A . D 4 HOH 36 239 36 HOH HOH A . D 4 HOH 37 240 37 HOH HOH A . D 4 HOH 38 241 38 HOH HOH A . D 4 HOH 39 242 39 HOH HOH A . D 4 HOH 40 243 40 HOH HOH A . D 4 HOH 41 244 41 HOH HOH A . D 4 HOH 42 245 42 HOH HOH A . D 4 HOH 43 246 43 HOH HOH A . D 4 HOH 44 247 44 HOH HOH A . D 4 HOH 45 248 45 HOH HOH A . D 4 HOH 46 249 46 HOH HOH A . D 4 HOH 47 250 47 HOH HOH A . D 4 HOH 48 251 48 HOH HOH A . D 4 HOH 49 252 49 HOH HOH A . D 4 HOH 50 253 50 HOH HOH A . D 4 HOH 51 254 51 HOH HOH A . D 4 HOH 52 255 52 HOH HOH A . D 4 HOH 53 256 53 HOH HOH A . D 4 HOH 54 257 54 HOH HOH A . D 4 HOH 55 258 55 HOH HOH A . D 4 HOH 56 259 56 HOH HOH A . D 4 HOH 57 260 57 HOH HOH A . D 4 HOH 58 261 58 HOH HOH A . D 4 HOH 59 262 59 HOH HOH A . D 4 HOH 60 263 60 HOH HOH A . D 4 HOH 61 264 61 HOH HOH A . D 4 HOH 62 265 62 HOH HOH A . D 4 HOH 63 266 63 HOH HOH A . D 4 HOH 64 267 64 HOH HOH A . D 4 HOH 65 268 65 HOH HOH A . D 4 HOH 66 269 66 HOH HOH A . D 4 HOH 67 270 67 HOH HOH A . D 4 HOH 68 271 68 HOH HOH A . D 4 HOH 69 272 69 HOH HOH A . D 4 HOH 70 273 70 HOH HOH A . D 4 HOH 71 274 71 HOH HOH A . D 4 HOH 72 275 72 HOH HOH A . D 4 HOH 73 276 73 HOH HOH A . D 4 HOH 74 277 74 HOH HOH A . D 4 HOH 75 278 75 HOH HOH A . D 4 HOH 76 279 76 HOH HOH A . D 4 HOH 77 280 77 HOH HOH A . D 4 HOH 78 281 78 HOH HOH A . D 4 HOH 79 282 79 HOH HOH A . D 4 HOH 80 283 80 HOH HOH A . D 4 HOH 81 284 81 HOH HOH A . D 4 HOH 82 285 82 HOH HOH A . D 4 HOH 83 286 83 HOH HOH A . D 4 HOH 84 287 84 HOH HOH A . D 4 HOH 85 288 85 HOH HOH A . D 4 HOH 86 289 86 HOH HOH A . D 4 HOH 87 290 87 HOH HOH A . D 4 HOH 88 291 88 HOH HOH A . D 4 HOH 89 292 89 HOH HOH A . D 4 HOH 90 293 90 HOH HOH A . D 4 HOH 91 294 91 HOH HOH A . D 4 HOH 92 295 92 HOH HOH A . D 4 HOH 93 296 93 HOH HOH A . D 4 HOH 94 297 94 HOH HOH A . D 4 HOH 95 298 95 HOH HOH A . D 4 HOH 96 299 96 HOH HOH A . D 4 HOH 97 300 97 HOH HOH A . D 4 HOH 98 302 98 HOH HOH A . D 4 HOH 99 303 99 HOH HOH A . D 4 HOH 100 304 100 HOH HOH A . D 4 HOH 101 305 101 HOH HOH A . D 4 HOH 102 306 102 HOH HOH A . D 4 HOH 103 307 103 HOH HOH A . D 4 HOH 104 308 104 HOH HOH A . D 4 HOH 105 309 105 HOH HOH A . D 4 HOH 106 310 106 HOH HOH A . D 4 HOH 107 311 107 HOH HOH A . D 4 HOH 108 312 108 HOH HOH A . D 4 HOH 109 313 109 HOH HOH A . D 4 HOH 110 314 110 HOH HOH A . D 4 HOH 111 315 111 HOH HOH A . D 4 HOH 112 316 112 HOH HOH A . D 4 HOH 113 317 113 HOH HOH A . D 4 HOH 114 318 114 HOH HOH A . D 4 HOH 115 319 115 HOH HOH A . D 4 HOH 116 320 116 HOH HOH A . D 4 HOH 117 321 117 HOH HOH A . D 4 HOH 118 322 118 HOH HOH A . D 4 HOH 119 323 119 HOH HOH A . D 4 HOH 120 324 120 HOH HOH A . D 4 HOH 121 325 121 HOH HOH A . D 4 HOH 122 326 122 HOH HOH A . D 4 HOH 123 327 123 HOH HOH A . D 4 HOH 124 328 124 HOH HOH A . D 4 HOH 125 329 125 HOH HOH A . D 4 HOH 126 330 126 HOH HOH A . D 4 HOH 127 331 127 HOH HOH A . D 4 HOH 128 332 128 HOH HOH A . D 4 HOH 129 333 129 HOH HOH A . D 4 HOH 130 334 130 HOH HOH A . D 4 HOH 131 335 131 HOH HOH A . D 4 HOH 132 336 132 HOH HOH A . D 4 HOH 133 337 133 HOH HOH A . D 4 HOH 134 338 134 HOH HOH A . D 4 HOH 135 339 135 HOH HOH A . D 4 HOH 136 340 136 HOH HOH A . D 4 HOH 137 341 137 HOH HOH A . D 4 HOH 138 342 138 HOH HOH A . D 4 HOH 139 343 139 HOH HOH A . D 4 HOH 140 344 140 HOH HOH A . D 4 HOH 141 345 141 HOH HOH A . D 4 HOH 142 346 142 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 BP3 'model building' . ? 2 REFMAC refinement 5.5.0066 ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 BP3 phasing . ? 6 # _cell.entry_id 3GH9 _cell.length_a 38.550 _cell.length_b 43.570 _cell.length_c 54.560 _cell.angle_alpha 90.00 _cell.angle_beta 107.38 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3GH9 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3GH9 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.90 _exptl_crystal.density_percent_sol 35.18 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '25-27 % PEG2000, 100mM Ammonium Acetate, 100mM MES, pH6.5, 100uM EDTA, VAPOR DIFFUSION, SITTING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9798 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I02' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I02 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9798 # _reflns.entry_id 3GH9 _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F 1 _reflns.d_resolution_low 36.79 _reflns.d_resolution_high 1.69 _reflns.number_obs 18095 _reflns.number_all 18095 _reflns.percent_possible_obs 92.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.052 _reflns.pdbx_netI_over_sigmaI 19.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.69 _reflns_shell.d_res_low 1.78 _reflns_shell.percent_possible_all 66.2 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.286 _reflns_shell.meanI_over_sigI_obs 3.5 _reflns_shell.pdbx_redundancy 4.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3GH9 _refine.ls_number_reflns_obs 17169 _refine.ls_number_reflns_all 18095 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 36.79 _refine.ls_d_res_high 1.69 _refine.ls_percent_reflns_obs 92.58 _refine.ls_R_factor_obs 0.19784 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19503 _refine.ls_R_factor_R_free 0.25004 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 914 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.947 _refine.correlation_coeff_Fo_to_Fc_free 0.919 _refine.B_iso_mean 21.136 _refine.aniso_B[1][1] -0.25 _refine.aniso_B[2][2] 1.07 _refine.aniso_B[3][3] -0.92 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.16 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 3EU3' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.407 _refine.pdbx_overall_ESU_R_Free 0.142 _refine.overall_SU_ML 0.090 _refine.overall_SU_B 5.992 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1620 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 142 _refine_hist.number_atoms_total 1767 _refine_hist.d_res_high 1.69 _refine_hist.d_res_low 36.79 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.022 ? 1673 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.225 1.967 ? 2276 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.956 5.000 ? 218 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 36.169 27.013 ? 77 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.292 15.000 ? 325 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 13.672 15.000 ? 1 'X-RAY DIFFRACTION' ? r_chiral_restr 0.081 0.200 ? 241 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.021 ? 1290 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.822 1.500 ? 1024 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.393 2.000 ? 1687 'X-RAY DIFFRACTION' ? r_scbond_it 2.027 3.000 ? 649 'X-RAY DIFFRACTION' ? r_scangle_it 3.184 4.500 ? 587 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 1.194 3.000 ? 1673 'X-RAY DIFFRACTION' ? r_sphericity_free 4.276 3.000 ? 143 'X-RAY DIFFRACTION' ? r_sphericity_bonded 3.319 3.000 ? 1624 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.690 _refine_ls_shell.d_res_low 1.734 _refine_ls_shell.number_reflns_R_work 831 _refine_ls_shell.R_factor_R_work 0.288 _refine_ls_shell.percent_reflns_obs 61.05 _refine_ls_shell.R_factor_R_free 0.383 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 39 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3GH9 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3GH9 _struct.title 'Crystal structure of EDTA-treated BdbD (Oxidised)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3GH9 _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text 'BdbD, DsbA, Trx-like, OXIDOREDUCTASE, Competence, Disulfide bond, Redox-active center' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BDBD_BACSU _struct_ref.pdbx_db_accession O32218 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NNKTEQGNDAVSGQPSIKGQPVLGKDDAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVMFHGKGSRL AALASEEVWKEDPDSFWDFHEKLFEKQPDTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETFASQVEKDSDLNQKMNI QATPTIYVNDKVIKNFADYDEIKETIEKELKGK ; _struct_ref.pdbx_align_begin 30 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3GH9 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 194 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O32218 _struct_ref_seq.db_align_beg 30 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 222 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 30 _struct_ref_seq.pdbx_auth_seq_align_end 222 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3GH9 MET A 1 ? UNP O32218 ? ? 'expression tag' 29 1 1 3GH9 LEU A 195 ? UNP O32218 ? ? 'expression tag' 223 2 1 3GH9 GLU A 196 ? UNP O32218 ? ? 'expression tag' 224 3 1 3GH9 HIS A 197 ? UNP O32218 ? ? 'expression tag' 225 4 1 3GH9 HIS A 198 ? UNP O32218 ? ? 'expression tag' 226 5 1 3GH9 HIS A 199 ? UNP O32218 ? ? 'expression tag' 227 6 1 3GH9 HIS A 200 ? UNP O32218 ? ? 'expression tag' 228 7 1 3GH9 HIS A 201 ? UNP O32218 ? ? 'expression tag' 229 8 1 3GH9 HIS A 202 ? UNP O32218 ? ? 'expression tag' 230 9 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 CYS A 41 ? ILE A 51 ? CYS A 69 ILE A 79 1 ? 11 HELX_P HELX_P2 2 ILE A 51 ? PHE A 59 ? ILE A 79 PHE A 87 1 ? 9 HELX_P HELX_P3 3 GLY A 76 ? ASP A 93 ? GLY A 104 ASP A 121 1 ? 18 HELX_P HELX_P4 4 SER A 96 ? GLN A 108 ? SER A 124 GLN A 136 1 ? 13 HELX_P HELX_P5 5 THR A 117 ? THR A 129 ? THR A 145 THR A 157 1 ? 13 HELX_P HELX_P6 6 LYS A 132 ? GLU A 143 ? LYS A 160 GLU A 171 1 ? 12 HELX_P HELX_P7 7 PHE A 145 ? MET A 159 ? PHE A 173 MET A 187 1 ? 15 HELX_P HELX_P8 8 ASP A 179 ? LYS A 194 ? ASP A 207 LYS A 222 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 41 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 44 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 69 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 72 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.143 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id CYS _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 41 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id CYS _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 44 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id CYS _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 69 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id CYS _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 72 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom SG _pdbx_modification_feature.modified_residue_id_linking_atom SG _pdbx_modification_feature.modified_residue_id . _pdbx_modification_feature.ref_pcm_id . _pdbx_modification_feature.ref_comp_id . _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Disulfide bridge' # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id THR _struct_mon_prot_cis.label_seq_id 164 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id THR _struct_mon_prot_cis.auth_seq_id 192 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 165 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 193 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -3.35 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 23 ? LEU A 24 ? VAL A 51 LEU A 52 A 2 VAL A 65 ? ASN A 71 ? VAL A 93 ASN A 99 A 3 VAL A 31 ? GLY A 37 ? VAL A 59 GLY A 65 A 4 THR A 166 ? VAL A 169 ? THR A 194 VAL A 197 A 5 LYS A 172 ? VAL A 173 ? LYS A 200 VAL A 201 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 24 ? N LEU A 52 O PHE A 67 ? O PHE A 95 A 2 3 O SER A 68 ? O SER A 96 N GLU A 35 ? N GLU A 63 A 3 4 N VAL A 34 ? N VAL A 62 O TYR A 168 ? O TYR A 196 A 4 5 N VAL A 169 ? N VAL A 197 O LYS A 172 ? O LYS A 200 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id EDO _struct_site.pdbx_auth_seq_id 301 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 7 _struct_site.details 'BINDING SITE FOR RESIDUE EDO A 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 HOH D . ? HOH A 3 . ? 1_555 ? 2 AC1 7 GLU A 35 ? GLU A 63 . ? 1_555 ? 3 AC1 7 ASN A 48 ? ASN A 76 . ? 1_555 ? 4 AC1 7 PHE A 52 ? PHE A 80 . ? 1_555 ? 5 AC1 7 PHE A 67 ? PHE A 95 . ? 1_555 ? 6 AC1 7 PHE A 69 ? PHE A 97 . ? 1_555 ? 7 AC1 7 HIS A 101 ? HIS A 129 . ? 1_555 ? # _pdbx_entry_details.entry_id 3GH9 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OD1 A ASN 184 ? B O A HOH 340 ? ? 1.91 2 1 O A HOH 249 ? ? O A HOH 346 ? ? 1.94 3 1 NZ A LYS 170 ? ? O A HOH 303 ? ? 2.13 4 1 OD1 A ASN 99 ? ? O A HOH 262 ? ? 2.14 5 1 NZ A LYS 94 ? ? O A HOH 336 ? ? 2.19 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 NZ _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 LYS _pdbx_validate_symm_contact.auth_seq_id_1 47 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 ASP _pdbx_validate_symm_contact.auth_seq_id_2 169 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_656 _pdbx_validate_symm_contact.dist 1.92 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 CYS _pdbx_validate_rmsd_angle.auth_seq_id_1 69 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CB _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 CYS _pdbx_validate_rmsd_angle.auth_seq_id_2 69 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 SG _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 CYS _pdbx_validate_rmsd_angle.auth_seq_id_3 69 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 121.01 _pdbx_validate_rmsd_angle.angle_target_value 114.20 _pdbx_validate_rmsd_angle.angle_deviation 6.81 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.10 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 87 ? ? -132.81 -42.01 2 1 MET A 101 ? A -109.57 73.68 3 1 ASN A 198 ? ? 48.15 -118.34 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 29 ? A MET 1 2 1 Y 1 A ASN 30 ? A ASN 2 3 1 Y 1 A ASN 31 ? A ASN 3 4 1 Y 1 A LYS 32 ? A LYS 4 5 1 Y 1 A THR 33 ? A THR 5 6 1 Y 1 A GLU 34 ? A GLU 6 7 1 Y 1 A GLN 35 ? A GLN 7 8 1 Y 1 A GLY 36 ? A GLY 8 9 1 Y 1 A LEU 223 ? A LEU 195 10 1 Y 1 A GLU 224 ? A GLU 196 11 1 Y 1 A HIS 225 ? A HIS 197 12 1 Y 1 A HIS 226 ? A HIS 198 13 1 Y 1 A HIS 227 ? A HIS 199 14 1 Y 1 A HIS 228 ? A HIS 200 15 1 Y 1 A HIS 229 ? A HIS 201 16 1 Y 1 A HIS 230 ? A HIS 202 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EDO C1 C N N 88 EDO O1 O N N 89 EDO C2 C N N 90 EDO O2 O N N 91 EDO H11 H N N 92 EDO H12 H N N 93 EDO HO1 H N N 94 EDO H21 H N N 95 EDO H22 H N N 96 EDO HO2 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 HIS N N N N 147 HIS CA C N S 148 HIS C C N N 149 HIS O O N N 150 HIS CB C N N 151 HIS CG C Y N 152 HIS ND1 N Y N 153 HIS CD2 C Y N 154 HIS CE1 C Y N 155 HIS NE2 N Y N 156 HIS OXT O N N 157 HIS H H N N 158 HIS H2 H N N 159 HIS HA H N N 160 HIS HB2 H N N 161 HIS HB3 H N N 162 HIS HD1 H N N 163 HIS HD2 H N N 164 HIS HE1 H N N 165 HIS HE2 H N N 166 HIS HXT H N N 167 HOH O O N N 168 HOH H1 H N N 169 HOH H2 H N N 170 ILE N N N N 171 ILE CA C N S 172 ILE C C N N 173 ILE O O N N 174 ILE CB C N S 175 ILE CG1 C N N 176 ILE CG2 C N N 177 ILE CD1 C N N 178 ILE OXT O N N 179 ILE H H N N 180 ILE H2 H N N 181 ILE HA H N N 182 ILE HB H N N 183 ILE HG12 H N N 184 ILE HG13 H N N 185 ILE HG21 H N N 186 ILE HG22 H N N 187 ILE HG23 H N N 188 ILE HD11 H N N 189 ILE HD12 H N N 190 ILE HD13 H N N 191 ILE HXT H N N 192 LEU N N N N 193 LEU CA C N S 194 LEU C C N N 195 LEU O O N N 196 LEU CB C N N 197 LEU CG C N N 198 LEU CD1 C N N 199 LEU CD2 C N N 200 LEU OXT O N N 201 LEU H H N N 202 LEU H2 H N N 203 LEU HA H N N 204 LEU HB2 H N N 205 LEU HB3 H N N 206 LEU HG H N N 207 LEU HD11 H N N 208 LEU HD12 H N N 209 LEU HD13 H N N 210 LEU HD21 H N N 211 LEU HD22 H N N 212 LEU HD23 H N N 213 LEU HXT H N N 214 LYS N N N N 215 LYS CA C N S 216 LYS C C N N 217 LYS O O N N 218 LYS CB C N N 219 LYS CG C N N 220 LYS CD C N N 221 LYS CE C N N 222 LYS NZ N N N 223 LYS OXT O N N 224 LYS H H N N 225 LYS H2 H N N 226 LYS HA H N N 227 LYS HB2 H N N 228 LYS HB3 H N N 229 LYS HG2 H N N 230 LYS HG3 H N N 231 LYS HD2 H N N 232 LYS HD3 H N N 233 LYS HE2 H N N 234 LYS HE3 H N N 235 LYS HZ1 H N N 236 LYS HZ2 H N N 237 LYS HZ3 H N N 238 LYS HXT H N N 239 MET N N N N 240 MET CA C N S 241 MET C C N N 242 MET O O N N 243 MET CB C N N 244 MET CG C N N 245 MET SD S N N 246 MET CE C N N 247 MET OXT O N N 248 MET H H N N 249 MET H2 H N N 250 MET HA H N N 251 MET HB2 H N N 252 MET HB3 H N N 253 MET HG2 H N N 254 MET HG3 H N N 255 MET HE1 H N N 256 MET HE2 H N N 257 MET HE3 H N N 258 MET HXT H N N 259 PHE N N N N 260 PHE CA C N S 261 PHE C C N N 262 PHE O O N N 263 PHE CB C N N 264 PHE CG C Y N 265 PHE CD1 C Y N 266 PHE CD2 C Y N 267 PHE CE1 C Y N 268 PHE CE2 C Y N 269 PHE CZ C Y N 270 PHE OXT O N N 271 PHE H H N N 272 PHE H2 H N N 273 PHE HA H N N 274 PHE HB2 H N N 275 PHE HB3 H N N 276 PHE HD1 H N N 277 PHE HD2 H N N 278 PHE HE1 H N N 279 PHE HE2 H N N 280 PHE HZ H N N 281 PHE HXT H N N 282 PRO N N N N 283 PRO CA C N S 284 PRO C C N N 285 PRO O O N N 286 PRO CB C N N 287 PRO CG C N N 288 PRO CD C N N 289 PRO OXT O N N 290 PRO H H N N 291 PRO HA H N N 292 PRO HB2 H N N 293 PRO HB3 H N N 294 PRO HG2 H N N 295 PRO HG3 H N N 296 PRO HD2 H N N 297 PRO HD3 H N N 298 PRO HXT H N N 299 SER N N N N 300 SER CA C N S 301 SER C C N N 302 SER O O N N 303 SER CB C N N 304 SER OG O N N 305 SER OXT O N N 306 SER H H N N 307 SER H2 H N N 308 SER HA H N N 309 SER HB2 H N N 310 SER HB3 H N N 311 SER HG H N N 312 SER HXT H N N 313 THR N N N N 314 THR CA C N S 315 THR C C N N 316 THR O O N N 317 THR CB C N R 318 THR OG1 O N N 319 THR CG2 C N N 320 THR OXT O N N 321 THR H H N N 322 THR H2 H N N 323 THR HA H N N 324 THR HB H N N 325 THR HG1 H N N 326 THR HG21 H N N 327 THR HG22 H N N 328 THR HG23 H N N 329 THR HXT H N N 330 TRP N N N N 331 TRP CA C N S 332 TRP C C N N 333 TRP O O N N 334 TRP CB C N N 335 TRP CG C Y N 336 TRP CD1 C Y N 337 TRP CD2 C Y N 338 TRP NE1 N Y N 339 TRP CE2 C Y N 340 TRP CE3 C Y N 341 TRP CZ2 C Y N 342 TRP CZ3 C Y N 343 TRP CH2 C Y N 344 TRP OXT O N N 345 TRP H H N N 346 TRP H2 H N N 347 TRP HA H N N 348 TRP HB2 H N N 349 TRP HB3 H N N 350 TRP HD1 H N N 351 TRP HE1 H N N 352 TRP HE3 H N N 353 TRP HZ2 H N N 354 TRP HZ3 H N N 355 TRP HH2 H N N 356 TRP HXT H N N 357 TYR N N N N 358 TYR CA C N S 359 TYR C C N N 360 TYR O O N N 361 TYR CB C N N 362 TYR CG C Y N 363 TYR CD1 C Y N 364 TYR CD2 C Y N 365 TYR CE1 C Y N 366 TYR CE2 C Y N 367 TYR CZ C Y N 368 TYR OH O N N 369 TYR OXT O N N 370 TYR H H N N 371 TYR H2 H N N 372 TYR HA H N N 373 TYR HB2 H N N 374 TYR HB3 H N N 375 TYR HD1 H N N 376 TYR HD2 H N N 377 TYR HE1 H N N 378 TYR HE2 H N N 379 TYR HH H N N 380 TYR HXT H N N 381 VAL N N N N 382 VAL CA C N S 383 VAL C C N N 384 VAL O O N N 385 VAL CB C N N 386 VAL CG1 C N N 387 VAL CG2 C N N 388 VAL OXT O N N 389 VAL H H N N 390 VAL H2 H N N 391 VAL HA H N N 392 VAL HB H N N 393 VAL HG11 H N N 394 VAL HG12 H N N 395 VAL HG13 H N N 396 VAL HG21 H N N 397 VAL HG22 H N N 398 VAL HG23 H N N 399 VAL HXT H N N 400 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 ILE N CA sing N N 161 ILE N H sing N N 162 ILE N H2 sing N N 163 ILE CA C sing N N 164 ILE CA CB sing N N 165 ILE CA HA sing N N 166 ILE C O doub N N 167 ILE C OXT sing N N 168 ILE CB CG1 sing N N 169 ILE CB CG2 sing N N 170 ILE CB HB sing N N 171 ILE CG1 CD1 sing N N 172 ILE CG1 HG12 sing N N 173 ILE CG1 HG13 sing N N 174 ILE CG2 HG21 sing N N 175 ILE CG2 HG22 sing N N 176 ILE CG2 HG23 sing N N 177 ILE CD1 HD11 sing N N 178 ILE CD1 HD12 sing N N 179 ILE CD1 HD13 sing N N 180 ILE OXT HXT sing N N 181 LEU N CA sing N N 182 LEU N H sing N N 183 LEU N H2 sing N N 184 LEU CA C sing N N 185 LEU CA CB sing N N 186 LEU CA HA sing N N 187 LEU C O doub N N 188 LEU C OXT sing N N 189 LEU CB CG sing N N 190 LEU CB HB2 sing N N 191 LEU CB HB3 sing N N 192 LEU CG CD1 sing N N 193 LEU CG CD2 sing N N 194 LEU CG HG sing N N 195 LEU CD1 HD11 sing N N 196 LEU CD1 HD12 sing N N 197 LEU CD1 HD13 sing N N 198 LEU CD2 HD21 sing N N 199 LEU CD2 HD22 sing N N 200 LEU CD2 HD23 sing N N 201 LEU OXT HXT sing N N 202 LYS N CA sing N N 203 LYS N H sing N N 204 LYS N H2 sing N N 205 LYS CA C sing N N 206 LYS CA CB sing N N 207 LYS CA HA sing N N 208 LYS C O doub N N 209 LYS C OXT sing N N 210 LYS CB CG sing N N 211 LYS CB HB2 sing N N 212 LYS CB HB3 sing N N 213 LYS CG CD sing N N 214 LYS CG HG2 sing N N 215 LYS CG HG3 sing N N 216 LYS CD CE sing N N 217 LYS CD HD2 sing N N 218 LYS CD HD3 sing N N 219 LYS CE NZ sing N N 220 LYS CE HE2 sing N N 221 LYS CE HE3 sing N N 222 LYS NZ HZ1 sing N N 223 LYS NZ HZ2 sing N N 224 LYS NZ HZ3 sing N N 225 LYS OXT HXT sing N N 226 MET N CA sing N N 227 MET N H sing N N 228 MET N H2 sing N N 229 MET CA C sing N N 230 MET CA CB sing N N 231 MET CA HA sing N N 232 MET C O doub N N 233 MET C OXT sing N N 234 MET CB CG sing N N 235 MET CB HB2 sing N N 236 MET CB HB3 sing N N 237 MET CG SD sing N N 238 MET CG HG2 sing N N 239 MET CG HG3 sing N N 240 MET SD CE sing N N 241 MET CE HE1 sing N N 242 MET CE HE2 sing N N 243 MET CE HE3 sing N N 244 MET OXT HXT sing N N 245 PHE N CA sing N N 246 PHE N H sing N N 247 PHE N H2 sing N N 248 PHE CA C sing N N 249 PHE CA CB sing N N 250 PHE CA HA sing N N 251 PHE C O doub N N 252 PHE C OXT sing N N 253 PHE CB CG sing N N 254 PHE CB HB2 sing N N 255 PHE CB HB3 sing N N 256 PHE CG CD1 doub Y N 257 PHE CG CD2 sing Y N 258 PHE CD1 CE1 sing Y N 259 PHE CD1 HD1 sing N N 260 PHE CD2 CE2 doub Y N 261 PHE CD2 HD2 sing N N 262 PHE CE1 CZ doub Y N 263 PHE CE1 HE1 sing N N 264 PHE CE2 CZ sing Y N 265 PHE CE2 HE2 sing N N 266 PHE CZ HZ sing N N 267 PHE OXT HXT sing N N 268 PRO N CA sing N N 269 PRO N CD sing N N 270 PRO N H sing N N 271 PRO CA C sing N N 272 PRO CA CB sing N N 273 PRO CA HA sing N N 274 PRO C O doub N N 275 PRO C OXT sing N N 276 PRO CB CG sing N N 277 PRO CB HB2 sing N N 278 PRO CB HB3 sing N N 279 PRO CG CD sing N N 280 PRO CG HG2 sing N N 281 PRO CG HG3 sing N N 282 PRO CD HD2 sing N N 283 PRO CD HD3 sing N N 284 PRO OXT HXT sing N N 285 SER N CA sing N N 286 SER N H sing N N 287 SER N H2 sing N N 288 SER CA C sing N N 289 SER CA CB sing N N 290 SER CA HA sing N N 291 SER C O doub N N 292 SER C OXT sing N N 293 SER CB OG sing N N 294 SER CB HB2 sing N N 295 SER CB HB3 sing N N 296 SER OG HG sing N N 297 SER OXT HXT sing N N 298 THR N CA sing N N 299 THR N H sing N N 300 THR N H2 sing N N 301 THR CA C sing N N 302 THR CA CB sing N N 303 THR CA HA sing N N 304 THR C O doub N N 305 THR C OXT sing N N 306 THR CB OG1 sing N N 307 THR CB CG2 sing N N 308 THR CB HB sing N N 309 THR OG1 HG1 sing N N 310 THR CG2 HG21 sing N N 311 THR CG2 HG22 sing N N 312 THR CG2 HG23 sing N N 313 THR OXT HXT sing N N 314 TRP N CA sing N N 315 TRP N H sing N N 316 TRP N H2 sing N N 317 TRP CA C sing N N 318 TRP CA CB sing N N 319 TRP CA HA sing N N 320 TRP C O doub N N 321 TRP C OXT sing N N 322 TRP CB CG sing N N 323 TRP CB HB2 sing N N 324 TRP CB HB3 sing N N 325 TRP CG CD1 doub Y N 326 TRP CG CD2 sing Y N 327 TRP CD1 NE1 sing Y N 328 TRP CD1 HD1 sing N N 329 TRP CD2 CE2 doub Y N 330 TRP CD2 CE3 sing Y N 331 TRP NE1 CE2 sing Y N 332 TRP NE1 HE1 sing N N 333 TRP CE2 CZ2 sing Y N 334 TRP CE3 CZ3 doub Y N 335 TRP CE3 HE3 sing N N 336 TRP CZ2 CH2 doub Y N 337 TRP CZ2 HZ2 sing N N 338 TRP CZ3 CH2 sing Y N 339 TRP CZ3 HZ3 sing N N 340 TRP CH2 HH2 sing N N 341 TRP OXT HXT sing N N 342 TYR N CA sing N N 343 TYR N H sing N N 344 TYR N H2 sing N N 345 TYR CA C sing N N 346 TYR CA CB sing N N 347 TYR CA HA sing N N 348 TYR C O doub N N 349 TYR C OXT sing N N 350 TYR CB CG sing N N 351 TYR CB HB2 sing N N 352 TYR CB HB3 sing N N 353 TYR CG CD1 doub Y N 354 TYR CG CD2 sing Y N 355 TYR CD1 CE1 sing Y N 356 TYR CD1 HD1 sing N N 357 TYR CD2 CE2 doub Y N 358 TYR CD2 HD2 sing N N 359 TYR CE1 CZ doub Y N 360 TYR CE1 HE1 sing N N 361 TYR CE2 CZ sing Y N 362 TYR CE2 HE2 sing N N 363 TYR CZ OH sing N N 364 TYR OH HH sing N N 365 TYR OXT HXT sing N N 366 VAL N CA sing N N 367 VAL N H sing N N 368 VAL N H2 sing N N 369 VAL CA C sing N N 370 VAL CA CB sing N N 371 VAL CA HA sing N N 372 VAL C O doub N N 373 VAL C OXT sing N N 374 VAL CB CG1 sing N N 375 VAL CB CG2 sing N N 376 VAL CB HB sing N N 377 VAL CG1 HG11 sing N N 378 VAL CG1 HG12 sing N N 379 VAL CG1 HG13 sing N N 380 VAL CG2 HG21 sing N N 381 VAL CG2 HG22 sing N N 382 VAL CG2 HG23 sing N N 383 VAL OXT HXT sing N N 384 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3EU3 _pdbx_initial_refinement_model.details 'PDB ENTRY 3EU3' # _atom_sites.entry_id 3GH9 _atom_sites.fract_transf_matrix[1][1] 0.025940 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.008119 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022952 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019205 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S X # loop_