data_3GI5 # _entry.id 3GI5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.350 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3GI5 pdb_00003gi5 10.2210/pdb3gi5/pdb RCSB RCSB051889 ? ? WWPDB D_1000051889 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3GI4 . unspecified PDB 3GI6 . unspecified # _pdbx_database_status.entry_id 3GI5 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2009-03-05 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nalam, M.N.L.' 1 'Schiffer, C.A.' 2 # _citation.id primary _citation.title ;Evaluating the substrate-envelope hypothesis: structural analysis of novel HIV-1 protease inhibitors designed to be robust against drug resistance. ; _citation.journal_abbrev J.Virol. _citation.journal_volume 84 _citation.page_first 5368 _citation.page_last 5378 _citation.year 2010 _citation.journal_id_ASTM JOVIAM _citation.country US _citation.journal_id_ISSN 0022-538X _citation.journal_id_CSD 0825 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20237088 _citation.pdbx_database_id_DOI 10.1128/JVI.02531-09 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nalam, M.N.' 1 ? primary 'Ali, A.' 2 ? primary 'Altman, M.D.' 3 ? primary 'Reddy, G.S.' 4 ? primary 'Chellappan, S.' 5 ? primary 'Kairys, V.' 6 ? primary 'Ozen, A.' 7 ? primary 'Cao, H.' 8 ? primary 'Gilson, M.K.' 9 ? primary 'Tidor, B.' 10 ? primary 'Rana, T.M.' 11 ? primary 'Schiffer, C.A.' 12 ? # _cell.length_a 50.831 _cell.length_b 58.342 _cell.length_c 61.629 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3GI5 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 3GI5 _symmetry.Int_Tables_number 19 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Protease 10815.790 2 ? ? ? ? 2 non-polymer syn ;(5S)-3-(3-Acetylphenyl)-N-[(1S,2R)-3-[(1,3-benzodioxol-5-ylsulfonyl)(2-methylpropyl)amino]-2-hydroxy-1-(phenylmethyl)pr opyl]-2-oxo-5-oxazolidinecarboxamide ; 651.727 1 ? ? ? ? 3 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 4 water nat water 18.015 173 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF ; _entity_poly.pdbx_seq_one_letter_code_can ;PQITLWKRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 GLN n 1 3 ILE n 1 4 THR n 1 5 LEU n 1 6 TRP n 1 7 LYS n 1 8 ARG n 1 9 PRO n 1 10 LEU n 1 11 VAL n 1 12 THR n 1 13 ILE n 1 14 ARG n 1 15 ILE n 1 16 GLY n 1 17 GLY n 1 18 GLN n 1 19 LEU n 1 20 LYS n 1 21 GLU n 1 22 ALA n 1 23 LEU n 1 24 LEU n 1 25 ASP n 1 26 THR n 1 27 GLY n 1 28 ALA n 1 29 ASP n 1 30 ASP n 1 31 THR n 1 32 VAL n 1 33 LEU n 1 34 GLU n 1 35 GLU n 1 36 MET n 1 37 ASN n 1 38 LEU n 1 39 PRO n 1 40 GLY n 1 41 LYS n 1 42 TRP n 1 43 LYS n 1 44 PRO n 1 45 LYS n 1 46 MET n 1 47 ILE n 1 48 GLY n 1 49 GLY n 1 50 ILE n 1 51 GLY n 1 52 GLY n 1 53 PHE n 1 54 ILE n 1 55 LYS n 1 56 VAL n 1 57 ARG n 1 58 GLN n 1 59 TYR n 1 60 ASP n 1 61 GLN n 1 62 ILE n 1 63 PRO n 1 64 ILE n 1 65 GLU n 1 66 ILE n 1 67 CYS n 1 68 GLY n 1 69 HIS n 1 70 LYS n 1 71 ALA n 1 72 ILE n 1 73 GLY n 1 74 THR n 1 75 VAL n 1 76 LEU n 1 77 VAL n 1 78 GLY n 1 79 PRO n 1 80 THR n 1 81 PRO n 1 82 VAL n 1 83 ASN n 1 84 ILE n 1 85 ILE n 1 86 GLY n 1 87 ARG n 1 88 ASN n 1 89 LEU n 1 90 LEU n 1 91 THR n 1 92 GLN n 1 93 ILE n 1 94 GLY n 1 95 CYS n 1 96 THR n 1 97 LEU n 1 98 ASN n 1 99 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene pol _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain SF2 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human immunodeficiency virus 1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11676 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain TAP56 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PXC35 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code O38732_9HIV1 _struct_ref.pdbx_db_accession O38732 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PQITLWQRPLVTIRIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3GI5 A 1 ? 99 ? O38732 1 ? 99 ? 1 99 2 1 3GI5 B 1 ? 99 ? O38732 1 ? 99 ? 1 99 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3GI5 LYS A 7 ? UNP O38732 GLN 7 'engineered mutation' 7 1 2 3GI5 LYS B 7 ? UNP O38732 GLN 7 'engineered mutation' 7 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 K62 non-polymer . ;(5S)-3-(3-Acetylphenyl)-N-[(1S,2R)-3-[(1,3-benzodioxol-5-ylsulfonyl)(2-methylpropyl)amino]-2-hydroxy-1-(phenylmethyl)pr opyl]-2-oxo-5-oxazolidinecarboxamide ; ;(5S)-3-(3-acetylphenyl)-N-{(1S,2R)-3-[(1,3-benzodioxol-5-ylsulfonyl)(2-methylpropyl)amino]-1-benzyl-2-hydroxypropyl}-2- oxo-1,3-oxazolidine-5-carboxamide ; 'C33 H37 N3 O9 S' 651.727 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3GI5 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.11 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 41.77 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 6.2 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details '126 mM sodium phosphate pH 6.2, 63 mM sodium citrate, 24-29% ammonium sulphate, vapor diffusion, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 200 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 3GI5 _reflns.d_resolution_high 1.800 _reflns.d_resolution_low 50.000 _reflns.number_obs 17324 _reflns.pdbx_Rmerge_I_obs 0.056 _reflns.pdbx_chi_squared 1.092 _reflns.pdbx_redundancy 6.000 _reflns.percent_possible_obs 98.400 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_netI_over_sigmaI ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.80 1.86 ? ? ? 0.339 ? ? 0.944 3.50 ? 1482 86.10 1 1 1.86 1.94 ? ? ? 0.264 ? ? 1.000 5.30 ? 1720 99.00 2 1 1.94 2.03 ? ? ? 0.230 ? ? 1.289 6.30 ? 1714 100.00 3 1 2.03 2.13 ? ? ? 0.184 ? ? 1.486 6.30 ? 1733 99.80 4 1 2.13 2.27 ? ? ? 0.127 ? ? 1.086 6.30 ? 1733 100.00 5 1 2.27 2.44 ? ? ? 0.090 ? ? 1.032 6.40 ? 1745 99.80 6 1 2.44 2.69 ? ? ? 0.071 ? ? 0.986 6.40 ? 1756 99.90 7 1 2.69 3.08 ? ? ? 0.057 ? ? 1.030 6.40 ? 1774 100.00 8 1 3.08 3.88 ? ? ? 0.043 ? ? 1.034 6.30 ? 1785 99.90 9 1 3.88 50.00 ? ? ? 0.033 ? ? 0.947 6.10 ? 1882 99.20 10 1 # _refine.entry_id 3GI5 _refine.ls_d_res_high 1.800 _refine.ls_d_res_low 25.30 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 98.410 _refine.ls_number_reflns_obs 17282 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_obs 0.171 _refine.ls_R_factor_R_work 0.170 _refine.ls_R_factor_R_free 0.194 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 875 _refine.B_iso_mean 34.524 _refine.aniso_B[1][1] -0.290 _refine.aniso_B[2][2] -0.340 _refine.aniso_B[3][3] 0.630 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.964 _refine.correlation_coeff_Fo_to_Fc_free 0.958 _refine.pdbx_overall_ESU_R 0.135 _refine.pdbx_overall_ESU_R_Free 0.117 _refine.overall_SU_ML 0.081 _refine.overall_SU_B 4.950 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.B_iso_max 64.56 _refine.B_iso_min 19.29 _refine.occupancy_max 1.00 _refine.occupancy_min 0.50 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1498 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 51 _refine_hist.number_atoms_solvent 173 _refine_hist.number_atoms_total 1722 _refine_hist.d_res_high 1.800 _refine_hist.d_res_low 25.30 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1616 0.008 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1544 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2208 1.356 2.021 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 3589 0.677 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 204 6.138 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 56 41.511 25.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 272 9.908 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 8 14.819 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 258 0.074 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1769 0.004 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 288 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 227 0.174 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1515 0.173 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 752 0.165 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 971 0.079 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 126 0.143 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 12 0.127 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 57 0.178 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 18 0.164 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1068 0.502 1.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 420 0.101 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1631 0.731 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 673 0.997 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 577 1.468 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.800 _refine_ls_shell.d_res_low 1.847 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 83.820 _refine_ls_shell.number_reflns_R_work 1018 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.255 _refine_ls_shell.R_factor_R_free 0.274 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 44 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1062 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3GI5 _struct.title 'Crystal structure of protease inhibitor, KB62 in complex with wild type HIV-1 protease' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3GI5 _struct_keywords.text 'Drug design, protease inhibitors, HIV-1 protease, Aspartyl protease, Hydrolase, Protease, HYDROLASE-HYDROLASE INHIBITOR COMPLEX' _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 86 ? THR A 91 ? GLY A 86 THR A 91 1 ? 6 HELX_P HELX_P2 2 GLY B 86 ? THR B 91 ? GLY B 86 THR B 91 1 ? 6 HELX_P HELX_P3 3 GLN B 92 ? GLY B 94 ? GLN B 92 GLY B 94 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 8 ? C ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? parallel C 4 5 ? anti-parallel C 5 6 ? parallel C 6 7 ? anti-parallel C 7 8 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 2 ? ILE A 3 ? GLN A 2 ILE A 3 A 2 THR B 96 ? ASN B 98 ? THR B 96 ASN B 98 A 3 THR A 96 ? ASN A 98 ? THR A 96 ASN A 98 A 4 GLN B 2 ? ILE B 3 ? GLN B 2 ILE B 3 B 1 LYS A 43 ? GLY A 49 ? LYS A 43 GLY A 49 B 2 GLY A 52 ? ILE A 66 ? GLY A 52 ILE A 66 B 3 HIS A 69 ? VAL A 77 ? HIS A 69 VAL A 77 B 4 VAL A 32 ? LEU A 33 ? VAL A 32 LEU A 33 B 5 ILE A 84 ? ILE A 85 ? ILE A 84 ILE A 85 B 6 GLN A 18 ? LEU A 24 ? GLN A 18 LEU A 24 B 7 LEU A 10 ? ILE A 15 ? LEU A 10 ILE A 15 B 8 GLY A 52 ? ILE A 66 ? GLY A 52 ILE A 66 C 1 LYS B 43 ? GLY B 49 ? LYS B 43 GLY B 49 C 2 GLY B 52 ? ILE B 66 ? GLY B 52 ILE B 66 C 3 HIS B 69 ? VAL B 77 ? HIS B 69 VAL B 77 C 4 THR B 31 ? LEU B 33 ? THR B 31 LEU B 33 C 5 ASN B 83 ? ILE B 85 ? ASN B 83 ILE B 85 C 6 GLN B 18 ? LEU B 24 ? GLN B 18 LEU B 24 C 7 LEU B 10 ? ILE B 15 ? LEU B 10 ILE B 15 C 8 GLY B 52 ? ILE B 66 ? GLY B 52 ILE B 66 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 3 ? N ILE A 3 O LEU B 97 ? O LEU B 97 A 2 3 O THR B 96 ? O THR B 96 N ASN A 98 ? N ASN A 98 A 3 4 N LEU A 97 ? N LEU A 97 O ILE B 3 ? O ILE B 3 B 1 2 N LYS A 43 ? N LYS A 43 O GLN A 58 ? O GLN A 58 B 2 3 N ILE A 66 ? N ILE A 66 O HIS A 69 ? O HIS A 69 B 3 4 O LEU A 76 ? O LEU A 76 N LEU A 33 ? N LEU A 33 B 4 5 N VAL A 32 ? N VAL A 32 O ILE A 84 ? O ILE A 84 B 5 6 O ILE A 85 ? O ILE A 85 N LEU A 23 ? N LEU A 23 B 6 7 O LYS A 20 ? O LYS A 20 N ILE A 13 ? N ILE A 13 B 7 8 N ARG A 14 ? N ARG A 14 O GLU A 65 ? O GLU A 65 C 1 2 N LYS B 45 ? N LYS B 45 O VAL B 56 ? O VAL B 56 C 2 3 N TYR B 59 ? N TYR B 59 O VAL B 75 ? O VAL B 75 C 3 4 O LEU B 76 ? O LEU B 76 N LEU B 33 ? N LEU B 33 C 4 5 N VAL B 32 ? N VAL B 32 O ILE B 84 ? O ILE B 84 C 5 6 O ILE B 85 ? O ILE B 85 N LEU B 23 ? N LEU B 23 C 6 7 O LYS B 20 ? O LYS B 20 N ILE B 13 ? N ILE B 13 C 7 8 N ARG B 14 ? N ARG B 14 O GLU B 65 ? O GLU B 65 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A K62 200 ? 22 'BINDING SITE FOR RESIDUE K62 A 200' AC2 Software B PO4 501 ? 9 'BINDING SITE FOR RESIDUE PO4 B 501' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 22 ASP A 25 ? ASP A 25 . ? 1_555 ? 2 AC1 22 GLY A 27 ? GLY A 27 . ? 1_555 ? 3 AC1 22 ALA A 28 ? ALA A 28 . ? 1_555 ? 4 AC1 22 ASP A 29 ? ASP A 29 . ? 1_555 ? 5 AC1 22 GLY A 48 ? GLY A 48 . ? 1_555 ? 6 AC1 22 ILE A 50 ? ILE A 50 . ? 1_555 ? 7 AC1 22 VAL A 82 ? VAL A 82 . ? 1_555 ? 8 AC1 22 HOH E . ? HOH A 101 . ? 1_555 ? 9 AC1 22 HOH E . ? HOH A 120 . ? 1_555 ? 10 AC1 22 HOH E . ? HOH A 135 . ? 1_555 ? 11 AC1 22 HOH E . ? HOH A 202 . ? 1_555 ? 12 AC1 22 ARG B 8 ? ARG B 8 . ? 1_555 ? 13 AC1 22 ASP B 25 ? ASP B 25 . ? 1_555 ? 14 AC1 22 GLY B 27 ? GLY B 27 . ? 1_555 ? 15 AC1 22 ALA B 28 ? ALA B 28 . ? 1_555 ? 16 AC1 22 ASP B 30 ? ASP B 30 . ? 1_555 ? 17 AC1 22 GLY B 48 ? GLY B 48 . ? 1_555 ? 18 AC1 22 GLY B 49 ? GLY B 49 . ? 1_555 ? 19 AC1 22 PRO B 81 ? PRO B 81 . ? 1_555 ? 20 AC1 22 VAL B 82 ? VAL B 82 . ? 1_555 ? 21 AC1 22 ILE B 84 ? ILE B 84 . ? 1_555 ? 22 AC1 22 HOH F . ? HOH B 133 . ? 2_564 ? 23 AC2 9 ARG A 14 ? ARG A 14 . ? 1_455 ? 24 AC2 9 GLY A 16 ? GLY A 16 . ? 1_455 ? 25 AC2 9 GLY A 17 ? GLY A 17 . ? 1_455 ? 26 AC2 9 HOH E . ? HOH A 131 . ? 1_455 ? 27 AC2 9 HOH E . ? HOH A 144 . ? 1_455 ? 28 AC2 9 HOH E . ? HOH A 170 . ? 1_455 ? 29 AC2 9 GLY B 16 ? GLY B 16 . ? 1_555 ? 30 AC2 9 HOH F . ? HOH B 117 . ? 1_555 ? 31 AC2 9 HOH F . ? HOH B 176 . ? 1_555 ? # _atom_sites.entry_id 3GI5 _atom_sites.fract_transf_matrix[1][1] 0.019673 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017140 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016226 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 1 PRO PRO A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 TRP 6 6 6 TRP TRP A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 MET 36 36 36 MET MET A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 TRP 42 42 42 TRP TRP A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 MET 46 46 46 MET MET A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 PRO 63 63 63 PRO PRO A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 CYS 67 67 67 CYS CYS A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 HIS 69 69 69 HIS HIS A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 THR 80 80 80 THR THR A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 ASN 83 83 83 ASN ASN A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 GLN 92 92 92 GLN GLN A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 CYS 95 95 95 CYS CYS A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 PHE 99 99 99 PHE PHE A . n B 1 1 PRO 1 1 1 PRO PRO B . n B 1 2 GLN 2 2 2 GLN GLN B . n B 1 3 ILE 3 3 3 ILE ILE B . n B 1 4 THR 4 4 4 THR THR B . n B 1 5 LEU 5 5 5 LEU LEU B . n B 1 6 TRP 6 6 6 TRP TRP B . n B 1 7 LYS 7 7 7 LYS LYS B . n B 1 8 ARG 8 8 8 ARG ARG B . n B 1 9 PRO 9 9 9 PRO PRO B . n B 1 10 LEU 10 10 10 LEU LEU B . n B 1 11 VAL 11 11 11 VAL VAL B . n B 1 12 THR 12 12 12 THR THR B . n B 1 13 ILE 13 13 13 ILE ILE B . n B 1 14 ARG 14 14 14 ARG ARG B . n B 1 15 ILE 15 15 15 ILE ILE B . n B 1 16 GLY 16 16 16 GLY GLY B . n B 1 17 GLY 17 17 17 GLY GLY B . n B 1 18 GLN 18 18 18 GLN GLN B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 LYS 20 20 20 LYS LYS B . n B 1 21 GLU 21 21 21 GLU GLU B . n B 1 22 ALA 22 22 22 ALA ALA B . n B 1 23 LEU 23 23 23 LEU LEU B . n B 1 24 LEU 24 24 24 LEU LEU B . n B 1 25 ASP 25 25 25 ASP ASP B . n B 1 26 THR 26 26 26 THR THR B . n B 1 27 GLY 27 27 27 GLY GLY B . n B 1 28 ALA 28 28 28 ALA ALA B . n B 1 29 ASP 29 29 29 ASP ASP B . n B 1 30 ASP 30 30 30 ASP ASP B . n B 1 31 THR 31 31 31 THR THR B . n B 1 32 VAL 32 32 32 VAL VAL B . n B 1 33 LEU 33 33 33 LEU LEU B . n B 1 34 GLU 34 34 34 GLU GLU B . n B 1 35 GLU 35 35 35 GLU GLU B . n B 1 36 MET 36 36 36 MET MET B . n B 1 37 ASN 37 37 37 ASN ASN B . n B 1 38 LEU 38 38 38 LEU LEU B . n B 1 39 PRO 39 39 39 PRO PRO B . n B 1 40 GLY 40 40 40 GLY GLY B . n B 1 41 LYS 41 41 41 LYS LYS B . n B 1 42 TRP 42 42 42 TRP TRP B . n B 1 43 LYS 43 43 43 LYS LYS B . n B 1 44 PRO 44 44 44 PRO PRO B . n B 1 45 LYS 45 45 45 LYS LYS B . n B 1 46 MET 46 46 46 MET MET B . n B 1 47 ILE 47 47 47 ILE ILE B . n B 1 48 GLY 48 48 48 GLY GLY B . n B 1 49 GLY 49 49 49 GLY GLY B . n B 1 50 ILE 50 50 50 ILE ILE B . n B 1 51 GLY 51 51 51 GLY GLY B . n B 1 52 GLY 52 52 52 GLY GLY B . n B 1 53 PHE 53 53 53 PHE PHE B . n B 1 54 ILE 54 54 54 ILE ILE B . n B 1 55 LYS 55 55 55 LYS LYS B . n B 1 56 VAL 56 56 56 VAL VAL B . n B 1 57 ARG 57 57 57 ARG ARG B . n B 1 58 GLN 58 58 58 GLN GLN B . n B 1 59 TYR 59 59 59 TYR TYR B . n B 1 60 ASP 60 60 60 ASP ASP B . n B 1 61 GLN 61 61 61 GLN GLN B . n B 1 62 ILE 62 62 62 ILE ILE B . n B 1 63 PRO 63 63 63 PRO PRO B . n B 1 64 ILE 64 64 64 ILE ILE B . n B 1 65 GLU 65 65 65 GLU GLU B . n B 1 66 ILE 66 66 66 ILE ILE B . n B 1 67 CYS 67 67 67 CYS CYS B . n B 1 68 GLY 68 68 68 GLY GLY B . n B 1 69 HIS 69 69 69 HIS HIS B . n B 1 70 LYS 70 70 70 LYS LYS B . n B 1 71 ALA 71 71 71 ALA ALA B . n B 1 72 ILE 72 72 72 ILE ILE B . n B 1 73 GLY 73 73 73 GLY GLY B . n B 1 74 THR 74 74 74 THR THR B . n B 1 75 VAL 75 75 75 VAL VAL B . n B 1 76 LEU 76 76 76 LEU LEU B . n B 1 77 VAL 77 77 77 VAL VAL B . n B 1 78 GLY 78 78 78 GLY GLY B . n B 1 79 PRO 79 79 79 PRO PRO B . n B 1 80 THR 80 80 80 THR THR B . n B 1 81 PRO 81 81 81 PRO PRO B . n B 1 82 VAL 82 82 82 VAL VAL B . n B 1 83 ASN 83 83 83 ASN ASN B . n B 1 84 ILE 84 84 84 ILE ILE B . n B 1 85 ILE 85 85 85 ILE ILE B . n B 1 86 GLY 86 86 86 GLY GLY B . n B 1 87 ARG 87 87 87 ARG ARG B . n B 1 88 ASN 88 88 88 ASN ASN B . n B 1 89 LEU 89 89 89 LEU LEU B . n B 1 90 LEU 90 90 90 LEU LEU B . n B 1 91 THR 91 91 91 THR THR B . n B 1 92 GLN 92 92 92 GLN GLN B . n B 1 93 ILE 93 93 93 ILE ILE B . n B 1 94 GLY 94 94 94 GLY GLY B . n B 1 95 CYS 95 95 95 CYS CYS B . n B 1 96 THR 96 96 96 THR THR B . n B 1 97 LEU 97 97 97 LEU LEU B . n B 1 98 ASN 98 98 98 ASN ASN B . n B 1 99 PHE 99 99 99 PHE PHE B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K62 1 200 200 K62 K62 A . D 3 PO4 1 501 501 PO4 PO4 B . E 4 HOH 1 100 6 HOH WAT A . E 4 HOH 2 101 1 HOH WAT A . E 4 HOH 3 102 102 HOH WAT A . E 4 HOH 4 103 103 HOH WAT A . E 4 HOH 5 104 104 HOH WAT A . E 4 HOH 6 105 105 HOH WAT A . E 4 HOH 7 106 8 HOH WAT A . E 4 HOH 8 107 9 HOH WAT A . E 4 HOH 9 108 10 HOH WAT A . E 4 HOH 10 109 21 HOH WAT A . E 4 HOH 11 110 22 HOH WAT A . E 4 HOH 12 111 23 HOH WAT A . E 4 HOH 13 112 112 HOH WAT A . E 4 HOH 14 113 113 HOH WAT A . E 4 HOH 15 114 114 HOH WAT A . E 4 HOH 16 115 115 HOH WAT A . E 4 HOH 17 116 24 HOH WAT A . E 4 HOH 18 117 117 HOH WAT A . E 4 HOH 19 118 118 HOH WAT A . E 4 HOH 20 119 119 HOH WAT A . E 4 HOH 21 120 17 HOH WAT A . E 4 HOH 22 121 121 HOH WAT A . E 4 HOH 23 122 122 HOH WAT A . E 4 HOH 24 123 123 HOH WAT A . E 4 HOH 25 124 124 HOH WAT A . E 4 HOH 26 125 25 HOH WAT A . E 4 HOH 27 126 26 HOH WAT A . E 4 HOH 28 127 127 HOH WAT A . E 4 HOH 29 128 27 HOH WAT A . E 4 HOH 30 129 129 HOH WAT A . E 4 HOH 31 130 130 HOH WAT A . E 4 HOH 32 131 131 HOH WAT A . E 4 HOH 33 132 3 HOH WAT A . E 4 HOH 34 133 29 HOH WAT A . E 4 HOH 35 134 134 HOH WAT A . E 4 HOH 36 135 11 HOH WAT A . E 4 HOH 37 136 136 HOH WAT A . E 4 HOH 38 137 31 HOH WAT A . E 4 HOH 39 138 138 HOH WAT A . E 4 HOH 40 139 14 HOH WAT A . E 4 HOH 41 140 44 HOH WAT A . E 4 HOH 42 141 15 HOH WAT A . E 4 HOH 43 142 33 HOH WAT A . E 4 HOH 44 143 126 HOH WAT A . E 4 HOH 45 144 35 HOH WAT A . E 4 HOH 46 145 145 HOH WAT A . E 4 HOH 47 146 146 HOH WAT A . E 4 HOH 48 147 49 HOH WAT A . E 4 HOH 49 148 50 HOH WAT A . E 4 HOH 50 149 149 HOH WAT A . E 4 HOH 51 150 150 HOH WAT A . E 4 HOH 52 151 51 HOH WAT A . E 4 HOH 53 152 52 HOH WAT A . E 4 HOH 54 153 153 HOH WAT A . E 4 HOH 55 154 154 HOH WAT A . E 4 HOH 56 155 155 HOH WAT A . E 4 HOH 57 156 156 HOH WAT A . E 4 HOH 58 157 157 HOH WAT A . E 4 HOH 59 158 158 HOH WAT A . E 4 HOH 60 159 159 HOH WAT A . E 4 HOH 61 160 160 HOH WAT A . E 4 HOH 62 161 161 HOH WAT A . E 4 HOH 63 162 162 HOH WAT A . E 4 HOH 64 163 163 HOH WAT A . E 4 HOH 65 164 164 HOH WAT A . E 4 HOH 66 165 165 HOH WAT A . E 4 HOH 67 166 38 HOH WAT A . E 4 HOH 68 167 54 HOH WAT A . E 4 HOH 69 168 55 HOH WAT A . E 4 HOH 70 169 169 HOH WAT A . E 4 HOH 71 170 56 HOH WAT A . E 4 HOH 72 171 171 HOH WAT A . E 4 HOH 73 172 172 HOH WAT A . E 4 HOH 74 173 173 HOH WAT A . E 4 HOH 75 174 57 HOH WAT A . E 4 HOH 76 175 40 HOH WAT A . E 4 HOH 77 176 42 HOH WAT A . E 4 HOH 78 177 60 HOH WAT A . E 4 HOH 79 178 61 HOH WAT A . E 4 HOH 80 179 64 HOH WAT A . E 4 HOH 81 180 77 HOH WAT A . E 4 HOH 82 181 78 HOH WAT A . E 4 HOH 83 182 66 HOH WAT A . E 4 HOH 84 183 80 HOH WAT A . E 4 HOH 85 184 68 HOH WAT A . E 4 HOH 86 185 70 HOH WAT A . E 4 HOH 87 186 83 HOH WAT A . E 4 HOH 88 187 71 HOH WAT A . E 4 HOH 89 188 85 HOH WAT A . E 4 HOH 90 189 86 HOH WAT A . E 4 HOH 91 190 87 HOH WAT A . E 4 HOH 92 191 72 HOH WAT A . E 4 HOH 93 192 74 HOH WAT A . E 4 HOH 94 193 170 HOH WAT A . E 4 HOH 95 194 91 HOH WAT A . E 4 HOH 96 196 93 HOH WAT A . E 4 HOH 97 198 95 HOH WAT A . E 4 HOH 98 199 96 HOH WAT A . E 4 HOH 99 202 98 HOH WAT A . E 4 HOH 100 203 99 HOH WAT A . F 4 HOH 1 100 100 HOH WAT B . F 4 HOH 2 101 7 HOH WAT B . F 4 HOH 3 102 101 HOH WAT B . F 4 HOH 4 103 2 HOH WAT B . F 4 HOH 5 104 132 HOH WAT B . F 4 HOH 6 105 4 HOH WAT B . F 4 HOH 7 106 106 HOH WAT B . F 4 HOH 8 107 107 HOH WAT B . F 4 HOH 9 108 108 HOH WAT B . F 4 HOH 10 109 109 HOH WAT B . F 4 HOH 11 110 110 HOH WAT B . F 4 HOH 12 111 111 HOH WAT B . F 4 HOH 13 112 5 HOH WAT B . F 4 HOH 14 113 135 HOH WAT B . F 4 HOH 15 114 12 HOH WAT B . F 4 HOH 16 115 13 HOH WAT B . F 4 HOH 17 116 116 HOH WAT B . F 4 HOH 18 117 139 HOH WAT B . F 4 HOH 19 118 141 HOH WAT B . F 4 HOH 20 119 16 HOH WAT B . F 4 HOH 21 120 120 HOH WAT B . F 4 HOH 22 121 18 HOH WAT B . F 4 HOH 23 122 19 HOH WAT B . F 4 HOH 24 123 20 HOH WAT B . F 4 HOH 25 124 142 HOH WAT B . F 4 HOH 26 125 125 HOH WAT B . F 4 HOH 27 126 143 HOH WAT B . F 4 HOH 28 127 34 HOH WAT B . F 4 HOH 29 128 128 HOH WAT B . F 4 HOH 30 129 144 HOH WAT B . F 4 HOH 31 130 36 HOH WAT B . F 4 HOH 32 131 37 HOH WAT B . F 4 HOH 33 132 28 HOH WAT B . F 4 HOH 34 133 133 HOH WAT B . F 4 HOH 35 134 166 HOH WAT B . F 4 HOH 36 135 30 HOH WAT B . F 4 HOH 37 136 39 HOH WAT B . F 4 HOH 38 137 137 HOH WAT B . F 4 HOH 39 139 32 HOH WAT B . F 4 HOH 40 140 140 HOH WAT B . F 4 HOH 41 141 45 HOH WAT B . F 4 HOH 42 142 46 HOH WAT B . F 4 HOH 43 143 47 HOH WAT B . F 4 HOH 44 144 48 HOH WAT B . F 4 HOH 45 145 41 HOH WAT B . F 4 HOH 46 147 147 HOH WAT B . F 4 HOH 47 148 148 HOH WAT B . F 4 HOH 48 149 43 HOH WAT B . F 4 HOH 49 150 63 HOH WAT B . F 4 HOH 50 151 151 HOH WAT B . F 4 HOH 51 152 152 HOH WAT B . F 4 HOH 52 154 65 HOH WAT B . F 4 HOH 53 156 67 HOH WAT B . F 4 HOH 54 158 69 HOH WAT B . F 4 HOH 55 162 73 HOH WAT B . F 4 HOH 56 164 75 HOH WAT B . F 4 HOH 57 165 76 HOH WAT B . F 4 HOH 58 166 53 HOH WAT B . F 4 HOH 59 167 167 HOH WAT B . F 4 HOH 60 168 168 HOH WAT B . F 4 HOH 61 175 58 HOH WAT B . F 4 HOH 62 176 59 HOH WAT B . F 4 HOH 63 179 62 HOH WAT B . F 4 HOH 64 182 79 HOH WAT B . F 4 HOH 65 184 81 HOH WAT B . F 4 HOH 66 185 82 HOH WAT B . F 4 HOH 67 187 84 HOH WAT B . F 4 HOH 68 191 88 HOH WAT B . F 4 HOH 69 192 89 HOH WAT B . F 4 HOH 70 193 90 HOH WAT B . F 4 HOH 71 195 92 HOH WAT B . F 4 HOH 72 197 94 HOH WAT B . F 4 HOH 73 201 97 HOH WAT B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4190 ? 1 MORE -28 ? 1 'SSA (A^2)' 9310 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-03-09 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 1 3 2021-10-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Refinement description' 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp 3 4 'Structure model' database_2 4 4 'Structure model' entity 5 4 'Structure model' pdbx_entity_nonpoly 6 4 'Structure model' struct_ref_seq_dif 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_chem_comp.name' 2 4 'Structure model' '_chem_comp.pdbx_synonyms' 3 4 'Structure model' '_database_2.pdbx_DOI' 4 4 'Structure model' '_database_2.pdbx_database_accession' 5 4 'Structure model' '_entity.pdbx_description' 6 4 'Structure model' '_pdbx_entity_nonpoly.name' 7 4 'Structure model' '_struct_ref_seq_dif.details' 8 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 9 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 10 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 20.7926 25.6699 29.1635 -0.1045 -0.1180 -0.2944 0.0638 -0.0047 -0.0120 5.9232 8.4867 2.2157 -2.4659 -0.7093 0.4459 -0.3503 0.3233 0.0270 -0.5347 0.1371 0.0700 0.4900 0.0416 0.0452 'X-RAY DIFFRACTION' 2 ? refined 19.5282 17.5952 22.7890 -0.1587 -0.2218 -0.1511 -0.0028 0.0437 0.0332 4.6653 4.4985 5.2480 -2.9210 -0.2601 1.2548 -0.1588 0.2075 -0.0488 -0.0424 -0.4633 0.4043 0.2581 0.1634 -0.0675 'X-RAY DIFFRACTION' 3 ? refined 27.4978 28.4507 18.9520 -0.1504 -0.1469 -0.1894 0.0042 -0.0064 0.0020 3.1468 3.2599 1.1013 0.7234 0.4461 0.3729 0.0229 -0.0341 0.0112 0.0110 -0.0361 -0.0138 0.0466 -0.0295 0.0142 'X-RAY DIFFRACTION' 4 ? refined 12.5601 26.7831 18.3493 -0.1670 -0.1753 -0.1615 0.0219 0.0246 0.0265 4.7958 4.6843 2.0939 -1.2229 0.9500 0.1364 0.1172 -0.0149 -0.1023 -0.0170 -0.1768 0.1904 -0.0162 -0.0647 0.0246 'X-RAY DIFFRACTION' 5 ? refined 38.7422 30.4700 24.0359 -0.1601 -0.1890 -0.1022 0.0095 -0.0766 0.0526 18.0123 7.8939 8.2011 0.7569 -7.2930 1.6741 -0.3080 0.1945 0.1135 -0.5069 -0.3565 -0.6515 -0.0187 0.2250 0.5006 'X-RAY DIFFRACTION' 6 ? refined 1.4916 21.5948 17.7172 -0.2340 -0.1755 0.0066 -0.0160 0.0204 0.0055 31.2240 6.3321 6.9261 -13.3467 0.5315 1.8554 -0.1543 0.0034 0.1510 -0.4828 -1.0561 0.5653 0.0853 0.1143 -0.5153 'X-RAY DIFFRACTION' 7 ? refined 39.5354 31.4696 10.5877 -0.1930 -0.1531 -0.1069 -0.0083 -0.0166 0.0434 6.0523 7.0408 7.6447 -2.0484 -1.5928 4.4492 0.3161 0.0627 -0.3787 -0.0175 -0.0087 -0.5816 -0.0085 -0.3277 0.4824 'X-RAY DIFFRACTION' 8 ? refined 0.6631 34.8942 13.9219 -0.2142 -0.1205 -0.1680 -0.0065 0.0105 0.0997 11.9789 10.1524 3.2621 -2.3062 -1.2532 2.3311 0.1813 -0.0492 -0.1321 0.1755 0.2265 0.5534 0.0939 0.0767 -0.4435 'X-RAY DIFFRACTION' 9 ? refined 27.4272 31.0625 4.5570 -0.1553 -0.1525 -0.1897 0.0067 -0.0047 -0.0030 20.5700 0.6364 2.4147 -2.7219 -3.3918 -0.0532 -0.0086 -0.1011 0.1097 0.1752 0.0258 -0.0228 -0.0855 0.0044 -0.0678 'X-RAY DIFFRACTION' 10 ? refined 12.8062 39.4333 11.5890 -0.1532 -0.1283 -0.1489 0.0168 -0.0063 0.0062 15.7364 4.0781 2.3721 -3.4534 -3.9348 -1.2835 0.2348 0.0656 -0.3004 0.2731 0.0661 0.2585 -0.1180 -0.1382 -0.0222 'X-RAY DIFFRACTION' 11 ? refined 29.1064 33.1157 14.7288 -0.1709 -0.1512 -0.1604 -0.0109 -0.0182 0.0070 1.2773 7.2666 3.2077 0.6062 -1.2455 -2.1661 0.0352 -0.0641 0.0289 0.0608 0.2008 0.2111 0.1566 -0.2342 -0.0333 'X-RAY DIFFRACTION' 12 ? refined 10.3464 29.3843 12.5187 -0.1478 -0.1402 -0.1551 0.0260 -0.0116 0.0170 7.9315 11.0491 6.2481 -5.6331 6.3023 -7.4328 0.2873 -0.0502 -0.2371 0.2163 -0.0362 0.2265 -0.2818 0.3769 0.1052 'X-RAY DIFFRACTION' 13 ? refined 28.8284 19.8151 19.4139 -0.1415 -0.1559 -0.1170 0.0144 0.0124 -0.0069 4.4627 2.1596 2.2312 0.0749 0.7485 -0.1123 -0.0769 -0.0846 0.1614 -0.0344 -0.1226 -0.0405 -0.0338 -0.1097 0.0986 'X-RAY DIFFRACTION' 14 ? refined 11.4130 28.3770 26.8540 -0.1400 -0.1017 -0.1575 0.0348 0.0378 0.0251 1.6841 3.7882 3.4173 -2.3303 -0.8859 -0.0641 -0.3113 0.2272 0.0841 -0.3406 -0.0986 0.2747 -0.1176 0.0082 -0.0773 'X-RAY DIFFRACTION' 15 ? refined 39.0483 23.6767 10.5499 -0.2473 -0.1179 -0.0818 0.0217 0.0538 0.0586 1.1599 13.2478 22.2390 -2.6031 0.6739 -14.2324 0.0529 -0.7543 0.7013 0.1790 -0.4179 -0.5304 -0.3903 0.4450 0.7654 'X-RAY DIFFRACTION' 16 ? refined 1.2708 36.3374 21.0353 -0.2264 -0.1807 -0.0701 0.0988 0.0328 0.0201 10.0294 14.4976 23.3779 11.5967 -8.2939 -13.8307 0.5959 0.1488 -0.7447 -0.1580 0.6354 0.3450 0.4620 -0.4365 -0.1853 'X-RAY DIFFRACTION' 17 ? refined 36.9384 24.4412 23.8982 -0.1880 -0.2478 -0.0847 -0.0128 -0.1021 0.0071 22.9048 11.5587 19.9921 1.7351 -12.6320 -1.7292 0.0309 0.2411 -0.2720 -0.0320 0.9391 -0.2489 0.5574 -0.2324 0.0574 'X-RAY DIFFRACTION' 18 ? refined 3.0398 23.1213 23.6806 -0.2171 -0.1798 -0.1216 0.0228 0.0659 0.0322 41.0642 39.6402 15.9989 -31.3606 3.9720 3.5681 0.1091 -0.4067 0.2976 1.1319 -0.1227 -0.1609 -0.0900 0.7459 0.4671 'X-RAY DIFFRACTION' 19 ? refined 35.7947 22.1662 17.3736 -0.1735 -0.1856 -0.1276 -0.0033 0.0030 0.0155 2.3092 2.0760 8.2440 -0.5355 2.9337 -1.2118 -0.1333 -0.2370 0.3703 0.0849 0.0128 -0.4146 0.0390 0.0543 0.0908 'X-RAY DIFFRACTION' 20 ? refined 4.0247 29.4609 24.6860 -0.2225 -0.1451 -0.0638 0.0437 0.0173 0.0567 1.5477 11.6019 11.4541 2.6004 -4.0911 -9.0249 0.0784 0.0841 -0.1625 -0.2108 0.0119 0.7506 -0.1223 0.0370 0.1524 'X-RAY DIFFRACTION' 21 ? refined 19.1696 29.7545 12.7843 -0.0560 -0.0543 -0.1104 0.0092 -0.0067 0.0002 4.3441 12.5001 13.5233 -2.6529 -3.6488 7.4319 0.0775 -0.0643 -0.0132 0.2646 0.0669 0.1569 -0.3168 -0.1848 0.0845 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 5 ? . . . . ? 'X-RAY DIFFRACTION' 2 1 A 94 A 99 ? . . . . ? 'X-RAY DIFFRACTION' 3 1 A 6 A 10 ? . . . . ? 'X-RAY DIFFRACTION' 4 2 B 1 B 5 ? . . . . ? 'X-RAY DIFFRACTION' 5 2 B 94 B 99 ? . . . . ? 'X-RAY DIFFRACTION' 6 2 B 6 B 10 ? . . . . ? 'X-RAY DIFFRACTION' 7 3 A 20 A 32 ? . . . . ? 'X-RAY DIFFRACTION' 8 4 B 20 B 32 ? . . . . ? 'X-RAY DIFFRACTION' 9 5 A 11 A 19 ? . . . . ? 'X-RAY DIFFRACTION' 10 6 B 11 B 19 ? . . . . ? 'X-RAY DIFFRACTION' 11 7 A 33 A 43 ? . . . . ? 'X-RAY DIFFRACTION' 12 8 B 33 B 43 ? . . . . ? 'X-RAY DIFFRACTION' 13 9 A 44 A 57 ? . . . . ? 'X-RAY DIFFRACTION' 14 10 B 44 B 57 ? . . . . ? 'X-RAY DIFFRACTION' 15 11 A 77 A 85 ? . . . . ? 'X-RAY DIFFRACTION' 16 12 B 77 B 85 ? . . . . ? 'X-RAY DIFFRACTION' 17 13 A 86 A 93 ? . . . . ? 'X-RAY DIFFRACTION' 18 14 B 86 B 93 ? . . . . ? 'X-RAY DIFFRACTION' 19 15 A 58 A 62 ? . . . . ? 'X-RAY DIFFRACTION' 20 16 B 58 B 62 ? . . . . ? 'X-RAY DIFFRACTION' 21 17 A 63 A 68 ? . . . . ? 'X-RAY DIFFRACTION' 22 18 B 63 B 68 ? . . . . ? 'X-RAY DIFFRACTION' 23 19 A 69 A 76 ? . . . . ? 'X-RAY DIFFRACTION' 24 20 B 69 B 76 ? . . . . ? 'X-RAY DIFFRACTION' 25 21 A 200 A 200 ? . . . . ? # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 REFMAC 5.2.0005 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 3 PDB_EXTRACT 3.006 'June 11, 2008' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 AMoRE . ? ? ? ? phasing ? ? ? 5 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 7 ? CG ? A LYS 7 CG 2 1 Y 1 A LYS 7 ? CD ? A LYS 7 CD 3 1 Y 1 A LYS 7 ? CE ? A LYS 7 CE 4 1 Y 1 A LYS 7 ? NZ ? A LYS 7 NZ 5 1 Y 1 A LYS 41 ? CG ? A LYS 41 CG 6 1 Y 1 A LYS 41 ? CD ? A LYS 41 CD 7 1 Y 1 A LYS 41 ? CE ? A LYS 41 CE 8 1 Y 1 A LYS 41 ? NZ ? A LYS 41 NZ 9 1 Y 1 A LYS 43 ? CG ? A LYS 43 CG 10 1 Y 1 A LYS 43 ? CD ? A LYS 43 CD 11 1 Y 1 A LYS 43 ? CE ? A LYS 43 CE 12 1 Y 1 A LYS 43 ? NZ ? A LYS 43 NZ 13 1 Y 1 A LYS 70 ? CG ? A LYS 70 CG 14 1 Y 1 A LYS 70 ? CD ? A LYS 70 CD 15 1 Y 1 A LYS 70 ? CE ? A LYS 70 CE 16 1 Y 1 A LYS 70 ? NZ ? A LYS 70 NZ 17 1 Y 1 B LYS 41 ? CG ? B LYS 41 CG 18 1 Y 1 B LYS 41 ? CD ? B LYS 41 CD 19 1 Y 1 B LYS 41 ? CE ? B LYS 41 CE 20 1 Y 1 B LYS 41 ? NZ ? B LYS 41 NZ # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;(5S)-3-(3-Acetylphenyl)-N-[(1S,2R)-3-[(1,3-benzodioxol-5-ylsulfonyl)(2-methylpropyl)amino]-2-hydroxy-1-(phenylmethyl)pr opyl]-2-oxo-5-oxazolidinecarboxamide ; K62 3 'PHOSPHATE ION' PO4 4 water HOH #