HEADER TRANSFERASE 05-MAR-09 3GIE TITLE CRYSTAL STRUCTURE OF DESKC_H188E IN COMPLEX WITH AMP-PCP COMPND MOL_ID: 1; COMPND 2 MOLECULE: SENSOR HISTIDINE KINASE DESK; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: ENTIRE CYTOPLASMIC REGION; COMPND 5 EC: 2.7.13.3; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: YOCF; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PQE32 KEYWDS FOUR-HELIX BUNDLE, GHL ATPASE DOMAIN, CELL MEMBRANE, KINASE, KEYWDS 2 MEMBRANE, PHOSPHOPROTEIN, TRANSFERASE, TRANSMEMBRANE, TWO-COMPONENT KEYWDS 3 REGULATORY SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR F.TRAJTENBERG,D.ALBANESI,P.M.ALZARI,A.BUSCHIAZZO,D.DE MENDOZA REVDAT 5 01-NOV-23 3GIE 1 REMARK SEQADV LINK REVDAT 4 18-FEB-15 3GIE 1 REMARK VERSN REVDAT 3 08-SEP-10 3GIE 1 MTRIX1 MTRIX2 MTRIX3 REVDAT 2 03-NOV-09 3GIE 1 JRNL MTRIX1 MTRIX2 MTRIX3 REVDAT 1 15-SEP-09 3GIE 0 JRNL AUTH D.ALBANESI,M.MARTIN,F.TRAJTENBERG,M.C.MANSILLA,A.HAOUZ, JRNL AUTH 2 P.M.ALZARI,D.DE MENDOZA,A.BUSCHIAZZO JRNL TITL STRUCTURAL PLASTICITY AND CATALYSIS REGULATION OF A JRNL TITL 2 THERMOSENSOR HISTIDINE KINASE JRNL REF PROC.NATL.ACAD.SCI.USA V. 106 16185 2009 JRNL REFN ISSN 0027-8424 JRNL PMID 19805278 JRNL DOI 10.1073/PNAS.0906699106 REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 2009_02_15_2320_3 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.17 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 11757 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.330 REMARK 3 FREE R VALUE TEST SET COUNT : 1097 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 25.6700 - 5.2880 0.87 1344 140 0.1640 0.2140 REMARK 3 2 5.2880 - 4.2030 0.89 1340 142 0.1610 0.2190 REMARK 3 3 4.2030 - 3.6730 0.90 1355 136 0.1830 0.2180 REMARK 3 4 3.6730 - 3.3380 0.89 1329 145 0.2050 0.2660 REMARK 3 5 3.3380 - 3.0990 0.89 1350 135 0.2380 0.3000 REMARK 3 6 3.0990 - 2.9170 0.89 1325 126 0.2480 0.2950 REMARK 3 7 2.9170 - 2.7710 0.89 1323 120 0.2740 0.3280 REMARK 3 8 2.7710 - 2.6510 0.88 1306 132 0.2720 0.2930 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.29 REMARK 3 B_SOL : 81.21 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.990 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 98.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -19.66100 REMARK 3 B22 (A**2) : -3.13400 REMARK 3 B33 (A**2) : -11.62600 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 5.84900 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.5280 REMARK 3 OPERATOR: -H,-K,L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3678 REMARK 3 ANGLE : 1.440 4566 REMARK 3 CHIRALITY : 0.085 529 REMARK 3 PLANARITY : 0.004 575 REMARK 3 DIHEDRAL : 22.597 1347 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESSEQ 155:240) OR (CHAIN B AND RESSEQ REMARK 3 155:240) REMARK 3 ORIGIN FOR THE GROUP (A): 22.6505 0.6404 11.1016 REMARK 3 T TENSOR REMARK 3 T11: 0.1867 T22: 0.2429 REMARK 3 T33: 0.2797 T12: -0.0815 REMARK 3 T13: 0.0006 T23: 0.0781 REMARK 3 L TENSOR REMARK 3 L11: 0.0372 L22: 0.0946 REMARK 3 L33: 0.2776 L12: 0.0206 REMARK 3 L13: 0.0245 L23: 0.3194 REMARK 3 S TENSOR REMARK 3 S11: 0.0070 S12: -0.1219 S13: -0.1320 REMARK 3 S21: -0.0764 S22: -0.0275 S23: -0.1847 REMARK 3 S31: -0.0739 S32: -0.1072 S33: -0.0008 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESSEQ 245:366 REMARK 3 ORIGIN FOR THE GROUP (A): 38.8987 -22.6395 5.6627 REMARK 3 T TENSOR REMARK 3 T11: 0.5832 T22: 0.1468 REMARK 3 T33: 0.6418 T12: 0.0642 REMARK 3 T13: -0.2599 T23: -0.1731 REMARK 3 L TENSOR REMARK 3 L11: 0.0651 L22: 0.0642 REMARK 3 L33: 0.0534 L12: 0.0301 REMARK 3 L13: -0.0415 L23: -0.0516 REMARK 3 S TENSOR REMARK 3 S11: -0.1333 S12: -0.0830 S13: 0.2680 REMARK 3 S21: -0.0349 S22: 0.1160 S23: 0.2055 REMARK 3 S31: -0.1147 S32: -0.2665 S33: -0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN B AND RESSEQ 245:366 REMARK 3 ORIGIN FOR THE GROUP (A): 38.5051 23.0376 17.8155 REMARK 3 T TENSOR REMARK 3 T11: 0.7414 T22: 0.2662 REMARK 3 T33: 0.6673 T12: -0.2049 REMARK 3 T13: 0.3492 T23: -0.3449 REMARK 3 L TENSOR REMARK 3 L11: 0.0596 L22: 0.0594 REMARK 3 L33: 0.1049 L12: -0.0263 REMARK 3 L13: 0.0364 L23: -0.1382 REMARK 3 S TENSOR REMARK 3 S11: -0.4985 S12: 0.1832 S13: -0.4783 REMARK 3 S21: 0.0409 S22: -0.2988 S23: 0.0860 REMARK 3 S31: -0.0370 S32: -0.0209 S33: -0.0015 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 245:326 OR RESSEQ REMARK 3 336:366 ) REMARK 3 SELECTION : CHAIN B AND (RESSEQ 245:366 ) REMARK 3 ATOM PAIRS NUMBER : 895 REMARK 3 RMSD : 0.024 REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND (RESSEQ 183:234 ) REMARK 3 SELECTION : CHAIN B AND (RESSEQ 183:234 ) REMARK 3 ATOM PAIRS NUMBER : 408 REMARK 3 RMSD : 0.066 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B ANISOU REMARK 3 RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 4 REMARK 4 3GIE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1000051898. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-SEP-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MULTILAYER MIRRORS (VARIMAX-HF) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11757 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : 27.165 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3EHG AND 3EHF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MPD, MGCL2, HEPES, AMP-PCP, PH 6, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 49.94500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.02500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 49.94500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 47.02500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 2 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 3 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 242 REMARK 465 GLY A 243 REMARK 465 ILE A 244 REMARK 465 GLU A 327 REMARK 465 GLU A 328 REMARK 465 ASN A 329 REMARK 465 SER A 330 REMARK 465 PHE A 331 REMARK 465 SER A 332 REMARK 465 LYS A 333 REMARK 465 GLY A 334 REMARK 465 HIS A 335 REMARK 465 ASN A 367 REMARK 465 ASN A 368 REMARK 465 SER A 369 REMARK 465 LYS A 370 REMARK 465 GLY B 153 REMARK 465 ARG B 154 REMARK 465 GLY B 243 REMARK 465 ASN B 367 REMARK 465 ASN B 368 REMARK 465 SER B 369 REMARK 465 LYS B 370 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS B 335 CG ND1 CD2 CE1 NE2 REMARK 470 LEU B 337 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ILE B 244 OD1 ASN B 281 2.05 REMARK 500 O ARG A 154 CB GLU A 158 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 164 CA - CB - CG ANGL. DEV. = -14.1 DEGREES REMARK 500 LEU A 164 CB - CG - CD2 ANGL. DEV. = -15.0 DEGREES REMARK 500 ARG A 185 NE - CZ - NH1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG A 185 NE - CZ - NH2 ANGL. DEV. = -5.9 DEGREES REMARK 500 ARG B 185 CD - NE - CZ ANGL. DEV. = 8.5 DEGREES REMARK 500 ARG B 185 NE - CZ - NH1 ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG B 185 NE - CZ - NH2 ANGL. DEV. = 5.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 163 -9.48 -49.78 REMARK 500 GLU A 178 37.90 -95.46 REMARK 500 LEU A 187 -73.33 -48.96 REMARK 500 GLU A 188 -53.55 -29.53 REMARK 500 ASP A 189 -85.21 -79.36 REMARK 500 ILE A 209 -63.32 -22.94 REMARK 500 ARG A 228 -73.37 -48.97 REMARK 500 GLU A 269 -151.72 -129.34 REMARK 500 ASN A 274 63.49 -69.78 REMARK 500 HIS A 297 -52.82 -131.49 REMARK 500 TRP A 311 -136.63 54.77 REMARK 500 ALA A 347 31.33 -92.77 REMARK 500 ASN A 348 61.79 24.68 REMARK 500 ARG B 180 -71.91 -42.98 REMARK 500 LEU B 187 -73.78 -49.16 REMARK 500 GLU B 188 -52.60 -29.53 REMARK 500 ASP B 189 -85.04 -79.57 REMARK 500 ILE B 209 -62.16 -24.88 REMARK 500 ARG B 228 -72.19 -50.02 REMARK 500 SER B 240 6.21 -55.26 REMARK 500 GLU B 269 -151.65 -128.88 REMARK 500 HIS B 297 -53.35 -130.61 REMARK 500 TRP B 311 -136.30 55.33 REMARK 500 GLU B 328 -9.55 -53.35 REMARK 500 SER B 330 -52.63 -25.77 REMARK 500 PHE B 331 93.76 -40.91 REMARK 500 LYS B 333 123.94 -36.30 REMARK 500 HIS B 335 -137.93 -135.16 REMARK 500 ALA B 347 30.73 -91.50 REMARK 500 ASN B 348 61.81 24.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 1 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 289 OE2 REMARK 620 2 ASN A 293 OD1 66.8 REMARK 620 3 ACP A1303 O3G 81.6 137.2 REMARK 620 4 ACP A1303 O2B 159.7 97.2 104.9 REMARK 620 5 ACP A1303 O1A 117.0 106.4 113.5 78.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 1 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 289 OE2 REMARK 620 2 ASN B 293 OD1 66.7 REMARK 620 3 ASN B 293 ND2 95.5 59.6 REMARK 620 4 ACP B1303 O3G 96.6 154.6 144.4 REMARK 620 5 ACP B1303 O2B 130.8 94.4 113.8 82.1 REMARK 620 6 ACP B1303 O1A 156.7 132.0 86.5 69.8 67.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACP A 1303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACP B 1303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3GIF RELATED DB: PDB REMARK 900 RELATED ID: 3GIG RELATED DB: PDB DBREF 3GIE A 154 370 UNP O34757 DESK_BACSU 154 370 DBREF 3GIE B 154 370 UNP O34757 DESK_BACSU 154 370 SEQADV 3GIE GLY A 153 UNP O34757 EXPRESSION TAG SEQADV 3GIE GLU A 188 UNP O34757 HIS 188 ENGINEERED MUTATION SEQADV 3GIE GLY B 153 UNP O34757 EXPRESSION TAG SEQADV 3GIE GLU B 188 UNP O34757 HIS 188 ENGINEERED MUTATION SEQRES 1 A 218 GLY ARG LYS GLU ARG GLU ARG LEU GLU GLU LYS LEU GLU SEQRES 2 A 218 ASP ALA ASN GLU ARG ILE ALA GLU LEU VAL LYS LEU GLU SEQRES 3 A 218 GLU ARG GLN ARG ILE ALA ARG ASP LEU GLU ASP THR LEU SEQRES 4 A 218 GLY GLN LYS LEU SER LEU ILE GLY LEU LYS SER ASP LEU SEQRES 5 A 218 ALA ARG LYS LEU ILE TYR LYS ASP PRO GLU GLN ALA ALA SEQRES 6 A 218 ARG GLU LEU LYS SER VAL GLN GLN THR ALA ARG THR SER SEQRES 7 A 218 LEU ASN GLU VAL ARG LYS ILE VAL SER SER MET LYS GLY SEQRES 8 A 218 ILE ARG LEU LYS ASP GLU LEU ILE ASN ILE LYS GLN ILE SEQRES 9 A 218 LEU GLU ALA ALA ASP ILE MET PHE ILE TYR GLU GLU GLU SEQRES 10 A 218 LYS TRP PRO GLU ASN ILE SER LEU LEU ASN GLU ASN ILE SEQRES 11 A 218 LEU SER MET CYS LEU LYS GLU ALA VAL THR ASN VAL VAL SEQRES 12 A 218 LYS HIS SER GLN ALA LYS THR CYS ARG VAL ASP ILE GLN SEQRES 13 A 218 GLN LEU TRP LYS GLU VAL VAL ILE THR VAL SER ASP ASP SEQRES 14 A 218 GLY THR PHE LYS GLY GLU GLU ASN SER PHE SER LYS GLY SEQRES 15 A 218 HIS GLY LEU LEU GLY MET ARG GLU ARG LEU GLU PHE ALA SEQRES 16 A 218 ASN GLY SER LEU HIS ILE ASP THR GLU ASN GLY THR LYS SEQRES 17 A 218 LEU THR MET ALA ILE PRO ASN ASN SER LYS SEQRES 1 B 218 GLY ARG LYS GLU ARG GLU ARG LEU GLU GLU LYS LEU GLU SEQRES 2 B 218 ASP ALA ASN GLU ARG ILE ALA GLU LEU VAL LYS LEU GLU SEQRES 3 B 218 GLU ARG GLN ARG ILE ALA ARG ASP LEU GLU ASP THR LEU SEQRES 4 B 218 GLY GLN LYS LEU SER LEU ILE GLY LEU LYS SER ASP LEU SEQRES 5 B 218 ALA ARG LYS LEU ILE TYR LYS ASP PRO GLU GLN ALA ALA SEQRES 6 B 218 ARG GLU LEU LYS SER VAL GLN GLN THR ALA ARG THR SER SEQRES 7 B 218 LEU ASN GLU VAL ARG LYS ILE VAL SER SER MET LYS GLY SEQRES 8 B 218 ILE ARG LEU LYS ASP GLU LEU ILE ASN ILE LYS GLN ILE SEQRES 9 B 218 LEU GLU ALA ALA ASP ILE MET PHE ILE TYR GLU GLU GLU SEQRES 10 B 218 LYS TRP PRO GLU ASN ILE SER LEU LEU ASN GLU ASN ILE SEQRES 11 B 218 LEU SER MET CYS LEU LYS GLU ALA VAL THR ASN VAL VAL SEQRES 12 B 218 LYS HIS SER GLN ALA LYS THR CYS ARG VAL ASP ILE GLN SEQRES 13 B 218 GLN LEU TRP LYS GLU VAL VAL ILE THR VAL SER ASP ASP SEQRES 14 B 218 GLY THR PHE LYS GLY GLU GLU ASN SER PHE SER LYS GLY SEQRES 15 B 218 HIS GLY LEU LEU GLY MET ARG GLU ARG LEU GLU PHE ALA SEQRES 16 B 218 ASN GLY SER LEU HIS ILE ASP THR GLU ASN GLY THR LYS SEQRES 17 B 218 LEU THR MET ALA ILE PRO ASN ASN SER LYS HET ACP A1303 31 HET MG A 1 1 HET ACP B1303 31 HET MG B 1 1 HETNAM ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER HETNAM MG MAGNESIUM ION HETSYN ACP ADENOSINE-5'-[BETA, GAMMA-METHYLENE]TRIPHOSPHATE FORMUL 3 ACP 2(C11 H18 N5 O12 P3) FORMUL 4 MG 2(MG 2+) FORMUL 7 HOH *3(H2 O) HELIX 1 1 LYS A 155 ILE A 209 1 55 HELIX 2 2 ASP A 212 MET A 241 1 30 HELIX 3 3 ARG A 245 ASP A 261 1 17 HELIX 4 4 SER A 276 HIS A 297 1 22 HELIX 5 5 GLY A 336 PHE A 346 1 11 HELIX 6 6 GLU B 156 ILE B 209 1 54 HELIX 7 7 ASP B 212 SER B 240 1 29 HELIX 8 8 ARG B 245 ASP B 261 1 17 HELIX 9 9 SER B 276 HIS B 297 1 22 HELIX 10 10 HIS B 335 ALA B 347 1 13 SHEET 1 A 5 MET A 263 ILE A 265 0 SHEET 2 A 5 THR A 302 LEU A 310 1 O CYS A 303 N MET A 263 SHEET 3 A 5 GLU A 313 ASP A 320 -1 O THR A 317 N ASP A 306 SHEET 4 A 5 THR A 359 ILE A 365 -1 O THR A 359 N ASP A 320 SHEET 5 A 5 SER A 350 ASP A 354 -1 N SER A 350 O ALA A 364 SHEET 1 B 5 MET B 263 ILE B 265 0 SHEET 2 B 5 THR B 302 LEU B 310 1 O CYS B 303 N MET B 263 SHEET 3 B 5 GLU B 313 ASP B 320 -1 O THR B 317 N ASP B 306 SHEET 4 B 5 THR B 359 ILE B 365 -1 O THR B 359 N ASP B 320 SHEET 5 B 5 SER B 350 ASP B 354 -1 N SER B 350 O ALA B 364 LINK MG MG A 1 OE2 GLU A 289 1555 1555 2.04 LINK MG MG A 1 OD1 ASN A 293 1555 1555 2.05 LINK MG MG A 1 O3G ACP A1303 1555 1555 2.05 LINK MG MG A 1 O2B ACP A1303 1555 1555 2.05 LINK MG MG A 1 O1A ACP A1303 1555 1555 2.05 LINK MG MG B 1 OE2 GLU B 289 1555 1555 2.05 LINK MG MG B 1 OD1 ASN B 293 1555 1555 2.06 LINK MG MG B 1 ND2 ASN B 293 1555 1555 2.44 LINK MG MG B 1 O3G ACP B1303 1555 1555 2.05 LINK MG MG B 1 O2B ACP B1303 1555 1555 2.05 LINK MG MG B 1 O1A ACP B1303 1555 1555 2.06 SITE 1 AC1 11 MG A 1 GLU A 289 ASN A 293 VAL A 294 SITE 2 AC1 11 HIS A 297 SER A 298 THR A 323 PHE A 324 SITE 3 AC1 11 LYS A 325 GLY A 336 LEU A 337 SITE 1 AC2 3 GLU A 289 ASN A 293 ACP A1303 SITE 1 AC3 13 MG B 1 GLU B 289 ASN B 293 HIS B 297 SITE 2 AC3 13 SER B 298 THR B 323 PHE B 324 LYS B 325 SITE 3 AC3 13 SER B 330 SER B 332 HIS B 335 GLY B 336 SITE 4 AC3 13 LEU B 337 SITE 1 AC4 3 GLU B 289 ASN B 293 ACP B1303 CRYST1 99.890 94.050 44.620 90.00 90.02 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010011 0.000000 0.000003 0.00000 SCALE2 0.000000 0.010633 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022411 0.00000 MTRIX1 1 0.999857 -0.016309 -0.004363 0.43038 1 MTRIX2 1 -0.016219 -0.999669 0.019956 1.23527 1 MTRIX3 1 -0.004687 -0.019882 -0.999791 23.01530 1 MTRIX1 2 0.999663 -0.020196 0.016336 -0.29563 1 MTRIX2 2 -0.019919 -0.999657 -0.016981 1.69987 1 MTRIX3 2 0.016673 0.016650 -0.999722 22.11890 1