HEADER METAL BINDING PROTEIN 09-MAR-09 3GK2 TITLE X-RAY STRUCTURE OF BOVINE SBI279,CA(2+)-S100B COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN S100-B; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: S100 CALCIUM-BINDING PROTEIN B, S-100 PROTEIN SUBUNIT BETA, COMPND 5 S-100 PROTEIN BETA CHAIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: BOVINE,COW,DOMESTIC CATTLE,DOMESTIC COW; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 GENE: S100B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET11B KEYWDS EF HAND, ALPHA HELICAL, METAL-BINDING, NUCLEUS, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.H.CHARPENTIER,D.J.WEBER,E.A.TOTH REVDAT 5 06-SEP-23 3GK2 1 REMARK REVDAT 4 01-NOV-17 3GK2 1 REMARK REVDAT 3 13-JUL-11 3GK2 1 VERSN REVDAT 2 09-JUN-10 3GK2 1 JRNL REVDAT 1 09-JUN-09 3GK2 0 JRNL AUTH T.H.CHARPENTIER,P.T.WILDER,M.A.LIRIANO,K.M.VARNEY,S.ZHONG, JRNL AUTH 2 A.COOP,E.POZHARSKI,A.D.MACKERELL,E.A.TOTH,D.J.WEBER JRNL TITL SMALL MOLECULES BOUND TO UNIQUE SITES IN THE TARGET PROTEIN JRNL TITL 2 BINDING CLEFT OF CALCIUM-BOUND S100B AS CHARACTERIZED BY JRNL TITL 3 NUCLEAR MAGNETIC RESONANCE AND X-RAY CRYSTALLOGRAPHY. JRNL REF BIOCHEMISTRY V. 48 6202 2009 JRNL REFN ISSN 0006-2960 JRNL PMID 19469484 JRNL DOI 10.1021/BI9005754 REMARK 2 REMARK 2 RESOLUTION. 1.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.60 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.2 REMARK 3 NUMBER OF REFLECTIONS : 6284 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.227 REMARK 3 FREE R VALUE : 0.281 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 291 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.98 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.04 REMARK 3 REFLECTION IN BIN (WORKING SET) : 285 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 59.88 REMARK 3 BIN R VALUE (WORKING SET) : 0.3210 REMARK 3 BIN FREE R VALUE SET COUNT : 9 REMARK 3 BIN FREE R VALUE : 0.4860 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 710 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 26 REMARK 3 SOLVENT ATOMS : 33 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.54000 REMARK 3 B22 (A**2) : -2.17000 REMARK 3 B33 (A**2) : -0.37000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.239 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.207 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.176 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 15.929 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 745 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 997 ; 1.525 ; 1.986 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 87 ; 3.813 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 39 ;34.278 ;26.410 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 140 ;12.547 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 1 ;10.855 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 107 ; 0.058 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 561 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 305 ; 0.193 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 509 ; 0.293 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 29 ; 0.110 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 7 ; 0.092 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 41 ; 0.195 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.070 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 450 ; 0.100 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 698 ; 0.159 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 326 ; 0.316 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 299 ; 0.518 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 5 REMARK 3 ORIGIN FOR THE GROUP (A): -3.1300 -5.6095 -2.5475 REMARK 3 T TENSOR REMARK 3 T11: -0.1366 T22: -0.1165 REMARK 3 T33: 0.0335 T12: 0.0424 REMARK 3 T13: -0.0589 T23: -0.0574 REMARK 3 L TENSOR REMARK 3 L11: 6.6647 L22: 62.8445 REMARK 3 L33: 37.5394 L12: 6.2364 REMARK 3 L13: 13.0848 L23: -13.7471 REMARK 3 S TENSOR REMARK 3 S11: -0.0570 S12: -0.3232 S13: 0.5791 REMARK 3 S21: 0.3749 S22: 0.4669 S23: 2.5121 REMARK 3 S31: -0.0982 S32: -1.7425 S33: -0.4099 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 6 A 16 REMARK 3 ORIGIN FOR THE GROUP (A): 1.7523 5.8113 -6.7006 REMARK 3 T TENSOR REMARK 3 T11: 0.0669 T22: -0.1586 REMARK 3 T33: -0.1943 T12: 0.0562 REMARK 3 T13: -0.0819 T23: -0.0233 REMARK 3 L TENSOR REMARK 3 L11: 3.6248 L22: 51.1012 REMARK 3 L33: 1.0544 L12: 13.3126 REMARK 3 L13: -1.9547 L23: -7.1557 REMARK 3 S TENSOR REMARK 3 S11: -0.2919 S12: 0.3671 S13: 0.0347 REMARK 3 S21: -0.4803 S22: 0.4607 S23: 0.6822 REMARK 3 S31: -0.6324 S32: -0.8096 S33: -0.1688 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 17 A 40 REMARK 3 ORIGIN FOR THE GROUP (A): 5.5472 16.7001 -4.8596 REMARK 3 T TENSOR REMARK 3 T11: -0.0207 T22: -0.2199 REMARK 3 T33: -0.2012 T12: 0.0610 REMARK 3 T13: -0.0180 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 7.8439 L22: 6.8392 REMARK 3 L33: 9.9287 L12: -0.2828 REMARK 3 L13: -2.9270 L23: 0.2941 REMARK 3 S TENSOR REMARK 3 S11: -0.0372 S12: 0.4562 S13: 0.4186 REMARK 3 S21: -0.8963 S22: 0.0070 S23: 0.1919 REMARK 3 S31: -0.4163 S32: -0.0556 S33: 0.0302 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 41 A 63 REMARK 3 ORIGIN FOR THE GROUP (A): 10.6057 17.4761 5.4754 REMARK 3 T TENSOR REMARK 3 T11: -0.1286 T22: -0.1420 REMARK 3 T33: -0.1713 T12: 0.0207 REMARK 3 T13: -0.0257 T23: 0.0245 REMARK 3 L TENSOR REMARK 3 L11: 7.8121 L22: 7.9720 REMARK 3 L33: 5.5609 L12: 2.1654 REMARK 3 L13: -2.6962 L23: 1.0151 REMARK 3 S TENSOR REMARK 3 S11: 0.2585 S12: -0.5317 S13: 0.0571 REMARK 3 S21: 0.2637 S22: -0.2202 S23: -0.2965 REMARK 3 S31: -0.3990 S32: 0.0553 S33: -0.0383 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 64 A 78 REMARK 3 ORIGIN FOR THE GROUP (A): 12.9293 8.8272 -3.5180 REMARK 3 T TENSOR REMARK 3 T11: -0.0981 T22: -0.2291 REMARK 3 T33: -0.1139 T12: 0.0060 REMARK 3 T13: 0.0708 T23: -0.0508 REMARK 3 L TENSOR REMARK 3 L11: 4.7496 L22: 12.2918 REMARK 3 L33: 10.8198 L12: 1.4604 REMARK 3 L13: -1.0465 L23: -5.7175 REMARK 3 S TENSOR REMARK 3 S11: 0.0256 S12: 0.3079 S13: -0.2166 REMARK 3 S21: -0.8343 S22: 0.2935 S23: -0.3754 REMARK 3 S31: 0.1771 S32: 0.1794 S33: -0.3191 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 79 A 88 REMARK 3 ORIGIN FOR THE GROUP (A): 7.5998 1.7203 11.8054 REMARK 3 T TENSOR REMARK 3 T11: 0.0146 T22: -0.0268 REMARK 3 T33: -0.0522 T12: 0.0908 REMARK 3 T13: 0.0068 T23: -0.0656 REMARK 3 L TENSOR REMARK 3 L11: 3.6749 L22: 24.8003 REMARK 3 L33: 47.8040 L12: 9.4904 REMARK 3 L13: -11.0571 L23: -30.6121 REMARK 3 S TENSOR REMARK 3 S11: 0.1309 S12: -0.8092 S13: -0.1387 REMARK 3 S21: 1.2338 S22: 0.2675 S23: -0.2751 REMARK 3 S31: -0.5214 S32: -0.9075 S33: -0.3984 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 96 A 128 REMARK 3 ORIGIN FOR THE GROUP (A): 8.5968 15.3378 0.7777 REMARK 3 T TENSOR REMARK 3 T11: -0.0531 T22: -0.0802 REMARK 3 T33: -0.0127 T12: 0.0572 REMARK 3 T13: 0.0504 T23: -0.0004 REMARK 3 L TENSOR REMARK 3 L11: 1.5851 L22: 1.2662 REMARK 3 L33: 1.8063 L12: 0.6608 REMARK 3 L13: -0.0988 L23: 0.8411 REMARK 3 S TENSOR REMARK 3 S11: 0.1579 S12: -0.0311 S13: 0.0067 REMARK 3 S21: -0.1537 S22: -0.0191 S23: 0.0158 REMARK 3 S31: -0.1793 S32: 0.0046 S33: -0.1387 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3GK2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1000051958. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUL-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL7-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6299 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.984 REMARK 200 RESOLUTION RANGE LOW (A) : 45.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 27.8490 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.98 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 77.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.23300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1MHO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28% PEG3350, 7.5MM CACL2, 100MM REMARK 280 CACODYLATE BUFFER, PH 6.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 29.32450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 29.32450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 17.11200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 45.57900 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 17.11200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 45.57900 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 29.32450 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 17.11200 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 45.57900 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 29.32450 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 17.11200 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 45.57900 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -79.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 GLU A 89 REMARK 465 HIS A 90 REMARK 465 GLU A 91 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HIS A 42 C7 27A A 94 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 92 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 18 O REMARK 620 2 GLU A 21 O 100.1 REMARK 620 3 ASP A 23 O 77.9 89.2 REMARK 620 4 LYS A 26 O 85.3 168.2 81.6 REMARK 620 5 GLU A 31 OE1 92.9 108.6 161.2 81.3 REMARK 620 6 GLU A 31 OE2 74.4 71.3 142.4 120.4 45.7 REMARK 620 7 HOH A 121 O 177.2 80.5 99.4 93.7 89.6 108.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 93 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 61 OD1 REMARK 620 2 ASP A 63 OD1 83.5 REMARK 620 3 ASP A 65 OD1 86.8 83.6 REMARK 620 4 GLU A 67 O 86.8 164.9 84.3 REMARK 620 5 GLU A 72 OE1 114.3 114.2 153.0 80.5 REMARK 620 6 GLU A 72 OE2 88.4 71.4 154.9 120.0 48.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 92 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 93 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 27A A 94 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CAC A 95 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1MHO RELATED DB: PDB REMARK 900 THE 2.0 A STRUCTURE OF HOLO S100B FROM BOVINE BRAIN REMARK 900 RELATED ID: 3CR2 RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF BOVINE ZN(2+),CA(2+)-S100B REMARK 900 RELATED ID: 3CR4 RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF BOVINE PNT,CA(2+)-S100B REMARK 900 RELATED ID: 3CR5 RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF BOVINE PNT-ZN(2+),CA(2+)-S100B REMARK 900 RELATED ID: 1DT7 RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF THE C-TERMINAL NEGATIVE REGULATORY DOMAIN OF REMARK 900 P53 IN A COMPLEX WITH CA2+-BOUND S100B(BB) REMARK 900 RELATED ID: 3GK1 RELATED DB: PDB REMARK 900 RELATED ID: 3GK4 RELATED DB: PDB DBREF 3GK2 A 0 91 UNP P02638 S100B_BOVIN 1 92 SEQRES 1 A 92 MET SER GLU LEU GLU LYS ALA VAL VAL ALA LEU ILE ASP SEQRES 2 A 92 VAL PHE HIS GLN TYR SER GLY ARG GLU GLY ASP LYS HIS SEQRES 3 A 92 LYS LEU LYS LYS SER GLU LEU LYS GLU LEU ILE ASN ASN SEQRES 4 A 92 GLU LEU SER HIS PHE LEU GLU GLU ILE LYS GLU GLN GLU SEQRES 5 A 92 VAL VAL ASP LYS VAL MET GLU THR LEU ASP SER ASP GLY SEQRES 6 A 92 ASP GLY GLU CYS ASP PHE GLN GLU PHE MET ALA PHE VAL SEQRES 7 A 92 ALA MET ILE THR THR ALA CYS HIS GLU PHE PHE GLU HIS SEQRES 8 A 92 GLU HET CA A 92 1 HET CA A 93 1 HET 27A A 94 19 HET CAC A 95 5 HETNAM CA CALCIUM ION HETNAM 27A (Z)-2-[2-(4-METHYLPIPERAZIN-1-YL) HETNAM 2 27A BENZYL]DIAZENECARBOTHIOAMIDE HETNAM CAC CACODYLATE ION HETSYN CAC DIMETHYLARSINATE FORMUL 2 CA 2(CA 2+) FORMUL 4 27A C13 H19 N5 S FORMUL 5 CAC C2 H6 AS O2 1- FORMUL 6 HOH *33(H2 O) HELIX 1 1 SER A 1 GLY A 19 1 19 HELIX 2 2 LYS A 28 LEU A 40 1 13 HELIX 3 3 GLU A 49 ASP A 61 1 13 HELIX 4 4 ASP A 69 PHE A 88 1 20 LINK O SER A 18 CA CA A 92 1555 1555 2.41 LINK O GLU A 21 CA CA A 92 1555 1555 2.39 LINK O ASP A 23 CA CA A 92 1555 1555 2.35 LINK O LYS A 26 CA CA A 92 1555 1555 2.47 LINK OE1 GLU A 31 CA CA A 92 1555 1555 2.56 LINK OE2 GLU A 31 CA CA A 92 1555 1555 2.99 LINK OD1 ASP A 61 CA CA A 93 1555 1555 2.36 LINK OD1 ASP A 63 CA CA A 93 1555 1555 2.48 LINK OD1 ASP A 65 CA CA A 93 1555 1555 2.25 LINK O GLU A 67 CA CA A 93 1555 1555 2.31 LINK OE1 GLU A 72 CA CA A 93 1555 1555 2.55 LINK OE2 GLU A 72 CA CA A 93 1555 1555 2.77 LINK CA CA A 92 O HOH A 121 1555 1555 2.33 SITE 1 AC1 6 SER A 18 GLU A 21 ASP A 23 LYS A 26 SITE 2 AC1 6 GLU A 31 HOH A 121 SITE 1 AC2 5 ASP A 61 ASP A 63 ASP A 65 GLU A 67 SITE 2 AC2 5 GLU A 72 SITE 1 AC3 2 HIS A 42 PHE A 43 SITE 1 AC4 4 GLY A 19 ARG A 20 LYS A 24 GLU A 51 CRYST1 34.224 91.158 58.649 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.029219 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010970 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017051 0.00000