HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 10-MAR-09 3GKB TITLE CRYSTAL STRUCTURE OF A PUTATIVE ENOYL-COA HYDRATASE FROM STREPTOMYCES TITLE 2 AVERMITILIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE ENOYL-COA HYDRATASE; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES AVERMITILIS; SOURCE 3 ORGANISM_TAXID: 33903; SOURCE 4 GENE: ECHA1, SAV492, SAV_492; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: MODIFIED PET26 KEYWDS STRUCTURAL GENOMICS, UNKNOWN FUNCTION, PSI-2, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS, KEYWDS 3 NYSGXRC EXPDTA X-RAY DIFFRACTION AUTHOR J.B.BONANNO,J.FREEMAN,K.T.BAIN,S.CHANG,R.ROMERO,S.WASSERMAN, AUTHOR 2 J.M.SAUDER,S.K.BURLEY,S.C.ALMO,NEW YORK SGX RESEARCH CENTER FOR AUTHOR 3 STRUCTURAL GENOMICS (NYSGXRC) REVDAT 6 21-FEB-24 3GKB 1 REMARK REVDAT 5 10-FEB-21 3GKB 1 AUTHOR JRNL REMARK SEQADV REVDAT 4 21-NOV-18 3GKB 1 AUTHOR REVDAT 3 01-NOV-17 3GKB 1 REMARK REVDAT 2 13-JUL-11 3GKB 1 VERSN REVDAT 1 24-MAR-09 3GKB 0 JRNL AUTH J.B.BONANNO,J.FREEMAN,K.T.BAIN,S.CHANG,R.ROMERO,S.WASSERMAN, JRNL AUTH 2 J.M.SAUDER,S.K.BURLEY,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE ENOYL-COA HYDRATASE FROM JRNL TITL 2 STREPTOMYCES AVERMITILIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 74073 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3727 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5146 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.98 REMARK 3 BIN R VALUE (WORKING SET) : 0.2330 REMARK 3 BIN FREE R VALUE SET COUNT : 264 REMARK 3 BIN FREE R VALUE : 0.3270 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6128 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 684 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.07000 REMARK 3 B22 (A**2) : 0.23000 REMARK 3 B33 (A**2) : -0.30000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.125 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.118 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.073 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.314 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6299 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4197 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8558 ; 1.399 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10209 ; 0.959 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 845 ; 5.038 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 274 ;35.577 ;23.540 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1003 ;12.223 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 60 ;19.492 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 989 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7231 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1271 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4129 ; 0.787 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1712 ; 0.226 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6549 ; 1.443 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2170 ; 2.535 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2000 ; 4.070 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3GKB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1000051967. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-MAR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97958 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.25 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 74217 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 77.224 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.10700 REMARK 200 R SYM (I) : 0.10700 REMARK 200 FOR THE DATA SET : 12.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.25900 REMARK 200 R SYM FOR SHELL (I) : 0.25900 REMARK 200 FOR SHELL : 5.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXCD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM SODIUM ACETATE PH 5.0, 33% PEG REMARK 280 4000, 200MM AMMONIUM ACETATE, VAPOR DIFFUSION, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.23050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.22350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.75100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 77.22350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.23050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.75100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE ASSEMBLY OF THE BIOLOGICAL UNIT THAT REMARK 300 IS SHOWN IN REMARK 350 IS PUTATIVE AT THE TIME OF DEPOSITION. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -1 REMARK 465 SER A 0 REMARK 465 LEU A 1 REMARK 465 ARG A 2 REMARK 465 ASN A 3 REMARK 465 ASP A 4 REMARK 465 GLY A 279 REMARK 465 HIS A 280 REMARK 465 HIS A 281 REMARK 465 HIS A 282 REMARK 465 HIS A 283 REMARK 465 HIS A 284 REMARK 465 HIS A 285 REMARK 465 MET B -1 REMARK 465 SER B 0 REMARK 465 LEU B 1 REMARK 465 ARG B 2 REMARK 465 ASN B 3 REMARK 465 ASP B 4 REMARK 465 ALA B 5 REMARK 465 MET C -1 REMARK 465 SER C 0 REMARK 465 LEU C 1 REMARK 465 ARG C 2 REMARK 465 GLY C 279 REMARK 465 HIS C 280 REMARK 465 HIS C 281 REMARK 465 HIS C 282 REMARK 465 HIS C 283 REMARK 465 HIS C 284 REMARK 465 HIS C 285 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 179 CG CD OE1 OE2 REMARK 470 ASP A 212 CG OD1 OD2 REMARK 470 GLU A 278 CG CD OE1 OE2 REMARK 470 GLN B 80 CG CD OE1 NE2 REMARK 470 GLU B 81 CG CD OE1 OE2 REMARK 470 GLU B 179 CG CD OE1 OE2 REMARK 470 GLU C 179 CG CD OE1 OE2 REMARK 470 GLU C 198 CG CD OE1 OE2 REMARK 470 ARG C 277 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 278 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 202 O HOH A 698 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 23 84.76 -151.99 REMARK 500 HIS A 67 176.07 158.39 REMARK 500 ASP A 267 61.94 -117.46 REMARK 500 ASP B 23 88.65 -151.93 REMARK 500 HIS B 67 176.53 158.81 REMARK 500 ILE B 147 -169.07 -129.96 REMARK 500 ASP C 23 87.54 -153.24 REMARK 500 HIS C 67 174.35 158.58 REMARK 500 ASP C 212 130.16 -38.00 REMARK 500 ASP C 267 66.19 -118.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 286 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 286 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 286 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-11252B RELATED DB: TARGETDB DBREF 3GKB A 2 277 UNP Q82QL3 Q82QL3_STRAW 2 277 DBREF 3GKB B 2 277 UNP Q82QL3 Q82QL3_STRAW 2 277 DBREF 3GKB C 2 277 UNP Q82QL3 Q82QL3_STRAW 2 277 SEQADV 3GKB MET A -1 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB SER A 0 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB LEU A 1 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB GLU A 278 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB GLY A 279 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS A 280 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS A 281 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS A 282 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS A 283 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS A 284 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS A 285 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB MET B -1 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB SER B 0 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB LEU B 1 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB GLU B 278 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB GLY B 279 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS B 280 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS B 281 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS B 282 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS B 283 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS B 284 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS B 285 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB MET C -1 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB SER C 0 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB LEU C 1 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB GLU C 278 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB GLY C 279 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS C 280 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS C 281 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS C 282 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS C 283 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS C 284 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS C 285 UNP Q82QL3 EXPRESSION TAG SEQRES 1 A 287 MET SER LEU ARG ASN ASP ALA TYR SER THR LEU ARG VAL SEQRES 2 A 287 SER SER GLU HIS GLY VAL ALA ARG ILE ILE LEU ASP ASN SEQRES 3 A 287 PRO PRO VAL ASN VAL ILE GLY ALA THR MET MET ARG GLU SEQRES 4 A 287 LEU ARG THR VAL LEU THR THR LEU ALA ASP ASP SER SER SEQRES 5 A 287 VAL ARG VAL ILE VAL PHE SER SER ALA ASP PRO GLU PHE SEQRES 6 A 287 PHE LEU ALA HIS VAL ASP MET ARG ILE GLY GLU LYS MET SEQRES 7 A 287 ASP ALA LEU GLN GLU LEU ALA ALA SER ALA PRO ALA ASP SEQRES 8 A 287 VAL ASN VAL PHE GLN ALA VAL GLY GLU LEU ILE ARG HIS SEQRES 9 A 287 GLN PRO GLN VAL THR ILE VAL LYS LEU ALA GLY LYS ALA SEQRES 10 A 287 ARG GLY GLY GLY ALA GLU PHE VAL ALA ALA ALA ASP MET SEQRES 11 A 287 ALA PHE ALA ALA ALA GLU THR ALA GLY LEU GLY GLN ILE SEQRES 12 A 287 GLU ALA LEU MET GLY ILE ILE PRO GLY GLY GLY GLY THR SEQRES 13 A 287 GLN TYR LEU ARG GLY ARG VAL GLY ARG ASN ARG ALA LEU SEQRES 14 A 287 GLU VAL VAL LEU THR ALA ASP LEU PHE ASP ALA GLU THR SEQRES 15 A 287 ALA ALA SER TYR GLY TRP ILE ASN ARG ALA LEU PRO ALA SEQRES 16 A 287 ASP GLU LEU ASP GLU TYR VAL ASP ARG VAL ALA ARG ASN SEQRES 17 A 287 ILE ALA ALA LEU PRO ASP GLY VAL ILE GLU ALA ALA LYS SEQRES 18 A 287 ARG SER LEU PRO ALA ASP ASP LEU LYS GLU GLY LEU LEU SEQRES 19 A 287 GLY GLU ASN ASP ALA TRP ALA ALA THR PHE SER LEU PRO SEQRES 20 A 287 ALA ALA GLN GLN LEU ILE SER GLY GLY LEU LYS ASP GLY SEQRES 21 A 287 ALA GLN THR PRO ALA GLY GLU ARG ASP LEU GLU GLY LEU SEQRES 22 A 287 MET ARG SER VAL ALA ARG GLU GLY HIS HIS HIS HIS HIS SEQRES 23 A 287 HIS SEQRES 1 B 287 MET SER LEU ARG ASN ASP ALA TYR SER THR LEU ARG VAL SEQRES 2 B 287 SER SER GLU HIS GLY VAL ALA ARG ILE ILE LEU ASP ASN SEQRES 3 B 287 PRO PRO VAL ASN VAL ILE GLY ALA THR MET MET ARG GLU SEQRES 4 B 287 LEU ARG THR VAL LEU THR THR LEU ALA ASP ASP SER SER SEQRES 5 B 287 VAL ARG VAL ILE VAL PHE SER SER ALA ASP PRO GLU PHE SEQRES 6 B 287 PHE LEU ALA HIS VAL ASP MET ARG ILE GLY GLU LYS MET SEQRES 7 B 287 ASP ALA LEU GLN GLU LEU ALA ALA SER ALA PRO ALA ASP SEQRES 8 B 287 VAL ASN VAL PHE GLN ALA VAL GLY GLU LEU ILE ARG HIS SEQRES 9 B 287 GLN PRO GLN VAL THR ILE VAL LYS LEU ALA GLY LYS ALA SEQRES 10 B 287 ARG GLY GLY GLY ALA GLU PHE VAL ALA ALA ALA ASP MET SEQRES 11 B 287 ALA PHE ALA ALA ALA GLU THR ALA GLY LEU GLY GLN ILE SEQRES 12 B 287 GLU ALA LEU MET GLY ILE ILE PRO GLY GLY GLY GLY THR SEQRES 13 B 287 GLN TYR LEU ARG GLY ARG VAL GLY ARG ASN ARG ALA LEU SEQRES 14 B 287 GLU VAL VAL LEU THR ALA ASP LEU PHE ASP ALA GLU THR SEQRES 15 B 287 ALA ALA SER TYR GLY TRP ILE ASN ARG ALA LEU PRO ALA SEQRES 16 B 287 ASP GLU LEU ASP GLU TYR VAL ASP ARG VAL ALA ARG ASN SEQRES 17 B 287 ILE ALA ALA LEU PRO ASP GLY VAL ILE GLU ALA ALA LYS SEQRES 18 B 287 ARG SER LEU PRO ALA ASP ASP LEU LYS GLU GLY LEU LEU SEQRES 19 B 287 GLY GLU ASN ASP ALA TRP ALA ALA THR PHE SER LEU PRO SEQRES 20 B 287 ALA ALA GLN GLN LEU ILE SER GLY GLY LEU LYS ASP GLY SEQRES 21 B 287 ALA GLN THR PRO ALA GLY GLU ARG ASP LEU GLU GLY LEU SEQRES 22 B 287 MET ARG SER VAL ALA ARG GLU GLY HIS HIS HIS HIS HIS SEQRES 23 B 287 HIS SEQRES 1 C 287 MET SER LEU ARG ASN ASP ALA TYR SER THR LEU ARG VAL SEQRES 2 C 287 SER SER GLU HIS GLY VAL ALA ARG ILE ILE LEU ASP ASN SEQRES 3 C 287 PRO PRO VAL ASN VAL ILE GLY ALA THR MET MET ARG GLU SEQRES 4 C 287 LEU ARG THR VAL LEU THR THR LEU ALA ASP ASP SER SER SEQRES 5 C 287 VAL ARG VAL ILE VAL PHE SER SER ALA ASP PRO GLU PHE SEQRES 6 C 287 PHE LEU ALA HIS VAL ASP MET ARG ILE GLY GLU LYS MET SEQRES 7 C 287 ASP ALA LEU GLN GLU LEU ALA ALA SER ALA PRO ALA ASP SEQRES 8 C 287 VAL ASN VAL PHE GLN ALA VAL GLY GLU LEU ILE ARG HIS SEQRES 9 C 287 GLN PRO GLN VAL THR ILE VAL LYS LEU ALA GLY LYS ALA SEQRES 10 C 287 ARG GLY GLY GLY ALA GLU PHE VAL ALA ALA ALA ASP MET SEQRES 11 C 287 ALA PHE ALA ALA ALA GLU THR ALA GLY LEU GLY GLN ILE SEQRES 12 C 287 GLU ALA LEU MET GLY ILE ILE PRO GLY GLY GLY GLY THR SEQRES 13 C 287 GLN TYR LEU ARG GLY ARG VAL GLY ARG ASN ARG ALA LEU SEQRES 14 C 287 GLU VAL VAL LEU THR ALA ASP LEU PHE ASP ALA GLU THR SEQRES 15 C 287 ALA ALA SER TYR GLY TRP ILE ASN ARG ALA LEU PRO ALA SEQRES 16 C 287 ASP GLU LEU ASP GLU TYR VAL ASP ARG VAL ALA ARG ASN SEQRES 17 C 287 ILE ALA ALA LEU PRO ASP GLY VAL ILE GLU ALA ALA LYS SEQRES 18 C 287 ARG SER LEU PRO ALA ASP ASP LEU LYS GLU GLY LEU LEU SEQRES 19 C 287 GLY GLU ASN ASP ALA TRP ALA ALA THR PHE SER LEU PRO SEQRES 20 C 287 ALA ALA GLN GLN LEU ILE SER GLY GLY LEU LYS ASP GLY SEQRES 21 C 287 ALA GLN THR PRO ALA GLY GLU ARG ASP LEU GLU GLY LEU SEQRES 22 C 287 MET ARG SER VAL ALA ARG GLU GLY HIS HIS HIS HIS HIS SEQRES 23 C 287 HIS HET GOL A 286 6 HET GOL B 286 6 HET GOL C 286 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 GOL 3(C3 H8 O3) FORMUL 7 HOH *684(H2 O) HELIX 1 1 GLY A 31 ASP A 47 1 17 HELIX 2 2 ARG A 71 GLU A 74 5 4 HELIX 3 3 LYS A 75 SER A 85 1 11 HELIX 4 4 PHE A 93 GLN A 103 1 11 HELIX 5 5 GLY A 117 ALA A 126 1 10 HELIX 6 6 GLN A 140 GLY A 146 5 7 HELIX 7 7 GLY A 152 GLY A 162 1 11 HELIX 8 8 GLY A 162 ALA A 173 1 12 HELIX 9 9 ALA A 178 GLY A 185 1 8 HELIX 10 10 PRO A 192 ALA A 209 1 18 HELIX 11 11 GLY A 213 LEU A 222 1 10 HELIX 12 12 LEU A 227 SER A 243 1 17 HELIX 13 13 PRO A 245 ASP A 257 1 13 HELIX 14 14 THR A 261 ASP A 267 1 7 HELIX 15 15 ASP A 267 GLU A 278 1 12 HELIX 16 16 GLY B 31 ASP B 47 1 17 HELIX 17 17 ARG B 71 GLU B 74 5 4 HELIX 18 18 LYS B 75 ALA B 86 1 12 HELIX 19 19 PHE B 93 HIS B 102 1 10 HELIX 20 20 GLY B 117 ALA B 126 1 10 HELIX 21 21 ILE B 141 GLY B 146 5 6 HELIX 22 22 GLY B 152 GLY B 162 1 11 HELIX 23 23 GLY B 162 ALA B 173 1 12 HELIX 24 24 ALA B 178 GLY B 185 1 8 HELIX 25 25 PRO B 192 ALA B 209 1 18 HELIX 26 26 GLY B 213 LEU B 222 1 10 HELIX 27 27 LEU B 227 PHE B 242 1 16 HELIX 28 28 PRO B 245 ASP B 257 1 13 HELIX 29 29 THR B 261 ASP B 267 1 7 HELIX 30 30 ASP B 267 GLY B 279 1 13 HELIX 31 31 GLY C 31 ASP C 47 1 17 HELIX 32 32 ARG C 71 GLU C 74 5 4 HELIX 33 33 LYS C 75 SER C 85 1 11 HELIX 34 34 PHE C 93 HIS C 102 1 10 HELIX 35 35 GLY C 117 ALA C 126 1 10 HELIX 36 36 GLN C 140 GLY C 146 5 7 HELIX 37 37 GLY C 152 GLY C 162 1 11 HELIX 38 38 GLY C 162 ALA C 173 1 12 HELIX 39 39 ALA C 178 GLY C 185 1 8 HELIX 40 40 GLU C 195 ALA C 209 1 15 HELIX 41 41 GLY C 213 LEU C 222 1 10 HELIX 42 42 LEU C 227 SER C 243 1 17 HELIX 43 43 LEU C 244 ASP C 257 1 14 HELIX 44 44 THR C 261 ASP C 267 1 7 HELIX 45 45 ASP C 267 GLU C 278 1 12 SHEET 1 A 6 LEU A 9 GLU A 14 0 SHEET 2 A 6 VAL A 17 LEU A 22 -1 O ILE A 21 N ARG A 10 SHEET 3 A 6 VAL A 53 SER A 58 1 O SER A 57 N LEU A 22 SHEET 4 A 6 VAL A 106 LEU A 111 1 O LYS A 110 N PHE A 56 SHEET 5 A 6 MET A 128 ALA A 132 1 O PHE A 130 N LEU A 111 SHEET 6 A 6 ARG A 189 LEU A 191 1 O LEU A 191 N ALA A 131 SHEET 1 B 4 PHE A 63 LEU A 65 0 SHEET 2 B 4 LYS A 114 ARG A 116 1 O LYS A 114 N PHE A 64 SHEET 3 B 4 GLY A 137 GLY A 139 1 O GLY A 137 N ALA A 115 SHEET 4 B 4 PHE A 176 ASP A 177 -1 O PHE A 176 N LEU A 138 SHEET 1 C 6 LEU B 9 GLU B 14 0 SHEET 2 C 6 VAL B 17 LEU B 22 -1 O ARG B 19 N SER B 12 SHEET 3 C 6 VAL B 53 SER B 58 1 O VAL B 53 N ALA B 18 SHEET 4 C 6 VAL B 106 LEU B 111 1 O VAL B 106 N ILE B 54 SHEET 5 C 6 MET B 128 ALA B 132 1 O PHE B 130 N LEU B 111 SHEET 6 C 6 ARG B 189 LEU B 191 1 O LEU B 191 N ALA B 131 SHEET 1 D 4 PHE B 63 LEU B 65 0 SHEET 2 D 4 LYS B 114 ARG B 116 1 O LYS B 114 N PHE B 64 SHEET 3 D 4 GLY B 137 GLY B 139 1 O GLY B 137 N ALA B 115 SHEET 4 D 4 PHE B 176 ASP B 177 -1 O PHE B 176 N LEU B 138 SHEET 1 E 6 LEU C 9 GLU C 14 0 SHEET 2 E 6 VAL C 17 LEU C 22 -1 O ARG C 19 N SER C 12 SHEET 3 E 6 VAL C 53 SER C 58 1 O SER C 57 N LEU C 22 SHEET 4 E 6 VAL C 106 LEU C 111 1 O VAL C 106 N ILE C 54 SHEET 5 E 6 MET C 128 ALA C 132 1 O PHE C 130 N LEU C 111 SHEET 6 E 6 ARG C 189 LEU C 191 1 O LEU C 191 N ALA C 131 SHEET 1 F 4 PHE C 63 LEU C 65 0 SHEET 2 F 4 LYS C 114 ARG C 116 1 O LYS C 114 N PHE C 64 SHEET 3 F 4 GLY C 137 GLY C 139 1 O GLY C 137 N ALA C 115 SHEET 4 F 4 PHE C 176 ASP C 177 -1 O PHE C 176 N LEU C 138 CISPEP 1 PRO A 25 PRO A 26 0 5.35 CISPEP 2 PRO B 25 PRO B 26 0 2.58 CISPEP 3 PRO C 25 PRO C 26 0 5.21 SITE 1 AC1 11 ARG A 101 ALA A 124 ALA A 125 ALA A 126 SITE 2 AC1 11 TYR A 156 ARG A 160 ASP A 225 HOH A 299 SITE 3 AC1 11 HOH A 389 HOH A 546 ASN B 164 SITE 1 AC2 10 ARG B 101 ALA B 124 ALA B 125 ALA B 126 SITE 2 AC2 10 TYR B 156 ARG B 160 LEU B 227 HOH B 356 SITE 3 AC2 10 HOH B 378 ASN C 164 SITE 1 AC3 10 ASN A 164 ARG C 101 ALA C 124 ALA C 125 SITE 2 AC3 10 ALA C 126 ARG C 160 ASP C 225 HOH C 318 SITE 3 AC3 10 HOH C 352 HOH C 355 CRYST1 58.461 87.502 154.447 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017105 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011428 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006475 0.00000 CONECT 6186 6187 6188 CONECT 6187 6186 CONECT 6188 6186 6189 6190 CONECT 6189 6188 CONECT 6190 6188 6191 CONECT 6191 6190 CONECT 6192 6193 6194 CONECT 6193 6192 CONECT 6194 6192 6195 6196 CONECT 6195 6194 CONECT 6196 6194 6197 CONECT 6197 6196 CONECT 6198 6199 6200 CONECT 6199 6198 CONECT 6200 6198 6201 6202 CONECT 6201 6200 CONECT 6202 6200 6203 CONECT 6203 6202 MASTER 348 0 3 45 30 0 9 6 6830 3 18 69 END