HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 10-MAR-09 3GKB TITLE CRYSTAL STRUCTURE OF A PUTATIVE ENOYL-COA HYDRATASE FROM STREPTOMYCES TITLE 2 AVERMITILIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE ENOYL-COA HYDRATASE; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES AVERMITILIS; SOURCE 3 ORGANISM_TAXID: 33903; SOURCE 4 GENE: ECHA1, SAV492, SAV_492; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: MODIFIED PET26 KEYWDS STRUCTURAL GENOMICS, UNKNOWN FUNCTION, PSI-2, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS, KEYWDS 3 NYSGXRC EXPDTA X-RAY DIFFRACTION AUTHOR J.B.BONANNO,J.FREEMAN,K.T.BAIN,S.CHANG,R.ROMERO,S.WASSERMAN, AUTHOR 2 J.M.SAUDER,S.K.BURLEY,S.C.ALMO,NEW YORK SGX RESEARCH CENTER FOR AUTHOR 3 STRUCTURAL GENOMICS (NYSGXRC) REVDAT 6 21-FEB-24 3GKB 1 REMARK REVDAT 5 10-FEB-21 3GKB 1 AUTHOR JRNL REMARK SEQADV REVDAT 4 21-NOV-18 3GKB 1 AUTHOR REVDAT 3 01-NOV-17 3GKB 1 REMARK REVDAT 2 13-JUL-11 3GKB 1 VERSN REVDAT 1 24-MAR-09 3GKB 0 JRNL AUTH J.B.BONANNO,J.FREEMAN,K.T.BAIN,S.CHANG,R.ROMERO,S.WASSERMAN, JRNL AUTH 2 J.M.SAUDER,S.K.BURLEY,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE ENOYL-COA HYDRATASE FROM JRNL TITL 2 STREPTOMYCES AVERMITILIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 74073 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3727 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5146 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.98 REMARK 3 BIN R VALUE (WORKING SET) : 0.2330 REMARK 3 BIN FREE R VALUE SET COUNT : 264 REMARK 3 BIN FREE R VALUE : 0.3270 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6128 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 684 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.07000 REMARK 3 B22 (A**2) : 0.23000 REMARK 3 B33 (A**2) : -0.30000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.125 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.118 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.073 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.314 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6299 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4197 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8558 ; 1.399 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10209 ; 0.959 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 845 ; 5.038 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 274 ;35.577 ;23.540 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1003 ;12.223 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 60 ;19.492 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 989 ; 0.084 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7231 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1271 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4129 ; 0.787 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1712 ; 0.226 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6549 ; 1.443 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2170 ; 2.535 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2000 ; 4.070 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3GKB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1000051967. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-MAR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97958 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.25 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 74217 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 77.224 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.10700 REMARK 200 R SYM (I) : 0.10700 REMARK 200 FOR THE DATA SET : 12.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.25900 REMARK 200 R SYM FOR SHELL (I) : 0.25900 REMARK 200 FOR SHELL : 5.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXCD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM SODIUM ACETATE PH 5.0, 33% PEG REMARK 280 4000, 200MM AMMONIUM ACETATE, VAPOR DIFFUSION, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.23050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.22350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.75100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 77.22350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.23050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.75100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE ASSEMBLY OF THE BIOLOGICAL UNIT THAT REMARK 300 IS SHOWN IN REMARK 350 IS PUTATIVE AT THE TIME OF DEPOSITION. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -1 REMARK 465 SER A 0 REMARK 465 LEU A 1 REMARK 465 ARG A 2 REMARK 465 ASN A 3 REMARK 465 ASP A 4 REMARK 465 GLY A 279 REMARK 465 HIS A 280 REMARK 465 HIS A 281 REMARK 465 HIS A 282 REMARK 465 HIS A 283 REMARK 465 HIS A 284 REMARK 465 HIS A 285 REMARK 465 MET B -1 REMARK 465 SER B 0 REMARK 465 LEU B 1 REMARK 465 ARG B 2 REMARK 465 ASN B 3 REMARK 465 ASP B 4 REMARK 465 ALA B 5 REMARK 465 MET C -1 REMARK 465 SER C 0 REMARK 465 LEU C 1 REMARK 465 ARG C 2 REMARK 465 GLY C 279 REMARK 465 HIS C 280 REMARK 465 HIS C 281 REMARK 465 HIS C 282 REMARK 465 HIS C 283 REMARK 465 HIS C 284 REMARK 465 HIS C 285 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 179 CG CD OE1 OE2 REMARK 470 ASP A 212 CG OD1 OD2 REMARK 470 GLU A 278 CG CD OE1 OE2 REMARK 470 GLN B 80 CG CD OE1 NE2 REMARK 470 GLU B 81 CG CD OE1 OE2 REMARK 470 GLU B 179 CG CD OE1 OE2 REMARK 470 GLU C 179 CG CD OE1 OE2 REMARK 470 GLU C 198 CG CD OE1 OE2 REMARK 470 ARG C 277 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 278 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 202 O HOH A 698 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 23 84.76 -151.99 REMARK 500 HIS A 67 176.07 158.39 REMARK 500 ASP A 267 61.94 -117.46 REMARK 500 ASP B 23 88.65 -151.93 REMARK 500 HIS B 67 176.53 158.81 REMARK 500 ILE B 147 -169.07 -129.96 REMARK 500 ASP C 23 87.54 -153.24 REMARK 500 HIS C 67 174.35 158.58 REMARK 500 ASP C 212 130.16 -38.00 REMARK 500 ASP C 267 66.19 -118.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 286 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 286 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 286 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-11252B RELATED DB: TARGETDB DBREF 3GKB A 2 277 UNP Q82QL3 Q82QL3_STRAW 2 277 DBREF 3GKB B 2 277 UNP Q82QL3 Q82QL3_STRAW 2 277 DBREF 3GKB C 2 277 UNP Q82QL3 Q82QL3_STRAW 2 277 SEQADV 3GKB MET A -1 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB SER A 0 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB LEU A 1 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB GLU A 278 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB GLY A 279 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS A 280 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS A 281 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS A 282 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS A 283 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS A 284 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS A 285 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB MET B -1 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB SER B 0 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB LEU B 1 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB GLU B 278 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB GLY B 279 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS B 280 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS B 281 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS B 282 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS B 283 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS B 284 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS B 285 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB MET C -1 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB SER C 0 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB LEU C 1 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB GLU C 278 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB GLY C 279 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS C 280 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS C 281 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS C 282 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS C 283 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS C 284 UNP Q82QL3 EXPRESSION TAG SEQADV 3GKB HIS C 285 UNP Q82QL3 EXPRESSION TAG SEQRES 1 A 287 MET SER LEU ARG ASN ASP ALA TYR SER THR LEU ARG VAL SEQRES 2 A 287 SER SER GLU HIS GLY VAL ALA ARG ILE ILE LEU ASP ASN SEQRES 3 A 287 PRO PRO VAL ASN VAL ILE GLY ALA THR MET MET ARG GLU SEQRES 4 A 287 LEU ARG THR VAL LEU THR THR LEU ALA ASP ASP SER SER SEQRES 5 A 287 VAL ARG VAL ILE VAL PHE SER SER ALA ASP PRO GLU PHE SEQRES 6 A 287 PHE LEU ALA HIS VAL ASP MET ARG ILE GLY GLU LYS MET SEQRES 7 A 287 ASP ALA LEU GLN GLU LEU ALA ALA SER ALA PRO ALA ASP SEQRES 8 A 287 VAL ASN VAL PHE GLN ALA VAL GLY GLU LEU ILE ARG HIS SEQRES 9 A 287 GLN PRO GLN VAL THR ILE VAL LYS LEU ALA GLY LYS ALA SEQRES 10 A 287 ARG GLY GLY GLY ALA GLU PHE VAL ALA ALA ALA ASP MET SEQRES 11 A 287 ALA PHE ALA ALA ALA GLU THR ALA GLY LEU GLY GLN ILE SEQRES 12 A 287 GLU ALA LEU MET GLY ILE ILE PRO GLY GLY GLY GLY THR SEQRES 13 A 287 GLN TYR LEU ARG GLY ARG VAL GLY ARG ASN ARG ALA LEU SEQRES 14 A 287 GLU VAL VAL LEU THR ALA ASP LEU PHE ASP ALA GLU THR SEQRES 15 A 287 ALA ALA SER TYR GLY TRP ILE ASN ARG ALA LEU PRO ALA SEQRES 16 A 287 ASP GLU LEU ASP GLU TYR VAL ASP ARG VAL ALA ARG ASN SEQRES 17 A 287 ILE ALA ALA LEU PRO ASP GLY VAL ILE GLU ALA ALA LYS SEQRES 18 A 287 ARG SER LEU PRO ALA ASP ASP LEU LYS GLU GLY LEU LEU SEQRES 19 A 287 GLY GLU ASN ASP ALA TRP ALA ALA THR PHE SER LEU PRO SEQRES 20 A 287 ALA ALA GLN GLN LEU ILE SER GLY GLY LEU LYS ASP GLY SEQRES 21 A 287 ALA GLN THR PRO ALA GLY GLU ARG ASP LEU GLU GLY LEU SEQRES 22 A 287 MET ARG SER VAL ALA ARG GLU GLY HIS HIS HIS HIS HIS SEQRES 23 A 287 HIS SEQRES 1 B 287 MET SER LEU ARG ASN ASP ALA TYR SER THR LEU ARG VAL SEQRES 2 B 287 SER SER GLU HIS GLY VAL ALA ARG ILE ILE LEU ASP ASN SEQRES 3 B 287 PRO PRO VAL ASN VAL ILE GLY ALA THR MET MET ARG GLU SEQRES 4 B 287 LEU ARG THR VAL LEU THR THR LEU ALA ASP ASP SER SER SEQRES 5 B 287 VAL ARG VAL ILE VAL PHE SER SER ALA ASP PRO GLU PHE SEQRES 6 B 287 PHE LEU ALA HIS VAL ASP MET ARG ILE GLY GLU LYS MET SEQRES 7 B 287 ASP ALA LEU GLN GLU LEU ALA ALA SER ALA PRO ALA ASP SEQRES 8 B 287 VAL ASN VAL PHE GLN ALA VAL GLY GLU LEU ILE ARG HIS SEQRES 9 B 287 GLN PRO GLN VAL THR ILE VAL LYS LEU ALA GLY LYS ALA SEQRES 10 B 287 ARG GLY GLY GLY ALA GLU PHE VAL ALA ALA ALA ASP MET SEQRES 11 B 287 ALA PHE ALA ALA ALA GLU THR ALA GLY LEU GLY GLN ILE SEQRES 12 B 287 GLU ALA LEU MET GLY ILE ILE PRO GLY GLY GLY GLY THR SEQRES 13 B 287 GLN TYR LEU ARG GLY ARG VAL GLY ARG ASN ARG ALA LEU SEQRES 14 B 287 GLU VAL VAL LEU THR ALA ASP LEU PHE ASP ALA GLU THR SEQRES 15 B 287 ALA ALA SER TYR GLY TRP ILE ASN ARG ALA LEU PRO ALA SEQRES 16 B 287 ASP GLU LEU ASP GLU TYR VAL ASP ARG VAL ALA ARG ASN SEQRES 17 B 287 ILE ALA ALA LEU PRO ASP GLY VAL ILE GLU ALA ALA LYS SEQRES 18 B 287 ARG SER LEU PRO ALA ASP ASP LEU LYS GLU GLY LEU LEU SEQRES 19 B 287 GLY GLU ASN ASP ALA TRP ALA ALA THR PHE SER LEU PRO SEQRES 20 B 287 ALA ALA GLN GLN LEU ILE SER GLY GLY LEU LYS ASP GLY SEQRES 21 B 287 ALA GLN THR PRO ALA GLY GLU ARG ASP LEU GLU GLY LEU SEQRES 22 B 287 MET ARG SER VAL ALA ARG GLU GLY HIS HIS HIS HIS HIS SEQRES 23 B 287 HIS SEQRES 1 C 287 MET SER LEU ARG ASN ASP ALA TYR SER THR LEU ARG VAL SEQRES 2 C 287 SER SER GLU HIS GLY VAL ALA ARG ILE ILE LEU ASP ASN SEQRES 3 C 287 PRO PRO VAL ASN VAL ILE GLY ALA THR MET MET ARG GLU SEQRES 4 C 287 LEU ARG THR VAL LEU THR THR LEU ALA ASP ASP SER SER SEQRES 5 C 287 VAL ARG VAL ILE VAL PHE SER SER ALA ASP PRO GLU PHE SEQRES 6 C 287 PHE LEU ALA HIS VAL ASP MET ARG ILE GLY GLU LYS MET SEQRES 7 C 287 ASP ALA LEU GLN GLU LEU ALA ALA SER ALA PRO ALA ASP SEQRES 8 C 287 VAL ASN VAL PHE GLN ALA VAL GLY GLU LEU ILE ARG HIS SEQRES 9 C 287 GLN PRO GLN VAL THR ILE VAL LYS LEU ALA GLY LYS ALA SEQRES 10 C 287 ARG GLY GLY GLY ALA GLU PHE VAL ALA ALA ALA ASP MET SEQRES 11 C 287 ALA PHE ALA ALA ALA GLU THR ALA GLY LEU GLY GLN ILE SEQRES 12 C 287 GLU ALA LEU MET GLY ILE ILE PRO GLY GLY GLY GLY THR SEQRES 13 C 287 GLN TYR LEU ARG GLY ARG VAL GLY ARG ASN ARG ALA LEU SEQRES 14 C 287 GLU VAL VAL LEU THR ALA ASP LEU PHE ASP ALA GLU THR SEQRES 15 C 287 ALA ALA SER TYR GLY TRP ILE ASN ARG ALA LEU PRO ALA SEQRES 16 C 287 ASP GLU LEU ASP GLU TYR VAL ASP ARG VAL ALA ARG ASN SEQRES 17 C 287 ILE ALA ALA LEU PRO ASP GLY VAL ILE GLU ALA ALA LYS SEQRES 18 C 287 ARG SER LEU PRO ALA ASP ASP LEU LYS GLU GLY LEU LEU SEQRES 19 C 287 GLY GLU ASN ASP ALA TRP ALA ALA THR PHE SER LEU PRO SEQRES 20 C 287 ALA ALA GLN GLN LEU ILE SER GLY GLY LEU LYS ASP GLY SEQRES 21 C 287 ALA GLN THR PRO ALA GLY GLU ARG ASP LEU GLU GLY LEU SEQRES 22 C 287 MET ARG SER VAL ALA ARG GLU GLY HIS HIS HIS HIS HIS SEQRES 23 C 287 HIS HET GOL A 286 6 HET GOL B 286 6 HET GOL C 286 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 GOL 3(C3 H8 O3) FORMUL 7 HOH *684(H2 O) HELIX 1 1 GLY A 31 ASP A 47 1 17 HELIX 2 2 ARG A 71 GLU A 74 5 4 HELIX 3 3 LYS A 75 SER A 85 1 11 HELIX 4 4 PHE A 93 GLN A 103 1 11 HELIX 5 5 GLY A 117 ALA A 126 1 10 HELIX 6 6 GLN A 140 GLY A 146 5 7 HELIX 7 7 GLY A 152 GLY A 162 1 11 HELIX 8 8 GLY A 162 ALA A 173 1 12 HELIX 9 9 ALA A 178 GLY A 185 1 8 HELIX 10 10 PRO A 192 ALA A 209 1 18 HELIX 11 11 GLY A 213 LEU A 222 1 10 HELIX 12 12 LEU A 227 SER A 243 1 17 HELIX 13 13 PRO A 245 ASP A 257 1 13 HELIX 14 14 THR A 261 ASP A 267 1 7 HELIX 15 15 ASP A 267 GLU A 278 1 12 HELIX 16 16 GLY B 31 ASP B 47 1 17 HELIX 17 17 ARG B 71 GLU B 74 5 4 HELIX 18 18 LYS B 75 ALA B 86 1 12 HELIX 19 19 PHE B 93 HIS B 102 1 10 HELIX 20 20 GLY B 117 ALA B 126 1 10 HELIX 21 21 ILE B 141 GLY B 146 5 6 HELIX 22 22 GLY B 152 GLY B 162 1 11 HELIX 23 23 GLY B 162 ALA B 173 1 12 HELIX 24 24 ALA B 178 GLY B 185 1 8 HELIX 25 25 PRO B 192 ALA B 209 1 18 HELIX 26 26 GLY B 213 LEU B 222 1 10 HELIX 27 27 LEU B 227 PHE B 242 1 16 HELIX 28 28 PRO B 245 ASP B 257 1 13 HELIX 29 29 THR B 261 ASP B 267 1 7 HELIX 30 30 ASP B 267 GLY B 279 1 13 HELIX 31 31 GLY C 31 ASP C 47 1 17 HELIX 32 32 ARG C 71 GLU C 74 5 4 HELIX 33 33 LYS C 75 SER C 85 1 11 HELIX 34 34 PHE C 93 HIS C 102 1 10 HELIX 35 35 GLY C 117 ALA C 126 1 10 HELIX 36 36 GLN C 140 GLY C 146 5 7 HELIX 37 37 GLY C 152 GLY C 162 1 11 HELIX 38 38 GLY C 162 ALA C 173 1 12 HELIX 39 39 ALA C 178 GLY C 185 1 8 HELIX 40 40 GLU C 195 ALA C 209 1 15 HELIX 41 41 GLY C 213 LEU C 222 1 10 HELIX 42 42 LEU C 227 SER C 243 1 17 HELIX 43 43 LEU C 244 ASP C 257 1 14 HELIX 44 44 THR C 261 ASP C 267 1 7 HELIX 45 45 ASP C 267 GLU C 278 1 12 SHEET 1 A 6 LEU A 9 GLU A 14 0 SHEET 2 A 6 VAL A 17 LEU A 22 -1 O ILE A 21 N ARG A 10 SHEET 3 A 6 VAL A 53 SER A 58 1 O SER A 57 N LEU A 22 SHEET 4 A 6 VAL A 106 LEU A 111 1 O LYS A 110 N PHE A 56 SHEET 5 A 6 MET A 128 ALA A 132 1 O PHE A 130 N LEU A 111 SHEET 6 A 6 ARG A 189 LEU A 191 1 O LEU A 191 N ALA A 131 SHEET 1 B 4 PHE A 63 LEU A 65 0 SHEET 2 B 4 LYS A 114 ARG A 116 1 O LYS A 114 N PHE A 64 SHEET 3 B 4 GLY A 137 GLY A 139 1 O GLY A 137 N ALA A 115 SHEET 4 B 4 PHE A 176 ASP A 177 -1 O PHE A 176 N LEU A 138 SHEET 1 C 6 LEU B 9 GLU B 14 0 SHEET 2 C 6 VAL B 17 LEU B 22 -1 O ARG B 19 N SER B 12 SHEET 3 C 6 VAL B 53 SER B 58 1 O VAL B 53 N ALA B 18 SHEET 4 C 6 VAL B 106 LEU B 111 1 O VAL B 106 N ILE B 54 SHEET 5 C 6 MET B 128 ALA B 132 1 O PHE B 130 N LEU B 111 SHEET 6 C 6 ARG B 189 LEU B 191 1 O LEU B 191 N ALA B 131 SHEET 1 D 4 PHE B 63 LEU B 65 0 SHEET 2 D 4 LYS B 114 ARG B 116 1 O LYS B 114 N PHE B 64 SHEET 3 D 4 GLY B 137 GLY B 139 1 O GLY B 137 N ALA B 115 SHEET 4 D 4 PHE B 176 ASP B 177 -1 O PHE B 176 N LEU B 138 SHEET 1 E 6 LEU C 9 GLU C 14 0 SHEET 2 E 6 VAL C 17 LEU C 22 -1 O ARG C 19 N SER C 12 SHEET 3 E 6 VAL C 53 SER C 58 1 O SER C 57 N LEU C 22 SHEET 4 E 6 VAL C 106 LEU C 111 1 O VAL C 106 N ILE C 54 SHEET 5 E 6 MET C 128 ALA C 132 1 O PHE C 130 N LEU C 111 SHEET 6 E 6 ARG C 189 LEU C 191 1 O LEU C 191 N ALA C 131 SHEET 1 F 4 PHE C 63 LEU C 65 0 SHEET 2 F 4 LYS C 114 ARG C 116 1 O LYS C 114 N PHE C 64 SHEET 3 F 4 GLY C 137 GLY C 139 1 O GLY C 137 N ALA C 115 SHEET 4 F 4 PHE C 176 ASP C 177 -1 O PHE C 176 N LEU C 138 CISPEP 1 PRO A 25 PRO A 26 0 5.35 CISPEP 2 PRO B 25 PRO B 26 0 2.58 CISPEP 3 PRO C 25 PRO C 26 0 5.21 SITE 1 AC1 11 ARG A 101 ALA A 124 ALA A 125 ALA A 126 SITE 2 AC1 11 TYR A 156 ARG A 160 ASP A 225 HOH A 299 SITE 3 AC1 11 HOH A 389 HOH A 546 ASN B 164 SITE 1 AC2 10 ARG B 101 ALA B 124 ALA B 125 ALA B 126 SITE 2 AC2 10 TYR B 156 ARG B 160 LEU B 227 HOH B 356 SITE 3 AC2 10 HOH B 378 ASN C 164 SITE 1 AC3 10 ASN A 164 ARG C 101 ALA C 124 ALA C 125 SITE 2 AC3 10 ALA C 126 ARG C 160 ASP C 225 HOH C 318 SITE 3 AC3 10 HOH C 352 HOH C 355 CRYST1 58.461 87.502 154.447 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017105 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011428 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006475 0.00000