HEADER OXIDOREDUCTASE 11-MAR-09 3GL0 TITLE CRYSTAL STRUCTURE OF DICAMBA MONOOXYGENASE BOUND TO 3,6 TITLE 2 DICHLOROSALICYLIC ACID (DCSA) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DDMC; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: DICAMBA MONOOXYGENASE; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STENOTROPHOMONAS MALTOPHILIA; SOURCE 3 ORGANISM_COMMON: PSEUDOMONAS MALTOPHILIA; SOURCE 4 ORGANISM_TAXID: 40324; SOURCE 5 STRAIN: DI-6; SOURCE 6 GENE: DDMC; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS RIESKE PROTEIN, NON-HEME MONONUCLEAR IRON, OXYGENASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.A.WILSON,R.DUMITRU,W.Z.JIANG,D.P.WEEKS REVDAT 4 21-FEB-24 3GL0 1 REMARK SEQADV LINK REVDAT 3 22-SEP-09 3GL0 1 JRNL REVDAT 2 01-SEP-09 3GL0 1 REMARK REVDAT 1 04-AUG-09 3GL0 0 JRNL AUTH R.DUMITRU,W.Z.JIANG,D.P.WEEKS,M.A.WILSON JRNL TITL CRYSTAL STRUCTURE OF DICAMBA MONOOXYGENASE: A RIESKE NONHEME JRNL TITL 2 OXYGENASE THAT CATALYZES OXIDATIVE DEMETHYLATION. JRNL REF J.MOL.BIOL. V. 392 498 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19616011 JRNL DOI 10.1016/J.JMB.2009.07.021 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.25 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 117603 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5898 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.79 REMARK 3 REFLECTION IN BIN (WORKING SET) : 8298 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.61 REMARK 3 BIN R VALUE (WORKING SET) : 0.2570 REMARK 3 BIN FREE R VALUE SET COUNT : 449 REMARK 3 BIN FREE R VALUE : 0.3210 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7657 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 82 REMARK 3 SOLVENT ATOMS : 924 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.26000 REMARK 3 B22 (A**2) : 0.26000 REMARK 3 B33 (A**2) : -0.39000 REMARK 3 B12 (A**2) : 0.13000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.100 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.102 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.077 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.679 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7925 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 5377 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10763 ; 1.280 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13029 ; 0.735 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 987 ;10.189 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 376 ;32.926 ;23.590 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1221 ;13.693 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 67 ;17.881 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1161 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8937 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1608 ; 0.000 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1608 ; 0.227 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 5890 ; 0.242 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3782 ; 0.187 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 4156 ; 0.090 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 643 ; 0.208 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 23 ; 0.281 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 43 ; 0.328 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 33 ; 0.437 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 6347 ; 3.239 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1991 ; 1.119 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7926 ; 3.493 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3446 ; 5.335 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2830 ; 6.695 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 2 A 155 5 REMARK 3 1 B 2 B 155 5 REMARK 3 1 C 2 C 155 5 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 886 ; .26 ; .50 REMARK 3 MEDIUM POSITIONAL 1 B (A): 886 ; .27 ; .50 REMARK 3 MEDIUM POSITIONAL 1 C (A): 886 ; .25 ; .50 REMARK 3 LOOSE POSITIONAL 1 A (A): 1087 ; .37 ; 5.00 REMARK 3 LOOSE POSITIONAL 1 B (A): 1087 ; .38 ; 5.00 REMARK 3 LOOSE POSITIONAL 1 C (A): 1087 ; .40 ; 5.00 REMARK 3 MEDIUM THERMAL 1 A (A**2): 886 ; 1.83 ; 2.00 REMARK 3 MEDIUM THERMAL 1 B (A**2): 886 ; 1.83 ; 2.00 REMARK 3 MEDIUM THERMAL 1 C (A**2): 886 ; 1.50 ; 2.00 REMARK 3 LOOSE THERMAL 1 A (A**2): 1087 ; 2.49 ; 10.00 REMARK 3 LOOSE THERMAL 1 B (A**2): 1087 ; 2.51 ; 10.00 REMARK 3 LOOSE THERMAL 1 C (A**2): 1087 ; 2.00 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3GL0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1000051992. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-BM-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : BENT GE(111) MONOCHROMATOR REMARK 200 OPTICS : BENT RH COATED CONICAL SI MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 117603 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 70.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.81000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXDE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5% PEG 4000, 100 MM SODIUM ACETATE, PH REMARK 280 5.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 105.70467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 52.85233 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -89.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LEU A 342 REMARK 465 GLU A 343 REMARK 465 HIS A 344 REMARK 465 HIS A 345 REMARK 465 HIS A 346 REMARK 465 HIS A 347 REMARK 465 HIS A 348 REMARK 465 HIS A 349 REMARK 465 MET B 1 REMARK 465 LEU B 207 REMARK 465 ARG B 208 REMARK 465 GLY B 209 REMARK 465 ALA B 210 REMARK 465 ASN B 211 REMARK 465 THR B 212 REMARK 465 LEU B 342 REMARK 465 GLU B 343 REMARK 465 HIS B 344 REMARK 465 HIS B 345 REMARK 465 HIS B 346 REMARK 465 HIS B 347 REMARK 465 HIS B 348 REMARK 465 HIS B 349 REMARK 465 MET C 1 REMARK 465 GLY C 159 REMARK 465 HIS C 160 REMARK 465 ALA C 161 REMARK 465 GLN C 162 REMARK 465 TYR C 163 REMARK 465 VAL C 164 REMARK 465 HIS C 165 REMARK 465 ARG C 166 REMARK 465 ALA C 167 REMARK 465 ASN C 168 REMARK 465 ALA C 169 REMARK 465 GLN C 170 REMARK 465 THR C 171 REMARK 465 ASP C 172 REMARK 465 ALA C 173 REMARK 465 PHE C 174 REMARK 465 ASP C 175 REMARK 465 ARG C 176 REMARK 465 LEU C 177 REMARK 465 ARG C 208 REMARK 465 GLY C 209 REMARK 465 ALA C 210 REMARK 465 ASN C 211 REMARK 465 THR C 212 REMARK 465 ARG C 341 REMARK 465 LEU C 342 REMARK 465 GLU C 343 REMARK 465 HIS C 344 REMARK 465 HIS C 345 REMARK 465 HIS C 346 REMARK 465 HIS C 347 REMARK 465 HIS C 348 REMARK 465 HIS C 349 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 855 O HOH A 897 1.43 REMARK 500 O HOH C 750 O HOH C 816 1.90 REMARK 500 O HOH A 892 O HOH B 843 1.97 REMARK 500 O HOH B 847 O HOH B 923 2.02 REMARK 500 O HOH B 457 O HOH B 762 2.02 REMARK 500 O HOH C 420 O HOH C 658 2.02 REMARK 500 O HOH C 427 O HOH C 699 2.04 REMARK 500 O HOH C 470 O HOH C 610 2.04 REMARK 500 OD1 ASP B 321 O HOH B 676 2.04 REMARK 500 O HOH A 489 O HOH A 662 2.08 REMARK 500 O HOH B 455 O HOH B 677 2.11 REMARK 500 O HOH C 518 O HOH C 758 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O LEU A 207 O HOH B 898 3455 1.36 REMARK 500 O HOH A 854 O HOH B 898 3455 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLY A 89 C GLY A 89 O 0.157 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 317 CG - SD - CE ANGL. DEV. = 9.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 19 -163.46 -165.77 REMARK 500 HIS A 51 -76.51 -72.41 REMARK 500 PHE A 53 17.35 83.97 REMARK 500 SER A 226 42.38 -154.13 REMARK 500 GLU A 256 -68.80 -102.70 REMARK 500 LYS A 292 -67.33 -105.42 REMARK 500 ALA A 339 1.03 -63.89 REMARK 500 HIS B 51 -73.91 -74.23 REMARK 500 PHE B 53 14.24 86.66 REMARK 500 ASP B 175 -36.10 -39.16 REMARK 500 LEU B 177 126.49 -22.60 REMARK 500 GLU B 180 130.14 -170.51 REMARK 500 SER B 226 48.11 -152.28 REMARK 500 GLU B 256 -65.53 -102.85 REMARK 500 LYS B 292 -69.31 -100.65 REMARK 500 HIS C 51 -70.64 -73.59 REMARK 500 PHE C 53 15.33 81.42 REMARK 500 TYR C 70 -61.55 -91.93 REMARK 500 ASP C 157 -78.48 -84.31 REMARK 500 SER C 226 41.68 -153.02 REMARK 500 GLU C 256 -65.01 -100.91 REMARK 500 ALA C 289 -53.77 -120.60 REMARK 500 ALA C 339 50.88 -58.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA A 340 ARG A 341 -63.41 REMARK 500 ASP B 175 ARG B 176 -149.52 REMARK 500 ALA C 339 ALA C 340 112.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A 500 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 49 SG REMARK 620 2 FES A 500 S1 113.5 REMARK 620 3 FES A 500 S2 110.7 103.9 REMARK 620 4 CYS A 68 SG 108.7 110.3 109.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES A 500 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 51 ND1 REMARK 620 2 FES A 500 S1 112.5 REMARK 620 3 FES A 500 S2 114.3 105.0 REMARK 620 4 HIS A 71 ND1 91.9 118.2 115.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 160 NE2 REMARK 620 2 HIS A 165 NE2 110.4 REMARK 620 3 ASP A 294 OD2 125.5 98.6 REMARK 620 4 OXY A 700 O1 105.2 115.6 102.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES B 500 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 49 SG REMARK 620 2 FES B 500 S1 108.8 REMARK 620 3 FES B 500 S2 113.8 105.8 REMARK 620 4 CYS B 68 SG 108.7 111.9 107.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES B 500 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 51 ND1 REMARK 620 2 FES B 500 S1 114.3 REMARK 620 3 FES B 500 S2 113.1 105.9 REMARK 620 4 HIS B 71 ND1 90.4 116.8 116.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE B 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 160 NE2 REMARK 620 2 HIS B 165 NE2 104.0 REMARK 620 3 ASP B 294 OD2 130.6 101.1 REMARK 620 4 OXY B 600 O1 103.0 117.3 102.1 REMARK 620 5 OXY B 600 O2 91.9 94.3 127.9 29.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES C 500 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 49 SG REMARK 620 2 FES C 500 S1 110.1 REMARK 620 3 FES C 500 S2 114.3 104.0 REMARK 620 4 CYS C 68 SG 107.6 111.1 109.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES C 500 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 51 ND1 REMARK 620 2 FES C 500 S1 115.3 REMARK 620 3 FES C 500 S2 112.6 104.9 REMARK 620 4 HIS C 71 ND1 91.9 116.6 115.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FES A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HXX A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OXY A 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 350 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 351 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 352 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FES B 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FE B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OXY B 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HXX B 700 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 350 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 351 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 352 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 353 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FES C 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO C 350 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO C 351 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO C 352 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3GKE RELATED DB: PDB REMARK 900 RELATED ID: 3GL2 RELATED DB: PDB DBREF 3GL0 A 3 340 UNP Q5S3I3 Q5S3I3_STEMA 2 339 DBREF 3GL0 B 3 340 UNP Q5S3I3 Q5S3I3_STEMA 2 339 DBREF 3GL0 C 3 340 UNP Q5S3I3 Q5S3I3_STEMA 2 339 SEQADV 3GL0 MET A 1 UNP Q5S3I3 INSERTION SEQADV 3GL0 ALA A 2 UNP Q5S3I3 INSERTION SEQADV 3GL0 ARG A 341 UNP Q5S3I3 INSERTION SEQADV 3GL0 LEU A 342 UNP Q5S3I3 EXPRESSION TAG SEQADV 3GL0 GLU A 343 UNP Q5S3I3 EXPRESSION TAG SEQADV 3GL0 HIS A 344 UNP Q5S3I3 EXPRESSION TAG SEQADV 3GL0 HIS A 345 UNP Q5S3I3 EXPRESSION TAG SEQADV 3GL0 HIS A 346 UNP Q5S3I3 EXPRESSION TAG SEQADV 3GL0 HIS A 347 UNP Q5S3I3 EXPRESSION TAG SEQADV 3GL0 HIS A 348 UNP Q5S3I3 EXPRESSION TAG SEQADV 3GL0 HIS A 349 UNP Q5S3I3 EXPRESSION TAG SEQADV 3GL0 MET B 1 UNP Q5S3I3 INSERTION SEQADV 3GL0 ALA B 2 UNP Q5S3I3 INSERTION SEQADV 3GL0 ARG B 341 UNP Q5S3I3 INSERTION SEQADV 3GL0 LEU B 342 UNP Q5S3I3 EXPRESSION TAG SEQADV 3GL0 GLU B 343 UNP Q5S3I3 EXPRESSION TAG SEQADV 3GL0 HIS B 344 UNP Q5S3I3 EXPRESSION TAG SEQADV 3GL0 HIS B 345 UNP Q5S3I3 EXPRESSION TAG SEQADV 3GL0 HIS B 346 UNP Q5S3I3 EXPRESSION TAG SEQADV 3GL0 HIS B 347 UNP Q5S3I3 EXPRESSION TAG SEQADV 3GL0 HIS B 348 UNP Q5S3I3 EXPRESSION TAG SEQADV 3GL0 HIS B 349 UNP Q5S3I3 EXPRESSION TAG SEQADV 3GL0 MET C 1 UNP Q5S3I3 INSERTION SEQADV 3GL0 ALA C 2 UNP Q5S3I3 INSERTION SEQADV 3GL0 ARG C 341 UNP Q5S3I3 INSERTION SEQADV 3GL0 LEU C 342 UNP Q5S3I3 EXPRESSION TAG SEQADV 3GL0 GLU C 343 UNP Q5S3I3 EXPRESSION TAG SEQADV 3GL0 HIS C 344 UNP Q5S3I3 EXPRESSION TAG SEQADV 3GL0 HIS C 345 UNP Q5S3I3 EXPRESSION TAG SEQADV 3GL0 HIS C 346 UNP Q5S3I3 EXPRESSION TAG SEQADV 3GL0 HIS C 347 UNP Q5S3I3 EXPRESSION TAG SEQADV 3GL0 HIS C 348 UNP Q5S3I3 EXPRESSION TAG SEQADV 3GL0 HIS C 349 UNP Q5S3I3 EXPRESSION TAG SEQRES 1 A 349 MET ALA THR PHE VAL ARG ASN ALA TRP TYR VAL ALA ALA SEQRES 2 A 349 LEU PRO GLU GLU LEU SER GLU LYS PRO LEU GLY ARG THR SEQRES 3 A 349 ILE LEU ASP THR PRO LEU ALA LEU TYR ARG GLN PRO ASP SEQRES 4 A 349 GLY VAL VAL ALA ALA LEU LEU ASP ILE CYS PRO HIS ARG SEQRES 5 A 349 PHE ALA PRO LEU SER ASP GLY ILE LEU VAL ASN GLY HIS SEQRES 6 A 349 LEU GLN CYS PRO TYR HIS GLY LEU GLU PHE ASP GLY GLY SEQRES 7 A 349 GLY GLN CYS VAL HIS ASN PRO HIS GLY ASN GLY ALA ARG SEQRES 8 A 349 PRO ALA SER LEU ASN VAL ARG SER PHE PRO VAL VAL GLU SEQRES 9 A 349 ARG ASP ALA LEU ILE TRP ILE TRP PRO GLY ASP PRO ALA SEQRES 10 A 349 LEU ALA ASP PRO GLY ALA ILE PRO ASP PHE GLY CYS ARG SEQRES 11 A 349 VAL ASP PRO ALA TYR ARG THR VAL GLY GLY TYR GLY HIS SEQRES 12 A 349 VAL ASP CYS ASN TYR LYS LEU LEU VAL ASP ASN LEU MET SEQRES 13 A 349 ASP LEU GLY HIS ALA GLN TYR VAL HIS ARG ALA ASN ALA SEQRES 14 A 349 GLN THR ASP ALA PHE ASP ARG LEU GLU ARG GLU VAL ILE SEQRES 15 A 349 VAL GLY ASP GLY GLU ILE GLN ALA LEU MET LYS ILE PRO SEQRES 16 A 349 GLY GLY THR PRO SER VAL LEU MET ALA LYS PHE LEU ARG SEQRES 17 A 349 GLY ALA ASN THR PRO VAL ASP ALA TRP ASN ASP ILE ARG SEQRES 18 A 349 TRP ASN LYS VAL SER ALA MET LEU ASN PHE ILE ALA VAL SEQRES 19 A 349 ALA PRO GLU GLY THR PRO LYS GLU GLN SER ILE HIS SER SEQRES 20 A 349 ARG GLY THR HIS ILE LEU THR PRO GLU THR GLU ALA SER SEQRES 21 A 349 CYS HIS TYR PHE PHE GLY SER SER ARG ASN PHE GLY ILE SEQRES 22 A 349 ASP ASP PRO GLU MET ASP GLY VAL LEU ARG SER TRP GLN SEQRES 23 A 349 ALA GLN ALA LEU VAL LYS GLU ASP LYS VAL VAL VAL GLU SEQRES 24 A 349 ALA ILE GLU ARG ARG ARG ALA TYR VAL GLU ALA ASN GLY SEQRES 25 A 349 ILE ARG PRO ALA MET LEU SER CYS ASP GLU ALA ALA VAL SEQRES 26 A 349 ARG VAL SER ARG GLU ILE GLU LYS LEU GLU GLN LEU GLU SEQRES 27 A 349 ALA ALA ARG LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 349 MET ALA THR PHE VAL ARG ASN ALA TRP TYR VAL ALA ALA SEQRES 2 B 349 LEU PRO GLU GLU LEU SER GLU LYS PRO LEU GLY ARG THR SEQRES 3 B 349 ILE LEU ASP THR PRO LEU ALA LEU TYR ARG GLN PRO ASP SEQRES 4 B 349 GLY VAL VAL ALA ALA LEU LEU ASP ILE CYS PRO HIS ARG SEQRES 5 B 349 PHE ALA PRO LEU SER ASP GLY ILE LEU VAL ASN GLY HIS SEQRES 6 B 349 LEU GLN CYS PRO TYR HIS GLY LEU GLU PHE ASP GLY GLY SEQRES 7 B 349 GLY GLN CYS VAL HIS ASN PRO HIS GLY ASN GLY ALA ARG SEQRES 8 B 349 PRO ALA SER LEU ASN VAL ARG SER PHE PRO VAL VAL GLU SEQRES 9 B 349 ARG ASP ALA LEU ILE TRP ILE TRP PRO GLY ASP PRO ALA SEQRES 10 B 349 LEU ALA ASP PRO GLY ALA ILE PRO ASP PHE GLY CYS ARG SEQRES 11 B 349 VAL ASP PRO ALA TYR ARG THR VAL GLY GLY TYR GLY HIS SEQRES 12 B 349 VAL ASP CYS ASN TYR LYS LEU LEU VAL ASP ASN LEU MET SEQRES 13 B 349 ASP LEU GLY HIS ALA GLN TYR VAL HIS ARG ALA ASN ALA SEQRES 14 B 349 GLN THR ASP ALA PHE ASP ARG LEU GLU ARG GLU VAL ILE SEQRES 15 B 349 VAL GLY ASP GLY GLU ILE GLN ALA LEU MET LYS ILE PRO SEQRES 16 B 349 GLY GLY THR PRO SER VAL LEU MET ALA LYS PHE LEU ARG SEQRES 17 B 349 GLY ALA ASN THR PRO VAL ASP ALA TRP ASN ASP ILE ARG SEQRES 18 B 349 TRP ASN LYS VAL SER ALA MET LEU ASN PHE ILE ALA VAL SEQRES 19 B 349 ALA PRO GLU GLY THR PRO LYS GLU GLN SER ILE HIS SER SEQRES 20 B 349 ARG GLY THR HIS ILE LEU THR PRO GLU THR GLU ALA SER SEQRES 21 B 349 CYS HIS TYR PHE PHE GLY SER SER ARG ASN PHE GLY ILE SEQRES 22 B 349 ASP ASP PRO GLU MET ASP GLY VAL LEU ARG SER TRP GLN SEQRES 23 B 349 ALA GLN ALA LEU VAL LYS GLU ASP LYS VAL VAL VAL GLU SEQRES 24 B 349 ALA ILE GLU ARG ARG ARG ALA TYR VAL GLU ALA ASN GLY SEQRES 25 B 349 ILE ARG PRO ALA MET LEU SER CYS ASP GLU ALA ALA VAL SEQRES 26 B 349 ARG VAL SER ARG GLU ILE GLU LYS LEU GLU GLN LEU GLU SEQRES 27 B 349 ALA ALA ARG LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 C 349 MET ALA THR PHE VAL ARG ASN ALA TRP TYR VAL ALA ALA SEQRES 2 C 349 LEU PRO GLU GLU LEU SER GLU LYS PRO LEU GLY ARG THR SEQRES 3 C 349 ILE LEU ASP THR PRO LEU ALA LEU TYR ARG GLN PRO ASP SEQRES 4 C 349 GLY VAL VAL ALA ALA LEU LEU ASP ILE CYS PRO HIS ARG SEQRES 5 C 349 PHE ALA PRO LEU SER ASP GLY ILE LEU VAL ASN GLY HIS SEQRES 6 C 349 LEU GLN CYS PRO TYR HIS GLY LEU GLU PHE ASP GLY GLY SEQRES 7 C 349 GLY GLN CYS VAL HIS ASN PRO HIS GLY ASN GLY ALA ARG SEQRES 8 C 349 PRO ALA SER LEU ASN VAL ARG SER PHE PRO VAL VAL GLU SEQRES 9 C 349 ARG ASP ALA LEU ILE TRP ILE TRP PRO GLY ASP PRO ALA SEQRES 10 C 349 LEU ALA ASP PRO GLY ALA ILE PRO ASP PHE GLY CYS ARG SEQRES 11 C 349 VAL ASP PRO ALA TYR ARG THR VAL GLY GLY TYR GLY HIS SEQRES 12 C 349 VAL ASP CYS ASN TYR LYS LEU LEU VAL ASP ASN LEU MET SEQRES 13 C 349 ASP LEU GLY HIS ALA GLN TYR VAL HIS ARG ALA ASN ALA SEQRES 14 C 349 GLN THR ASP ALA PHE ASP ARG LEU GLU ARG GLU VAL ILE SEQRES 15 C 349 VAL GLY ASP GLY GLU ILE GLN ALA LEU MET LYS ILE PRO SEQRES 16 C 349 GLY GLY THR PRO SER VAL LEU MET ALA LYS PHE LEU ARG SEQRES 17 C 349 GLY ALA ASN THR PRO VAL ASP ALA TRP ASN ASP ILE ARG SEQRES 18 C 349 TRP ASN LYS VAL SER ALA MET LEU ASN PHE ILE ALA VAL SEQRES 19 C 349 ALA PRO GLU GLY THR PRO LYS GLU GLN SER ILE HIS SER SEQRES 20 C 349 ARG GLY THR HIS ILE LEU THR PRO GLU THR GLU ALA SER SEQRES 21 C 349 CYS HIS TYR PHE PHE GLY SER SER ARG ASN PHE GLY ILE SEQRES 22 C 349 ASP ASP PRO GLU MET ASP GLY VAL LEU ARG SER TRP GLN SEQRES 23 C 349 ALA GLN ALA LEU VAL LYS GLU ASP LYS VAL VAL VAL GLU SEQRES 24 C 349 ALA ILE GLU ARG ARG ARG ALA TYR VAL GLU ALA ASN GLY SEQRES 25 C 349 ILE ARG PRO ALA MET LEU SER CYS ASP GLU ALA ALA VAL SEQRES 26 C 349 ARG VAL SER ARG GLU ILE GLU LYS LEU GLU GLN LEU GLU SEQRES 27 C 349 ALA ALA ARG LEU GLU HIS HIS HIS HIS HIS HIS HET FES A 500 4 HET FE A 501 1 HET HXX A 600 12 HET OXY A 700 2 HET EDO A 350 4 HET EDO A 351 4 HET EDO A 352 4 HET FES B 500 4 HET FE B 501 1 HET OXY B 600 2 HET HXX B 700 12 HET EDO B 350 4 HET EDO B 351 4 HET EDO B 352 4 HET EDO B 353 4 HET FES C 500 4 HET EDO C 350 4 HET EDO C 351 4 HET EDO C 352 4 HETNAM FES FE2/S2 (INORGANIC) CLUSTER HETNAM FE FE (III) ION HETNAM HXX 3,6-DICHLORO-2-HYDROXYBENZOIC ACID HETNAM OXY OXYGEN MOLECULE HETNAM EDO 1,2-ETHANEDIOL HETSYN HXX 3,6 DICHLOROSALICYLIC ACID HETSYN EDO ETHYLENE GLYCOL FORMUL 4 FES 3(FE2 S2) FORMUL 5 FE 2(FE 3+) FORMUL 6 HXX 2(C7 H4 CL2 O3) FORMUL 7 OXY 2(O2) FORMUL 8 EDO 10(C2 H6 O2) FORMUL 23 HOH *924(H2 O) HELIX 1 1 LEU A 14 LEU A 18 5 5 HELIX 2 2 PRO A 55 GLY A 59 5 5 HELIX 3 3 PRO A 92 ASN A 96 5 5 HELIX 4 4 ASP A 115 ALA A 119 5 5 HELIX 5 5 ASP A 120 ILE A 124 5 5 HELIX 6 6 PHE A 127 ASP A 132 5 6 HELIX 7 7 ASN A 147 ASP A 157 1 11 HELIX 8 8 HIS A 160 HIS A 165 1 6 HELIX 9 9 HIS A 165 GLN A 170 1 6 HELIX 10 10 ALA A 173 LEU A 177 5 5 HELIX 11 11 SER A 200 LEU A 207 1 8 HELIX 12 12 PRO A 240 SER A 244 5 5 HELIX 13 13 ASP A 275 LEU A 290 1 16 HELIX 14 14 LYS A 292 ASN A 311 1 20 HELIX 15 15 LEU A 318 CYS A 320 5 3 HELIX 16 16 ASP A 321 ALA A 339 1 19 HELIX 17 17 LEU B 14 LEU B 18 5 5 HELIX 18 18 PRO B 55 GLY B 59 5 5 HELIX 19 19 PRO B 92 ASN B 96 5 5 HELIX 20 20 ASP B 115 ALA B 119 5 5 HELIX 21 21 ASP B 120 ILE B 124 5 5 HELIX 22 22 PHE B 127 ASP B 132 5 6 HELIX 23 23 ASN B 147 ASP B 157 1 11 HELIX 24 24 HIS B 160 HIS B 165 1 6 HELIX 25 25 HIS B 165 GLN B 170 1 6 HELIX 26 26 THR B 171 LEU B 177 5 7 HELIX 27 27 SER B 200 PHE B 206 1 7 HELIX 28 28 PRO B 240 SER B 244 5 5 HELIX 29 29 ASP B 275 LEU B 290 1 16 HELIX 30 30 LYS B 292 GLY B 312 1 21 HELIX 31 31 ASP B 321 ALA B 340 1 20 HELIX 32 32 LEU C 14 LEU C 18 5 5 HELIX 33 33 PRO C 55 GLY C 59 5 5 HELIX 34 34 PRO C 92 ASN C 96 5 5 HELIX 35 35 ASP C 115 ALA C 119 5 5 HELIX 36 36 ASP C 120 ILE C 124 5 5 HELIX 37 37 PHE C 127 ASP C 132 5 6 HELIX 38 38 ASN C 147 LEU C 158 1 12 HELIX 39 39 MET C 203 LEU C 207 5 5 HELIX 40 40 PRO C 240 SER C 244 5 5 HELIX 41 41 ASP C 275 ARG C 283 1 9 HELIX 42 42 SER C 284 ALA C 289 1 6 HELIX 43 43 VAL C 291 ARG C 304 1 14 HELIX 44 44 ARG C 304 ASN C 311 1 8 HELIX 45 45 LEU C 318 CYS C 320 5 3 HELIX 46 46 ASP C 321 ALA C 339 1 19 SHEET 1 A 3 TYR A 10 ALA A 13 0 SHEET 2 A 3 LEU A 108 ILE A 111 -1 O ILE A 109 N ALA A 12 SHEET 3 A 3 VAL A 102 ARG A 105 -1 N VAL A 103 O TRP A 110 SHEET 1 B 3 LEU A 23 ILE A 27 0 SHEET 2 B 3 THR A 30 ARG A 36 -1 O LEU A 32 N ARG A 25 SHEET 3 B 3 VAL A 42 LEU A 46 -1 O ALA A 43 N TYR A 35 SHEET 1 C 4 LEU A 61 VAL A 62 0 SHEET 2 C 4 HIS A 65 GLN A 67 -1 O HIS A 65 N VAL A 62 SHEET 3 C 4 GLU A 74 PHE A 75 -1 O PHE A 75 N LEU A 66 SHEET 4 C 4 CYS A 81 HIS A 83 -1 O VAL A 82 N GLU A 74 SHEET 1 D 7 ARG A 136 VAL A 144 0 SHEET 2 D 7 SER A 260 ARG A 269 -1 O CYS A 261 N VAL A 144 SHEET 3 D 7 ILE A 245 THR A 257 -1 N ILE A 252 O PHE A 264 SHEET 4 D 7 ALA A 227 PRO A 236 -1 N ILE A 232 O SER A 247 SHEET 5 D 7 VAL A 214 ASN A 223 -1 N ASP A 215 O ALA A 235 SHEET 6 D 7 GLU A 187 GLY A 197 -1 N ILE A 194 O ALA A 216 SHEET 7 D 7 GLU A 178 VAL A 183 -1 N GLU A 180 O LEU A 191 SHEET 1 E 3 TYR B 10 ALA B 13 0 SHEET 2 E 3 LEU B 108 ILE B 111 -1 O ILE B 109 N ALA B 12 SHEET 3 E 3 VAL B 102 ARG B 105 -1 N VAL B 103 O TRP B 110 SHEET 1 F 3 LEU B 23 ILE B 27 0 SHEET 2 F 3 THR B 30 ARG B 36 -1 O LEU B 34 N LEU B 23 SHEET 3 F 3 VAL B 42 LEU B 46 -1 O LEU B 45 N ALA B 33 SHEET 1 G 4 ILE B 60 VAL B 62 0 SHEET 2 G 4 HIS B 65 GLN B 67 -1 O HIS B 65 N VAL B 62 SHEET 3 G 4 GLU B 74 PHE B 75 -1 O PHE B 75 N LEU B 66 SHEET 4 G 4 CYS B 81 HIS B 83 -1 O VAL B 82 N GLU B 74 SHEET 1 H 7 ARG B 136 VAL B 144 0 SHEET 2 H 7 SER B 260 ARG B 269 -1 O CYS B 261 N VAL B 144 SHEET 3 H 7 ILE B 245 THR B 257 -1 N ARG B 248 O SER B 268 SHEET 4 H 7 ALA B 227 PRO B 236 -1 N MET B 228 O HIS B 251 SHEET 5 H 7 VAL B 214 ASN B 223 -1 N ASP B 219 O PHE B 231 SHEET 6 H 7 GLU B 187 ILE B 194 -1 N ILE B 194 O ALA B 216 SHEET 7 H 7 GLU B 178 GLY B 184 -1 N GLU B 180 O LEU B 191 SHEET 1 I 3 TYR C 10 ALA C 13 0 SHEET 2 I 3 LEU C 108 ILE C 111 -1 O ILE C 109 N ALA C 12 SHEET 3 I 3 VAL C 102 ARG C 105 -1 N VAL C 103 O TRP C 110 SHEET 1 J 3 LEU C 23 ILE C 27 0 SHEET 2 J 3 THR C 30 ARG C 36 -1 O LEU C 34 N LEU C 23 SHEET 3 J 3 VAL C 42 LEU C 46 -1 O ALA C 43 N TYR C 35 SHEET 1 K 4 ILE C 60 VAL C 62 0 SHEET 2 K 4 HIS C 65 GLN C 67 -1 O HIS C 65 N VAL C 62 SHEET 3 K 4 GLU C 74 PHE C 75 -1 O PHE C 75 N LEU C 66 SHEET 4 K 4 CYS C 81 HIS C 83 -1 O VAL C 82 N GLU C 74 SHEET 1 L 7 ARG C 136 VAL C 144 0 SHEET 2 L 7 SER C 260 ARG C 269 -1 O ARG C 269 N ARG C 136 SHEET 3 L 7 ILE C 245 THR C 257 -1 N ILE C 252 O PHE C 264 SHEET 4 L 7 ALA C 227 PRO C 236 -1 N MET C 228 O HIS C 251 SHEET 5 L 7 VAL C 214 ASN C 223 -1 N ASP C 215 O ALA C 235 SHEET 6 L 7 GLU C 187 PRO C 195 -1 N ILE C 194 O ALA C 216 SHEET 7 L 7 ARG C 179 VAL C 183 -1 N GLU C 180 O LEU C 191 LINK SG CYS A 49 FE2 FES A 500 1555 1555 2.26 LINK ND1 HIS A 51 FE1 FES A 500 1555 1555 2.06 LINK SG CYS A 68 FE2 FES A 500 1555 1555 2.28 LINK ND1 HIS A 71 FE1 FES A 500 1555 1555 2.14 LINK NE2 HIS A 160 FE FE A 501 1555 1555 2.14 LINK NE2 HIS A 165 FE FE A 501 1555 1555 2.02 LINK OD2 ASP A 294 FE FE A 501 1555 1555 2.04 LINK FE FE A 501 O1 OXY A 700 1555 1555 2.29 LINK SG CYS B 49 FE1 FES B 500 1555 1555 2.34 LINK ND1 HIS B 51 FE2 FES B 500 1555 1555 2.12 LINK SG CYS B 68 FE1 FES B 500 1555 1555 2.36 LINK ND1 HIS B 71 FE2 FES B 500 1555 1555 2.11 LINK NE2 HIS B 160 FE FE B 501 1555 1555 2.20 LINK NE2 HIS B 165 FE FE B 501 1555 1555 2.08 LINK OD2 ASP B 294 FE FE B 501 1555 1555 2.01 LINK FE FE B 501 O1 OXY B 600 1555 1555 2.21 LINK FE FE B 501 O2 OXY B 600 1555 1555 2.45 LINK SG CYS C 49 FE2 FES C 500 1555 1555 2.29 LINK ND1 HIS C 51 FE1 FES C 500 1555 1555 2.17 LINK SG CYS C 68 FE2 FES C 500 1555 1555 2.31 LINK ND1 HIS C 71 FE1 FES C 500 1555 1555 2.11 CISPEP 1 LYS A 224 VAL A 225 0 -8.46 CISPEP 2 LYS B 224 VAL B 225 0 -4.53 CISPEP 3 ALA B 340 ARG B 341 0 22.09 CISPEP 4 LYS C 224 VAL C 225 0 -9.98 SITE 1 AC1 7 CYS A 49 HIS A 51 ARG A 52 CYS A 68 SITE 2 AC1 7 HIS A 71 GLY A 72 LEU A 73 SITE 1 AC2 4 HIS A 160 HIS A 165 ASP A 294 OXY A 700 SITE 1 AC3 11 LEU A 202 ASN A 230 ILE A 232 GLY A 249 SITE 2 AC3 11 HIS A 251 SER A 267 LEU A 282 TRP A 285 SITE 3 AC3 11 HOH A 357 HOH A 365 HOH A 675 SITE 1 AC4 5 HIS A 160 HIS A 165 LEU A 290 ASP A 294 SITE 2 AC4 5 FE A 501 SITE 1 AC5 11 TRP A 9 TYR A 10 VAL A 11 VAL A 225 SITE 2 AC5 11 SER A 226 ALA A 227 ILE A 252 LEU A 253 SITE 3 AC5 11 THR A 254 HOH A 547 HOH A 551 SITE 1 AC6 6 GLU A 16 ARG A 130 GLY A 139 HOH A 377 SITE 2 AC6 6 HOH A 467 HOH A 548 SITE 1 AC7 8 ASP A 126 GLY A 128 CYS A 129 LEU A 229 SITE 2 AC7 8 ARG A 248 HOH A 432 HOH A 517 HOH A 873 SITE 1 AC8 8 CYS B 49 HIS B 51 ARG B 52 ALA B 54 SITE 2 AC8 8 CYS B 68 HIS B 71 GLY B 72 LEU B 73 SITE 1 AC9 5 ASN B 154 HIS B 160 HIS B 165 ASP B 294 SITE 2 AC9 5 OXY B 600 SITE 1 BC1 5 HIS B 160 HIS B 165 LEU B 290 ASP B 294 SITE 2 BC1 5 FE B 501 SITE 1 BC2 9 LEU B 202 ASN B 230 HIS B 251 SER B 267 SITE 2 BC2 9 LEU B 282 TRP B 285 HOH B 366 HOH B 371 SITE 3 BC2 9 HOH B 440 SITE 1 BC3 10 TRP B 9 TYR B 10 VAL B 11 VAL B 225 SITE 2 BC3 10 SER B 226 ALA B 227 ILE B 252 LEU B 253 SITE 3 BC3 10 THR B 254 EDO B 353 SITE 1 BC4 7 LEU B 14 GLU B 16 ARG B 130 THR B 137 SITE 2 BC4 7 GLY B 139 HOH B 431 HOH B 536 SITE 1 BC5 9 MET B 156 ASP B 157 LEU B 158 ARG B 179 SITE 2 BC5 9 ALA B 190 MET B 192 ASN B 218 ASP B 219 SITE 3 BC5 9 ILE B 220 SITE 1 BC6 7 ALA B 8 TRP B 9 PRO B 125 LYS B 224 SITE 2 BC6 7 VAL B 225 EDO B 350 HOH B 684 SITE 1 BC7 7 CYS C 49 HIS C 51 ARG C 52 CYS C 68 SITE 2 BC7 7 HIS C 71 GLY C 72 LEU C 73 SITE 1 BC8 3 THR C 26 GLU C 256 THR C 257 SITE 1 BC9 7 LEU C 14 GLU C 16 ARG C 130 VAL C 138 SITE 2 BC9 7 GLY C 139 HOH C 377 HOH C 702 SITE 1 CC1 12 TRP C 9 TYR C 10 VAL C 11 LYS C 224 SITE 2 CC1 12 VAL C 225 SER C 226 ALA C 227 ILE C 252 SITE 3 CC1 12 LEU C 253 THR C 254 HOH C 381 HOH C 482 CRYST1 81.205 81.205 158.557 90.00 90.00 120.00 P 32 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012315 0.007110 0.000000 0.00000 SCALE2 0.000000 0.014220 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006307 0.00000