data_3GL6 # _entry.id 3GL6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3GL6 RCSB RCSB051998 WWPDB D_1000051998 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3GL6 _pdbx_database_status.recvd_initial_deposition_date 2009-03-11 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wang, Z.' 1 'Song, J.' 2 'Patel, D.J.' 3 # _citation.id primary _citation.title 'Haematopoietic malignancies caused by dysregulation of a chromatin-binding PHD finger.' _citation.journal_abbrev Nature _citation.journal_volume 459 _citation.page_first 847 _citation.page_last 851 _citation.year 2009 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19430464 _citation.pdbx_database_id_DOI 10.1038/nature08036 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Wang, G.G.' 1 primary 'Song, J.' 2 primary 'Wang, Z.' 3 primary 'Dormann, H.L.' 4 primary 'Casadio, F.' 5 primary 'Li, H.' 6 primary 'Luo, J.L.' 7 primary 'Patel, D.J.' 8 primary 'Allis, C.D.' 9 # _cell.entry_id 3GL6 _cell.length_a 49.950 _cell.length_b 49.950 _cell.length_c 86.450 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3GL6 _symmetry.space_group_name_H-M 'I 41' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 80 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Histone demethylase JARID1A' 5802.490 1 1.14.11.- ? 'C-terminal PHD finger' ? 2 polymer syn 'Histone H3' 1105.334 1 ? ? 'Histone H3 N-terminal residues 1-9' ? 3 non-polymer syn 'ZINC ION' 65.409 3 ? ? ? ? 4 water nat water 18.015 32 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Jumonji/ARID domain-containing protein 1A, Retinoblastoma-binding protein 2, RBBP-2' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no SVCAAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA SVCAAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA A ? 2 'polypeptide(L)' no yes 'ART(M3L)QTARK' ARTKQTARK B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 VAL n 1 3 CYS n 1 4 ALA n 1 5 ALA n 1 6 GLN n 1 7 ASN n 1 8 CYS n 1 9 GLN n 1 10 ARG n 1 11 PRO n 1 12 CYS n 1 13 LYS n 1 14 ASP n 1 15 LYS n 1 16 VAL n 1 17 ASP n 1 18 TRP n 1 19 VAL n 1 20 GLN n 1 21 CYS n 1 22 ASP n 1 23 GLY n 1 24 GLY n 1 25 CYS n 1 26 ASP n 1 27 GLU n 1 28 TRP n 1 29 PHE n 1 30 HIS n 1 31 GLN n 1 32 VAL n 1 33 CYS n 1 34 VAL n 1 35 GLY n 1 36 VAL n 1 37 SER n 1 38 PRO n 1 39 GLU n 1 40 MET n 1 41 ALA n 1 42 GLU n 1 43 ASN n 1 44 GLU n 1 45 ASP n 1 46 TYR n 1 47 ILE n 1 48 CYS n 1 49 ILE n 1 50 ASN n 1 51 CYS n 1 52 ALA n 2 1 ALA n 2 2 ARG n 2 3 THR n 2 4 M3L n 2 5 GLN n 2 6 THR n 2 7 ALA n 2 8 ARG n 2 9 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'JARID1A, RBBP2, RBP2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosetta 2 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pRSFDuet-1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP JAD1A_HUMAN P29375 1 VCAAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 1609 ? 2 PDB 3GL6 PDB 2 ARTKQTARK 2 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3GL6 A 2 ? 52 ? P29375 1609 ? 1659 ? 1609 1659 2 2 3GL6 B 1 ? 9 ? Q92133 2 ? 10 ? 1 9 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3GL6 _struct_ref_seq_dif.mon_id SER _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P29375 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'EXPRESSION TAG' _struct_ref_seq_dif.pdbx_auth_seq_num 1608 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 M3L 'L-peptide linking' n N-TRIMETHYLLYSINE ? 'C9 H21 N2 O2 1' 189.275 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 3GL6 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.90 _exptl_crystal.density_percent_sol 68.49 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '0.1M Hepes-Na, 10% iso-propanol, 20% PEG4000, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 197 ? 1 2 197 ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 CCD 'ADSC QUANTUM 315' 2008-07-05 ? 2 CCD 'ADSC QUANTUM 315' 2008-03-20 ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M 'SI mirrors' 'SINGLE WAVELENGTH' x-ray 2 1 M 'SI mirrors' 'SINGLE WAVELENGTH' x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97949 1.0 2 1.28215 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 'APS BEAMLINE 24-ID-C' APS 24-ID-C ? 0.97949 2 SYNCHROTRON 'APS BEAMLINE 24-ID-C' APS 24-ID-C ? 1.28215 # _reflns.entry_id 3GL6 _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 2 _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.9 _reflns.number_obs 8172 _reflns.number_all 8377 _reflns.percent_possible_obs 97.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.065 _reflns.pdbx_netI_over_sigmaI 55.5 _reflns.B_iso_Wilson_estimate 27.6 _reflns.pdbx_redundancy 8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1,2 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.97 _reflns_shell.percent_possible_all 85.1 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.180 _reflns_shell.meanI_over_sigI_obs 6.46 _reflns_shell.pdbx_redundancy 4.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 714 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3GL6 _refine.ls_number_reflns_obs 8172 _refine.ls_number_reflns_all 8377 _refine.pdbx_ls_sigma_I 2 _refine.pdbx_ls_sigma_F 2 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50 _refine.ls_d_res_high 1.9 _refine.ls_percent_reflns_obs 97.6 _refine.ls_R_factor_obs 0.222 _refine.ls_R_factor_all 0.229 _refine.ls_R_factor_R_work 0.208 _refine.ls_R_factor_R_free 0.225 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 786 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details Random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3GL6 _refine_analyze.Luzzati_coordinate_error_obs 0.24 _refine_analyze.Luzzati_sigma_a_obs 0.20 _refine_analyze.Luzzati_d_res_low_obs 5 _refine_analyze.Luzzati_coordinate_error_free 0.27 _refine_analyze.Luzzati_sigma_a_free 0.22 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 466 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 32 _refine_hist.number_atoms_total 501 _refine_hist.d_res_high 1.9 _refine_hist.d_res_low 50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.43 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 22.8 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.8 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 1.90 _refine_ls_shell.d_res_low 1.97 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.27 _refine_ls_shell.percent_reflns_obs 85.1 _refine_ls_shell.R_factor_R_free 0.32 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 66 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 696 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3GL6 _struct.title 'Crystal structure of JARID1A-PHD3 complexed with H3(1-9)K4me3 peptide' _struct.pdbx_descriptor 'Histone demethylase JARID1A (E.C.1.14.11.-), H3(1-9)K4me3 peptide' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3GL6 _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text ;PHD finger, H3(1-9)K4me3 peptide, leukemia, Alternative splicing, Chromatin regulator, Developmental protein, Dioxygenase, Iron, Metal-binding, Nucleus, Oxidoreductase, Phosphoprotein, Polymorphism, Transcription, Transcription regulation, Zinc, Zinc-finger, Chromosomal protein, DNA-binding, Nucleosome core ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 VAL A 32 ? GLY A 35 ? VAL A 1639 GLY A 1642 5 ? 4 HELX_P HELX_P2 2 SER A 37 ? GLU A 44 ? SER A 1644 GLU A 1651 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? B THR 3 C ? ? ? 1_555 B M3L 4 N ? ? B THR 3 B M3L 4 1_555 ? ? ? ? ? ? ? 1.326 ? covale2 covale ? ? B M3L 4 C ? ? ? 1_555 B GLN 5 N ? ? B M3L 4 B GLN 5 1_555 ? ? ? ? ? ? ? 1.326 ? metalc1 metalc ? ? A SER 1 N ? ? ? 1_555 C ZN . ZN ? ? A SER 1608 A ZN 1 1_555 ? ? ? ? ? ? ? 2.090 ? metalc2 metalc ? ? A SER 1 O ? ? ? 1_555 C ZN . ZN ? ? A SER 1608 A ZN 1 1_555 ? ? ? ? ? ? ? 2.073 ? metalc3 metalc ? ? A CYS 3 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 1610 A ZN 2 1_555 ? ? ? ? ? ? ? 2.353 ? metalc4 metalc ? ? A CYS 8 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 1615 A ZN 2 1_555 ? ? ? ? ? ? ? 2.360 ? metalc5 metalc ? ? A CYS 12 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 1619 A ZN 1 1_555 ? ? ? ? ? ? ? 2.291 ? metalc6 metalc ? ? A CYS 21 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 1628 A ZN 3 1_555 ? ? ? ? ? ? ? 2.345 ? metalc7 metalc ? ? A CYS 25 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 1632 A ZN 3 1_555 ? ? ? ? ? ? ? 2.273 ? metalc8 metalc ? ? A CYS 48 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 1655 A ZN 3 1_555 ? ? ? ? ? ? ? 2.221 ? metalc9 metalc ? ? A CYS 51 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 1658 A ZN 3 1_555 ? ? ? ? ? ? ? 2.376 ? metalc10 metalc ? ? C ZN . ZN ? ? ? 1_555 F HOH . O ? ? A ZN 1 A HOH 23 1_555 ? ? ? ? ? ? ? 2.067 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TRP A 28 ? HIS A 30 ? TRP A 1635 HIS A 1637 A 2 LYS A 15 ? GLN A 20 ? LYS A 1622 GLN A 1627 A 3 THR B 3 ? ALA B 7 ? THR B 3 ALA B 7 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE A 29 ? O PHE A 1636 N VAL A 19 ? N VAL A 1626 A 2 3 N TRP A 18 ? N TRP A 1625 O M3L B 4 ? O M3L B 4 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A 1' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A 2' AC3 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A 3' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HOH F . ? HOH A 23 . ? 1_555 ? 2 AC1 4 SER A 1 ? SER A 1608 . ? 1_555 ? 3 AC1 4 CYS A 12 ? CYS A 1619 . ? 1_555 ? 4 AC1 4 ASP A 45 ? ASP A 1652 . ? 3_445 ? 5 AC2 4 CYS A 3 ? CYS A 1610 . ? 1_555 ? 6 AC2 4 CYS A 8 ? CYS A 1615 . ? 1_555 ? 7 AC2 4 HIS A 30 ? HIS A 1637 . ? 6_445 ? 8 AC2 4 CYS A 33 ? CYS A 1640 . ? 6_445 ? 9 AC3 4 CYS A 21 ? CYS A 1628 . ? 1_555 ? 10 AC3 4 CYS A 25 ? CYS A 1632 . ? 1_555 ? 11 AC3 4 CYS A 48 ? CYS A 1655 . ? 1_555 ? 12 AC3 4 CYS A 51 ? CYS A 1658 . ? 1_555 ? # _database_PDB_matrix.entry_id 3GL6 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3GL6 _atom_sites.fract_transf_matrix[1][1] 0.020020 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020020 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011567 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1608 1608 SER SER A . n A 1 2 VAL 2 1609 1609 VAL VAL A . n A 1 3 CYS 3 1610 1610 CYS CYS A . n A 1 4 ALA 4 1611 1611 ALA ALA A . n A 1 5 ALA 5 1612 1612 ALA ALA A . n A 1 6 GLN 6 1613 1613 GLN GLN A . n A 1 7 ASN 7 1614 1614 ASN ASN A . n A 1 8 CYS 8 1615 1615 CYS CYS A . n A 1 9 GLN 9 1616 1616 GLN GLN A . n A 1 10 ARG 10 1617 1617 ARG ARG A . n A 1 11 PRO 11 1618 1618 PRO PRO A . n A 1 12 CYS 12 1619 1619 CYS CYS A . n A 1 13 LYS 13 1620 1620 LYS LYS A . n A 1 14 ASP 14 1621 1621 ASP ASP A . n A 1 15 LYS 15 1622 1622 LYS LYS A . n A 1 16 VAL 16 1623 1623 VAL VAL A . n A 1 17 ASP 17 1624 1624 ASP ASP A . n A 1 18 TRP 18 1625 1625 TRP TRP A . n A 1 19 VAL 19 1626 1626 VAL VAL A . n A 1 20 GLN 20 1627 1627 GLN GLN A . n A 1 21 CYS 21 1628 1628 CYS CYS A . n A 1 22 ASP 22 1629 1629 ASP ASP A . n A 1 23 GLY 23 1630 1630 GLY GLY A . n A 1 24 GLY 24 1631 1631 GLY GLY A . n A 1 25 CYS 25 1632 1632 CYS CYS A . n A 1 26 ASP 26 1633 1633 ASP ASP A . n A 1 27 GLU 27 1634 1634 GLU GLU A . n A 1 28 TRP 28 1635 1635 TRP TRP A . n A 1 29 PHE 29 1636 1636 PHE PHE A . n A 1 30 HIS 30 1637 1637 HIS HIS A . n A 1 31 GLN 31 1638 1638 GLN GLN A . n A 1 32 VAL 32 1639 1639 VAL VAL A . n A 1 33 CYS 33 1640 1640 CYS CYS A . n A 1 34 VAL 34 1641 1641 VAL VAL A . n A 1 35 GLY 35 1642 1642 GLY GLY A . n A 1 36 VAL 36 1643 1643 VAL VAL A . n A 1 37 SER 37 1644 1644 SER SER A . n A 1 38 PRO 38 1645 1645 PRO PRO A . n A 1 39 GLU 39 1646 1646 GLU GLU A . n A 1 40 MET 40 1647 1647 MET MET A . n A 1 41 ALA 41 1648 1648 ALA ALA A . n A 1 42 GLU 42 1649 1649 GLU GLU A . n A 1 43 ASN 43 1650 1650 ASN ASN A . n A 1 44 GLU 44 1651 1651 GLU GLU A . n A 1 45 ASP 45 1652 1652 ASP ASP A . n A 1 46 TYR 46 1653 1653 TYR TYR A . n A 1 47 ILE 47 1654 1654 ILE ILE A . n A 1 48 CYS 48 1655 1655 CYS CYS A . n A 1 49 ILE 49 1656 1656 ILE ILE A . n A 1 50 ASN 50 1657 1657 ASN ASN A . n A 1 51 CYS 51 1658 1658 CYS CYS A . n A 1 52 ALA 52 1659 1659 ALA ALA A . n B 2 1 ALA 1 1 1 ALA ALA B . n B 2 2 ARG 2 2 2 ARG ARG B . n B 2 3 THR 3 3 3 THR THR B . n B 2 4 M3L 4 4 4 M3L M3L B . n B 2 5 GLN 5 5 5 GLN GLN B . n B 2 6 THR 6 6 6 THR THR B . n B 2 7 ALA 7 7 7 ALA ALA B . n B 2 8 ARG 8 8 8 ARG ARG B . n B 2 9 LYS 9 9 ? ? ? B . n # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id M3L _pdbx_struct_mod_residue.label_seq_id 4 _pdbx_struct_mod_residue.auth_asym_id B _pdbx_struct_mod_residue.auth_comp_id M3L _pdbx_struct_mod_residue.auth_seq_id 4 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id LYS _pdbx_struct_mod_residue.details N-TRIMETHYLLYSINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4010 ? 1 MORE -20 ? 1 'SSA (A^2)' 7300 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_445 -x-1,-y-1,z -1.0000000000 0.0000000000 0.0000000000 -49.9500000000 0.0000000000 -1.0000000000 0.0000000000 -49.9500000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N ? A SER 1 ? A SER 1608 ? 1_555 ZN ? C ZN . ? A ZN 1 ? 1_555 O ? A SER 1 ? A SER 1608 ? 1_555 84.3 ? 2 N ? A SER 1 ? A SER 1608 ? 1_555 ZN ? C ZN . ? A ZN 1 ? 1_555 SG ? A CYS 12 ? A CYS 1619 ? 1_555 111.1 ? 3 O ? A SER 1 ? A SER 1608 ? 1_555 ZN ? C ZN . ? A ZN 1 ? 1_555 SG ? A CYS 12 ? A CYS 1619 ? 1_555 99.6 ? 4 N ? A SER 1 ? A SER 1608 ? 1_555 ZN ? C ZN . ? A ZN 1 ? 1_555 O ? F HOH . ? A HOH 23 ? 1_555 136.1 ? 5 O ? A SER 1 ? A SER 1608 ? 1_555 ZN ? C ZN . ? A ZN 1 ? 1_555 O ? F HOH . ? A HOH 23 ? 1_555 89.8 ? 6 SG ? A CYS 12 ? A CYS 1619 ? 1_555 ZN ? C ZN . ? A ZN 1 ? 1_555 O ? F HOH . ? A HOH 23 ? 1_555 112.7 ? 7 SG ? A CYS 3 ? A CYS 1610 ? 1_555 ZN ? D ZN . ? A ZN 2 ? 1_555 SG ? A CYS 8 ? A CYS 1615 ? 1_555 112.7 ? 8 SG ? A CYS 21 ? A CYS 1628 ? 1_555 ZN ? E ZN . ? A ZN 3 ? 1_555 SG ? A CYS 25 ? A CYS 1632 ? 1_555 109.7 ? 9 SG ? A CYS 21 ? A CYS 1628 ? 1_555 ZN ? E ZN . ? A ZN 3 ? 1_555 SG ? A CYS 48 ? A CYS 1655 ? 1_555 109.3 ? 10 SG ? A CYS 25 ? A CYS 1632 ? 1_555 ZN ? E ZN . ? A ZN 3 ? 1_555 SG ? A CYS 48 ? A CYS 1655 ? 1_555 114.1 ? 11 SG ? A CYS 21 ? A CYS 1628 ? 1_555 ZN ? E ZN . ? A ZN 3 ? 1_555 SG ? A CYS 51 ? A CYS 1658 ? 1_555 112.2 ? 12 SG ? A CYS 25 ? A CYS 1632 ? 1_555 ZN ? E ZN . ? A ZN 3 ? 1_555 SG ? A CYS 51 ? A CYS 1658 ? 1_555 106.9 ? 13 SG ? A CYS 48 ? A CYS 1655 ? 1_555 ZN ? E ZN . ? A ZN 3 ? 1_555 SG ? A CYS 51 ? A CYS 1658 ? 1_555 104.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-05-05 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASES phasing . ? 2 CNS refinement 1.1 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 1614 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -116.13 _pdbx_validate_torsion.psi 70.32 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id B _pdbx_unobs_or_zero_occ_residues.auth_comp_id LYS _pdbx_unobs_or_zero_occ_residues.auth_seq_id 9 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id B _pdbx_unobs_or_zero_occ_residues.label_comp_id LYS _pdbx_unobs_or_zero_occ_residues.label_seq_id 9 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN 1 1 1 ZN ZN A . D 3 ZN 1 2 2 ZN ZN A . E 3 ZN 1 3 3 ZN ZN A . F 4 HOH 1 6 6 HOH HOH A . F 4 HOH 2 7 7 HOH HOH A . F 4 HOH 3 8 8 HOH HOH A . F 4 HOH 4 9 9 HOH HOH A . F 4 HOH 5 10 10 HOH HOH A . F 4 HOH 6 11 11 HOH HOH A . F 4 HOH 7 12 12 HOH HOH A . F 4 HOH 8 13 13 HOH HOH A . F 4 HOH 9 14 14 HOH HOH A . F 4 HOH 10 15 15 HOH HOH A . F 4 HOH 11 16 16 HOH HOH A . F 4 HOH 12 17 17 HOH HOH A . F 4 HOH 13 18 18 HOH HOH A . F 4 HOH 14 19 19 HOH HOH A . F 4 HOH 15 20 20 HOH HOH A . F 4 HOH 16 21 21 HOH HOH A . F 4 HOH 17 22 22 HOH HOH A . F 4 HOH 18 23 23 HOH HOH A . F 4 HOH 19 24 24 HOH HOH A . F 4 HOH 20 25 25 HOH HOH A . F 4 HOH 21 26 26 HOH HOH A . F 4 HOH 22 27 27 HOH HOH A . F 4 HOH 23 28 28 HOH HOH A . F 4 HOH 24 29 29 HOH HOH A . F 4 HOH 25 30 30 HOH HOH A . F 4 HOH 26 31 31 HOH HOH A . F 4 HOH 27 32 32 HOH HOH A . F 4 HOH 28 33 33 HOH HOH A . F 4 HOH 29 34 34 HOH HOH A . F 4 HOH 30 35 35 HOH HOH A . G 4 HOH 1 36 36 HOH HOH B . G 4 HOH 2 37 37 HOH HOH B . #