HEADER STRUCTURAL PROTEIN 12-MAR-09 3GLD TITLE CRYSTAL STRUCTURE OF THE MAJOR PILIN FROM STREPTOCOCCUS PYOGENES E117A TITLE 2 MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: PILIN; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: RESIDUES 18-308; COMPND 5 SYNONYM: PILUS BACKBONE STRUCTURAL PROTEIN, LANCEFIELD T ANTIGEN; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PYOGENES SEROTYPE M1; SOURCE 3 ORGANISM_TAXID: 301447; SOURCE 4 STRAIN: M1, SF370; SOURCE 5 GENE: M5005_SPY0109, SPY0128, SPY_0128; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX3C KEYWDS ALL-BETA, PILI, CELL ADHESION, STRUCTURAL PROTEIN, ISOPEPTIDE, CELL KEYWDS 2 WALL, FIMBRIUM, ISOPEPTIDE BOND, MEMBRANE, PEPTIDOGLYCAN-ANCHOR, KEYWDS 3 SECRETED EXPDTA X-RAY DIFFRACTION AUTHOR H.J.KANG,E.N.BAKER REVDAT 4 01-NOV-23 3GLD 1 REMARK REVDAT 3 10-NOV-21 3GLD 1 SEQADV LINK REVDAT 2 13-JUL-11 3GLD 1 VERSN REVDAT 1 02-JUN-09 3GLD 0 JRNL AUTH H.J.KANG,E.N.BAKER JRNL TITL INTRAMOLECULAR ISOPEPTIDE BONDS GIVE THERMODYNAMIC AND JRNL TITL 2 PROTEOLYTIC STABILITY TO THE MAJOR PILIN PROTEIN OF JRNL TITL 3 STREPTOCOCCUS PYOGENES JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.03 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 3 NUMBER OF REFLECTIONS : 51404 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.265 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2732 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.03 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3258 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 81.85 REMARK 3 BIN R VALUE (WORKING SET) : 0.2480 REMARK 3 BIN FREE R VALUE SET COUNT : 164 REMARK 3 BIN FREE R VALUE : 0.3700 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6626 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 550 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 32.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.33000 REMARK 3 B22 (A**2) : 0.33000 REMARK 3 B33 (A**2) : -1.26000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.28000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.253 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.209 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.147 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.989 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.926 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6826 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9276 ; 1.303 ; 1.957 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 878 ; 6.956 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 294 ;36.398 ;26.803 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1223 ;13.890 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 3 ; 9.645 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1080 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5067 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4275 ; 0.638 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7009 ; 1.186 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2551 ; 1.858 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2253 ; 3.101 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 14 A 307 REMARK 3 ORIGIN FOR THE GROUP (A): 0.6360 15.4380 61.4240 REMARK 3 T TENSOR REMARK 3 T11: 0.0281 T22: -0.0583 REMARK 3 T33: -0.0645 T12: -0.0431 REMARK 3 T13: 0.0656 T23: -0.0003 REMARK 3 L TENSOR REMARK 3 L11: 0.4091 L22: 0.0496 REMARK 3 L33: 2.0234 L12: -0.1417 REMARK 3 L13: -0.7613 L23: 0.2820 REMARK 3 S TENSOR REMARK 3 S11: 0.0117 S12: 0.0883 S13: 0.0399 REMARK 3 S21: 0.0157 S22: 0.0271 S23: -0.0260 REMARK 3 S31: 0.0506 S32: -0.1793 S33: -0.0387 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 28 B 307 REMARK 3 ORIGIN FOR THE GROUP (A): -33.0690 15.4340 147.3620 REMARK 3 T TENSOR REMARK 3 T11: -0.0040 T22: -0.0353 REMARK 3 T33: -0.0749 T12: -0.0114 REMARK 3 T13: 0.0362 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 0.7546 L22: 0.0861 REMARK 3 L33: 3.3657 L12: 0.0992 REMARK 3 L13: -1.4867 L23: -0.2606 REMARK 3 S TENSOR REMARK 3 S11: 0.0141 S12: 0.1458 S13: 0.0446 REMARK 3 S21: 0.0075 S22: 0.0287 S23: 0.0088 REMARK 3 S31: -0.0472 S32: -0.2008 S33: -0.0428 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 28 C 307 REMARK 3 ORIGIN FOR THE GROUP (A): 36.6900 18.1810 -20.7270 REMARK 3 T TENSOR REMARK 3 T11: 0.0030 T22: -0.0911 REMARK 3 T33: -0.0831 T12: 0.0581 REMARK 3 T13: 0.0755 T23: 0.0160 REMARK 3 L TENSOR REMARK 3 L11: 0.8210 L22: 0.0781 REMARK 3 L33: 8.5401 L12: -0.0211 REMARK 3 L13: -2.2624 L23: 0.4278 REMARK 3 S TENSOR REMARK 3 S11: -0.0283 S12: -0.1064 S13: -0.0286 REMARK 3 S21: 0.0000 S22: -0.0750 S23: -0.0028 REMARK 3 S31: 0.0989 S32: 0.2794 S33: 0.1032 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3GLD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 17-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1000052005. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAY-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : OSMIC REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54403 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.030 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04900 REMARK 200 FOR THE DATA SET : 32.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.03 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.27800 REMARK 200 FOR SHELL : 5.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: PDB ENTRY 3B2M REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M POTASSIUM ACETATE, 20% PEG 3350, REMARK 280 PH 8.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 26.07450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 308 REMARK 465 GLY B 14 REMARK 465 PRO B 15 REMARK 465 GLY B 16 REMARK 465 SER B 17 REMARK 465 ALA B 18 REMARK 465 THR B 19 REMARK 465 THR B 20 REMARK 465 VAL B 21 REMARK 465 HIS B 22 REMARK 465 GLY B 23 REMARK 465 GLU B 24 REMARK 465 THR B 25 REMARK 465 VAL B 26 REMARK 465 VAL B 27 REMARK 465 GLU B 308 REMARK 465 GLY C 14 REMARK 465 PRO C 15 REMARK 465 GLY C 16 REMARK 465 SER C 17 REMARK 465 ALA C 18 REMARK 465 THR C 19 REMARK 465 THR C 20 REMARK 465 VAL C 21 REMARK 465 HIS C 22 REMARK 465 GLY C 23 REMARK 465 GLU C 24 REMARK 465 THR C 25 REMARK 465 VAL C 26 REMARK 465 VAL C 27 REMARK 465 ASN C 28 REMARK 465 GLU C 308 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 65 -169.82 -125.93 REMARK 500 ASP A 65 -167.07 -128.79 REMARK 500 SER A 207 -13.00 81.40 REMARK 500 THR A 293 -169.92 -116.52 REMARK 500 SER B 207 -5.13 83.79 REMARK 500 THR B 293 -167.97 -115.16 REMARK 500 ASN C 92 9.83 56.59 REMARK 500 LYS C 157 -72.93 -109.69 REMARK 500 SER C 207 -0.61 81.01 REMARK 500 ASP C 276 70.51 -112.32 REMARK 500 ALA C 278 75.11 -64.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3B2M RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE MAJOR PILIN FROM STREPTOCOCCUS PYOGENES REMARK 900 RELATED ID: 3GLE RELATED DB: PDB DBREF 3GLD A 18 308 UNP Q9A1S2 PILIN_STRP1 18 308 DBREF 3GLD B 18 308 UNP Q9A1S2 PILIN_STRP1 18 308 DBREF 3GLD C 18 308 UNP Q9A1S2 PILIN_STRP1 18 308 SEQADV 3GLD GLY A 14 UNP Q9A1S2 EXPRESSION TAG SEQADV 3GLD PRO A 15 UNP Q9A1S2 EXPRESSION TAG SEQADV 3GLD GLY A 16 UNP Q9A1S2 EXPRESSION TAG SEQADV 3GLD SER A 17 UNP Q9A1S2 EXPRESSION TAG SEQADV 3GLD ALA A 117 UNP Q9A1S2 GLU 117 ENGINEERED MUTATION SEQADV 3GLD VAL A 306 UNP Q9A1S2 ASP 306 ENGINEERED MUTATION SEQADV 3GLD GLY B 14 UNP Q9A1S2 EXPRESSION TAG SEQADV 3GLD PRO B 15 UNP Q9A1S2 EXPRESSION TAG SEQADV 3GLD GLY B 16 UNP Q9A1S2 EXPRESSION TAG SEQADV 3GLD SER B 17 UNP Q9A1S2 EXPRESSION TAG SEQADV 3GLD ALA B 117 UNP Q9A1S2 GLU 117 ENGINEERED MUTATION SEQADV 3GLD VAL B 306 UNP Q9A1S2 ASP 306 ENGINEERED MUTATION SEQADV 3GLD GLY C 14 UNP Q9A1S2 EXPRESSION TAG SEQADV 3GLD PRO C 15 UNP Q9A1S2 EXPRESSION TAG SEQADV 3GLD GLY C 16 UNP Q9A1S2 EXPRESSION TAG SEQADV 3GLD SER C 17 UNP Q9A1S2 EXPRESSION TAG SEQADV 3GLD ALA C 117 UNP Q9A1S2 GLU 117 ENGINEERED MUTATION SEQADV 3GLD VAL C 306 UNP Q9A1S2 ASP 306 ENGINEERED MUTATION SEQRES 1 A 295 GLY PRO GLY SER ALA THR THR VAL HIS GLY GLU THR VAL SEQRES 2 A 295 VAL ASN GLY ALA LYS LEU THR VAL THR LYS ASN LEU ASP SEQRES 3 A 295 LEU VAL ASN SER ASN ALA LEU ILE PRO ASN THR ASP PHE SEQRES 4 A 295 THR PHE LYS ILE GLU PRO ASP THR THR VAL ASN GLU ASP SEQRES 5 A 295 GLY ASN LYS PHE LYS GLY VAL ALA LEU ASN THR PRO MET SEQRES 6 A 295 THR LYS VAL THR TYR THR ASN SER ASP LYS GLY GLY SER SEQRES 7 A 295 ASN THR LYS THR ALA GLU PHE ASP PHE SER GLU VAL THR SEQRES 8 A 295 PHE GLU LYS PRO GLY VAL TYR TYR TYR LYS VAL THR ALA SEQRES 9 A 295 GLU LYS ILE ASP LYS VAL PRO GLY VAL SER TYR ASP THR SEQRES 10 A 295 THR SER TYR THR VAL GLN VAL HIS VAL LEU TRP ASN GLU SEQRES 11 A 295 GLU GLN GLN LYS PRO VAL ALA THR TYR ILE VAL GLY TYR SEQRES 12 A 295 LYS GLU GLY SER LYS VAL PRO ILE GLN PHE LYS ASN SER SEQRES 13 A 295 LEU ASP SER THR THR LEU THR VAL LYS LYS LYS VAL SER SEQRES 14 A 295 GLY THR GLY GLY ASP ARG SER LYS ASP PHE ASN PHE GLY SEQRES 15 A 295 LEU THR LEU LYS ALA ASN GLN TYR TYR LYS ALA SER GLU SEQRES 16 A 295 LYS VAL MET ILE GLU LYS THR THR LYS GLY GLY GLN ALA SEQRES 17 A 295 PRO VAL GLN THR GLU ALA SER ILE ASP GLN LEU TYR HIS SEQRES 18 A 295 PHE THR LEU LYS ASP GLY GLU SER ILE LYS VAL THR ASN SEQRES 19 A 295 LEU PRO VAL GLY VAL ASP TYR VAL VAL THR GLU ASP ASP SEQRES 20 A 295 TYR LYS SER GLU LYS TYR THR THR ASN VAL GLU VAL SER SEQRES 21 A 295 PRO GLN ASP GLY ALA VAL LYS ASN ILE ALA GLY ASN SER SEQRES 22 A 295 THR GLU GLN GLU THR SER THR ASP LYS ASP MET THR ILE SEQRES 23 A 295 THR PHE THR ASN LYS LYS VAL PHE GLU SEQRES 1 B 295 GLY PRO GLY SER ALA THR THR VAL HIS GLY GLU THR VAL SEQRES 2 B 295 VAL ASN GLY ALA LYS LEU THR VAL THR LYS ASN LEU ASP SEQRES 3 B 295 LEU VAL ASN SER ASN ALA LEU ILE PRO ASN THR ASP PHE SEQRES 4 B 295 THR PHE LYS ILE GLU PRO ASP THR THR VAL ASN GLU ASP SEQRES 5 B 295 GLY ASN LYS PHE LYS GLY VAL ALA LEU ASN THR PRO MET SEQRES 6 B 295 THR LYS VAL THR TYR THR ASN SER ASP LYS GLY GLY SER SEQRES 7 B 295 ASN THR LYS THR ALA GLU PHE ASP PHE SER GLU VAL THR SEQRES 8 B 295 PHE GLU LYS PRO GLY VAL TYR TYR TYR LYS VAL THR ALA SEQRES 9 B 295 GLU LYS ILE ASP LYS VAL PRO GLY VAL SER TYR ASP THR SEQRES 10 B 295 THR SER TYR THR VAL GLN VAL HIS VAL LEU TRP ASN GLU SEQRES 11 B 295 GLU GLN GLN LYS PRO VAL ALA THR TYR ILE VAL GLY TYR SEQRES 12 B 295 LYS GLU GLY SER LYS VAL PRO ILE GLN PHE LYS ASN SER SEQRES 13 B 295 LEU ASP SER THR THR LEU THR VAL LYS LYS LYS VAL SER SEQRES 14 B 295 GLY THR GLY GLY ASP ARG SER LYS ASP PHE ASN PHE GLY SEQRES 15 B 295 LEU THR LEU LYS ALA ASN GLN TYR TYR LYS ALA SER GLU SEQRES 16 B 295 LYS VAL MET ILE GLU LYS THR THR LYS GLY GLY GLN ALA SEQRES 17 B 295 PRO VAL GLN THR GLU ALA SER ILE ASP GLN LEU TYR HIS SEQRES 18 B 295 PHE THR LEU LYS ASP GLY GLU SER ILE LYS VAL THR ASN SEQRES 19 B 295 LEU PRO VAL GLY VAL ASP TYR VAL VAL THR GLU ASP ASP SEQRES 20 B 295 TYR LYS SER GLU LYS TYR THR THR ASN VAL GLU VAL SER SEQRES 21 B 295 PRO GLN ASP GLY ALA VAL LYS ASN ILE ALA GLY ASN SER SEQRES 22 B 295 THR GLU GLN GLU THR SER THR ASP LYS ASP MET THR ILE SEQRES 23 B 295 THR PHE THR ASN LYS LYS VAL PHE GLU SEQRES 1 C 295 GLY PRO GLY SER ALA THR THR VAL HIS GLY GLU THR VAL SEQRES 2 C 295 VAL ASN GLY ALA LYS LEU THR VAL THR LYS ASN LEU ASP SEQRES 3 C 295 LEU VAL ASN SER ASN ALA LEU ILE PRO ASN THR ASP PHE SEQRES 4 C 295 THR PHE LYS ILE GLU PRO ASP THR THR VAL ASN GLU ASP SEQRES 5 C 295 GLY ASN LYS PHE LYS GLY VAL ALA LEU ASN THR PRO MET SEQRES 6 C 295 THR LYS VAL THR TYR THR ASN SER ASP LYS GLY GLY SER SEQRES 7 C 295 ASN THR LYS THR ALA GLU PHE ASP PHE SER GLU VAL THR SEQRES 8 C 295 PHE GLU LYS PRO GLY VAL TYR TYR TYR LYS VAL THR ALA SEQRES 9 C 295 GLU LYS ILE ASP LYS VAL PRO GLY VAL SER TYR ASP THR SEQRES 10 C 295 THR SER TYR THR VAL GLN VAL HIS VAL LEU TRP ASN GLU SEQRES 11 C 295 GLU GLN GLN LYS PRO VAL ALA THR TYR ILE VAL GLY TYR SEQRES 12 C 295 LYS GLU GLY SER LYS VAL PRO ILE GLN PHE LYS ASN SER SEQRES 13 C 295 LEU ASP SER THR THR LEU THR VAL LYS LYS LYS VAL SER SEQRES 14 C 295 GLY THR GLY GLY ASP ARG SER LYS ASP PHE ASN PHE GLY SEQRES 15 C 295 LEU THR LEU LYS ALA ASN GLN TYR TYR LYS ALA SER GLU SEQRES 16 C 295 LYS VAL MET ILE GLU LYS THR THR LYS GLY GLY GLN ALA SEQRES 17 C 295 PRO VAL GLN THR GLU ALA SER ILE ASP GLN LEU TYR HIS SEQRES 18 C 295 PHE THR LEU LYS ASP GLY GLU SER ILE LYS VAL THR ASN SEQRES 19 C 295 LEU PRO VAL GLY VAL ASP TYR VAL VAL THR GLU ASP ASP SEQRES 20 C 295 TYR LYS SER GLU LYS TYR THR THR ASN VAL GLU VAL SER SEQRES 21 C 295 PRO GLN ASP GLY ALA VAL LYS ASN ILE ALA GLY ASN SER SEQRES 22 C 295 THR GLU GLN GLU THR SER THR ASP LYS ASP MET THR ILE SEQRES 23 C 295 THR PHE THR ASN LYS LYS VAL PHE GLU FORMUL 4 HOH *550(H2 O) HELIX 1 1 THR A 84 LYS A 88 5 5 HELIX 2 2 TYR A 261 LYS A 265 5 5 HELIX 3 3 THR B 84 LYS B 88 5 5 HELIX 4 4 TYR B 261 LYS B 265 5 5 HELIX 5 5 THR C 84 LYS C 88 5 5 HELIX 6 6 SER C 101 VAL C 103 5 3 HELIX 7 7 TYR C 261 LYS C 265 5 5 SHEET 1 A 4 THR A 93 ASP A 99 0 SHEET 2 A 4 LYS A 31 LEU A 40 -1 N LYS A 36 O LYS A 94 SHEET 3 A 4 ILE A 164 LEU A 170 1 O LEU A 170 N ASP A 39 SHEET 4 A 4 VAL A 126 SER A 127 -1 N SER A 127 O SER A 169 SHEET 1 B 4 LYS A 68 LYS A 70 0 SHEET 2 B 4 GLY A 109 ALA A 117 1 O VAL A 110 N PHE A 69 SHEET 3 B 4 THR A 50 PRO A 58 -1 N GLU A 57 O LYS A 114 SHEET 4 B 4 MET A 78 TYR A 83 -1 O THR A 79 N PHE A 54 SHEET 1 C 5 LYS A 68 LYS A 70 0 SHEET 2 C 5 GLY A 109 ALA A 117 1 O VAL A 110 N PHE A 69 SHEET 3 C 5 SER A 132 ASN A 142 -1 O VAL A 135 N TYR A 113 SHEET 4 C 5 LYS A 147 LYS A 157 -1 O VAL A 149 N LEU A 140 SHEET 5 C 5 SER A 160 LYS A 161 -1 O SER A 160 N LYS A 157 SHEET 1 D 7 VAL A 223 SER A 228 0 SHEET 2 D 7 LYS A 209 THR A 215 -1 N ILE A 212 O THR A 225 SHEET 3 D 7 SER A 242 PRO A 249 -1 O SER A 242 N THR A 215 SHEET 4 D 7 SER A 172 SER A 182 -1 N THR A 173 O LEU A 248 SHEET 5 D 7 MET A 297 LYS A 304 1 O PHE A 301 N LYS A 178 SHEET 6 D 7 THR A 267 PRO A 274 -1 N ASN A 269 O THR A 302 SHEET 7 D 7 LYS A 280 ALA A 283 -1 O ILE A 282 N VAL A 270 SHEET 1 E 4 TYR A 233 LEU A 237 0 SHEET 2 E 4 PHE A 192 LEU A 198 -1 N LEU A 196 O TYR A 233 SHEET 3 E 4 ASP A 253 GLU A 258 -1 O THR A 257 N GLY A 195 SHEET 4 E 4 GLU A 290 THR A 291 -1 O GLU A 290 N TYR A 254 SHEET 1 F 4 THR B 93 ASP B 99 0 SHEET 2 F 4 LYS B 31 LEU B 40 -1 N LYS B 36 O LYS B 94 SHEET 3 F 4 ILE B 164 LEU B 170 1 O LEU B 170 N ASP B 39 SHEET 4 F 4 VAL B 126 SER B 127 -1 N SER B 127 O SER B 169 SHEET 1 G 4 LYS B 68 LYS B 70 0 SHEET 2 G 4 GLY B 109 GLU B 118 1 O VAL B 110 N PHE B 69 SHEET 3 G 4 THR B 50 PRO B 58 -1 N THR B 53 O GLU B 118 SHEET 4 G 4 MET B 78 TYR B 83 -1 O TYR B 83 N THR B 50 SHEET 1 H 5 LYS B 68 LYS B 70 0 SHEET 2 H 5 GLY B 109 GLU B 118 1 O VAL B 110 N PHE B 69 SHEET 3 H 5 SER B 132 ASN B 142 -1 O VAL B 139 N GLY B 109 SHEET 4 H 5 LYS B 147 LYS B 157 -1 O TYR B 152 N HIS B 138 SHEET 5 H 5 SER B 160 LYS B 161 -1 O SER B 160 N LYS B 157 SHEET 1 I 7 VAL B 223 SER B 228 0 SHEET 2 I 7 LYS B 209 THR B 215 -1 N ILE B 212 O THR B 225 SHEET 3 I 7 SER B 242 PRO B 249 -1 O SER B 242 N THR B 215 SHEET 4 I 7 SER B 172 SER B 182 -1 N THR B 173 O LEU B 248 SHEET 5 I 7 MET B 297 LYS B 304 1 O ILE B 299 N THR B 176 SHEET 6 I 7 THR B 267 PRO B 274 -1 N ASN B 269 O THR B 302 SHEET 7 I 7 LYS B 280 ALA B 283 -1 O LYS B 280 N VAL B 272 SHEET 1 J 4 TYR B 233 LEU B 237 0 SHEET 2 J 4 PHE B 192 LEU B 198 -1 N PHE B 194 O PHE B 235 SHEET 3 J 4 ASP B 253 GLU B 258 -1 O THR B 257 N GLY B 195 SHEET 4 J 4 GLU B 290 THR B 291 -1 O GLU B 290 N TYR B 254 SHEET 1 K 4 THR C 93 ASP C 99 0 SHEET 2 K 4 LYS C 31 LEU C 40 -1 N VAL C 34 O ALA C 96 SHEET 3 K 4 ILE C 164 LEU C 170 1 O LEU C 170 N ASP C 39 SHEET 4 K 4 VAL C 126 SER C 127 -1 N SER C 127 O SER C 169 SHEET 1 L 4 LYS C 68 LYS C 70 0 SHEET 2 L 4 GLY C 109 ALA C 117 1 O VAL C 110 N PHE C 69 SHEET 3 L 4 THR C 50 PRO C 58 -1 N GLU C 57 O LYS C 114 SHEET 4 L 4 MET C 78 TYR C 83 -1 O VAL C 81 N PHE C 52 SHEET 1 M 4 LYS C 68 LYS C 70 0 SHEET 2 M 4 GLY C 109 ALA C 117 1 O VAL C 110 N PHE C 69 SHEET 3 M 4 SER C 132 ASN C 142 -1 O TYR C 133 N VAL C 115 SHEET 4 M 4 LYS C 147 TYR C 156 -1 O THR C 151 N HIS C 138 SHEET 1 N 7 VAL C 223 SER C 228 0 SHEET 2 N 7 LYS C 209 THR C 215 -1 N ILE C 212 O THR C 225 SHEET 3 N 7 SER C 242 LEU C 248 -1 O SER C 242 N THR C 215 SHEET 4 N 7 THR C 173 SER C 182 -1 N THR C 173 O LEU C 248 SHEET 5 N 7 MET C 297 LYS C 304 1 O ILE C 299 N THR C 176 SHEET 6 N 7 THR C 267 PRO C 274 -1 N GLU C 271 O THR C 300 SHEET 7 N 7 LYS C 280 ALA C 283 -1 O ILE C 282 N VAL C 270 SHEET 1 O 4 TYR C 233 LEU C 237 0 SHEET 2 O 4 PHE C 192 LEU C 198 -1 N PHE C 194 O PHE C 235 SHEET 3 O 4 ASP C 253 GLU C 258 -1 O THR C 257 N GLY C 195 SHEET 4 O 4 GLU C 290 THR C 291 -1 O GLU C 290 N TYR C 254 LINK NZ LYS A 179 CG ASN A 303 1555 1555 1.57 LINK NZ LYS B 179 CG ASN B 303 1555 1555 1.57 LINK NZ LYS C 179 CG ASN C 303 1555 1555 1.64 CRYST1 67.307 52.149 127.316 90.00 98.83 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014857 0.000000 0.002308 0.00000 SCALE2 0.000000 0.019176 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007949 0.00000