data_3GM5 # _entry.id 3GM5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3GM5 pdb_00003gm5 10.2210/pdb3gm5/pdb RCSB RCSB052032 ? ? WWPDB D_1000052032 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-09-22 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-04 4 'Structure model' 1 3 2024-03-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' diffrn_detector 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' struct_ref_seq_dif 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_diffrn_detector.detector' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_struct_ref_seq_dif.details' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3GM5 _pdbx_database_status.recvd_initial_deposition_date 2009-03-12 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Liang, D.-C.' 1 'Shi, L.' 2 'Gao, P.' 3 'Yan, X.-X.' 4 # _citation.id primary _citation.title 'Crystal structure of a putative methylmalonyl-coenzyme a epimerase from Thermoanaerobacter tengcongensis at 2.0 A resolution' _citation.journal_abbrev Proteins _citation.journal_volume 77 _citation.page_first 994 _citation.page_last 999 _citation.year 2009 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19731367 _citation.pdbx_database_id_DOI 10.1002/prot.22528 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shi, L.' 1 ? primary 'Gao, P.' 2 ? primary 'Yan, X.-X.' 3 ? primary 'Liang, D.-C.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Lactoylglutathione lyase and related lyases' 18780.398 1 5.1.99.1 ? ? ? 2 non-polymer syn 'CITRIC ACID' 192.124 1 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 4 water nat water 18.015 126 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'putative methylmalonyl-coenzyme A epimerase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MSHHHHHHSMSKNILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPL QLELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDFEGGRYAYIDTLRALKVMIELLENY ; _entity_poly.pdbx_seq_one_letter_code_can ;MSHHHHHHSMSKNILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPL QLELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDFEGGRYAYIDTLRALKVMIELLENY ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CITRIC ACID' CIT 3 'SULFATE ION' SO4 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 SER n 1 10 MET n 1 11 SER n 1 12 LYS n 1 13 ASN n 1 14 ILE n 1 15 LEU n 1 16 ASP n 1 17 MET n 1 18 ARG n 1 19 ASN n 1 20 THR n 1 21 VAL n 1 22 GLN n 1 23 ILE n 1 24 GLY n 1 25 ILE n 1 26 VAL n 1 27 VAL n 1 28 ARG n 1 29 ASP n 1 30 ILE n 1 31 GLU n 1 32 GLU n 1 33 SER n 1 34 LEU n 1 35 GLN n 1 36 ASN n 1 37 TYR n 1 38 ALA n 1 39 GLU n 1 40 PHE n 1 41 PHE n 1 42 GLY n 1 43 VAL n 1 44 GLU n 1 45 LYS n 1 46 PRO n 1 47 GLN n 1 48 TRP n 1 49 PHE n 1 50 TRP n 1 51 THR n 1 52 ASP n 1 53 ASP n 1 54 TYR n 1 55 SER n 1 56 LYS n 1 57 ALA n 1 58 HIS n 1 59 THR n 1 60 LYS n 1 61 PHE n 1 62 ASN n 1 63 GLY n 1 64 ARG n 1 65 PRO n 1 66 THR n 1 67 LYS n 1 68 ALA n 1 69 ARG n 1 70 ALA n 1 71 LYS n 1 72 LEU n 1 73 ALA n 1 74 PHE n 1 75 PHE n 1 76 GLU n 1 77 LEU n 1 78 GLY n 1 79 PRO n 1 80 LEU n 1 81 GLN n 1 82 LEU n 1 83 GLU n 1 84 LEU n 1 85 ILE n 1 86 GLU n 1 87 PRO n 1 88 ASP n 1 89 GLU n 1 90 ASN n 1 91 PRO n 1 92 SER n 1 93 THR n 1 94 TRP n 1 95 ARG n 1 96 GLU n 1 97 PHE n 1 98 LEU n 1 99 ASP n 1 100 LYS n 1 101 ASN n 1 102 GLY n 1 103 GLU n 1 104 GLY n 1 105 ILE n 1 106 HIS n 1 107 HIS n 1 108 ILE n 1 109 ALA n 1 110 PHE n 1 111 VAL n 1 112 VAL n 1 113 LYS n 1 114 ASP n 1 115 MET n 1 116 ASP n 1 117 ARG n 1 118 LYS n 1 119 VAL n 1 120 GLU n 1 121 GLU n 1 122 LEU n 1 123 TYR n 1 124 ARG n 1 125 LYS n 1 126 GLY n 1 127 MET n 1 128 LYS n 1 129 VAL n 1 130 ILE n 1 131 GLN n 1 132 LYS n 1 133 GLY n 1 134 ASP n 1 135 PHE n 1 136 GLU n 1 137 GLY n 1 138 GLY n 1 139 ARG n 1 140 TYR n 1 141 ALA n 1 142 TYR n 1 143 ILE n 1 144 ASP n 1 145 THR n 1 146 LEU n 1 147 ARG n 1 148 ALA n 1 149 LEU n 1 150 LYS n 1 151 VAL n 1 152 MET n 1 153 ILE n 1 154 GLU n 1 155 LEU n 1 156 LEU n 1 157 GLU n 1 158 ASN n 1 159 TYR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'GloA, TTE0360' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain MB4 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details 'Thermoanaerobacter tengcongensis' _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermoanaerobacter tengcongensis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 273068 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pHAT-2 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CIT non-polymer . 'CITRIC ACID' ? 'C6 H8 O7' 192.124 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -8 ? ? ? A . n A 1 2 SER 2 -7 ? ? ? A . n A 1 3 HIS 3 -6 ? ? ? A . n A 1 4 HIS 4 -5 ? ? ? A . n A 1 5 HIS 5 -4 ? ? ? A . n A 1 6 HIS 6 -3 ? ? ? A . n A 1 7 HIS 7 -2 ? ? ? A . n A 1 8 HIS 8 -1 ? ? ? A . n A 1 9 SER 9 0 0 SER SER A . n A 1 10 MET 10 1 1 MET MET A . n A 1 11 SER 11 2 2 SER SER A . n A 1 12 LYS 12 3 3 LYS LYS A . n A 1 13 ASN 13 4 4 ASN ASN A . n A 1 14 ILE 14 5 5 ILE ILE A . n A 1 15 LEU 15 6 6 LEU LEU A . n A 1 16 ASP 16 7 7 ASP ASP A . n A 1 17 MET 17 8 8 MET MET A . n A 1 18 ARG 18 9 9 ARG ARG A . n A 1 19 ASN 19 10 10 ASN ASN A . n A 1 20 THR 20 11 11 THR THR A . n A 1 21 VAL 21 12 12 VAL VAL A . n A 1 22 GLN 22 13 13 GLN GLN A . n A 1 23 ILE 23 14 14 ILE ILE A . n A 1 24 GLY 24 15 15 GLY GLY A . n A 1 25 ILE 25 16 16 ILE ILE A . n A 1 26 VAL 26 17 17 VAL VAL A . n A 1 27 VAL 27 18 18 VAL VAL A . n A 1 28 ARG 28 19 19 ARG ARG A . n A 1 29 ASP 29 20 20 ASP ASP A . n A 1 30 ILE 30 21 21 ILE ILE A . n A 1 31 GLU 31 22 22 GLU GLU A . n A 1 32 GLU 32 23 23 GLU GLU A . n A 1 33 SER 33 24 24 SER SER A . n A 1 34 LEU 34 25 25 LEU LEU A . n A 1 35 GLN 35 26 26 GLN GLN A . n A 1 36 ASN 36 27 27 ASN ASN A . n A 1 37 TYR 37 28 28 TYR TYR A . n A 1 38 ALA 38 29 29 ALA ALA A . n A 1 39 GLU 39 30 30 GLU GLU A . n A 1 40 PHE 40 31 31 PHE PHE A . n A 1 41 PHE 41 32 32 PHE PHE A . n A 1 42 GLY 42 33 33 GLY GLY A . n A 1 43 VAL 43 34 34 VAL VAL A . n A 1 44 GLU 44 35 35 GLU GLU A . n A 1 45 LYS 45 36 36 LYS LYS A . n A 1 46 PRO 46 37 37 PRO PRO A . n A 1 47 GLN 47 38 38 GLN GLN A . n A 1 48 TRP 48 39 39 TRP TRP A . n A 1 49 PHE 49 40 40 PHE PHE A . n A 1 50 TRP 50 41 41 TRP TRP A . n A 1 51 THR 51 42 42 THR THR A . n A 1 52 ASP 52 43 43 ASP ASP A . n A 1 53 ASP 53 44 44 ASP ASP A . n A 1 54 TYR 54 45 45 TYR TYR A . n A 1 55 SER 55 46 46 SER SER A . n A 1 56 LYS 56 47 47 LYS LYS A . n A 1 57 ALA 57 48 48 ALA ALA A . n A 1 58 HIS 58 49 49 HIS HIS A . n A 1 59 THR 59 50 50 THR THR A . n A 1 60 LYS 60 51 51 LYS LYS A . n A 1 61 PHE 61 52 52 PHE PHE A . n A 1 62 ASN 62 53 53 ASN ASN A . n A 1 63 GLY 63 54 54 GLY GLY A . n A 1 64 ARG 64 55 55 ARG ARG A . n A 1 65 PRO 65 56 56 PRO PRO A . n A 1 66 THR 66 57 57 THR THR A . n A 1 67 LYS 67 58 58 LYS LYS A . n A 1 68 ALA 68 59 59 ALA ALA A . n A 1 69 ARG 69 60 60 ARG ARG A . n A 1 70 ALA 70 61 61 ALA ALA A . n A 1 71 LYS 71 62 62 LYS LYS A . n A 1 72 LEU 72 63 63 LEU LEU A . n A 1 73 ALA 73 64 64 ALA ALA A . n A 1 74 PHE 74 65 65 PHE PHE A . n A 1 75 PHE 75 66 66 PHE PHE A . n A 1 76 GLU 76 67 67 GLU GLU A . n A 1 77 LEU 77 68 68 LEU LEU A . n A 1 78 GLY 78 69 69 GLY GLY A . n A 1 79 PRO 79 70 70 PRO PRO A . n A 1 80 LEU 80 71 71 LEU LEU A . n A 1 81 GLN 81 72 72 GLN GLN A . n A 1 82 LEU 82 73 73 LEU LEU A . n A 1 83 GLU 83 74 74 GLU GLU A . n A 1 84 LEU 84 75 75 LEU LEU A . n A 1 85 ILE 85 76 76 ILE ILE A . n A 1 86 GLU 86 77 77 GLU GLU A . n A 1 87 PRO 87 78 78 PRO PRO A . n A 1 88 ASP 88 79 79 ASP ASP A . n A 1 89 GLU 89 80 80 GLU GLU A . n A 1 90 ASN 90 81 81 ASN ASN A . n A 1 91 PRO 91 82 82 PRO PRO A . n A 1 92 SER 92 83 83 SER SER A . n A 1 93 THR 93 84 84 THR THR A . n A 1 94 TRP 94 85 85 TRP TRP A . n A 1 95 ARG 95 86 86 ARG ARG A . n A 1 96 GLU 96 87 87 GLU GLU A . n A 1 97 PHE 97 88 88 PHE PHE A . n A 1 98 LEU 98 89 89 LEU LEU A . n A 1 99 ASP 99 90 90 ASP ASP A . n A 1 100 LYS 100 91 91 LYS LYS A . n A 1 101 ASN 101 92 92 ASN ASN A . n A 1 102 GLY 102 93 93 GLY GLY A . n A 1 103 GLU 103 94 94 GLU GLU A . n A 1 104 GLY 104 95 95 GLY GLY A . n A 1 105 ILE 105 96 96 ILE ILE A . n A 1 106 HIS 106 97 97 HIS HIS A . n A 1 107 HIS 107 98 98 HIS HIS A . n A 1 108 ILE 108 99 99 ILE ILE A . n A 1 109 ALA 109 100 100 ALA ALA A . n A 1 110 PHE 110 101 101 PHE PHE A . n A 1 111 VAL 111 102 102 VAL VAL A . n A 1 112 VAL 112 103 103 VAL VAL A . n A 1 113 LYS 113 104 104 LYS LYS A . n A 1 114 ASP 114 105 105 ASP ASP A . n A 1 115 MET 115 106 106 MET MET A . n A 1 116 ASP 116 107 107 ASP ASP A . n A 1 117 ARG 117 108 108 ARG ARG A . n A 1 118 LYS 118 109 109 LYS LYS A . n A 1 119 VAL 119 110 110 VAL VAL A . n A 1 120 GLU 120 111 111 GLU GLU A . n A 1 121 GLU 121 112 112 GLU GLU A . n A 1 122 LEU 122 113 113 LEU LEU A . n A 1 123 TYR 123 114 114 TYR TYR A . n A 1 124 ARG 124 115 115 ARG ARG A . n A 1 125 LYS 125 116 116 LYS LYS A . n A 1 126 GLY 126 117 117 GLY GLY A . n A 1 127 MET 127 118 118 MET MET A . n A 1 128 LYS 128 119 119 LYS LYS A . n A 1 129 VAL 129 120 120 VAL VAL A . n A 1 130 ILE 130 121 121 ILE ILE A . n A 1 131 GLN 131 122 122 GLN GLN A . n A 1 132 LYS 132 123 123 LYS LYS A . n A 1 133 GLY 133 124 124 GLY GLY A . n A 1 134 ASP 134 125 125 ASP ASP A . n A 1 135 PHE 135 126 126 PHE PHE A . n A 1 136 GLU 136 127 127 GLU GLU A . n A 1 137 GLY 137 128 128 GLY GLY A . n A 1 138 GLY 138 129 129 GLY GLY A . n A 1 139 ARG 139 130 130 ARG ARG A . n A 1 140 TYR 140 131 131 TYR TYR A . n A 1 141 ALA 141 132 132 ALA ALA A . n A 1 142 TYR 142 133 133 TYR TYR A . n A 1 143 ILE 143 134 134 ILE ILE A . n A 1 144 ASP 144 135 135 ASP ASP A . n A 1 145 THR 145 136 136 THR THR A . n A 1 146 LEU 146 137 137 LEU LEU A . n A 1 147 ARG 147 138 138 ARG ARG A . n A 1 148 ALA 148 139 139 ALA ALA A . n A 1 149 LEU 149 140 140 LEU LEU A . n A 1 150 LYS 150 141 141 LYS LYS A . n A 1 151 VAL 151 142 142 VAL VAL A . n A 1 152 MET 152 143 143 MET MET A . n A 1 153 ILE 153 144 144 ILE ILE A . n A 1 154 GLU 154 145 145 GLU GLU A . n A 1 155 LEU 155 146 146 LEU LEU A . n A 1 156 LEU 156 147 147 LEU LEU A . n A 1 157 GLU 157 148 148 GLU GLU A . n A 1 158 ASN 158 149 149 ASN ASN A . n A 1 159 TYR 159 150 150 TYR TYR A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CIT 1 379 379 CIT CIT A . C 3 SO4 1 151 1 SO4 SO4 A . D 3 SO4 1 152 2 SO4 SO4 A . E 4 HOH 1 153 1 HOH HOH A . E 4 HOH 2 154 2 HOH HOH A . E 4 HOH 3 155 3 HOH HOH A . E 4 HOH 4 156 4 HOH HOH A . E 4 HOH 5 157 5 HOH HOH A . E 4 HOH 6 158 6 HOH HOH A . E 4 HOH 7 159 7 HOH HOH A . E 4 HOH 8 160 8 HOH HOH A . E 4 HOH 9 161 9 HOH HOH A . E 4 HOH 10 162 10 HOH HOH A . E 4 HOH 11 163 11 HOH HOH A . E 4 HOH 12 164 12 HOH HOH A . E 4 HOH 13 165 13 HOH HOH A . E 4 HOH 14 166 14 HOH HOH A . E 4 HOH 15 167 15 HOH HOH A . E 4 HOH 16 168 16 HOH HOH A . E 4 HOH 17 169 17 HOH HOH A . E 4 HOH 18 170 18 HOH HOH A . E 4 HOH 19 171 19 HOH HOH A . E 4 HOH 20 172 20 HOH HOH A . E 4 HOH 21 173 21 HOH HOH A . E 4 HOH 22 174 22 HOH HOH A . E 4 HOH 23 175 23 HOH HOH A . E 4 HOH 24 176 24 HOH HOH A . E 4 HOH 25 177 25 HOH HOH A . E 4 HOH 26 178 26 HOH HOH A . E 4 HOH 27 179 27 HOH HOH A . E 4 HOH 28 180 28 HOH HOH A . E 4 HOH 29 181 29 HOH HOH A . E 4 HOH 30 182 30 HOH HOH A . E 4 HOH 31 183 31 HOH HOH A . E 4 HOH 32 184 32 HOH HOH A . E 4 HOH 33 185 33 HOH HOH A . E 4 HOH 34 186 34 HOH HOH A . E 4 HOH 35 187 35 HOH HOH A . E 4 HOH 36 188 36 HOH HOH A . E 4 HOH 37 189 37 HOH HOH A . E 4 HOH 38 190 38 HOH HOH A . E 4 HOH 39 191 39 HOH HOH A . E 4 HOH 40 192 40 HOH HOH A . E 4 HOH 41 193 41 HOH HOH A . E 4 HOH 42 194 42 HOH HOH A . E 4 HOH 43 195 43 HOH HOH A . E 4 HOH 44 196 44 HOH HOH A . E 4 HOH 45 197 45 HOH HOH A . E 4 HOH 46 198 46 HOH HOH A . E 4 HOH 47 199 47 HOH HOH A . E 4 HOH 48 200 48 HOH HOH A . E 4 HOH 49 201 49 HOH HOH A . E 4 HOH 50 202 50 HOH HOH A . E 4 HOH 51 203 51 HOH HOH A . E 4 HOH 52 204 52 HOH HOH A . E 4 HOH 53 205 53 HOH HOH A . E 4 HOH 54 206 54 HOH HOH A . E 4 HOH 55 207 55 HOH HOH A . E 4 HOH 56 208 56 HOH HOH A . E 4 HOH 57 209 57 HOH HOH A . E 4 HOH 58 210 58 HOH HOH A . E 4 HOH 59 211 59 HOH HOH A . E 4 HOH 60 212 60 HOH HOH A . E 4 HOH 61 213 61 HOH HOH A . E 4 HOH 62 214 62 HOH HOH A . E 4 HOH 63 215 63 HOH HOH A . E 4 HOH 64 216 64 HOH HOH A . E 4 HOH 65 217 65 HOH HOH A . E 4 HOH 66 218 66 HOH HOH A . E 4 HOH 67 219 67 HOH HOH A . E 4 HOH 68 220 68 HOH HOH A . E 4 HOH 69 221 69 HOH HOH A . E 4 HOH 70 222 70 HOH HOH A . E 4 HOH 71 223 71 HOH HOH A . E 4 HOH 72 224 72 HOH HOH A . E 4 HOH 73 225 73 HOH HOH A . E 4 HOH 74 226 74 HOH HOH A . E 4 HOH 75 227 75 HOH HOH A . E 4 HOH 76 228 76 HOH HOH A . E 4 HOH 77 229 77 HOH HOH A . E 4 HOH 78 230 78 HOH HOH A . E 4 HOH 79 231 79 HOH HOH A . E 4 HOH 80 232 80 HOH HOH A . E 4 HOH 81 233 81 HOH HOH A . E 4 HOH 82 234 82 HOH HOH A . E 4 HOH 83 235 83 HOH HOH A . E 4 HOH 84 236 84 HOH HOH A . E 4 HOH 85 237 85 HOH HOH A . E 4 HOH 86 238 86 HOH HOH A . E 4 HOH 87 239 87 HOH HOH A . E 4 HOH 88 240 88 HOH HOH A . E 4 HOH 89 241 89 HOH HOH A . E 4 HOH 90 242 90 HOH HOH A . E 4 HOH 91 243 91 HOH HOH A . E 4 HOH 92 244 92 HOH HOH A . E 4 HOH 93 245 93 HOH HOH A . E 4 HOH 94 246 94 HOH HOH A . E 4 HOH 95 247 95 HOH HOH A . E 4 HOH 96 248 96 HOH HOH A . E 4 HOH 97 249 97 HOH HOH A . E 4 HOH 98 250 98 HOH HOH A . E 4 HOH 99 251 99 HOH HOH A . E 4 HOH 100 252 100 HOH HOH A . E 4 HOH 101 253 101 HOH HOH A . E 4 HOH 102 254 102 HOH HOH A . E 4 HOH 103 255 103 HOH HOH A . E 4 HOH 104 256 104 HOH HOH A . E 4 HOH 105 257 105 HOH HOH A . E 4 HOH 106 258 106 HOH HOH A . E 4 HOH 107 259 107 HOH HOH A . E 4 HOH 108 260 108 HOH HOH A . E 4 HOH 109 261 109 HOH HOH A . E 4 HOH 110 262 110 HOH HOH A . E 4 HOH 111 263 111 HOH HOH A . E 4 HOH 112 264 112 HOH HOH A . E 4 HOH 113 265 113 HOH HOH A . E 4 HOH 114 266 114 HOH HOH A . E 4 HOH 115 267 115 HOH HOH A . E 4 HOH 116 268 116 HOH HOH A . E 4 HOH 117 269 117 HOH HOH A . E 4 HOH 118 270 118 HOH HOH A . E 4 HOH 119 271 119 HOH HOH A . E 4 HOH 120 272 120 HOH HOH A . E 4 HOH 121 273 121 HOH HOH A . E 4 HOH 122 274 122 HOH HOH A . E 4 HOH 123 275 123 HOH HOH A . E 4 HOH 124 276 124 HOH HOH A . E 4 HOH 125 277 125 HOH HOH A . E 4 HOH 126 278 126 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language MAR345dtb 'data collection' . ? 1 ? ? ? ? PHENIX 'model building' . ? 2 ? ? ? ? CNS refinement 1.2 ? 3 ? ? ? ? HKL-2000 'data reduction' . ? 4 ? ? ? ? HKL-2000 'data scaling' . ? 5 ? ? ? ? PHENIX phasing . ? 6 ? ? ? ? # _cell.entry_id 3GM5 _cell.length_a 54.022 _cell.length_b 54.022 _cell.length_c 104.798 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3GM5 _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3GM5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.04 _exptl_crystal.density_percent_sol 39.58 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 2.6 _exptl_crystal_grow.pdbx_details '0.1M citric acid, pH 2.6, 1.6M (NH4)2SO4, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR555 FLAT PANEL' _diffrn_detector.pdbx_collection_date 2009-01-18 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'BSRF BEAMLINE 1W2B' _diffrn_source.pdbx_synchrotron_site BSRF _diffrn_source.pdbx_synchrotron_beamline 1W2B _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.000 # _reflns.entry_id 3GM5 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 2.0 _reflns.d_resolution_low 20 _reflns.d_resolution_high 2.0 _reflns.number_obs 11119 _reflns.number_all 11130 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.070 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 37.0 _reflns.B_iso_Wilson_estimate 28 _reflns.pdbx_redundancy 12.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.05 _reflns_shell.percent_possible_all 99.4 _reflns_shell.Rmerge_I_obs 0.245 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 7.6 _reflns_shell.pdbx_redundancy 9.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 696 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3GM5 _refine.ls_number_reflns_obs 10849 _refine.ls_number_reflns_all 10853 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.0 _refine.ls_d_res_high 2.0 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all 0.229 _refine.ls_R_factor_R_work 0.218 _refine.ls_R_factor_R_free 0.247 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 531 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1250 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 23 _refine_hist.number_atoms_solvent 126 _refine_hist.number_atoms_total 1399 _refine_hist.d_res_high 2.0 _refine_hist.d_res_low 8.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_angle_deg 1.61 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d 0.01 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.00 _refine_ls_shell.d_res_low 2.05 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.300 _refine_ls_shell.percent_reflns_obs 99.4 _refine_ls_shell.R_factor_R_free 0.304 _refine_ls_shell.R_factor_R_free_error 0.01 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 34 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 696 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3GM5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3GM5 _struct.title 'Crystal structure of a putative methylmalonyl-coenzyme A epimerase from Thermoanaerobacter tengcongensis at 2.0 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3GM5 _struct_keywords.pdbx_keywords ISOMERASE _struct_keywords.text 'sheet-helix-sheet-sheet-sheet motif, ISOMERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8RCQ6_THETN _struct_ref.pdbx_db_accession Q8RCQ6 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSKNILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPLQLELIEPDE NPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDFEGGRYAYIDTLRALKVMIELLENY ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3GM5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 10 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 159 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8RCQ6 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 150 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 150 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3GM5 MET A 1 ? UNP Q8RCQ6 ? ? 'initiating methionine' -8 1 1 3GM5 SER A 2 ? UNP Q8RCQ6 ? ? 'expression tag' -7 2 1 3GM5 HIS A 3 ? UNP Q8RCQ6 ? ? 'expression tag' -6 3 1 3GM5 HIS A 4 ? UNP Q8RCQ6 ? ? 'expression tag' -5 4 1 3GM5 HIS A 5 ? UNP Q8RCQ6 ? ? 'expression tag' -4 5 1 3GM5 HIS A 6 ? UNP Q8RCQ6 ? ? 'expression tag' -3 6 1 3GM5 HIS A 7 ? UNP Q8RCQ6 ? ? 'expression tag' -2 7 1 3GM5 HIS A 8 ? UNP Q8RCQ6 ? ? 'expression tag' -1 8 1 3GM5 SER A 9 ? UNP Q8RCQ6 ? ? 'expression tag' 0 9 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3980 ? 1 MORE -81 ? 1 'SSA (A^2)' 15280 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_556 y,x,-z+1 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 104.7980000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 16 ? THR A 20 ? ASP A 7 THR A 11 5 ? 5 HELX_P HELX_P2 2 ASP A 29 ? PHE A 41 ? ASP A 20 PHE A 32 1 ? 13 HELX_P HELX_P3 3 ASP A 53 ? HIS A 58 ? ASP A 44 HIS A 49 1 ? 6 HELX_P HELX_P4 4 SER A 92 ? GLY A 102 ? SER A 83 GLY A 93 1 ? 11 HELX_P HELX_P5 5 ASP A 114 ? LYS A 125 ? ASP A 105 LYS A 116 1 ? 12 HELX_P HELX_P6 6 THR A 145 ? LYS A 150 ? THR A 136 LYS A 141 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 10 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 49 ? TRP A 50 ? PHE A 40 TRP A 41 A 2 ALA A 70 ? LEU A 77 ? ALA A 61 LEU A 68 A 3 LEU A 80 ? PRO A 87 ? LEU A 71 PRO A 78 A 4 VAL A 21 ? VAL A 26 ? VAL A 12 VAL A 17 A 5 GLY A 104 ? VAL A 111 ? GLY A 95 VAL A 102 A 6 MET A 152 ? ASN A 158 ? MET A 143 ASN A 149 A 7 GLY A 138 ? ILE A 143 ? GLY A 129 ILE A 134 A 8 VAL A 129 ? PHE A 135 ? VAL A 120 PHE A 126 A 9 LYS A 60 ? PHE A 61 ? LYS A 51 PHE A 52 A 10 ARG A 64 ? PRO A 65 ? ARG A 55 PRO A 56 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 49 ? N PHE A 40 O LEU A 72 ? O LEU A 63 A 2 3 N LEU A 77 ? N LEU A 68 O LEU A 80 ? O LEU A 71 A 3 4 O GLU A 83 ? O GLU A 74 N ILE A 25 ? N ILE A 16 A 4 5 N GLY A 24 ? N GLY A 15 O HIS A 106 ? O HIS A 97 A 5 6 N PHE A 110 ? N PHE A 101 O LEU A 156 ? O LEU A 147 A 6 7 O ILE A 153 ? O ILE A 144 N ILE A 143 ? N ILE A 134 A 7 8 O TYR A 142 ? O TYR A 133 N GLN A 131 ? N GLN A 122 A 8 9 O LYS A 132 ? O LYS A 123 N LYS A 60 ? N LYS A 51 A 9 10 N PHE A 61 ? N PHE A 52 O ARG A 64 ? O ARG A 55 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CIT 379 ? 12 'BINDING SITE FOR RESIDUE CIT A 379' AC2 Software A SO4 151 ? 6 'BINDING SITE FOR RESIDUE SO4 A 151' AC3 Software A SO4 152 ? 8 'BINDING SITE FOR RESIDUE SO4 A 152' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 GLN A 22 ? GLN A 13 . ? 1_555 ? 2 AC1 12 THR A 51 ? THR A 42 . ? 1_555 ? 3 AC1 12 LEU A 72 ? LEU A 63 . ? 1_555 ? 4 AC1 12 GLU A 83 ? GLU A 74 . ? 1_555 ? 5 AC1 12 TRP A 94 ? TRP A 85 . ? 1_555 ? 6 AC1 12 ARG A 124 ? ARG A 115 . ? 4_454 ? 7 AC1 12 TYR A 140 ? TYR A 131 . ? 1_555 ? 8 AC1 12 TYR A 142 ? TYR A 133 . ? 1_555 ? 9 AC1 12 GLU A 154 ? GLU A 145 . ? 1_555 ? 10 AC1 12 LEU A 156 ? LEU A 147 . ? 1_555 ? 11 AC1 12 HOH E . ? HOH A 159 . ? 1_555 ? 12 AC1 12 HOH E . ? HOH A 193 . ? 1_555 ? 13 AC2 6 MET A 17 ? MET A 8 . ? 1_555 ? 14 AC2 6 ARG A 18 ? ARG A 9 . ? 1_555 ? 15 AC2 6 GLU A 39 ? GLU A 30 . ? 6_455 ? 16 AC2 6 ASN A 158 ? ASN A 149 . ? 1_555 ? 17 AC2 6 HOH E . ? HOH A 198 . ? 1_555 ? 18 AC2 6 HOH E . ? HOH A 257 . ? 1_555 ? 19 AC3 8 ARG A 28 ? ARG A 19 . ? 1_555 ? 20 AC3 8 LYS A 60 ? LYS A 51 . ? 6_565 ? 21 AC3 8 GLU A 89 ? GLU A 80 . ? 1_555 ? 22 AC3 8 ARG A 95 ? ARG A 86 . ? 1_555 ? 23 AC3 8 LEU A 98 ? LEU A 89 . ? 1_555 ? 24 AC3 8 HOH E . ? HOH A 227 . ? 1_555 ? 25 AC3 8 HOH E . ? HOH A 250 . ? 6_565 ? 26 AC3 8 HOH E . ? HOH A 254 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 7 ? ? CG A ASP 7 ? ? OD1 A ASP 7 ? ? 124.64 118.30 6.34 0.90 N 2 1 CB A ASP 7 ? ? CG A ASP 7 ? ? OD2 A ASP 7 ? ? 108.34 118.30 -9.96 0.90 N 3 1 CA A LEU 25 ? ? CB A LEU 25 ? ? CG A LEU 25 ? ? 130.52 115.30 15.22 2.30 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id MET _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 1 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 63.69 _pdbx_validate_torsion.psi -15.60 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -8 ? A MET 1 2 1 Y 1 A SER -7 ? A SER 2 3 1 Y 1 A HIS -6 ? A HIS 3 4 1 Y 1 A HIS -5 ? A HIS 4 5 1 Y 1 A HIS -4 ? A HIS 5 6 1 Y 1 A HIS -3 ? A HIS 6 7 1 Y 1 A HIS -2 ? A HIS 7 8 1 Y 1 A HIS -1 ? A HIS 8 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CIT C1 C N N 74 CIT O1 O N N 75 CIT O2 O N N 76 CIT C2 C N N 77 CIT C3 C N N 78 CIT O7 O N N 79 CIT C4 C N N 80 CIT C5 C N N 81 CIT O3 O N N 82 CIT O4 O N N 83 CIT C6 C N N 84 CIT O5 O N N 85 CIT O6 O N N 86 CIT HO2 H N N 87 CIT H21 H N N 88 CIT H22 H N N 89 CIT HO7 H N N 90 CIT H41 H N N 91 CIT H42 H N N 92 CIT HO4 H N N 93 CIT HO6 H N N 94 GLN N N N N 95 GLN CA C N S 96 GLN C C N N 97 GLN O O N N 98 GLN CB C N N 99 GLN CG C N N 100 GLN CD C N N 101 GLN OE1 O N N 102 GLN NE2 N N N 103 GLN OXT O N N 104 GLN H H N N 105 GLN H2 H N N 106 GLN HA H N N 107 GLN HB2 H N N 108 GLN HB3 H N N 109 GLN HG2 H N N 110 GLN HG3 H N N 111 GLN HE21 H N N 112 GLN HE22 H N N 113 GLN HXT H N N 114 GLU N N N N 115 GLU CA C N S 116 GLU C C N N 117 GLU O O N N 118 GLU CB C N N 119 GLU CG C N N 120 GLU CD C N N 121 GLU OE1 O N N 122 GLU OE2 O N N 123 GLU OXT O N N 124 GLU H H N N 125 GLU H2 H N N 126 GLU HA H N N 127 GLU HB2 H N N 128 GLU HB3 H N N 129 GLU HG2 H N N 130 GLU HG3 H N N 131 GLU HE2 H N N 132 GLU HXT H N N 133 GLY N N N N 134 GLY CA C N N 135 GLY C C N N 136 GLY O O N N 137 GLY OXT O N N 138 GLY H H N N 139 GLY H2 H N N 140 GLY HA2 H N N 141 GLY HA3 H N N 142 GLY HXT H N N 143 HIS N N N N 144 HIS CA C N S 145 HIS C C N N 146 HIS O O N N 147 HIS CB C N N 148 HIS CG C Y N 149 HIS ND1 N Y N 150 HIS CD2 C Y N 151 HIS CE1 C Y N 152 HIS NE2 N Y N 153 HIS OXT O N N 154 HIS H H N N 155 HIS H2 H N N 156 HIS HA H N N 157 HIS HB2 H N N 158 HIS HB3 H N N 159 HIS HD1 H N N 160 HIS HD2 H N N 161 HIS HE1 H N N 162 HIS HE2 H N N 163 HIS HXT H N N 164 HOH O O N N 165 HOH H1 H N N 166 HOH H2 H N N 167 ILE N N N N 168 ILE CA C N S 169 ILE C C N N 170 ILE O O N N 171 ILE CB C N S 172 ILE CG1 C N N 173 ILE CG2 C N N 174 ILE CD1 C N N 175 ILE OXT O N N 176 ILE H H N N 177 ILE H2 H N N 178 ILE HA H N N 179 ILE HB H N N 180 ILE HG12 H N N 181 ILE HG13 H N N 182 ILE HG21 H N N 183 ILE HG22 H N N 184 ILE HG23 H N N 185 ILE HD11 H N N 186 ILE HD12 H N N 187 ILE HD13 H N N 188 ILE HXT H N N 189 LEU N N N N 190 LEU CA C N S 191 LEU C C N N 192 LEU O O N N 193 LEU CB C N N 194 LEU CG C N N 195 LEU CD1 C N N 196 LEU CD2 C N N 197 LEU OXT O N N 198 LEU H H N N 199 LEU H2 H N N 200 LEU HA H N N 201 LEU HB2 H N N 202 LEU HB3 H N N 203 LEU HG H N N 204 LEU HD11 H N N 205 LEU HD12 H N N 206 LEU HD13 H N N 207 LEU HD21 H N N 208 LEU HD22 H N N 209 LEU HD23 H N N 210 LEU HXT H N N 211 LYS N N N N 212 LYS CA C N S 213 LYS C C N N 214 LYS O O N N 215 LYS CB C N N 216 LYS CG C N N 217 LYS CD C N N 218 LYS CE C N N 219 LYS NZ N N N 220 LYS OXT O N N 221 LYS H H N N 222 LYS H2 H N N 223 LYS HA H N N 224 LYS HB2 H N N 225 LYS HB3 H N N 226 LYS HG2 H N N 227 LYS HG3 H N N 228 LYS HD2 H N N 229 LYS HD3 H N N 230 LYS HE2 H N N 231 LYS HE3 H N N 232 LYS HZ1 H N N 233 LYS HZ2 H N N 234 LYS HZ3 H N N 235 LYS HXT H N N 236 MET N N N N 237 MET CA C N S 238 MET C C N N 239 MET O O N N 240 MET CB C N N 241 MET CG C N N 242 MET SD S N N 243 MET CE C N N 244 MET OXT O N N 245 MET H H N N 246 MET H2 H N N 247 MET HA H N N 248 MET HB2 H N N 249 MET HB3 H N N 250 MET HG2 H N N 251 MET HG3 H N N 252 MET HE1 H N N 253 MET HE2 H N N 254 MET HE3 H N N 255 MET HXT H N N 256 PHE N N N N 257 PHE CA C N S 258 PHE C C N N 259 PHE O O N N 260 PHE CB C N N 261 PHE CG C Y N 262 PHE CD1 C Y N 263 PHE CD2 C Y N 264 PHE CE1 C Y N 265 PHE CE2 C Y N 266 PHE CZ C Y N 267 PHE OXT O N N 268 PHE H H N N 269 PHE H2 H N N 270 PHE HA H N N 271 PHE HB2 H N N 272 PHE HB3 H N N 273 PHE HD1 H N N 274 PHE HD2 H N N 275 PHE HE1 H N N 276 PHE HE2 H N N 277 PHE HZ H N N 278 PHE HXT H N N 279 PRO N N N N 280 PRO CA C N S 281 PRO C C N N 282 PRO O O N N 283 PRO CB C N N 284 PRO CG C N N 285 PRO CD C N N 286 PRO OXT O N N 287 PRO H H N N 288 PRO HA H N N 289 PRO HB2 H N N 290 PRO HB3 H N N 291 PRO HG2 H N N 292 PRO HG3 H N N 293 PRO HD2 H N N 294 PRO HD3 H N N 295 PRO HXT H N N 296 SER N N N N 297 SER CA C N S 298 SER C C N N 299 SER O O N N 300 SER CB C N N 301 SER OG O N N 302 SER OXT O N N 303 SER H H N N 304 SER H2 H N N 305 SER HA H N N 306 SER HB2 H N N 307 SER HB3 H N N 308 SER HG H N N 309 SER HXT H N N 310 SO4 S S N N 311 SO4 O1 O N N 312 SO4 O2 O N N 313 SO4 O3 O N N 314 SO4 O4 O N N 315 THR N N N N 316 THR CA C N S 317 THR C C N N 318 THR O O N N 319 THR CB C N R 320 THR OG1 O N N 321 THR CG2 C N N 322 THR OXT O N N 323 THR H H N N 324 THR H2 H N N 325 THR HA H N N 326 THR HB H N N 327 THR HG1 H N N 328 THR HG21 H N N 329 THR HG22 H N N 330 THR HG23 H N N 331 THR HXT H N N 332 TRP N N N N 333 TRP CA C N S 334 TRP C C N N 335 TRP O O N N 336 TRP CB C N N 337 TRP CG C Y N 338 TRP CD1 C Y N 339 TRP CD2 C Y N 340 TRP NE1 N Y N 341 TRP CE2 C Y N 342 TRP CE3 C Y N 343 TRP CZ2 C Y N 344 TRP CZ3 C Y N 345 TRP CH2 C Y N 346 TRP OXT O N N 347 TRP H H N N 348 TRP H2 H N N 349 TRP HA H N N 350 TRP HB2 H N N 351 TRP HB3 H N N 352 TRP HD1 H N N 353 TRP HE1 H N N 354 TRP HE3 H N N 355 TRP HZ2 H N N 356 TRP HZ3 H N N 357 TRP HH2 H N N 358 TRP HXT H N N 359 TYR N N N N 360 TYR CA C N S 361 TYR C C N N 362 TYR O O N N 363 TYR CB C N N 364 TYR CG C Y N 365 TYR CD1 C Y N 366 TYR CD2 C Y N 367 TYR CE1 C Y N 368 TYR CE2 C Y N 369 TYR CZ C Y N 370 TYR OH O N N 371 TYR OXT O N N 372 TYR H H N N 373 TYR H2 H N N 374 TYR HA H N N 375 TYR HB2 H N N 376 TYR HB3 H N N 377 TYR HD1 H N N 378 TYR HD2 H N N 379 TYR HE1 H N N 380 TYR HE2 H N N 381 TYR HH H N N 382 TYR HXT H N N 383 VAL N N N N 384 VAL CA C N S 385 VAL C C N N 386 VAL O O N N 387 VAL CB C N N 388 VAL CG1 C N N 389 VAL CG2 C N N 390 VAL OXT O N N 391 VAL H H N N 392 VAL H2 H N N 393 VAL HA H N N 394 VAL HB H N N 395 VAL HG11 H N N 396 VAL HG12 H N N 397 VAL HG13 H N N 398 VAL HG21 H N N 399 VAL HG22 H N N 400 VAL HG23 H N N 401 VAL HXT H N N 402 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CIT C1 O1 doub N N 70 CIT C1 O2 sing N N 71 CIT C1 C2 sing N N 72 CIT O2 HO2 sing N N 73 CIT C2 C3 sing N N 74 CIT C2 H21 sing N N 75 CIT C2 H22 sing N N 76 CIT C3 O7 sing N N 77 CIT C3 C4 sing N N 78 CIT C3 C6 sing N N 79 CIT O7 HO7 sing N N 80 CIT C4 C5 sing N N 81 CIT C4 H41 sing N N 82 CIT C4 H42 sing N N 83 CIT C5 O3 doub N N 84 CIT C5 O4 sing N N 85 CIT O4 HO4 sing N N 86 CIT C6 O5 doub N N 87 CIT C6 O6 sing N N 88 CIT O6 HO6 sing N N 89 GLN N CA sing N N 90 GLN N H sing N N 91 GLN N H2 sing N N 92 GLN CA C sing N N 93 GLN CA CB sing N N 94 GLN CA HA sing N N 95 GLN C O doub N N 96 GLN C OXT sing N N 97 GLN CB CG sing N N 98 GLN CB HB2 sing N N 99 GLN CB HB3 sing N N 100 GLN CG CD sing N N 101 GLN CG HG2 sing N N 102 GLN CG HG3 sing N N 103 GLN CD OE1 doub N N 104 GLN CD NE2 sing N N 105 GLN NE2 HE21 sing N N 106 GLN NE2 HE22 sing N N 107 GLN OXT HXT sing N N 108 GLU N CA sing N N 109 GLU N H sing N N 110 GLU N H2 sing N N 111 GLU CA C sing N N 112 GLU CA CB sing N N 113 GLU CA HA sing N N 114 GLU C O doub N N 115 GLU C OXT sing N N 116 GLU CB CG sing N N 117 GLU CB HB2 sing N N 118 GLU CB HB3 sing N N 119 GLU CG CD sing N N 120 GLU CG HG2 sing N N 121 GLU CG HG3 sing N N 122 GLU CD OE1 doub N N 123 GLU CD OE2 sing N N 124 GLU OE2 HE2 sing N N 125 GLU OXT HXT sing N N 126 GLY N CA sing N N 127 GLY N H sing N N 128 GLY N H2 sing N N 129 GLY CA C sing N N 130 GLY CA HA2 sing N N 131 GLY CA HA3 sing N N 132 GLY C O doub N N 133 GLY C OXT sing N N 134 GLY OXT HXT sing N N 135 HIS N CA sing N N 136 HIS N H sing N N 137 HIS N H2 sing N N 138 HIS CA C sing N N 139 HIS CA CB sing N N 140 HIS CA HA sing N N 141 HIS C O doub N N 142 HIS C OXT sing N N 143 HIS CB CG sing N N 144 HIS CB HB2 sing N N 145 HIS CB HB3 sing N N 146 HIS CG ND1 sing Y N 147 HIS CG CD2 doub Y N 148 HIS ND1 CE1 doub Y N 149 HIS ND1 HD1 sing N N 150 HIS CD2 NE2 sing Y N 151 HIS CD2 HD2 sing N N 152 HIS CE1 NE2 sing Y N 153 HIS CE1 HE1 sing N N 154 HIS NE2 HE2 sing N N 155 HIS OXT HXT sing N N 156 HOH O H1 sing N N 157 HOH O H2 sing N N 158 ILE N CA sing N N 159 ILE N H sing N N 160 ILE N H2 sing N N 161 ILE CA C sing N N 162 ILE CA CB sing N N 163 ILE CA HA sing N N 164 ILE C O doub N N 165 ILE C OXT sing N N 166 ILE CB CG1 sing N N 167 ILE CB CG2 sing N N 168 ILE CB HB sing N N 169 ILE CG1 CD1 sing N N 170 ILE CG1 HG12 sing N N 171 ILE CG1 HG13 sing N N 172 ILE CG2 HG21 sing N N 173 ILE CG2 HG22 sing N N 174 ILE CG2 HG23 sing N N 175 ILE CD1 HD11 sing N N 176 ILE CD1 HD12 sing N N 177 ILE CD1 HD13 sing N N 178 ILE OXT HXT sing N N 179 LEU N CA sing N N 180 LEU N H sing N N 181 LEU N H2 sing N N 182 LEU CA C sing N N 183 LEU CA CB sing N N 184 LEU CA HA sing N N 185 LEU C O doub N N 186 LEU C OXT sing N N 187 LEU CB CG sing N N 188 LEU CB HB2 sing N N 189 LEU CB HB3 sing N N 190 LEU CG CD1 sing N N 191 LEU CG CD2 sing N N 192 LEU CG HG sing N N 193 LEU CD1 HD11 sing N N 194 LEU CD1 HD12 sing N N 195 LEU CD1 HD13 sing N N 196 LEU CD2 HD21 sing N N 197 LEU CD2 HD22 sing N N 198 LEU CD2 HD23 sing N N 199 LEU OXT HXT sing N N 200 LYS N CA sing N N 201 LYS N H sing N N 202 LYS N H2 sing N N 203 LYS CA C sing N N 204 LYS CA CB sing N N 205 LYS CA HA sing N N 206 LYS C O doub N N 207 LYS C OXT sing N N 208 LYS CB CG sing N N 209 LYS CB HB2 sing N N 210 LYS CB HB3 sing N N 211 LYS CG CD sing N N 212 LYS CG HG2 sing N N 213 LYS CG HG3 sing N N 214 LYS CD CE sing N N 215 LYS CD HD2 sing N N 216 LYS CD HD3 sing N N 217 LYS CE NZ sing N N 218 LYS CE HE2 sing N N 219 LYS CE HE3 sing N N 220 LYS NZ HZ1 sing N N 221 LYS NZ HZ2 sing N N 222 LYS NZ HZ3 sing N N 223 LYS OXT HXT sing N N 224 MET N CA sing N N 225 MET N H sing N N 226 MET N H2 sing N N 227 MET CA C sing N N 228 MET CA CB sing N N 229 MET CA HA sing N N 230 MET C O doub N N 231 MET C OXT sing N N 232 MET CB CG sing N N 233 MET CB HB2 sing N N 234 MET CB HB3 sing N N 235 MET CG SD sing N N 236 MET CG HG2 sing N N 237 MET CG HG3 sing N N 238 MET SD CE sing N N 239 MET CE HE1 sing N N 240 MET CE HE2 sing N N 241 MET CE HE3 sing N N 242 MET OXT HXT sing N N 243 PHE N CA sing N N 244 PHE N H sing N N 245 PHE N H2 sing N N 246 PHE CA C sing N N 247 PHE CA CB sing N N 248 PHE CA HA sing N N 249 PHE C O doub N N 250 PHE C OXT sing N N 251 PHE CB CG sing N N 252 PHE CB HB2 sing N N 253 PHE CB HB3 sing N N 254 PHE CG CD1 doub Y N 255 PHE CG CD2 sing Y N 256 PHE CD1 CE1 sing Y N 257 PHE CD1 HD1 sing N N 258 PHE CD2 CE2 doub Y N 259 PHE CD2 HD2 sing N N 260 PHE CE1 CZ doub Y N 261 PHE CE1 HE1 sing N N 262 PHE CE2 CZ sing Y N 263 PHE CE2 HE2 sing N N 264 PHE CZ HZ sing N N 265 PHE OXT HXT sing N N 266 PRO N CA sing N N 267 PRO N CD sing N N 268 PRO N H sing N N 269 PRO CA C sing N N 270 PRO CA CB sing N N 271 PRO CA HA sing N N 272 PRO C O doub N N 273 PRO C OXT sing N N 274 PRO CB CG sing N N 275 PRO CB HB2 sing N N 276 PRO CB HB3 sing N N 277 PRO CG CD sing N N 278 PRO CG HG2 sing N N 279 PRO CG HG3 sing N N 280 PRO CD HD2 sing N N 281 PRO CD HD3 sing N N 282 PRO OXT HXT sing N N 283 SER N CA sing N N 284 SER N H sing N N 285 SER N H2 sing N N 286 SER CA C sing N N 287 SER CA CB sing N N 288 SER CA HA sing N N 289 SER C O doub N N 290 SER C OXT sing N N 291 SER CB OG sing N N 292 SER CB HB2 sing N N 293 SER CB HB3 sing N N 294 SER OG HG sing N N 295 SER OXT HXT sing N N 296 SO4 S O1 doub N N 297 SO4 S O2 doub N N 298 SO4 S O3 sing N N 299 SO4 S O4 sing N N 300 THR N CA sing N N 301 THR N H sing N N 302 THR N H2 sing N N 303 THR CA C sing N N 304 THR CA CB sing N N 305 THR CA HA sing N N 306 THR C O doub N N 307 THR C OXT sing N N 308 THR CB OG1 sing N N 309 THR CB CG2 sing N N 310 THR CB HB sing N N 311 THR OG1 HG1 sing N N 312 THR CG2 HG21 sing N N 313 THR CG2 HG22 sing N N 314 THR CG2 HG23 sing N N 315 THR OXT HXT sing N N 316 TRP N CA sing N N 317 TRP N H sing N N 318 TRP N H2 sing N N 319 TRP CA C sing N N 320 TRP CA CB sing N N 321 TRP CA HA sing N N 322 TRP C O doub N N 323 TRP C OXT sing N N 324 TRP CB CG sing N N 325 TRP CB HB2 sing N N 326 TRP CB HB3 sing N N 327 TRP CG CD1 doub Y N 328 TRP CG CD2 sing Y N 329 TRP CD1 NE1 sing Y N 330 TRP CD1 HD1 sing N N 331 TRP CD2 CE2 doub Y N 332 TRP CD2 CE3 sing Y N 333 TRP NE1 CE2 sing Y N 334 TRP NE1 HE1 sing N N 335 TRP CE2 CZ2 sing Y N 336 TRP CE3 CZ3 doub Y N 337 TRP CE3 HE3 sing N N 338 TRP CZ2 CH2 doub Y N 339 TRP CZ2 HZ2 sing N N 340 TRP CZ3 CH2 sing Y N 341 TRP CZ3 HZ3 sing N N 342 TRP CH2 HH2 sing N N 343 TRP OXT HXT sing N N 344 TYR N CA sing N N 345 TYR N H sing N N 346 TYR N H2 sing N N 347 TYR CA C sing N N 348 TYR CA CB sing N N 349 TYR CA HA sing N N 350 TYR C O doub N N 351 TYR C OXT sing N N 352 TYR CB CG sing N N 353 TYR CB HB2 sing N N 354 TYR CB HB3 sing N N 355 TYR CG CD1 doub Y N 356 TYR CG CD2 sing Y N 357 TYR CD1 CE1 sing Y N 358 TYR CD1 HD1 sing N N 359 TYR CD2 CE2 doub Y N 360 TYR CD2 HD2 sing N N 361 TYR CE1 CZ doub Y N 362 TYR CE1 HE1 sing N N 363 TYR CE2 CZ sing Y N 364 TYR CE2 HE2 sing N N 365 TYR CZ OH sing N N 366 TYR OH HH sing N N 367 TYR OXT HXT sing N N 368 VAL N CA sing N N 369 VAL N H sing N N 370 VAL N H2 sing N N 371 VAL CA C sing N N 372 VAL CA CB sing N N 373 VAL CA HA sing N N 374 VAL C O doub N N 375 VAL C OXT sing N N 376 VAL CB CG1 sing N N 377 VAL CB CG2 sing N N 378 VAL CB HB sing N N 379 VAL CG1 HG11 sing N N 380 VAL CG1 HG12 sing N N 381 VAL CG1 HG13 sing N N 382 VAL CG2 HG21 sing N N 383 VAL CG2 HG22 sing N N 384 VAL CG2 HG23 sing N N 385 VAL OXT HXT sing N N 386 # _atom_sites.entry_id 3GM5 _atom_sites.fract_transf_matrix[1][1] 0.018511 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018511 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009542 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_