data_3GML # _entry.id 3GML # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3GML pdb_00003gml 10.2210/pdb3gml/pdb RCSB RCSB052048 ? ? WWPDB D_1000052048 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1Z5L 'same protein bound to alpha-galactosyl ceramide' unspecified PDB 2AKR 'same protein bound to sulfatide' unspecified PDB 2FIK 'same protein bound to microbial alpha-galacturonosyl ceramide' unspecified PDB 2Q7Y 'same protein bound to mCD1d' unspecified PDB 3GMR 'same protein bound to C8Ph, different space group' unspecified PDB 3GMM 'same protein in complex with C8Ph' unspecified PDB 3GMN 'same protein in complex with C10Ph' unspecified PDB 3GMO 'same protein in complex with C8PhF' unspecified PDB 3GMP 'same protein in complex with PBS-25' unspecified PDB 3GMQ 'same protein no ligand added' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3GML _pdbx_database_status.recvd_initial_deposition_date 2009-03-14 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Schiefner, A.' 1 'Wilson, I.A.' 2 # _citation.id primary _citation.title 'Structural evaluation of potent NKT cell agonists: implications for design of novel stimulatory ligands.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 394 _citation.page_first 71 _citation.page_last 82 _citation.year 2009 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19732779 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2009.08.061 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Schiefner, A.' 1 ? primary 'Fujio, M.' 2 ? primary 'Wu, D.' 3 ? primary 'Wong, C.H.' 4 ? primary 'Wilson, I.A.' 5 ? # _cell.entry_id 3GML _cell.length_a 41.660 _cell.length_b 97.630 _cell.length_c 55.270 _cell.angle_alpha 90.00 _cell.angle_beta 106.50 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3GML _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'T-cell surface glycoprotein CD1d1' 32776.797 1 ? ? 'UNP residues 19-297' ? 2 polymer man 'Beta-2 microglobulin' 11660.350 1 ? ? 'UNP residues 21-119' ? 3 branched man ;alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 910.823 1 ? ? ? ? 4 branched man ;alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose ; 1056.964 1 ? ? ? ? 5 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 6 non-polymer syn 'N-{(1S,2S,3R)-1-[(alpha-D-galactopyranosyloxy)methyl]-2,3-dihydroxyheptadecyl}-6-phenylhexanamide' 653.887 1 ? ? ? ? 7 non-polymer syn 'PALMITIC ACID' 256.424 1 ? ? ? ? 8 non-polymer syn 1,2-ETHANEDIOL 62.068 4 ? ? ? ? 9 water nat water 18.015 326 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;SEAQQKNYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKLQHMFQVYRVSFTRD IQELVKMMSPKEDYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGTSATV QMLLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPSSAHGHRQLVCHVSGFYPKPVWVMWMRGDQEQQGTHRGDFLPN ADETWYLQATLDVEAGEEAGLACRVKHSSLGGQDIILYWGSHHHHHH ; ;SEAQQKNYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKLQHMFQVYRVSFTRD IQELVKMMSPKEDYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGTSATV QMLLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPSSAHGHRQLVCHVSGFYPKPVWVMWMRGDQEQQGTHRGDFLPN ADETWYLQATLDVEAGEEAGLACRVKHSSLGGQDIILYWGSHHHHHH ; A ? 2 'polypeptide(L)' no no ;IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYAC RVKHASMAEPKTVYWDRDM ; ;IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYAC RVKHASMAEPKTVYWDRDM ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLU n 1 3 ALA n 1 4 GLN n 1 5 GLN n 1 6 LYS n 1 7 ASN n 1 8 TYR n 1 9 THR n 1 10 PHE n 1 11 ARG n 1 12 CYS n 1 13 LEU n 1 14 GLN n 1 15 MET n 1 16 SER n 1 17 SER n 1 18 PHE n 1 19 ALA n 1 20 ASN n 1 21 ARG n 1 22 SER n 1 23 TRP n 1 24 SER n 1 25 ARG n 1 26 THR n 1 27 ASP n 1 28 SER n 1 29 VAL n 1 30 VAL n 1 31 TRP n 1 32 LEU n 1 33 GLY n 1 34 ASP n 1 35 LEU n 1 36 GLN n 1 37 THR n 1 38 HIS n 1 39 ARG n 1 40 TRP n 1 41 SER n 1 42 ASN n 1 43 ASP n 1 44 SER n 1 45 ALA n 1 46 THR n 1 47 ILE n 1 48 SER n 1 49 PHE n 1 50 THR n 1 51 LYS n 1 52 PRO n 1 53 TRP n 1 54 SER n 1 55 GLN n 1 56 GLY n 1 57 LYS n 1 58 LEU n 1 59 SER n 1 60 ASN n 1 61 GLN n 1 62 GLN n 1 63 TRP n 1 64 GLU n 1 65 LYS n 1 66 LEU n 1 67 GLN n 1 68 HIS n 1 69 MET n 1 70 PHE n 1 71 GLN n 1 72 VAL n 1 73 TYR n 1 74 ARG n 1 75 VAL n 1 76 SER n 1 77 PHE n 1 78 THR n 1 79 ARG n 1 80 ASP n 1 81 ILE n 1 82 GLN n 1 83 GLU n 1 84 LEU n 1 85 VAL n 1 86 LYS n 1 87 MET n 1 88 MET n 1 89 SER n 1 90 PRO n 1 91 LYS n 1 92 GLU n 1 93 ASP n 1 94 TYR n 1 95 PRO n 1 96 ILE n 1 97 GLU n 1 98 ILE n 1 99 GLN n 1 100 LEU n 1 101 SER n 1 102 ALA n 1 103 GLY n 1 104 CYS n 1 105 GLU n 1 106 MET n 1 107 TYR n 1 108 PRO n 1 109 GLY n 1 110 ASN n 1 111 ALA n 1 112 SER n 1 113 GLU n 1 114 SER n 1 115 PHE n 1 116 LEU n 1 117 HIS n 1 118 VAL n 1 119 ALA n 1 120 PHE n 1 121 GLN n 1 122 GLY n 1 123 LYS n 1 124 TYR n 1 125 VAL n 1 126 VAL n 1 127 ARG n 1 128 PHE n 1 129 TRP n 1 130 GLY n 1 131 THR n 1 132 SER n 1 133 TRP n 1 134 GLN n 1 135 THR n 1 136 VAL n 1 137 PRO n 1 138 GLY n 1 139 ALA n 1 140 PRO n 1 141 SER n 1 142 TRP n 1 143 LEU n 1 144 ASP n 1 145 LEU n 1 146 PRO n 1 147 ILE n 1 148 LYS n 1 149 VAL n 1 150 LEU n 1 151 ASN n 1 152 ALA n 1 153 ASP n 1 154 GLN n 1 155 GLY n 1 156 THR n 1 157 SER n 1 158 ALA n 1 159 THR n 1 160 VAL n 1 161 GLN n 1 162 MET n 1 163 LEU n 1 164 LEU n 1 165 ASN n 1 166 ASP n 1 167 THR n 1 168 CYS n 1 169 PRO n 1 170 LEU n 1 171 PHE n 1 172 VAL n 1 173 ARG n 1 174 GLY n 1 175 LEU n 1 176 LEU n 1 177 GLU n 1 178 ALA n 1 179 GLY n 1 180 LYS n 1 181 SER n 1 182 ASP n 1 183 LEU n 1 184 GLU n 1 185 LYS n 1 186 GLN n 1 187 GLU n 1 188 LYS n 1 189 PRO n 1 190 VAL n 1 191 ALA n 1 192 TRP n 1 193 LEU n 1 194 SER n 1 195 SER n 1 196 VAL n 1 197 PRO n 1 198 SER n 1 199 SER n 1 200 ALA n 1 201 HIS n 1 202 GLY n 1 203 HIS n 1 204 ARG n 1 205 GLN n 1 206 LEU n 1 207 VAL n 1 208 CYS n 1 209 HIS n 1 210 VAL n 1 211 SER n 1 212 GLY n 1 213 PHE n 1 214 TYR n 1 215 PRO n 1 216 LYS n 1 217 PRO n 1 218 VAL n 1 219 TRP n 1 220 VAL n 1 221 MET n 1 222 TRP n 1 223 MET n 1 224 ARG n 1 225 GLY n 1 226 ASP n 1 227 GLN n 1 228 GLU n 1 229 GLN n 1 230 GLN n 1 231 GLY n 1 232 THR n 1 233 HIS n 1 234 ARG n 1 235 GLY n 1 236 ASP n 1 237 PHE n 1 238 LEU n 1 239 PRO n 1 240 ASN n 1 241 ALA n 1 242 ASP n 1 243 GLU n 1 244 THR n 1 245 TRP n 1 246 TYR n 1 247 LEU n 1 248 GLN n 1 249 ALA n 1 250 THR n 1 251 LEU n 1 252 ASP n 1 253 VAL n 1 254 GLU n 1 255 ALA n 1 256 GLY n 1 257 GLU n 1 258 GLU n 1 259 ALA n 1 260 GLY n 1 261 LEU n 1 262 ALA n 1 263 CYS n 1 264 ARG n 1 265 VAL n 1 266 LYS n 1 267 HIS n 1 268 SER n 1 269 SER n 1 270 LEU n 1 271 GLY n 1 272 GLY n 1 273 GLN n 1 274 ASP n 1 275 ILE n 1 276 ILE n 1 277 LEU n 1 278 TYR n 1 279 TRP n 1 280 GLY n 1 281 SER n 1 282 HIS n 1 283 HIS n 1 284 HIS n 1 285 HIS n 1 286 HIS n 1 287 HIS n 2 1 ILE n 2 2 GLN n 2 3 LYS n 2 4 THR n 2 5 PRO n 2 6 GLN n 2 7 ILE n 2 8 GLN n 2 9 VAL n 2 10 TYR n 2 11 SER n 2 12 ARG n 2 13 HIS n 2 14 PRO n 2 15 PRO n 2 16 GLU n 2 17 ASN n 2 18 GLY n 2 19 LYS n 2 20 PRO n 2 21 ASN n 2 22 ILE n 2 23 LEU n 2 24 ASN n 2 25 CYS n 2 26 TYR n 2 27 VAL n 2 28 THR n 2 29 GLN n 2 30 PHE n 2 31 HIS n 2 32 PRO n 2 33 PRO n 2 34 HIS n 2 35 ILE n 2 36 GLU n 2 37 ILE n 2 38 GLN n 2 39 MET n 2 40 LEU n 2 41 LYS n 2 42 ASN n 2 43 GLY n 2 44 LYS n 2 45 LYS n 2 46 ILE n 2 47 PRO n 2 48 LYS n 2 49 VAL n 2 50 GLU n 2 51 MET n 2 52 SER n 2 53 ASP n 2 54 MET n 2 55 SER n 2 56 PHE n 2 57 SER n 2 58 LYS n 2 59 ASP n 2 60 TRP n 2 61 SER n 2 62 PHE n 2 63 TYR n 2 64 ILE n 2 65 LEU n 2 66 ALA n 2 67 HIS n 2 68 THR n 2 69 GLU n 2 70 PHE n 2 71 THR n 2 72 PRO n 2 73 THR n 2 74 GLU n 2 75 THR n 2 76 ASP n 2 77 THR n 2 78 TYR n 2 79 ALA n 2 80 CYS n 2 81 ARG n 2 82 VAL n 2 83 LYS n 2 84 HIS n 2 85 ALA n 2 86 SER n 2 87 MET n 2 88 ALA n 2 89 GLU n 2 90 PRO n 2 91 LYS n 2 92 THR n 2 93 VAL n 2 94 TYR n 2 95 TRP n 2 96 ASP n 2 97 ARG n 2 98 ASP n 2 99 MET n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? mouse ? 'Cd1d1, Cd1.1' ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? SF9 ? ? ? ? ? ? ? Baculovirus ? ? ? pAcUW51 ? ? 2 1 sample ? ? ? mouse ? B2m ? ? ? ? ? ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? SF9 ? ? ? ? ? ? ? Baculovirus ? ? ? pAcUW51 ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP CD1D1_MOUSE P11609 1 ;SEAQQKNYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQGKLSNQQWEKLQHMFQVYRVSFTRD IQELVKMMSPKEDYPIEIQLSAGCEMYPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGTSATV QMLLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPSSADGHRQLVCHVSGFYPKPVWVMWMRGDQEQQGTHRGDFLPN ADETWYLQATLDVEAGEEAGLACRVKHSSLGGQDIILYW ; 19 ? 2 UNP Q91XJ8_MOUSE Q91XJ8 2 ;IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYAC RVKHASMAEPKTVYWDRDM ; 21 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3GML A 1 ? 279 ? P11609 19 ? 297 ? 1 279 2 2 3GML B 1 ? 99 ? Q91XJ8 21 ? 119 ? 1 99 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3GML HIS A 201 ? UNP P11609 ASP 219 'SEE REMARK 999' 201 1 1 3GML GLY A 280 ? UNP P11609 ? ? 'expression tag' 280 2 1 3GML SER A 281 ? UNP P11609 ? ? 'expression tag' 281 3 1 3GML HIS A 282 ? UNP P11609 ? ? 'expression tag' 282 4 1 3GML HIS A 283 ? UNP P11609 ? ? 'expression tag' 283 5 1 3GML HIS A 284 ? UNP P11609 ? ? 'expression tag' 284 6 1 3GML HIS A 285 ? UNP P11609 ? ? 'expression tag' 285 7 1 3GML HIS A 286 ? UNP P11609 ? ? 'expression tag' 286 8 1 3GML HIS A 287 ? UNP P11609 ? ? 'expression tag' 287 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 C6Q non-polymer . 'N-{(1S,2S,3R)-1-[(alpha-D-galactopyranosyloxy)methyl]-2,3-dihydroxyheptadecyl}-6-phenylhexanamide' '(2S,3S,4R)-N-PHENYLHEXANOYL-1-[(ALPHA-D-GALACTOPYRANOSYL)OXY]-2-AMINO-OCTADECANE-3,4-DIOL' 'C36 H63 N O9' 653.887 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PLM non-polymer . 'PALMITIC ACID' ? 'C16 H32 O2' 256.424 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3GML _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.43 _exptl_crystal.density_percent_sol 49.28 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.pdbx_details '0.2 M Malonate pH 4.5, 20%(v/v) PEG3350, VAPOR DIFFUSION, SITTING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.pdbx_collection_date 2007-11-16 _diffrn_detector.details 'flat mirror' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9795 # _reflns.entry_id 3GML _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.0 _reflns.d_resolution_high 1.7 _reflns.number_obs 46351 _reflns.number_all 46351 _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.038 _reflns.pdbx_netI_over_sigmaI 18.1 _reflns.B_iso_Wilson_estimate 32.4 _reflns.pdbx_redundancy 3.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.7 _reflns_shell.d_res_low 1.8 _reflns_shell.percent_possible_all 99.7 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.437 _reflns_shell.meanI_over_sigI_obs 3.1 _reflns_shell.pdbx_redundancy 3.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 7294 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3GML _refine.ls_number_reflns_obs 44007 _refine.ls_number_reflns_all 46351 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.27 _refine.ls_d_res_high 1.70 _refine.ls_percent_reflns_obs 99.57 _refine.ls_R_factor_obs 0.17846 _refine.ls_R_factor_all 0.17846 _refine.ls_R_factor_R_work 0.17654 _refine.ls_R_factor_R_free 0.21554 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 2344 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.964 _refine.correlation_coeff_Fo_to_Fc_free 0.947 _refine.B_iso_mean 24.062 _refine.aniso_B[1][1] -1.72 _refine.aniso_B[2][2] 1.86 _refine.aniso_B[3][3] -0.92 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -1.37 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB entry 2AKR' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.107 _refine.pdbx_overall_ESU_R_Free 0.107 _refine.overall_SU_ML 0.084 _refine.overall_SU_B 5.571 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2975 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 226 _refine_hist.number_atoms_solvent 326 _refine_hist.number_atoms_total 3527 _refine_hist.d_res_high 1.70 _refine_hist.d_res_low 28.27 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.022 0.021 ? 3381 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.110 1.999 ? 4600 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.608 5.000 ? 380 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 33.062 24.211 ? 152 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.971 15.000 ? 526 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.570 15.000 ? 16 'X-RAY DIFFRACTION' ? r_chiral_restr 0.143 0.200 ? 507 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.011 0.021 ? 2501 'X-RAY DIFFRACTION' ? r_mcbond_it 1.297 1.500 ? 1883 'X-RAY DIFFRACTION' ? r_mcangle_it 2.131 2.000 ? 3062 'X-RAY DIFFRACTION' ? r_scbond_it 3.280 3.000 ? 1498 'X-RAY DIFFRACTION' ? r_scangle_it 5.073 4.500 ? 1538 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.700 _refine_ls_shell.d_res_low 1.744 _refine_ls_shell.number_reflns_R_work 3268 _refine_ls_shell.R_factor_R_work 0.291 _refine_ls_shell.percent_reflns_obs 99.80 _refine_ls_shell.R_factor_R_free 0.354 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 164 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 3432 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3GML _struct.title 'Structure of mouse CD1d in complex with C6Ph' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3GML _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text ;CD1, NKT cell, glycolipid, antigen presentation, Cell membrane, Disulfide bond, Endosome, Glycoprotein, Immune response, Immunoglobulin domain, Innate immunity, Lysosome, Membrane, Transmembrane, MHC I, Secreted, Immune System ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 7 ? H N N 8 ? I N N 8 ? J N N 8 ? K N N 8 ? L N N 9 ? M N N 9 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 59 ? SER A 89 ? SER A 59 SER A 89 1 ? 31 HELX_P HELX_P2 2 PRO A 140 ? TRP A 142 ? PRO A 140 TRP A 142 5 ? 3 HELX_P HELX_P3 3 LEU A 143 ? ALA A 152 ? LEU A 143 ALA A 152 1 ? 10 HELX_P HELX_P4 4 ASP A 153 ? ASP A 166 ? ASP A 153 ASP A 166 1 ? 14 HELX_P HELX_P5 5 ASP A 166 ? GLY A 179 ? ASP A 166 GLY A 179 1 ? 14 HELX_P HELX_P6 6 GLY A 179 ? GLU A 184 ? GLY A 179 GLU A 184 1 ? 6 HELX_P HELX_P7 7 HIS A 267 ? GLY A 271 ? HIS A 267 GLY A 271 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 104 SG ? ? ? 1_555 A CYS 168 SG ? ? A CYS 104 A CYS 168 1_555 ? ? ? ? ? ? ? 2.216 ? ? disulf2 disulf ? ? A CYS 208 SG ? ? ? 1_555 A CYS 263 SG ? ? A CYS 208 A CYS 263 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf3 disulf ? ? B CYS 25 SG ? ? ? 1_555 B CYS 80 SG ? ? B CYS 25 B CYS 80 1_555 ? ? ? ? ? ? ? 2.012 ? ? covale1 covale one ? A ASN 20 ND2 ? ? ? 1_555 E NAG . C1 ? ? A ASN 20 A NAG 288 1_555 ? ? ? ? ? ? ? 1.428 ? N-Glycosylation covale2 covale one ? A ASN 42 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 42 C NAG 1 1_555 ? ? ? ? ? ? ? 1.432 ? N-Glycosylation covale3 covale one ? A ASN 165 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 165 D NAG 1 1_555 ? ? ? ? ? ? ? 1.449 ? N-Glycosylation covale4 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.427 ? ? covale5 covale both ? C NAG . O4 ? ? ? 1_555 C BMA . C1 ? ? C NAG 2 C BMA 3 1_555 ? ? ? ? ? ? ? 1.459 ? ? covale6 covale both ? C BMA . O3 ? ? ? 1_555 C MAN . C1 ? ? C BMA 3 C MAN 4 1_555 ? ? ? ? ? ? ? 1.451 ? ? covale7 covale both ? C MAN . O2 ? ? ? 1_555 C MAN . C1 ? ? C MAN 4 C MAN 5 1_555 ? ? ? ? ? ? ? 1.452 ? ? covale8 covale both ? D NAG . O4 ? ? ? 1_555 D NAG . C1 ? ? D NAG 1 D NAG 2 1_555 ? ? ? ? ? ? ? 1.423 ? ? covale9 covale both ? D NAG . O6 ? ? ? 1_555 D FUC . C1 ? ? D NAG 1 D FUC 6 1_555 ? ? ? ? ? ? ? 1.483 ? ? covale10 covale both ? D NAG . O4 ? ? ? 1_555 D BMA . C1 ? ? D NAG 2 D BMA 3 1_555 ? ? ? ? ? ? ? 1.418 ? ? covale11 covale both ? D BMA . O3 ? ? ? 1_555 D MAN . C1 ? ? D BMA 3 D MAN 4 1_555 ? ? ? ? ? ? ? 1.439 ? ? covale12 covale both ? D BMA . O6 ? ? ? 1_555 D MAN . C1 ? ? D BMA 3 D MAN 5 1_555 ? ? ? ? ? ? ? 1.445 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 89 A . ? SER 89 A PRO 90 A ? PRO 90 A 1 3.23 2 TYR 94 A . ? TYR 94 A PRO 95 A ? PRO 95 A 1 -0.05 3 TYR 214 A . ? TYR 214 A PRO 215 A ? PRO 215 A 1 5.32 4 HIS 31 B . ? HIS 31 B PRO 32 B ? PRO 32 B 1 2.55 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 4 ? C ? 4 ? D ? 4 ? E ? 4 ? F ? 4 ? G ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 48 ? PHE A 49 ? SER A 48 PHE A 49 A 2 LEU A 35 ? TRP A 40 ? LEU A 35 TRP A 40 A 3 TRP A 23 ? LEU A 32 ? TRP A 23 LEU A 32 A 4 TYR A 8 ? ASN A 20 ? TYR A 8 ASN A 20 A 5 ILE A 96 ? MET A 106 ? ILE A 96 MET A 106 A 6 SER A 112 ? PHE A 120 ? SER A 112 PHE A 120 A 7 LYS A 123 ? TRP A 129 ? LYS A 123 TRP A 129 A 8 SER A 132 ? THR A 135 ? SER A 132 THR A 135 B 1 VAL A 190 ? SER A 194 ? VAL A 190 SER A 194 B 2 ARG A 204 ? PHE A 213 ? ARG A 204 PHE A 213 B 3 TRP A 245 ? VAL A 253 ? TRP A 245 VAL A 253 B 4 HIS A 233 ? ARG A 234 ? HIS A 233 ARG A 234 C 1 VAL A 190 ? SER A 194 ? VAL A 190 SER A 194 C 2 ARG A 204 ? PHE A 213 ? ARG A 204 PHE A 213 C 3 TRP A 245 ? VAL A 253 ? TRP A 245 VAL A 253 C 4 LEU A 238 ? PRO A 239 ? LEU A 238 PRO A 239 D 1 GLN A 227 ? GLU A 228 ? GLN A 227 GLU A 228 D 2 TRP A 219 ? ARG A 224 ? TRP A 219 ARG A 224 D 3 LEU A 261 ? LYS A 266 ? LEU A 261 LYS A 266 D 4 ILE A 275 ? TYR A 278 ? ILE A 275 TYR A 278 E 1 GLN B 6 ? SER B 11 ? GLN B 6 SER B 11 E 2 ASN B 21 ? PHE B 30 ? ASN B 21 PHE B 30 E 3 PHE B 62 ? PHE B 70 ? PHE B 62 PHE B 70 E 4 GLU B 50 ? MET B 51 ? GLU B 50 MET B 51 F 1 GLN B 6 ? SER B 11 ? GLN B 6 SER B 11 F 2 ASN B 21 ? PHE B 30 ? ASN B 21 PHE B 30 F 3 PHE B 62 ? PHE B 70 ? PHE B 62 PHE B 70 F 4 SER B 55 ? PHE B 56 ? SER B 55 PHE B 56 G 1 LYS B 44 ? LYS B 45 ? LYS B 44 LYS B 45 G 2 GLU B 36 ? LYS B 41 ? GLU B 36 LYS B 41 G 3 TYR B 78 ? LYS B 83 ? TYR B 78 LYS B 83 G 4 LYS B 91 ? TYR B 94 ? LYS B 91 TYR B 94 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O SER A 48 ? O SER A 48 N ARG A 39 ? N ARG A 39 A 2 3 O LEU A 35 ? O LEU A 35 N LEU A 32 ? N LEU A 32 A 3 4 O VAL A 29 ? O VAL A 29 N LEU A 13 ? N LEU A 13 A 4 5 N CYS A 12 ? N CYS A 12 O ALA A 102 ? O ALA A 102 A 5 6 N GLU A 105 ? N GLU A 105 O GLU A 113 ? O GLU A 113 A 6 7 N VAL A 118 ? N VAL A 118 O VAL A 125 ? O VAL A 125 A 7 8 N TRP A 129 ? N TRP A 129 O SER A 132 ? O SER A 132 B 1 2 N TRP A 192 ? N TRP A 192 O HIS A 209 ? O HIS A 209 B 2 3 N ARG A 204 ? N ARG A 204 O VAL A 253 ? O VAL A 253 B 3 4 O THR A 250 ? O THR A 250 N HIS A 233 ? N HIS A 233 C 1 2 N TRP A 192 ? N TRP A 192 O HIS A 209 ? O HIS A 209 C 2 3 N ARG A 204 ? N ARG A 204 O VAL A 253 ? O VAL A 253 C 3 4 O TYR A 246 ? O TYR A 246 N LEU A 238 ? N LEU A 238 D 1 2 O GLN A 227 ? O GLN A 227 N ARG A 224 ? N ARG A 224 D 2 3 N MET A 221 ? N MET A 221 O ARG A 264 ? O ARG A 264 D 3 4 N VAL A 265 ? N VAL A 265 O ILE A 275 ? O ILE A 275 E 1 2 N TYR B 10 ? N TYR B 10 O ASN B 24 ? O ASN B 24 E 2 3 N ASN B 21 ? N ASN B 21 O PHE B 70 ? O PHE B 70 E 3 4 O HIS B 67 ? O HIS B 67 N GLU B 50 ? N GLU B 50 F 1 2 N TYR B 10 ? N TYR B 10 O ASN B 24 ? O ASN B 24 F 2 3 N ASN B 21 ? N ASN B 21 O PHE B 70 ? O PHE B 70 F 3 4 O TYR B 63 ? O TYR B 63 N SER B 55 ? N SER B 55 G 1 2 O LYS B 44 ? O LYS B 44 N LYS B 41 ? N LYS B 41 G 2 3 N GLN B 38 ? N GLN B 38 O ARG B 81 ? O ARG B 81 G 3 4 N CYS B 80 ? N CYS B 80 O VAL B 93 ? O VAL B 93 # _database_PDB_matrix.entry_id 3GML _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3GML _atom_sites.fract_transf_matrix[1][1] 0.024004 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.007110 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010243 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018870 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 ? ? ? A . n A 1 2 GLU 2 2 ? ? ? A . n A 1 3 ALA 3 3 ? ? ? A . n A 1 4 GLN 4 4 ? ? ? A . n A 1 5 GLN 5 5 ? ? ? A . n A 1 6 LYS 6 6 ? ? ? A . n A 1 7 ASN 7 7 7 ASN ASN A . n A 1 8 TYR 8 8 8 TYR TYR A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 PHE 10 10 10 PHE PHE A . n A 1 11 ARG 11 11 11 ARG ARG A . n A 1 12 CYS 12 12 12 CYS CYS A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 MET 15 15 15 MET MET A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 PHE 18 18 18 PHE PHE A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 ASN 20 20 20 ASN ASN A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 TRP 23 23 23 TRP TRP A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 TRP 31 31 31 TRP TRP A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 GLN 36 36 36 GLN GLN A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 HIS 38 38 38 HIS HIS A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 TRP 40 40 40 TRP TRP A . n A 1 41 SER 41 41 41 SER SER A . n A 1 42 ASN 42 42 42 ASN ASN A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 THR 46 46 46 THR THR A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 SER 48 48 48 SER SER A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 PRO 52 52 52 PRO PRO A . n A 1 53 TRP 53 53 53 TRP TRP A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 GLN 55 55 55 GLN GLN A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 LYS 57 57 57 LYS LYS A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 ASN 60 60 60 ASN ASN A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 GLN 62 62 62 GLN GLN A . n A 1 63 TRP 63 63 63 TRP TRP A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 GLN 67 67 67 GLN GLN A . n A 1 68 HIS 68 68 68 HIS HIS A . n A 1 69 MET 69 69 69 MET MET A . n A 1 70 PHE 70 70 70 PHE PHE A . n A 1 71 GLN 71 71 71 GLN GLN A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 TYR 73 73 73 TYR TYR A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 PHE 77 77 77 PHE PHE A . n A 1 78 THR 78 78 78 THR THR A . n A 1 79 ARG 79 79 79 ARG ARG A . n A 1 80 ASP 80 80 80 ASP ASP A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 GLN 82 82 82 GLN GLN A . n A 1 83 GLU 83 83 83 GLU GLU A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 VAL 85 85 85 VAL VAL A . n A 1 86 LYS 86 86 86 LYS LYS A . n A 1 87 MET 87 87 87 MET MET A . n A 1 88 MET 88 88 88 MET MET A . n A 1 89 SER 89 89 89 SER SER A . n A 1 90 PRO 90 90 90 PRO PRO A . n A 1 91 LYS 91 91 91 LYS LYS A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 ASP 93 93 93 ASP ASP A . n A 1 94 TYR 94 94 94 TYR TYR A . n A 1 95 PRO 95 95 95 PRO PRO A . n A 1 96 ILE 96 96 96 ILE ILE A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 GLN 99 99 99 GLN GLN A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 ALA 102 102 102 ALA ALA A . n A 1 103 GLY 103 103 103 GLY GLY A . n A 1 104 CYS 104 104 104 CYS CYS A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 MET 106 106 106 MET MET A . n A 1 107 TYR 107 107 107 TYR TYR A . n A 1 108 PRO 108 108 108 PRO PRO A . n A 1 109 GLY 109 109 109 GLY GLY A . n A 1 110 ASN 110 110 110 ASN ASN A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 SER 112 112 112 SER SER A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 SER 114 114 114 SER SER A . n A 1 115 PHE 115 115 115 PHE PHE A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 HIS 117 117 117 HIS HIS A . n A 1 118 VAL 118 118 118 VAL VAL A . n A 1 119 ALA 119 119 119 ALA ALA A . n A 1 120 PHE 120 120 120 PHE PHE A . n A 1 121 GLN 121 121 121 GLN GLN A . n A 1 122 GLY 122 122 122 GLY GLY A . n A 1 123 LYS 123 123 123 LYS LYS A . n A 1 124 TYR 124 124 124 TYR TYR A . n A 1 125 VAL 125 125 125 VAL VAL A . n A 1 126 VAL 126 126 126 VAL VAL A . n A 1 127 ARG 127 127 127 ARG ARG A . n A 1 128 PHE 128 128 128 PHE PHE A . n A 1 129 TRP 129 129 129 TRP TRP A . n A 1 130 GLY 130 130 130 GLY GLY A . n A 1 131 THR 131 131 131 THR THR A . n A 1 132 SER 132 132 132 SER SER A . n A 1 133 TRP 133 133 133 TRP TRP A . n A 1 134 GLN 134 134 134 GLN GLN A . n A 1 135 THR 135 135 135 THR THR A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 PRO 137 137 137 PRO PRO A . n A 1 138 GLY 138 138 138 GLY GLY A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 PRO 140 140 140 PRO PRO A . n A 1 141 SER 141 141 141 SER SER A . n A 1 142 TRP 142 142 142 TRP TRP A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 ASP 144 144 144 ASP ASP A . n A 1 145 LEU 145 145 145 LEU LEU A . n A 1 146 PRO 146 146 146 PRO PRO A . n A 1 147 ILE 147 147 147 ILE ILE A . n A 1 148 LYS 148 148 148 LYS LYS A . n A 1 149 VAL 149 149 149 VAL VAL A . n A 1 150 LEU 150 150 150 LEU LEU A . n A 1 151 ASN 151 151 151 ASN ASN A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 ASP 153 153 153 ASP ASP A . n A 1 154 GLN 154 154 154 GLN GLN A . n A 1 155 GLY 155 155 155 GLY GLY A . n A 1 156 THR 156 156 156 THR THR A . n A 1 157 SER 157 157 157 SER SER A . n A 1 158 ALA 158 158 158 ALA ALA A . n A 1 159 THR 159 159 159 THR THR A . n A 1 160 VAL 160 160 160 VAL VAL A . n A 1 161 GLN 161 161 161 GLN GLN A . n A 1 162 MET 162 162 162 MET MET A . n A 1 163 LEU 163 163 163 LEU LEU A . n A 1 164 LEU 164 164 164 LEU LEU A . n A 1 165 ASN 165 165 165 ASN ASN A . n A 1 166 ASP 166 166 166 ASP ASP A . n A 1 167 THR 167 167 167 THR THR A . n A 1 168 CYS 168 168 168 CYS CYS A . n A 1 169 PRO 169 169 169 PRO PRO A . n A 1 170 LEU 170 170 170 LEU LEU A . n A 1 171 PHE 171 171 171 PHE PHE A . n A 1 172 VAL 172 172 172 VAL VAL A . n A 1 173 ARG 173 173 173 ARG ARG A . n A 1 174 GLY 174 174 174 GLY GLY A . n A 1 175 LEU 175 175 175 LEU LEU A . n A 1 176 LEU 176 176 176 LEU LEU A . n A 1 177 GLU 177 177 177 GLU GLU A . n A 1 178 ALA 178 178 178 ALA ALA A . n A 1 179 GLY 179 179 179 GLY GLY A . n A 1 180 LYS 180 180 180 LYS LYS A . n A 1 181 SER 181 181 181 SER SER A . n A 1 182 ASP 182 182 182 ASP ASP A . n A 1 183 LEU 183 183 183 LEU LEU A . n A 1 184 GLU 184 184 184 GLU GLU A . n A 1 185 LYS 185 185 185 LYS LYS A . n A 1 186 GLN 186 186 186 GLN GLN A . n A 1 187 GLU 187 187 187 GLU GLU A . n A 1 188 LYS 188 188 188 LYS LYS A . n A 1 189 PRO 189 189 189 PRO PRO A . n A 1 190 VAL 190 190 190 VAL VAL A . n A 1 191 ALA 191 191 191 ALA ALA A . n A 1 192 TRP 192 192 192 TRP TRP A . n A 1 193 LEU 193 193 193 LEU LEU A . n A 1 194 SER 194 194 194 SER SER A . n A 1 195 SER 195 195 195 SER SER A . n A 1 196 VAL 196 196 ? ? ? A . n A 1 197 PRO 197 197 ? ? ? A . n A 1 198 SER 198 198 ? ? ? A . n A 1 199 SER 199 199 ? ? ? A . n A 1 200 ALA 200 200 ? ? ? A . n A 1 201 HIS 201 201 ? ? ? A . n A 1 202 GLY 202 202 ? ? ? A . n A 1 203 HIS 203 203 203 HIS HIS A . n A 1 204 ARG 204 204 204 ARG ARG A . n A 1 205 GLN 205 205 205 GLN GLN A . n A 1 206 LEU 206 206 206 LEU LEU A . n A 1 207 VAL 207 207 207 VAL VAL A . n A 1 208 CYS 208 208 208 CYS CYS A . n A 1 209 HIS 209 209 209 HIS HIS A . n A 1 210 VAL 210 210 210 VAL VAL A . n A 1 211 SER 211 211 211 SER SER A . n A 1 212 GLY 212 212 212 GLY GLY A . n A 1 213 PHE 213 213 213 PHE PHE A . n A 1 214 TYR 214 214 214 TYR TYR A . n A 1 215 PRO 215 215 215 PRO PRO A . n A 1 216 LYS 216 216 216 LYS LYS A . n A 1 217 PRO 217 217 217 PRO PRO A . n A 1 218 VAL 218 218 218 VAL VAL A . n A 1 219 TRP 219 219 219 TRP TRP A . n A 1 220 VAL 220 220 220 VAL VAL A . n A 1 221 MET 221 221 221 MET MET A . n A 1 222 TRP 222 222 222 TRP TRP A . n A 1 223 MET 223 223 223 MET MET A . n A 1 224 ARG 224 224 224 ARG ARG A . n A 1 225 GLY 225 225 225 GLY GLY A . n A 1 226 ASP 226 226 226 ASP ASP A . n A 1 227 GLN 227 227 227 GLN GLN A . n A 1 228 GLU 228 228 228 GLU GLU A . n A 1 229 GLN 229 229 229 GLN GLN A . n A 1 230 GLN 230 230 230 GLN GLN A . n A 1 231 GLY 231 231 231 GLY GLY A . n A 1 232 THR 232 232 232 THR THR A . n A 1 233 HIS 233 233 233 HIS HIS A . n A 1 234 ARG 234 234 234 ARG ARG A . n A 1 235 GLY 235 235 235 GLY GLY A . n A 1 236 ASP 236 236 236 ASP ASP A . n A 1 237 PHE 237 237 237 PHE PHE A . n A 1 238 LEU 238 238 238 LEU LEU A . n A 1 239 PRO 239 239 239 PRO PRO A . n A 1 240 ASN 240 240 240 ASN ASN A . n A 1 241 ALA 241 241 241 ALA ALA A . n A 1 242 ASP 242 242 242 ASP ASP A . n A 1 243 GLU 243 243 243 GLU GLU A . n A 1 244 THR 244 244 244 THR THR A . n A 1 245 TRP 245 245 245 TRP TRP A . n A 1 246 TYR 246 246 246 TYR TYR A . n A 1 247 LEU 247 247 247 LEU LEU A . n A 1 248 GLN 248 248 248 GLN GLN A . n A 1 249 ALA 249 249 249 ALA ALA A . n A 1 250 THR 250 250 250 THR THR A . n A 1 251 LEU 251 251 251 LEU LEU A . n A 1 252 ASP 252 252 252 ASP ASP A . n A 1 253 VAL 253 253 253 VAL VAL A . n A 1 254 GLU 254 254 254 GLU GLU A . n A 1 255 ALA 255 255 255 ALA ALA A . n A 1 256 GLY 256 256 256 GLY GLY A . n A 1 257 GLU 257 257 257 GLU GLU A . n A 1 258 GLU 258 258 258 GLU GLU A . n A 1 259 ALA 259 259 259 ALA ALA A . n A 1 260 GLY 260 260 260 GLY GLY A . n A 1 261 LEU 261 261 261 LEU LEU A . n A 1 262 ALA 262 262 262 ALA ALA A . n A 1 263 CYS 263 263 263 CYS CYS A . n A 1 264 ARG 264 264 264 ARG ARG A . n A 1 265 VAL 265 265 265 VAL VAL A . n A 1 266 LYS 266 266 266 LYS LYS A . n A 1 267 HIS 267 267 267 HIS HIS A . n A 1 268 SER 268 268 268 SER SER A . n A 1 269 SER 269 269 269 SER SER A . n A 1 270 LEU 270 270 270 LEU LEU A . n A 1 271 GLY 271 271 271 GLY GLY A . n A 1 272 GLY 272 272 272 GLY GLY A . n A 1 273 GLN 273 273 273 GLN GLN A . n A 1 274 ASP 274 274 274 ASP ASP A . n A 1 275 ILE 275 275 275 ILE ILE A . n A 1 276 ILE 276 276 276 ILE ILE A . n A 1 277 LEU 277 277 277 LEU LEU A . n A 1 278 TYR 278 278 278 TYR TYR A . n A 1 279 TRP 279 279 279 TRP TRP A . n A 1 280 GLY 280 280 280 GLY GLY A . n A 1 281 SER 281 281 281 SER SER A . n A 1 282 HIS 282 282 ? ? ? A . n A 1 283 HIS 283 283 ? ? ? A . n A 1 284 HIS 284 284 ? ? ? A . n A 1 285 HIS 285 285 ? ? ? A . n A 1 286 HIS 286 286 ? ? ? A . n A 1 287 HIS 287 287 ? ? ? A . n B 2 1 ILE 1 1 1 ILE ILE B . n B 2 2 GLN 2 2 2 GLN GLN B . n B 2 3 LYS 3 3 3 LYS LYS B . n B 2 4 THR 4 4 4 THR THR B . n B 2 5 PRO 5 5 5 PRO PRO B . n B 2 6 GLN 6 6 6 GLN GLN B . n B 2 7 ILE 7 7 7 ILE ILE B . n B 2 8 GLN 8 8 8 GLN GLN B . n B 2 9 VAL 9 9 9 VAL VAL B . n B 2 10 TYR 10 10 10 TYR TYR B . n B 2 11 SER 11 11 11 SER SER B . n B 2 12 ARG 12 12 12 ARG ARG B . n B 2 13 HIS 13 13 13 HIS HIS B . n B 2 14 PRO 14 14 14 PRO PRO B . n B 2 15 PRO 15 15 15 PRO PRO B . n B 2 16 GLU 16 16 16 GLU GLU B . n B 2 17 ASN 17 17 17 ASN ASN B . n B 2 18 GLY 18 18 18 GLY GLY B . n B 2 19 LYS 19 19 19 LYS LYS B . n B 2 20 PRO 20 20 20 PRO PRO B . n B 2 21 ASN 21 21 21 ASN ASN B . n B 2 22 ILE 22 22 22 ILE ILE B . n B 2 23 LEU 23 23 23 LEU LEU B . n B 2 24 ASN 24 24 24 ASN ASN B . n B 2 25 CYS 25 25 25 CYS CYS B . n B 2 26 TYR 26 26 26 TYR TYR B . n B 2 27 VAL 27 27 27 VAL VAL B . n B 2 28 THR 28 28 28 THR THR B . n B 2 29 GLN 29 29 29 GLN GLN B . n B 2 30 PHE 30 30 30 PHE PHE B . n B 2 31 HIS 31 31 31 HIS HIS B . n B 2 32 PRO 32 32 32 PRO PRO B . n B 2 33 PRO 33 33 33 PRO PRO B . n B 2 34 HIS 34 34 34 HIS HIS B . n B 2 35 ILE 35 35 35 ILE ILE B . n B 2 36 GLU 36 36 36 GLU GLU B . n B 2 37 ILE 37 37 37 ILE ILE B . n B 2 38 GLN 38 38 38 GLN GLN B . n B 2 39 MET 39 39 39 MET MET B . n B 2 40 LEU 40 40 40 LEU LEU B . n B 2 41 LYS 41 41 41 LYS LYS B . n B 2 42 ASN 42 42 42 ASN ASN B . n B 2 43 GLY 43 43 43 GLY GLY B . n B 2 44 LYS 44 44 44 LYS LYS B . n B 2 45 LYS 45 45 45 LYS LYS B . n B 2 46 ILE 46 46 46 ILE ILE B . n B 2 47 PRO 47 47 47 PRO PRO B . n B 2 48 LYS 48 48 48 LYS LYS B . n B 2 49 VAL 49 49 49 VAL VAL B . n B 2 50 GLU 50 50 50 GLU GLU B . n B 2 51 MET 51 51 51 MET MET B . n B 2 52 SER 52 52 52 SER SER B . n B 2 53 ASP 53 53 53 ASP ASP B . n B 2 54 MET 54 54 54 MET MET B . n B 2 55 SER 55 55 55 SER SER B . n B 2 56 PHE 56 56 56 PHE PHE B . n B 2 57 SER 57 57 57 SER SER B . n B 2 58 LYS 58 58 58 LYS LYS B . n B 2 59 ASP 59 59 59 ASP ASP B . n B 2 60 TRP 60 60 60 TRP TRP B . n B 2 61 SER 61 61 61 SER SER B . n B 2 62 PHE 62 62 62 PHE PHE B . n B 2 63 TYR 63 63 63 TYR TYR B . n B 2 64 ILE 64 64 64 ILE ILE B . n B 2 65 LEU 65 65 65 LEU LEU B . n B 2 66 ALA 66 66 66 ALA ALA B . n B 2 67 HIS 67 67 67 HIS HIS B . n B 2 68 THR 68 68 68 THR THR B . n B 2 69 GLU 69 69 69 GLU GLU B . n B 2 70 PHE 70 70 70 PHE PHE B . n B 2 71 THR 71 71 71 THR THR B . n B 2 72 PRO 72 72 72 PRO PRO B . n B 2 73 THR 73 73 73 THR THR B . n B 2 74 GLU 74 74 74 GLU GLU B . n B 2 75 THR 75 75 75 THR THR B . n B 2 76 ASP 76 76 76 ASP ASP B . n B 2 77 THR 77 77 77 THR THR B . n B 2 78 TYR 78 78 78 TYR TYR B . n B 2 79 ALA 79 79 79 ALA ALA B . n B 2 80 CYS 80 80 80 CYS CYS B . n B 2 81 ARG 81 81 81 ARG ARG B . n B 2 82 VAL 82 82 82 VAL VAL B . n B 2 83 LYS 83 83 83 LYS LYS B . n B 2 84 HIS 84 84 84 HIS HIS B . n B 2 85 ALA 85 85 85 ALA ALA B . n B 2 86 SER 86 86 86 SER SER B . n B 2 87 MET 87 87 87 MET MET B . n B 2 88 ALA 88 88 88 ALA ALA B . n B 2 89 GLU 89 89 89 GLU GLU B . n B 2 90 PRO 90 90 90 PRO PRO B . n B 2 91 LYS 91 91 91 LYS LYS B . n B 2 92 THR 92 92 92 THR THR B . n B 2 93 VAL 93 93 93 VAL VAL B . n B 2 94 TYR 94 94 94 TYR TYR B . n B 2 95 TRP 95 95 95 TRP TRP B . n B 2 96 ASP 96 96 96 ASP ASP B . n B 2 97 ARG 97 97 97 ARG ARG B . n B 2 98 ASP 98 98 98 ASP ASP B . n B 2 99 MET 99 99 99 MET MET B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 NAG 1 288 1 NAG NAG A . F 6 C6Q 1 300 1 C6Q C6Q A . G 7 PLM 1 301 2 PLM PLM A . H 8 EDO 1 302 1 EDO EDO A . I 8 EDO 1 303 3 EDO EDO A . J 8 EDO 1 304 4 EDO EDO A . K 8 EDO 1 100 2 EDO EDO B . L 9 HOH 1 305 305 HOH HOH A . L 9 HOH 2 306 2 HOH HOH A . L 9 HOH 3 307 11 HOH HOH A . L 9 HOH 4 308 308 HOH HOH A . L 9 HOH 5 309 12 HOH HOH A . L 9 HOH 6 310 14 HOH HOH A . L 9 HOH 7 311 311 HOH HOH A . L 9 HOH 8 312 15 HOH HOH A . L 9 HOH 9 313 16 HOH HOH A . L 9 HOH 10 314 314 HOH HOH A . L 9 HOH 11 315 315 HOH HOH A . L 9 HOH 12 316 316 HOH HOH A . L 9 HOH 13 317 317 HOH HOH A . L 9 HOH 14 318 18 HOH HOH A . L 9 HOH 15 319 20 HOH HOH A . L 9 HOH 16 320 23 HOH HOH A . L 9 HOH 17 321 321 HOH HOH A . L 9 HOH 18 322 24 HOH HOH A . L 9 HOH 19 323 25 HOH HOH A . L 9 HOH 20 324 26 HOH HOH A . L 9 HOH 21 325 27 HOH HOH A . L 9 HOH 22 326 326 HOH HOH A . L 9 HOH 23 327 28 HOH HOH A . L 9 HOH 24 328 328 HOH HOH A . L 9 HOH 25 329 329 HOH HOH A . L 9 HOH 26 330 29 HOH HOH A . L 9 HOH 27 331 331 HOH HOH A . L 9 HOH 28 332 30 HOH HOH A . L 9 HOH 29 333 333 HOH HOH A . L 9 HOH 30 334 334 HOH HOH A . L 9 HOH 31 335 335 HOH HOH A . L 9 HOH 32 336 336 HOH HOH A . L 9 HOH 33 338 32 HOH HOH A . L 9 HOH 34 339 339 HOH HOH A . L 9 HOH 35 340 340 HOH HOH A . L 9 HOH 36 341 341 HOH HOH A . L 9 HOH 37 342 33 HOH HOH A . L 9 HOH 38 343 34 HOH HOH A . L 9 HOH 39 344 344 HOH HOH A . L 9 HOH 40 345 345 HOH HOH A . L 9 HOH 41 346 346 HOH HOH A . L 9 HOH 42 347 347 HOH HOH A . L 9 HOH 43 348 348 HOH HOH A . L 9 HOH 44 349 349 HOH HOH A . L 9 HOH 45 350 350 HOH HOH A . L 9 HOH 46 351 351 HOH HOH A . L 9 HOH 47 352 352 HOH HOH A . L 9 HOH 48 353 35 HOH HOH A . L 9 HOH 49 354 37 HOH HOH A . L 9 HOH 50 355 39 HOH HOH A . L 9 HOH 51 356 356 HOH HOH A . L 9 HOH 52 357 357 HOH HOH A . L 9 HOH 53 358 358 HOH HOH A . L 9 HOH 54 359 359 HOH HOH A . L 9 HOH 55 360 41 HOH HOH A . L 9 HOH 56 361 361 HOH HOH A . L 9 HOH 57 362 362 HOH HOH A . L 9 HOH 58 363 363 HOH HOH A . L 9 HOH 59 364 364 HOH HOH A . L 9 HOH 60 365 365 HOH HOH A . L 9 HOH 61 366 366 HOH HOH A . L 9 HOH 62 367 367 HOH HOH A . L 9 HOH 63 368 42 HOH HOH A . L 9 HOH 64 369 369 HOH HOH A . L 9 HOH 65 370 370 HOH HOH A . L 9 HOH 66 371 45 HOH HOH A . L 9 HOH 67 372 372 HOH HOH A . L 9 HOH 68 373 373 HOH HOH A . L 9 HOH 69 374 374 HOH HOH A . L 9 HOH 70 375 375 HOH HOH A . L 9 HOH 71 376 46 HOH HOH A . L 9 HOH 72 377 377 HOH HOH A . L 9 HOH 73 378 47 HOH HOH A . L 9 HOH 74 379 379 HOH HOH A . L 9 HOH 75 380 380 HOH HOH A . L 9 HOH 76 381 381 HOH HOH A . L 9 HOH 77 382 382 HOH HOH A . L 9 HOH 78 383 383 HOH HOH A . L 9 HOH 79 384 384 HOH HOH A . L 9 HOH 80 385 48 HOH HOH A . L 9 HOH 81 386 386 HOH HOH A . L 9 HOH 82 387 387 HOH HOH A . L 9 HOH 83 388 388 HOH HOH A . L 9 HOH 84 389 50 HOH HOH A . L 9 HOH 85 390 390 HOH HOH A . L 9 HOH 86 391 52 HOH HOH A . L 9 HOH 87 392 54 HOH HOH A . L 9 HOH 88 393 55 HOH HOH A . L 9 HOH 89 394 394 HOH HOH A . L 9 HOH 90 395 56 HOH HOH A . L 9 HOH 91 396 59 HOH HOH A . L 9 HOH 92 397 60 HOH HOH A . L 9 HOH 93 398 62 HOH HOH A . L 9 HOH 94 399 399 HOH HOH A . L 9 HOH 95 400 400 HOH HOH A . L 9 HOH 96 401 401 HOH HOH A . L 9 HOH 97 402 63 HOH HOH A . L 9 HOH 98 403 65 HOH HOH A . L 9 HOH 99 404 404 HOH HOH A . L 9 HOH 100 405 405 HOH HOH A . L 9 HOH 101 406 67 HOH HOH A . L 9 HOH 102 407 69 HOH HOH A . L 9 HOH 103 408 72 HOH HOH A . L 9 HOH 104 409 74 HOH HOH A . L 9 HOH 105 410 77 HOH HOH A . L 9 HOH 106 411 78 HOH HOH A . L 9 HOH 107 412 83 HOH HOH A . L 9 HOH 108 413 84 HOH HOH A . L 9 HOH 109 414 85 HOH HOH A . L 9 HOH 110 415 86 HOH HOH A . L 9 HOH 111 416 87 HOH HOH A . L 9 HOH 112 417 88 HOH HOH A . L 9 HOH 113 418 91 HOH HOH A . L 9 HOH 114 419 92 HOH HOH A . L 9 HOH 115 420 93 HOH HOH A . L 9 HOH 116 421 95 HOH HOH A . L 9 HOH 117 422 96 HOH HOH A . L 9 HOH 118 423 97 HOH HOH A . L 9 HOH 119 424 98 HOH HOH A . L 9 HOH 120 425 101 HOH HOH A . L 9 HOH 121 426 102 HOH HOH A . L 9 HOH 122 427 103 HOH HOH A . L 9 HOH 123 428 107 HOH HOH A . L 9 HOH 124 429 109 HOH HOH A . L 9 HOH 125 430 110 HOH HOH A . L 9 HOH 126 431 114 HOH HOH A . L 9 HOH 127 432 115 HOH HOH A . L 9 HOH 128 433 117 HOH HOH A . L 9 HOH 129 434 118 HOH HOH A . L 9 HOH 130 435 119 HOH HOH A . L 9 HOH 131 436 120 HOH HOH A . L 9 HOH 132 437 126 HOH HOH A . L 9 HOH 133 438 127 HOH HOH A . L 9 HOH 134 439 131 HOH HOH A . L 9 HOH 135 440 132 HOH HOH A . L 9 HOH 136 441 133 HOH HOH A . L 9 HOH 137 442 136 HOH HOH A . L 9 HOH 138 443 139 HOH HOH A . L 9 HOH 139 444 142 HOH HOH A . L 9 HOH 140 445 143 HOH HOH A . L 9 HOH 141 446 146 HOH HOH A . L 9 HOH 142 447 147 HOH HOH A . L 9 HOH 143 448 150 HOH HOH A . L 9 HOH 144 449 154 HOH HOH A . L 9 HOH 145 450 155 HOH HOH A . L 9 HOH 146 451 156 HOH HOH A . L 9 HOH 147 452 157 HOH HOH A . L 9 HOH 148 453 158 HOH HOH A . L 9 HOH 149 454 161 HOH HOH A . L 9 HOH 150 455 162 HOH HOH A . L 9 HOH 151 456 163 HOH HOH A . L 9 HOH 152 457 165 HOH HOH A . L 9 HOH 153 458 170 HOH HOH A . L 9 HOH 154 459 171 HOH HOH A . L 9 HOH 155 460 175 HOH HOH A . L 9 HOH 156 461 176 HOH HOH A . L 9 HOH 157 462 180 HOH HOH A . L 9 HOH 158 463 181 HOH HOH A . L 9 HOH 159 464 182 HOH HOH A . L 9 HOH 160 465 183 HOH HOH A . L 9 HOH 161 466 184 HOH HOH A . L 9 HOH 162 467 186 HOH HOH A . L 9 HOH 163 468 187 HOH HOH A . L 9 HOH 164 469 188 HOH HOH A . L 9 HOH 165 470 189 HOH HOH A . L 9 HOH 166 471 190 HOH HOH A . L 9 HOH 167 472 193 HOH HOH A . L 9 HOH 168 473 194 HOH HOH A . L 9 HOH 169 474 195 HOH HOH A . L 9 HOH 170 475 196 HOH HOH A . L 9 HOH 171 476 197 HOH HOH A . L 9 HOH 172 477 198 HOH HOH A . L 9 HOH 173 478 199 HOH HOH A . L 9 HOH 174 479 200 HOH HOH A . L 9 HOH 175 480 201 HOH HOH A . L 9 HOH 176 481 202 HOH HOH A . L 9 HOH 177 482 203 HOH HOH A . L 9 HOH 178 483 204 HOH HOH A . L 9 HOH 179 484 206 HOH HOH A . L 9 HOH 180 485 207 HOH HOH A . L 9 HOH 181 486 209 HOH HOH A . L 9 HOH 182 487 210 HOH HOH A . L 9 HOH 183 488 213 HOH HOH A . L 9 HOH 184 489 215 HOH HOH A . L 9 HOH 185 490 217 HOH HOH A . L 9 HOH 186 491 218 HOH HOH A . L 9 HOH 187 492 220 HOH HOH A . L 9 HOH 188 493 221 HOH HOH A . L 9 HOH 189 494 223 HOH HOH A . L 9 HOH 190 495 224 HOH HOH A . L 9 HOH 191 496 226 HOH HOH A . L 9 HOH 192 497 227 HOH HOH A . L 9 HOH 193 498 228 HOH HOH A . L 9 HOH 194 499 230 HOH HOH A . L 9 HOH 195 500 232 HOH HOH A . L 9 HOH 196 501 235 HOH HOH A . L 9 HOH 197 502 236 HOH HOH A . L 9 HOH 198 503 239 HOH HOH A . L 9 HOH 199 504 240 HOH HOH A . L 9 HOH 200 505 241 HOH HOH A . L 9 HOH 201 506 242 HOH HOH A . L 9 HOH 202 507 243 HOH HOH A . L 9 HOH 203 508 245 HOH HOH A . L 9 HOH 204 509 247 HOH HOH A . L 9 HOH 205 510 249 HOH HOH A . L 9 HOH 206 511 250 HOH HOH A . L 9 HOH 207 512 254 HOH HOH A . L 9 HOH 208 513 255 HOH HOH A . L 9 HOH 209 514 256 HOH HOH A . L 9 HOH 210 515 257 HOH HOH A . L 9 HOH 211 516 262 HOH HOH A . L 9 HOH 212 517 264 HOH HOH A . L 9 HOH 213 518 265 HOH HOH A . L 9 HOH 214 519 267 HOH HOH A . L 9 HOH 215 520 269 HOH HOH A . L 9 HOH 216 521 270 HOH HOH A . L 9 HOH 217 522 275 HOH HOH A . L 9 HOH 218 523 276 HOH HOH A . L 9 HOH 219 524 277 HOH HOH A . L 9 HOH 220 525 279 HOH HOH A . L 9 HOH 221 526 280 HOH HOH A . L 9 HOH 222 527 281 HOH HOH A . L 9 HOH 223 528 283 HOH HOH A . L 9 HOH 224 529 286 HOH HOH A . L 9 HOH 225 530 287 HOH HOH A . L 9 HOH 226 531 290 HOH HOH A . L 9 HOH 227 532 292 HOH HOH A . L 9 HOH 228 533 293 HOH HOH A . L 9 HOH 229 534 296 HOH HOH A . L 9 HOH 230 535 297 HOH HOH A . L 9 HOH 231 536 298 HOH HOH A . L 9 HOH 232 537 304 HOH HOH A . M 9 HOH 1 101 5 HOH HOH B . M 9 HOH 2 102 6 HOH HOH B . M 9 HOH 3 103 7 HOH HOH B . M 9 HOH 4 104 104 HOH HOH B . M 9 HOH 5 105 105 HOH HOH B . M 9 HOH 6 106 106 HOH HOH B . M 9 HOH 7 107 8 HOH HOH B . M 9 HOH 8 108 9 HOH HOH B . M 9 HOH 9 109 10 HOH HOH B . M 9 HOH 10 110 13 HOH HOH B . M 9 HOH 11 111 17 HOH HOH B . M 9 HOH 12 112 19 HOH HOH B . M 9 HOH 13 113 113 HOH HOH B . M 9 HOH 14 114 21 HOH HOH B . M 9 HOH 15 115 31 HOH HOH B . M 9 HOH 16 116 116 HOH HOH B . M 9 HOH 17 117 36 HOH HOH B . M 9 HOH 18 118 38 HOH HOH B . M 9 HOH 19 119 40 HOH HOH B . M 9 HOH 20 120 43 HOH HOH B . M 9 HOH 21 121 44 HOH HOH B . M 9 HOH 22 122 122 HOH HOH B . M 9 HOH 23 123 49 HOH HOH B . M 9 HOH 24 124 51 HOH HOH B . M 9 HOH 25 125 125 HOH HOH B . M 9 HOH 26 126 53 HOH HOH B . M 9 HOH 27 127 57 HOH HOH B . M 9 HOH 28 128 68 HOH HOH B . M 9 HOH 29 129 70 HOH HOH B . M 9 HOH 30 130 130 HOH HOH B . M 9 HOH 31 131 71 HOH HOH B . M 9 HOH 32 132 73 HOH HOH B . M 9 HOH 33 133 75 HOH HOH B . M 9 HOH 34 134 79 HOH HOH B . M 9 HOH 35 135 135 HOH HOH B . M 9 HOH 36 136 80 HOH HOH B . M 9 HOH 37 137 137 HOH HOH B . M 9 HOH 38 138 81 HOH HOH B . M 9 HOH 39 139 99 HOH HOH B . M 9 HOH 40 140 100 HOH HOH B . M 9 HOH 41 145 145 HOH HOH B . M 9 HOH 42 148 148 HOH HOH B . M 9 HOH 43 149 149 HOH HOH B . M 9 HOH 44 151 151 HOH HOH B . M 9 HOH 45 153 153 HOH HOH B . M 9 HOH 46 160 160 HOH HOH B . M 9 HOH 47 164 164 HOH HOH B . M 9 HOH 48 173 173 HOH HOH B . M 9 HOH 49 177 177 HOH HOH B . M 9 HOH 50 185 185 HOH HOH B . M 9 HOH 51 192 192 HOH HOH B . M 9 HOH 52 205 205 HOH HOH B . M 9 HOH 53 208 208 HOH HOH B . M 9 HOH 54 211 211 HOH HOH B . M 9 HOH 55 212 212 HOH HOH B . M 9 HOH 56 225 225 HOH HOH B . M 9 HOH 57 233 233 HOH HOH B . M 9 HOH 58 234 234 HOH HOH B . M 9 HOH 59 237 237 HOH HOH B . M 9 HOH 60 238 238 HOH HOH B . M 9 HOH 61 246 246 HOH HOH B . M 9 HOH 62 248 248 HOH HOH B . M 9 HOH 63 251 251 HOH HOH B . M 9 HOH 64 252 252 HOH HOH B . M 9 HOH 65 253 253 HOH HOH B . M 9 HOH 66 258 258 HOH HOH B . M 9 HOH 67 260 260 HOH HOH B . M 9 HOH 68 261 261 HOH HOH B . M 9 HOH 69 266 266 HOH HOH B . M 9 HOH 70 268 268 HOH HOH B . M 9 HOH 71 271 271 HOH HOH B . M 9 HOH 72 273 273 HOH HOH B . M 9 HOH 73 284 284 HOH HOH B . M 9 HOH 74 285 285 HOH HOH B . M 9 HOH 75 288 288 HOH HOH B . M 9 HOH 76 289 289 HOH HOH B . M 9 HOH 77 291 291 HOH HOH B . M 9 HOH 78 299 299 HOH HOH B . M 9 HOH 79 303 303 HOH HOH B . M 9 HOH 80 310 310 HOH HOH B . M 9 HOH 81 319 319 HOH HOH B . M 9 HOH 82 320 320 HOH HOH B . M 9 HOH 83 323 323 HOH HOH B . M 9 HOH 84 324 324 HOH HOH B . M 9 HOH 85 325 325 HOH HOH B . M 9 HOH 86 337 337 HOH HOH B . M 9 HOH 87 342 342 HOH HOH B . M 9 HOH 88 355 355 HOH HOH B . M 9 HOH 89 360 360 HOH HOH B . M 9 HOH 90 368 368 HOH HOH B . M 9 HOH 91 396 396 HOH HOH B . M 9 HOH 92 397 397 HOH HOH B . M 9 HOH 93 398 398 HOH HOH B . M 9 HOH 94 406 406 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 20 A ASN 20 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 42 A ASN 42 ? ASN 'GLYCOSYLATION SITE' 3 A ASN 165 A ASN 165 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6980 ? 1 MORE 40 ? 1 'SSA (A^2)' 19090 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-11-10 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-01 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2023-09-06 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Refinement description' 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' 'Refinement description' 5 4 'Structure model' Advisory 6 4 'Structure model' 'Atomic model' 7 4 'Structure model' 'Data collection' 8 4 'Structure model' 'Database references' 9 4 'Structure model' 'Derived calculations' 10 4 'Structure model' 'Structure summary' 11 5 'Structure model' 'Data collection' 12 5 'Structure model' 'Database references' 13 5 'Structure model' 'Refinement description' 14 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' atom_site 3 4 'Structure model' chem_comp 4 4 'Structure model' entity 5 4 'Structure model' pdbx_branch_scheme 6 4 'Structure model' pdbx_chem_comp_identifier 7 4 'Structure model' pdbx_entity_branch 8 4 'Structure model' pdbx_entity_branch_descriptor 9 4 'Structure model' pdbx_entity_branch_link 10 4 'Structure model' pdbx_entity_branch_list 11 4 'Structure model' pdbx_entity_nonpoly 12 4 'Structure model' pdbx_nonpoly_scheme 13 4 'Structure model' pdbx_struct_assembly_gen 14 4 'Structure model' pdbx_validate_symm_contact 15 4 'Structure model' struct_asym 16 4 'Structure model' struct_conn 17 4 'Structure model' struct_ref_seq_dif 18 4 'Structure model' struct_site 19 4 'Structure model' struct_site_gen 20 5 'Structure model' chem_comp 21 5 'Structure model' chem_comp_atom 22 5 'Structure model' chem_comp_bond 23 5 'Structure model' database_2 24 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_atom_site.B_iso_or_equiv' 3 4 'Structure model' '_atom_site.Cartn_x' 4 4 'Structure model' '_atom_site.Cartn_y' 5 4 'Structure model' '_atom_site.Cartn_z' 6 4 'Structure model' '_atom_site.auth_asym_id' 7 4 'Structure model' '_atom_site.auth_atom_id' 8 4 'Structure model' '_atom_site.auth_comp_id' 9 4 'Structure model' '_atom_site.auth_seq_id' 10 4 'Structure model' '_atom_site.label_asym_id' 11 4 'Structure model' '_atom_site.label_atom_id' 12 4 'Structure model' '_atom_site.label_comp_id' 13 4 'Structure model' '_atom_site.label_entity_id' 14 4 'Structure model' '_atom_site.type_symbol' 15 4 'Structure model' '_chem_comp.name' 16 4 'Structure model' '_chem_comp.type' 17 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 18 4 'Structure model' '_pdbx_validate_symm_contact.auth_asym_id_2' 19 4 'Structure model' '_pdbx_validate_symm_contact.auth_seq_id_2' 20 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 21 4 'Structure model' '_struct_conn.pdbx_role' 22 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 23 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 25 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 26 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 28 4 'Structure model' '_struct_ref_seq_dif.details' 29 5 'Structure model' '_chem_comp.pdbx_synonyms' 30 5 'Structure model' '_database_2.pdbx_DOI' 31 5 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -1.7952 -13.2389 10.5217 0.0194 0.0767 0.0172 0.0141 0.0084 -0.0163 3.2043 0.9801 1.1305 0.9496 0.8141 -0.0624 0.0095 -0.0658 0.0563 -0.3523 0.0847 -0.0346 0.0216 -0.0431 -0.1811 'X-RAY DIFFRACTION' 2 ? refined -19.5969 -35.7988 -13.2577 0.1193 0.0097 0.0992 -0.0101 0.0196 -0.0059 2.3569 4.0389 2.5567 1.4454 1.1429 1.1435 -0.0173 0.1728 -0.1556 0.0637 -0.4236 -0.2032 -0.4600 0.1984 0.0965 'X-RAY DIFFRACTION' 3 ? refined -16.3304 -13.9971 -13.9778 0.0927 0.0355 0.0324 -0.0152 -0.0250 0.0070 2.7001 0.8590 2.2422 0.3933 1.4165 0.2898 -0.2387 0.1176 0.1211 0.1412 0.2015 0.0798 -0.1987 -0.2283 0.0306 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 7 A 184 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 A 185 A 279 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 B 1 B 99 ? . . . . ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.5.0066 ? 3 XDS 'data reduction' . ? 4 XSCALE 'data scaling' . ? 5 # _pdbx_entry_details.entry_id 3GML _pdbx_entry_details.sequence_details 'ASP TO HIS CONFLICT IN UNP ENTRY P11609' _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NE2 B GLN 6 ? ? O B HOH 342 ? ? 1.75 2 1 NE2 B GLN 2 ? ? O B HOH 268 ? ? 1.95 3 1 CE B MET 99 ? ? O B HOH 355 ? ? 2.02 4 1 O2 A EDO 304 ? A O A HOH 517 ? ? 2.05 5 1 O A GLY 272 ? ? O A HOH 367 ? ? 2.18 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 CG2 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 VAL _pdbx_validate_symm_contact.auth_seq_id_1 190 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O3 _pdbx_validate_symm_contact.auth_asym_id_2 C _pdbx_validate_symm_contact.auth_comp_id_2 MAN _pdbx_validate_symm_contact.auth_seq_id_2 4 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_445 _pdbx_validate_symm_contact.dist 2.15 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CG _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 MET _pdbx_validate_rmsd_bond.auth_seq_id_1 54 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 SD _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 MET _pdbx_validate_rmsd_bond.auth_seq_id_2 54 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.639 _pdbx_validate_rmsd_bond.bond_target_value 1.807 _pdbx_validate_rmsd_bond.bond_deviation -0.168 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.026 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 108 ? ? -27.54 143.33 2 1 ALA A 111 ? ? -35.54 141.71 3 1 ASP A 166 ? ? -126.27 -59.75 4 1 GLU A 257 ? ? -80.07 40.30 5 1 TRP B 60 ? ? 78.79 -6.12 6 1 ARG B 97 ? ? 80.95 -0.78 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 1 ? A SER 1 2 1 Y 1 A GLU 2 ? A GLU 2 3 1 Y 1 A ALA 3 ? A ALA 3 4 1 Y 1 A GLN 4 ? A GLN 4 5 1 Y 1 A GLN 5 ? A GLN 5 6 1 Y 1 A LYS 6 ? A LYS 6 7 1 Y 1 A VAL 196 ? A VAL 196 8 1 Y 1 A PRO 197 ? A PRO 197 9 1 Y 1 A SER 198 ? A SER 198 10 1 Y 1 A SER 199 ? A SER 199 11 1 Y 1 A ALA 200 ? A ALA 200 12 1 Y 1 A HIS 201 ? A HIS 201 13 1 Y 1 A GLY 202 ? A GLY 202 14 1 Y 1 A HIS 282 ? A HIS 282 15 1 Y 1 A HIS 283 ? A HIS 283 16 1 Y 1 A HIS 284 ? A HIS 284 17 1 Y 1 A HIS 285 ? A HIS 285 18 1 Y 1 A HIS 286 ? A HIS 286 19 1 Y 1 A HIS 287 ? A HIS 287 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 C6Q N N N N 98 C6Q C5 C N N 99 C6Q C6 C N N 100 C6Q C2 C N N 101 C6Q C3 C N N 102 C6Q C4 C N N 103 C6Q O25 O N N 104 C6Q C25 C N N 105 C6Q C26 C N N 106 C6Q C27 C N N 107 C6Q C28 C N N 108 C6Q C29 C N N 109 C6Q C30 C N N 110 C6Q CI C Y N 111 C6Q CJ2 C Y N 112 C6Q CK2 C Y N 113 C6Q CL C Y N 114 C6Q CK1 C Y N 115 C6Q CJ1 C Y N 116 C6Q C17 C N S 117 C6Q C18 C N N 118 C6Q O18 O N N 119 C6Q C19 C N S 120 C6Q C20 C N R 121 C6Q O20 O N N 122 C6Q C21 C N S 123 C6Q O21 O N N 124 C6Q C22 C N R 125 C6Q O22 O N N 126 C6Q C23 C N R 127 C6Q C24 C N N 128 C6Q O24 O N N 129 C6Q O19 O N N 130 C6Q C16 C N S 131 C6Q O16 O N N 132 C6Q C15 C N R 133 C6Q O15 O N N 134 C6Q C14 C N N 135 C6Q C13 C N N 136 C6Q C12 C N N 137 C6Q C11 C N N 138 C6Q C10 C N N 139 C6Q C9 C N N 140 C6Q C8 C N N 141 C6Q C7 C N N 142 C6Q C1 C N N 143 C6Q HN H N N 144 C6Q H5 H N N 145 C6Q H5A H N N 146 C6Q H6 H N N 147 C6Q H6A H N N 148 C6Q H2 H N N 149 C6Q H2A H N N 150 C6Q H3 H N N 151 C6Q H3A H N N 152 C6Q H4 H N N 153 C6Q H4A H N N 154 C6Q H26 H N N 155 C6Q H26A H N N 156 C6Q H27 H N N 157 C6Q H27A H N N 158 C6Q H28 H N N 159 C6Q H28A H N N 160 C6Q H29 H N N 161 C6Q H29A H N N 162 C6Q H30 H N N 163 C6Q H30A H N N 164 C6Q HJ2 H N N 165 C6Q HK2 H N N 166 C6Q HL H N N 167 C6Q HK1 H N N 168 C6Q HJ1 H N N 169 C6Q H17 H N N 170 C6Q H18 H N N 171 C6Q H18A H N N 172 C6Q H19 H N N 173 C6Q H20 H N N 174 C6Q HO20 H N N 175 C6Q H21 H N N 176 C6Q HO21 H N N 177 C6Q H22 H N N 178 C6Q HO22 H N N 179 C6Q H23 H N N 180 C6Q H24 H N N 181 C6Q H24A H N N 182 C6Q HO24 H N N 183 C6Q H16 H N N 184 C6Q HO16 H N N 185 C6Q H15 H N N 186 C6Q HO15 H N N 187 C6Q H14 H N N 188 C6Q H14A H N N 189 C6Q H13 H N N 190 C6Q H13A H N N 191 C6Q H12 H N N 192 C6Q H12A H N N 193 C6Q H11 H N N 194 C6Q H11A H N N 195 C6Q H10 H N N 196 C6Q H10A H N N 197 C6Q H9 H N N 198 C6Q H9A H N N 199 C6Q H8 H N N 200 C6Q H8A H N N 201 C6Q H7 H N N 202 C6Q H7A H N N 203 C6Q H1 H N N 204 C6Q H1A H N N 205 C6Q H1B H N N 206 CYS N N N N 207 CYS CA C N R 208 CYS C C N N 209 CYS O O N N 210 CYS CB C N N 211 CYS SG S N N 212 CYS OXT O N N 213 CYS H H N N 214 CYS H2 H N N 215 CYS HA H N N 216 CYS HB2 H N N 217 CYS HB3 H N N 218 CYS HG H N N 219 CYS HXT H N N 220 EDO C1 C N N 221 EDO O1 O N N 222 EDO C2 C N N 223 EDO O2 O N N 224 EDO H11 H N N 225 EDO H12 H N N 226 EDO HO1 H N N 227 EDO H21 H N N 228 EDO H22 H N N 229 EDO HO2 H N N 230 FUC C1 C N R 231 FUC C2 C N S 232 FUC C3 C N R 233 FUC C4 C N S 234 FUC C5 C N S 235 FUC C6 C N N 236 FUC O1 O N N 237 FUC O2 O N N 238 FUC O3 O N N 239 FUC O4 O N N 240 FUC O5 O N N 241 FUC H1 H N N 242 FUC H2 H N N 243 FUC H3 H N N 244 FUC H4 H N N 245 FUC H5 H N N 246 FUC H61 H N N 247 FUC H62 H N N 248 FUC H63 H N N 249 FUC HO1 H N N 250 FUC HO2 H N N 251 FUC HO3 H N N 252 FUC HO4 H N N 253 GLN N N N N 254 GLN CA C N S 255 GLN C C N N 256 GLN O O N N 257 GLN CB C N N 258 GLN CG C N N 259 GLN CD C N N 260 GLN OE1 O N N 261 GLN NE2 N N N 262 GLN OXT O N N 263 GLN H H N N 264 GLN H2 H N N 265 GLN HA H N N 266 GLN HB2 H N N 267 GLN HB3 H N N 268 GLN HG2 H N N 269 GLN HG3 H N N 270 GLN HE21 H N N 271 GLN HE22 H N N 272 GLN HXT H N N 273 GLU N N N N 274 GLU CA C N S 275 GLU C C N N 276 GLU O O N N 277 GLU CB C N N 278 GLU CG C N N 279 GLU CD C N N 280 GLU OE1 O N N 281 GLU OE2 O N N 282 GLU OXT O N N 283 GLU H H N N 284 GLU H2 H N N 285 GLU HA H N N 286 GLU HB2 H N N 287 GLU HB3 H N N 288 GLU HG2 H N N 289 GLU HG3 H N N 290 GLU HE2 H N N 291 GLU HXT H N N 292 GLY N N N N 293 GLY CA C N N 294 GLY C C N N 295 GLY O O N N 296 GLY OXT O N N 297 GLY H H N N 298 GLY H2 H N N 299 GLY HA2 H N N 300 GLY HA3 H N N 301 GLY HXT H N N 302 HIS N N N N 303 HIS CA C N S 304 HIS C C N N 305 HIS O O N N 306 HIS CB C N N 307 HIS CG C Y N 308 HIS ND1 N Y N 309 HIS CD2 C Y N 310 HIS CE1 C Y N 311 HIS NE2 N Y N 312 HIS OXT O N N 313 HIS H H N N 314 HIS H2 H N N 315 HIS HA H N N 316 HIS HB2 H N N 317 HIS HB3 H N N 318 HIS HD1 H N N 319 HIS HD2 H N N 320 HIS HE1 H N N 321 HIS HE2 H N N 322 HIS HXT H N N 323 HOH O O N N 324 HOH H1 H N N 325 HOH H2 H N N 326 ILE N N N N 327 ILE CA C N S 328 ILE C C N N 329 ILE O O N N 330 ILE CB C N S 331 ILE CG1 C N N 332 ILE CG2 C N N 333 ILE CD1 C N N 334 ILE OXT O N N 335 ILE H H N N 336 ILE H2 H N N 337 ILE HA H N N 338 ILE HB H N N 339 ILE HG12 H N N 340 ILE HG13 H N N 341 ILE HG21 H N N 342 ILE HG22 H N N 343 ILE HG23 H N N 344 ILE HD11 H N N 345 ILE HD12 H N N 346 ILE HD13 H N N 347 ILE HXT H N N 348 LEU N N N N 349 LEU CA C N S 350 LEU C C N N 351 LEU O O N N 352 LEU CB C N N 353 LEU CG C N N 354 LEU CD1 C N N 355 LEU CD2 C N N 356 LEU OXT O N N 357 LEU H H N N 358 LEU H2 H N N 359 LEU HA H N N 360 LEU HB2 H N N 361 LEU HB3 H N N 362 LEU HG H N N 363 LEU HD11 H N N 364 LEU HD12 H N N 365 LEU HD13 H N N 366 LEU HD21 H N N 367 LEU HD22 H N N 368 LEU HD23 H N N 369 LEU HXT H N N 370 LYS N N N N 371 LYS CA C N S 372 LYS C C N N 373 LYS O O N N 374 LYS CB C N N 375 LYS CG C N N 376 LYS CD C N N 377 LYS CE C N N 378 LYS NZ N N N 379 LYS OXT O N N 380 LYS H H N N 381 LYS H2 H N N 382 LYS HA H N N 383 LYS HB2 H N N 384 LYS HB3 H N N 385 LYS HG2 H N N 386 LYS HG3 H N N 387 LYS HD2 H N N 388 LYS HD3 H N N 389 LYS HE2 H N N 390 LYS HE3 H N N 391 LYS HZ1 H N N 392 LYS HZ2 H N N 393 LYS HZ3 H N N 394 LYS HXT H N N 395 MAN C1 C N S 396 MAN C2 C N S 397 MAN C3 C N S 398 MAN C4 C N S 399 MAN C5 C N R 400 MAN C6 C N N 401 MAN O1 O N N 402 MAN O2 O N N 403 MAN O3 O N N 404 MAN O4 O N N 405 MAN O5 O N N 406 MAN O6 O N N 407 MAN H1 H N N 408 MAN H2 H N N 409 MAN H3 H N N 410 MAN H4 H N N 411 MAN H5 H N N 412 MAN H61 H N N 413 MAN H62 H N N 414 MAN HO1 H N N 415 MAN HO2 H N N 416 MAN HO3 H N N 417 MAN HO4 H N N 418 MAN HO6 H N N 419 MET N N N N 420 MET CA C N S 421 MET C C N N 422 MET O O N N 423 MET CB C N N 424 MET CG C N N 425 MET SD S N N 426 MET CE C N N 427 MET OXT O N N 428 MET H H N N 429 MET H2 H N N 430 MET HA H N N 431 MET HB2 H N N 432 MET HB3 H N N 433 MET HG2 H N N 434 MET HG3 H N N 435 MET HE1 H N N 436 MET HE2 H N N 437 MET HE3 H N N 438 MET HXT H N N 439 NAG C1 C N R 440 NAG C2 C N R 441 NAG C3 C N R 442 NAG C4 C N S 443 NAG C5 C N R 444 NAG C6 C N N 445 NAG C7 C N N 446 NAG C8 C N N 447 NAG N2 N N N 448 NAG O1 O N N 449 NAG O3 O N N 450 NAG O4 O N N 451 NAG O5 O N N 452 NAG O6 O N N 453 NAG O7 O N N 454 NAG H1 H N N 455 NAG H2 H N N 456 NAG H3 H N N 457 NAG H4 H N N 458 NAG H5 H N N 459 NAG H61 H N N 460 NAG H62 H N N 461 NAG H81 H N N 462 NAG H82 H N N 463 NAG H83 H N N 464 NAG HN2 H N N 465 NAG HO1 H N N 466 NAG HO3 H N N 467 NAG HO4 H N N 468 NAG HO6 H N N 469 PHE N N N N 470 PHE CA C N S 471 PHE C C N N 472 PHE O O N N 473 PHE CB C N N 474 PHE CG C Y N 475 PHE CD1 C Y N 476 PHE CD2 C Y N 477 PHE CE1 C Y N 478 PHE CE2 C Y N 479 PHE CZ C Y N 480 PHE OXT O N N 481 PHE H H N N 482 PHE H2 H N N 483 PHE HA H N N 484 PHE HB2 H N N 485 PHE HB3 H N N 486 PHE HD1 H N N 487 PHE HD2 H N N 488 PHE HE1 H N N 489 PHE HE2 H N N 490 PHE HZ H N N 491 PHE HXT H N N 492 PLM C1 C N N 493 PLM O1 O N N 494 PLM O2 O N N 495 PLM C2 C N N 496 PLM C3 C N N 497 PLM C4 C N N 498 PLM C5 C N N 499 PLM C6 C N N 500 PLM C7 C N N 501 PLM C8 C N N 502 PLM C9 C N N 503 PLM CA C N N 504 PLM CB C N N 505 PLM CC C N N 506 PLM CD C N N 507 PLM CE C N N 508 PLM CF C N N 509 PLM CG C N N 510 PLM H H N N 511 PLM H21 H N N 512 PLM H22 H N N 513 PLM H31 H N N 514 PLM H32 H N N 515 PLM H41 H N N 516 PLM H42 H N N 517 PLM H51 H N N 518 PLM H52 H N N 519 PLM H61 H N N 520 PLM H62 H N N 521 PLM H71 H N N 522 PLM H72 H N N 523 PLM H81 H N N 524 PLM H82 H N N 525 PLM H91 H N N 526 PLM H92 H N N 527 PLM HA1 H N N 528 PLM HA2 H N N 529 PLM HB1 H N N 530 PLM HB2 H N N 531 PLM HC1 H N N 532 PLM HC2 H N N 533 PLM HD1 H N N 534 PLM HD2 H N N 535 PLM HE1 H N N 536 PLM HE2 H N N 537 PLM HF1 H N N 538 PLM HF2 H N N 539 PLM HG1 H N N 540 PLM HG2 H N N 541 PLM HG3 H N N 542 PRO N N N N 543 PRO CA C N S 544 PRO C C N N 545 PRO O O N N 546 PRO CB C N N 547 PRO CG C N N 548 PRO CD C N N 549 PRO OXT O N N 550 PRO H H N N 551 PRO HA H N N 552 PRO HB2 H N N 553 PRO HB3 H N N 554 PRO HG2 H N N 555 PRO HG3 H N N 556 PRO HD2 H N N 557 PRO HD3 H N N 558 PRO HXT H N N 559 SER N N N N 560 SER CA C N S 561 SER C C N N 562 SER O O N N 563 SER CB C N N 564 SER OG O N N 565 SER OXT O N N 566 SER H H N N 567 SER H2 H N N 568 SER HA H N N 569 SER HB2 H N N 570 SER HB3 H N N 571 SER HG H N N 572 SER HXT H N N 573 THR N N N N 574 THR CA C N S 575 THR C C N N 576 THR O O N N 577 THR CB C N R 578 THR OG1 O N N 579 THR CG2 C N N 580 THR OXT O N N 581 THR H H N N 582 THR H2 H N N 583 THR HA H N N 584 THR HB H N N 585 THR HG1 H N N 586 THR HG21 H N N 587 THR HG22 H N N 588 THR HG23 H N N 589 THR HXT H N N 590 TRP N N N N 591 TRP CA C N S 592 TRP C C N N 593 TRP O O N N 594 TRP CB C N N 595 TRP CG C Y N 596 TRP CD1 C Y N 597 TRP CD2 C Y N 598 TRP NE1 N Y N 599 TRP CE2 C Y N 600 TRP CE3 C Y N 601 TRP CZ2 C Y N 602 TRP CZ3 C Y N 603 TRP CH2 C Y N 604 TRP OXT O N N 605 TRP H H N N 606 TRP H2 H N N 607 TRP HA H N N 608 TRP HB2 H N N 609 TRP HB3 H N N 610 TRP HD1 H N N 611 TRP HE1 H N N 612 TRP HE3 H N N 613 TRP HZ2 H N N 614 TRP HZ3 H N N 615 TRP HH2 H N N 616 TRP HXT H N N 617 TYR N N N N 618 TYR CA C N S 619 TYR C C N N 620 TYR O O N N 621 TYR CB C N N 622 TYR CG C Y N 623 TYR CD1 C Y N 624 TYR CD2 C Y N 625 TYR CE1 C Y N 626 TYR CE2 C Y N 627 TYR CZ C Y N 628 TYR OH O N N 629 TYR OXT O N N 630 TYR H H N N 631 TYR H2 H N N 632 TYR HA H N N 633 TYR HB2 H N N 634 TYR HB3 H N N 635 TYR HD1 H N N 636 TYR HD2 H N N 637 TYR HE1 H N N 638 TYR HE2 H N N 639 TYR HH H N N 640 TYR HXT H N N 641 VAL N N N N 642 VAL CA C N S 643 VAL C C N N 644 VAL O O N N 645 VAL CB C N N 646 VAL CG1 C N N 647 VAL CG2 C N N 648 VAL OXT O N N 649 VAL H H N N 650 VAL H2 H N N 651 VAL HA H N N 652 VAL HB H N N 653 VAL HG11 H N N 654 VAL HG12 H N N 655 VAL HG13 H N N 656 VAL HG21 H N N 657 VAL HG22 H N N 658 VAL HG23 H N N 659 VAL HXT H N N 660 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 C6Q N C25 sing N N 94 C6Q N C17 sing N N 95 C6Q C5 C6 sing N N 96 C6Q C5 C4 sing N N 97 C6Q C6 C7 sing N N 98 C6Q C2 C3 sing N N 99 C6Q C2 C1 sing N N 100 C6Q C3 C4 sing N N 101 C6Q O25 C25 doub N N 102 C6Q C25 C26 sing N N 103 C6Q C26 C27 sing N N 104 C6Q C27 C28 sing N N 105 C6Q C28 C29 sing N N 106 C6Q C29 C30 sing N N 107 C6Q C30 CI sing N N 108 C6Q CI CJ2 doub Y N 109 C6Q CI CJ1 sing Y N 110 C6Q CJ2 CK2 sing Y N 111 C6Q CK2 CL doub Y N 112 C6Q CL CK1 sing Y N 113 C6Q CK1 CJ1 doub Y N 114 C6Q C17 C18 sing N N 115 C6Q C17 C16 sing N N 116 C6Q C18 O18 sing N N 117 C6Q O18 C19 sing N N 118 C6Q C19 C20 sing N N 119 C6Q C19 O19 sing N N 120 C6Q C20 O20 sing N N 121 C6Q C20 C21 sing N N 122 C6Q C21 O21 sing N N 123 C6Q C21 C22 sing N N 124 C6Q C22 O22 sing N N 125 C6Q C22 C23 sing N N 126 C6Q C23 C24 sing N N 127 C6Q C23 O19 sing N N 128 C6Q C24 O24 sing N N 129 C6Q C16 O16 sing N N 130 C6Q C16 C15 sing N N 131 C6Q C15 O15 sing N N 132 C6Q C15 C14 sing N N 133 C6Q C14 C13 sing N N 134 C6Q C13 C12 sing N N 135 C6Q C12 C11 sing N N 136 C6Q C11 C10 sing N N 137 C6Q C10 C9 sing N N 138 C6Q C9 C8 sing N N 139 C6Q C8 C7 sing N N 140 C6Q N HN sing N N 141 C6Q C5 H5 sing N N 142 C6Q C5 H5A sing N N 143 C6Q C6 H6 sing N N 144 C6Q C6 H6A sing N N 145 C6Q C2 H2 sing N N 146 C6Q C2 H2A sing N N 147 C6Q C3 H3 sing N N 148 C6Q C3 H3A sing N N 149 C6Q C4 H4 sing N N 150 C6Q C4 H4A sing N N 151 C6Q C26 H26 sing N N 152 C6Q C26 H26A sing N N 153 C6Q C27 H27 sing N N 154 C6Q C27 H27A sing N N 155 C6Q C28 H28 sing N N 156 C6Q C28 H28A sing N N 157 C6Q C29 H29 sing N N 158 C6Q C29 H29A sing N N 159 C6Q C30 H30 sing N N 160 C6Q C30 H30A sing N N 161 C6Q CJ2 HJ2 sing N N 162 C6Q CK2 HK2 sing N N 163 C6Q CL HL sing N N 164 C6Q CK1 HK1 sing N N 165 C6Q CJ1 HJ1 sing N N 166 C6Q C17 H17 sing N N 167 C6Q C18 H18 sing N N 168 C6Q C18 H18A sing N N 169 C6Q C19 H19 sing N N 170 C6Q C20 H20 sing N N 171 C6Q O20 HO20 sing N N 172 C6Q C21 H21 sing N N 173 C6Q O21 HO21 sing N N 174 C6Q C22 H22 sing N N 175 C6Q O22 HO22 sing N N 176 C6Q C23 H23 sing N N 177 C6Q C24 H24 sing N N 178 C6Q C24 H24A sing N N 179 C6Q O24 HO24 sing N N 180 C6Q C16 H16 sing N N 181 C6Q O16 HO16 sing N N 182 C6Q C15 H15 sing N N 183 C6Q O15 HO15 sing N N 184 C6Q C14 H14 sing N N 185 C6Q C14 H14A sing N N 186 C6Q C13 H13 sing N N 187 C6Q C13 H13A sing N N 188 C6Q C12 H12 sing N N 189 C6Q C12 H12A sing N N 190 C6Q C11 H11 sing N N 191 C6Q C11 H11A sing N N 192 C6Q C10 H10 sing N N 193 C6Q C10 H10A sing N N 194 C6Q C9 H9 sing N N 195 C6Q C9 H9A sing N N 196 C6Q C8 H8 sing N N 197 C6Q C8 H8A sing N N 198 C6Q C7 H7 sing N N 199 C6Q C7 H7A sing N N 200 C6Q C1 H1 sing N N 201 C6Q C1 H1A sing N N 202 C6Q C1 H1B sing N N 203 CYS N CA sing N N 204 CYS N H sing N N 205 CYS N H2 sing N N 206 CYS CA C sing N N 207 CYS CA CB sing N N 208 CYS CA HA sing N N 209 CYS C O doub N N 210 CYS C OXT sing N N 211 CYS CB SG sing N N 212 CYS CB HB2 sing N N 213 CYS CB HB3 sing N N 214 CYS SG HG sing N N 215 CYS OXT HXT sing N N 216 EDO C1 O1 sing N N 217 EDO C1 C2 sing N N 218 EDO C1 H11 sing N N 219 EDO C1 H12 sing N N 220 EDO O1 HO1 sing N N 221 EDO C2 O2 sing N N 222 EDO C2 H21 sing N N 223 EDO C2 H22 sing N N 224 EDO O2 HO2 sing N N 225 FUC C1 C2 sing N N 226 FUC C1 O1 sing N N 227 FUC C1 O5 sing N N 228 FUC C1 H1 sing N N 229 FUC C2 C3 sing N N 230 FUC C2 O2 sing N N 231 FUC C2 H2 sing N N 232 FUC C3 C4 sing N N 233 FUC C3 O3 sing N N 234 FUC C3 H3 sing N N 235 FUC C4 C5 sing N N 236 FUC C4 O4 sing N N 237 FUC C4 H4 sing N N 238 FUC C5 C6 sing N N 239 FUC C5 O5 sing N N 240 FUC C5 H5 sing N N 241 FUC C6 H61 sing N N 242 FUC C6 H62 sing N N 243 FUC C6 H63 sing N N 244 FUC O1 HO1 sing N N 245 FUC O2 HO2 sing N N 246 FUC O3 HO3 sing N N 247 FUC O4 HO4 sing N N 248 GLN N CA sing N N 249 GLN N H sing N N 250 GLN N H2 sing N N 251 GLN CA C sing N N 252 GLN CA CB sing N N 253 GLN CA HA sing N N 254 GLN C O doub N N 255 GLN C OXT sing N N 256 GLN CB CG sing N N 257 GLN CB HB2 sing N N 258 GLN CB HB3 sing N N 259 GLN CG CD sing N N 260 GLN CG HG2 sing N N 261 GLN CG HG3 sing N N 262 GLN CD OE1 doub N N 263 GLN CD NE2 sing N N 264 GLN NE2 HE21 sing N N 265 GLN NE2 HE22 sing N N 266 GLN OXT HXT sing N N 267 GLU N CA sing N N 268 GLU N H sing N N 269 GLU N H2 sing N N 270 GLU CA C sing N N 271 GLU CA CB sing N N 272 GLU CA HA sing N N 273 GLU C O doub N N 274 GLU C OXT sing N N 275 GLU CB CG sing N N 276 GLU CB HB2 sing N N 277 GLU CB HB3 sing N N 278 GLU CG CD sing N N 279 GLU CG HG2 sing N N 280 GLU CG HG3 sing N N 281 GLU CD OE1 doub N N 282 GLU CD OE2 sing N N 283 GLU OE2 HE2 sing N N 284 GLU OXT HXT sing N N 285 GLY N CA sing N N 286 GLY N H sing N N 287 GLY N H2 sing N N 288 GLY CA C sing N N 289 GLY CA HA2 sing N N 290 GLY CA HA3 sing N N 291 GLY C O doub N N 292 GLY C OXT sing N N 293 GLY OXT HXT sing N N 294 HIS N CA sing N N 295 HIS N H sing N N 296 HIS N H2 sing N N 297 HIS CA C sing N N 298 HIS CA CB sing N N 299 HIS CA HA sing N N 300 HIS C O doub N N 301 HIS C OXT sing N N 302 HIS CB CG sing N N 303 HIS CB HB2 sing N N 304 HIS CB HB3 sing N N 305 HIS CG ND1 sing Y N 306 HIS CG CD2 doub Y N 307 HIS ND1 CE1 doub Y N 308 HIS ND1 HD1 sing N N 309 HIS CD2 NE2 sing Y N 310 HIS CD2 HD2 sing N N 311 HIS CE1 NE2 sing Y N 312 HIS CE1 HE1 sing N N 313 HIS NE2 HE2 sing N N 314 HIS OXT HXT sing N N 315 HOH O H1 sing N N 316 HOH O H2 sing N N 317 ILE N CA sing N N 318 ILE N H sing N N 319 ILE N H2 sing N N 320 ILE CA C sing N N 321 ILE CA CB sing N N 322 ILE CA HA sing N N 323 ILE C O doub N N 324 ILE C OXT sing N N 325 ILE CB CG1 sing N N 326 ILE CB CG2 sing N N 327 ILE CB HB sing N N 328 ILE CG1 CD1 sing N N 329 ILE CG1 HG12 sing N N 330 ILE CG1 HG13 sing N N 331 ILE CG2 HG21 sing N N 332 ILE CG2 HG22 sing N N 333 ILE CG2 HG23 sing N N 334 ILE CD1 HD11 sing N N 335 ILE CD1 HD12 sing N N 336 ILE CD1 HD13 sing N N 337 ILE OXT HXT sing N N 338 LEU N CA sing N N 339 LEU N H sing N N 340 LEU N H2 sing N N 341 LEU CA C sing N N 342 LEU CA CB sing N N 343 LEU CA HA sing N N 344 LEU C O doub N N 345 LEU C OXT sing N N 346 LEU CB CG sing N N 347 LEU CB HB2 sing N N 348 LEU CB HB3 sing N N 349 LEU CG CD1 sing N N 350 LEU CG CD2 sing N N 351 LEU CG HG sing N N 352 LEU CD1 HD11 sing N N 353 LEU CD1 HD12 sing N N 354 LEU CD1 HD13 sing N N 355 LEU CD2 HD21 sing N N 356 LEU CD2 HD22 sing N N 357 LEU CD2 HD23 sing N N 358 LEU OXT HXT sing N N 359 LYS N CA sing N N 360 LYS N H sing N N 361 LYS N H2 sing N N 362 LYS CA C sing N N 363 LYS CA CB sing N N 364 LYS CA HA sing N N 365 LYS C O doub N N 366 LYS C OXT sing N N 367 LYS CB CG sing N N 368 LYS CB HB2 sing N N 369 LYS CB HB3 sing N N 370 LYS CG CD sing N N 371 LYS CG HG2 sing N N 372 LYS CG HG3 sing N N 373 LYS CD CE sing N N 374 LYS CD HD2 sing N N 375 LYS CD HD3 sing N N 376 LYS CE NZ sing N N 377 LYS CE HE2 sing N N 378 LYS CE HE3 sing N N 379 LYS NZ HZ1 sing N N 380 LYS NZ HZ2 sing N N 381 LYS NZ HZ3 sing N N 382 LYS OXT HXT sing N N 383 MAN C1 C2 sing N N 384 MAN C1 O1 sing N N 385 MAN C1 O5 sing N N 386 MAN C1 H1 sing N N 387 MAN C2 C3 sing N N 388 MAN C2 O2 sing N N 389 MAN C2 H2 sing N N 390 MAN C3 C4 sing N N 391 MAN C3 O3 sing N N 392 MAN C3 H3 sing N N 393 MAN C4 C5 sing N N 394 MAN C4 O4 sing N N 395 MAN C4 H4 sing N N 396 MAN C5 C6 sing N N 397 MAN C5 O5 sing N N 398 MAN C5 H5 sing N N 399 MAN C6 O6 sing N N 400 MAN C6 H61 sing N N 401 MAN C6 H62 sing N N 402 MAN O1 HO1 sing N N 403 MAN O2 HO2 sing N N 404 MAN O3 HO3 sing N N 405 MAN O4 HO4 sing N N 406 MAN O6 HO6 sing N N 407 MET N CA sing N N 408 MET N H sing N N 409 MET N H2 sing N N 410 MET CA C sing N N 411 MET CA CB sing N N 412 MET CA HA sing N N 413 MET C O doub N N 414 MET C OXT sing N N 415 MET CB CG sing N N 416 MET CB HB2 sing N N 417 MET CB HB3 sing N N 418 MET CG SD sing N N 419 MET CG HG2 sing N N 420 MET CG HG3 sing N N 421 MET SD CE sing N N 422 MET CE HE1 sing N N 423 MET CE HE2 sing N N 424 MET CE HE3 sing N N 425 MET OXT HXT sing N N 426 NAG C1 C2 sing N N 427 NAG C1 O1 sing N N 428 NAG C1 O5 sing N N 429 NAG C1 H1 sing N N 430 NAG C2 C3 sing N N 431 NAG C2 N2 sing N N 432 NAG C2 H2 sing N N 433 NAG C3 C4 sing N N 434 NAG C3 O3 sing N N 435 NAG C3 H3 sing N N 436 NAG C4 C5 sing N N 437 NAG C4 O4 sing N N 438 NAG C4 H4 sing N N 439 NAG C5 C6 sing N N 440 NAG C5 O5 sing N N 441 NAG C5 H5 sing N N 442 NAG C6 O6 sing N N 443 NAG C6 H61 sing N N 444 NAG C6 H62 sing N N 445 NAG C7 C8 sing N N 446 NAG C7 N2 sing N N 447 NAG C7 O7 doub N N 448 NAG C8 H81 sing N N 449 NAG C8 H82 sing N N 450 NAG C8 H83 sing N N 451 NAG N2 HN2 sing N N 452 NAG O1 HO1 sing N N 453 NAG O3 HO3 sing N N 454 NAG O4 HO4 sing N N 455 NAG O6 HO6 sing N N 456 PHE N CA sing N N 457 PHE N H sing N N 458 PHE N H2 sing N N 459 PHE CA C sing N N 460 PHE CA CB sing N N 461 PHE CA HA sing N N 462 PHE C O doub N N 463 PHE C OXT sing N N 464 PHE CB CG sing N N 465 PHE CB HB2 sing N N 466 PHE CB HB3 sing N N 467 PHE CG CD1 doub Y N 468 PHE CG CD2 sing Y N 469 PHE CD1 CE1 sing Y N 470 PHE CD1 HD1 sing N N 471 PHE CD2 CE2 doub Y N 472 PHE CD2 HD2 sing N N 473 PHE CE1 CZ doub Y N 474 PHE CE1 HE1 sing N N 475 PHE CE2 CZ sing Y N 476 PHE CE2 HE2 sing N N 477 PHE CZ HZ sing N N 478 PHE OXT HXT sing N N 479 PLM C1 O1 sing N N 480 PLM C1 O2 doub N N 481 PLM C1 C2 sing N N 482 PLM O1 H sing N N 483 PLM C2 C3 sing N N 484 PLM C2 H21 sing N N 485 PLM C2 H22 sing N N 486 PLM C3 C4 sing N N 487 PLM C3 H31 sing N N 488 PLM C3 H32 sing N N 489 PLM C4 C5 sing N N 490 PLM C4 H41 sing N N 491 PLM C4 H42 sing N N 492 PLM C5 C6 sing N N 493 PLM C5 H51 sing N N 494 PLM C5 H52 sing N N 495 PLM C6 C7 sing N N 496 PLM C6 H61 sing N N 497 PLM C6 H62 sing N N 498 PLM C7 C8 sing N N 499 PLM C7 H71 sing N N 500 PLM C7 H72 sing N N 501 PLM C8 C9 sing N N 502 PLM C8 H81 sing N N 503 PLM C8 H82 sing N N 504 PLM C9 CA sing N N 505 PLM C9 H91 sing N N 506 PLM C9 H92 sing N N 507 PLM CA CB sing N N 508 PLM CA HA1 sing N N 509 PLM CA HA2 sing N N 510 PLM CB CC sing N N 511 PLM CB HB1 sing N N 512 PLM CB HB2 sing N N 513 PLM CC CD sing N N 514 PLM CC HC1 sing N N 515 PLM CC HC2 sing N N 516 PLM CD CE sing N N 517 PLM CD HD1 sing N N 518 PLM CD HD2 sing N N 519 PLM CE CF sing N N 520 PLM CE HE1 sing N N 521 PLM CE HE2 sing N N 522 PLM CF CG sing N N 523 PLM CF HF1 sing N N 524 PLM CF HF2 sing N N 525 PLM CG HG1 sing N N 526 PLM CG HG2 sing N N 527 PLM CG HG3 sing N N 528 PRO N CA sing N N 529 PRO N CD sing N N 530 PRO N H sing N N 531 PRO CA C sing N N 532 PRO CA CB sing N N 533 PRO CA HA sing N N 534 PRO C O doub N N 535 PRO C OXT sing N N 536 PRO CB CG sing N N 537 PRO CB HB2 sing N N 538 PRO CB HB3 sing N N 539 PRO CG CD sing N N 540 PRO CG HG2 sing N N 541 PRO CG HG3 sing N N 542 PRO CD HD2 sing N N 543 PRO CD HD3 sing N N 544 PRO OXT HXT sing N N 545 SER N CA sing N N 546 SER N H sing N N 547 SER N H2 sing N N 548 SER CA C sing N N 549 SER CA CB sing N N 550 SER CA HA sing N N 551 SER C O doub N N 552 SER C OXT sing N N 553 SER CB OG sing N N 554 SER CB HB2 sing N N 555 SER CB HB3 sing N N 556 SER OG HG sing N N 557 SER OXT HXT sing N N 558 THR N CA sing N N 559 THR N H sing N N 560 THR N H2 sing N N 561 THR CA C sing N N 562 THR CA CB sing N N 563 THR CA HA sing N N 564 THR C O doub N N 565 THR C OXT sing N N 566 THR CB OG1 sing N N 567 THR CB CG2 sing N N 568 THR CB HB sing N N 569 THR OG1 HG1 sing N N 570 THR CG2 HG21 sing N N 571 THR CG2 HG22 sing N N 572 THR CG2 HG23 sing N N 573 THR OXT HXT sing N N 574 TRP N CA sing N N 575 TRP N H sing N N 576 TRP N H2 sing N N 577 TRP CA C sing N N 578 TRP CA CB sing N N 579 TRP CA HA sing N N 580 TRP C O doub N N 581 TRP C OXT sing N N 582 TRP CB CG sing N N 583 TRP CB HB2 sing N N 584 TRP CB HB3 sing N N 585 TRP CG CD1 doub Y N 586 TRP CG CD2 sing Y N 587 TRP CD1 NE1 sing Y N 588 TRP CD1 HD1 sing N N 589 TRP CD2 CE2 doub Y N 590 TRP CD2 CE3 sing Y N 591 TRP NE1 CE2 sing Y N 592 TRP NE1 HE1 sing N N 593 TRP CE2 CZ2 sing Y N 594 TRP CE3 CZ3 doub Y N 595 TRP CE3 HE3 sing N N 596 TRP CZ2 CH2 doub Y N 597 TRP CZ2 HZ2 sing N N 598 TRP CZ3 CH2 sing Y N 599 TRP CZ3 HZ3 sing N N 600 TRP CH2 HH2 sing N N 601 TRP OXT HXT sing N N 602 TYR N CA sing N N 603 TYR N H sing N N 604 TYR N H2 sing N N 605 TYR CA C sing N N 606 TYR CA CB sing N N 607 TYR CA HA sing N N 608 TYR C O doub N N 609 TYR C OXT sing N N 610 TYR CB CG sing N N 611 TYR CB HB2 sing N N 612 TYR CB HB3 sing N N 613 TYR CG CD1 doub Y N 614 TYR CG CD2 sing Y N 615 TYR CD1 CE1 sing Y N 616 TYR CD1 HD1 sing N N 617 TYR CD2 CE2 doub Y N 618 TYR CD2 HD2 sing N N 619 TYR CE1 CZ doub Y N 620 TYR CE1 HE1 sing N N 621 TYR CE2 CZ sing Y N 622 TYR CE2 HE2 sing N N 623 TYR CZ OH sing N N 624 TYR OH HH sing N N 625 TYR OXT HXT sing N N 626 VAL N CA sing N N 627 VAL N H sing N N 628 VAL N H2 sing N N 629 VAL CA C sing N N 630 VAL CA CB sing N N 631 VAL CA HA sing N N 632 VAL C O doub N N 633 VAL C OXT sing N N 634 VAL CB CG1 sing N N 635 VAL CB CG2 sing N N 636 VAL CB HB sing N N 637 VAL CG1 HG11 sing N N 638 VAL CG1 HG12 sing N N 639 VAL CG1 HG13 sing N N 640 VAL CG2 HG21 sing N N 641 VAL CG2 HG22 sing N N 642 VAL CG2 HG23 sing N N 643 VAL OXT HXT sing N N 644 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 3 NAG 1 C NAG 1 S NAG 11 n C 3 NAG 2 C NAG 2 S NAG 12 n C 3 BMA 3 C BMA 3 S BMA 13 n C 3 MAN 4 C MAN 4 S MAN 14 n C 3 MAN 5 C MAN 5 S MAN 15 n D 4 NAG 1 D NAG 1 S NAG 21 n D 4 NAG 2 D NAG 2 S NAG 22 n D 4 BMA 3 D BMA 3 S BMA 23 n D 4 MAN 4 D MAN 4 S MAN 25 n D 4 MAN 5 D MAN 5 S MAN 24 n D 4 FUC 6 D FUC 6 S FUC 26 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 3 oligosaccharide 4 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 DManpa1-2DManpa1-3DManpb1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 3 'WURCS=2.0/3,5,4/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3-3/a4-b1_b4-c1_c3-d1_d2-e1' WURCS PDB2Glycan 1.1.0 3 3 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{[(2+1)][a-D-Manp]{}}}}}}' LINUCS PDB-CARE ? 4 4 'DManpa1-3[DManpa1-6]DManpb1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 5 4 'WURCS=2.0/4,6,5/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a1221m-1a_1-5]/1-1-2-3-3-4/a4-b1_a6-f1_b4-c1_c3-d1_c6-e1' WURCS PDB2Glycan 1.1.0 6 4 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}[(6+1)][a-D-Manp]{}}}[(6+1)][a-L-Fucp]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 3 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 3 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 3 4 MAN C1 O1 3 BMA O3 HO3 sing ? 4 3 5 MAN C1 O1 4 MAN O2 HO2 sing ? 5 4 2 NAG C1 O1 1 NAG O4 HO4 sing ? 6 4 3 BMA C1 O1 2 NAG O4 HO4 sing ? 7 4 4 MAN C1 O1 3 BMA O3 HO3 sing ? 8 4 5 MAN C1 O1 3 BMA O6 HO6 sing ? 9 4 6 FUC C1 O1 1 NAG O6 HO6 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 NAG 1 n 3 NAG 2 n 3 BMA 3 n 3 MAN 4 n 3 MAN 5 n 4 NAG 1 n 4 NAG 2 n 4 BMA 3 n 4 MAN 4 n 4 MAN 5 n 4 FUC 6 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 6 'N-{(1S,2S,3R)-1-[(alpha-D-galactopyranosyloxy)methyl]-2,3-dihydroxyheptadecyl}-6-phenylhexanamide' C6Q 7 'PALMITIC ACID' PLM 8 1,2-ETHANEDIOL EDO 9 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2AKR _pdbx_initial_refinement_model.details 'PDB entry 2AKR' #