HEADER    HYDROLASE                               17-MAR-09   3GNO              
TITLE     CRYSTAL STRUCTURE OF A RICE OS3BGLU6 BETA-GLUCOSIDASE                 
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: OS03G0212800 PROTEIN;                                      
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: UNP RESIDUES 38-521;                                       
COMPND   5 SYNONYM: BETA-GLUCOSIDASE, GLYCOSYL HYDROLASE FAMILY 1 PROTEIN,      
COMPND   6 EXPRESSED;                                                           
COMPND   7 EC: 3.2.1.21;                                                        
COMPND   8 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: ORYZA SATIVA SUBSP. JAPONICA;                   
SOURCE   3 ORGANISM_COMMON: RICE;                                               
SOURCE   4 ORGANISM_TAXID: 39947;                                               
SOURCE   5 GENE: LOC_OS03G11420, OS03G0212800, OS3BGLU6 LOCUS ID: OS03G0212800; 
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: ORIGAMI(DE3);                              
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: PET32A+/DEST                              
KEYWDS    BETA-ALPHA BARREL, GLYCOSIDASE, HYDROLASE                             
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    S.SESHADRI,T.AKIYAMA,R.OPASSIRI,B.KUAPRASERT,J.R.K.CAIRNS             
REVDAT   4   06-NOV-24 3GNO    1       REMARK                                   
REVDAT   3   01-NOV-23 3GNO    1       REMARK SEQADV                            
REVDAT   2   13-JUL-11 3GNO    1       VERSN                                    
REVDAT   1   21-JUL-09 3GNO    0                                                
JRNL        AUTH   S.SESHADRI,T.AKIYAMA,R.OPASSIRI,B.KUAPRASERT,J.R.K.CAIRNS    
JRNL        TITL   STRUCTURAL AND ENZYMATIC CHARACTERIZATION OF OS3BGLU6, A     
JRNL        TITL 2 RICE {BETA}-GLUCOSIDASE HYDROLYZING HYDROPHOBIC GLYCOSIDES   
JRNL        TITL 3 AND (1->3)- AND (1->2)-LINKED DISACCHARIDES.                 
JRNL        REF    PLANT PHYSIOL.                             2009              
JRNL        REFN                   ESSN 1532-2548                               
JRNL        PMID   19587102                                                     
JRNL        DOI    10.1104/PP.109.139436                                        
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.83 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC 5.2.0019                                      
REMARK   3   AUTHORS     : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,              
REMARK   3               : NICHOLLS,WINN,LONG,VAGIN                             
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : MAXIMUM LIKELIHOOD                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.83                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 24.80                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 99.1                           
REMARK   3   NUMBER OF REFLECTIONS             : 44199                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.166                           
REMARK   3   R VALUE            (WORKING SET) : 0.164                           
REMARK   3   FREE R VALUE                     : 0.204                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.000                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 2347                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 20                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 1.83                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 1.88                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : 3216                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 98.86                        
REMARK   3   BIN R VALUE           (WORKING SET) : 0.1920                       
REMARK   3   BIN FREE R VALUE SET COUNT          : 156                          
REMARK   3   BIN FREE R VALUE                    : 0.2760                       
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 3836                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 44                                      
REMARK   3   SOLVENT ATOMS            : 466                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 14.89                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 14.44                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : 0.00000                                              
REMARK   3    B22 (A**2) : 0.00000                                              
REMARK   3    B33 (A**2) : 0.01000                                              
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): 0.124         
REMARK   3   ESU BASED ON FREE R VALUE                       (A): 0.120         
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): 0.076         
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.399         
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.955                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.931                         
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):  4019 ; 0.013 ; 0.022       
REMARK   3   BOND LENGTHS OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  5455 ; 1.321 ; 1.932       
REMARK   3   BOND ANGLES OTHERS          (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):   484 ;12.806 ; 5.000       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):   203 ;33.867 ;23.498       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):   617 ;12.858 ;15.000       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):    25 ;19.420 ;15.000       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):   560 ; 0.097 ; 0.200       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):  3132 ; 0.006 ; 0.020       
REMARK   3   GENERAL PLANES OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):  2001 ; 0.203 ; 0.200       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):  2741 ; 0.314 ; 0.200       
REMARK   3   NON-BONDED TORSION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):   428 ; 0.135 ; 0.200       
REMARK   3   H-BOND (X...Y) OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):    37 ; 0.228 ; 0.200       
REMARK   3   SYMMETRY VDW OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):    18 ; 0.172 ; 0.200       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):  2390 ; 0.702 ; 1.500       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):  3833 ; 1.254 ; 2.000       
REMARK   3   MAIN-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):  1629 ; 2.070 ; 3.000       
REMARK   3   SIDE-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):  1618 ; 3.134 ; 4.500       
REMARK   3   SIDE-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B REFINED ATOMS     (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B OTHER ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NUMBER OF DIFFERENT NCS GROUPS : NULL                              
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : MASK                                                 
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : 1.20                                          
REMARK   3   ION PROBE RADIUS   : 0.80                                          
REMARK   3   SHRINKAGE RADIUS   : 0.80                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING   
REMARK   3  POSITIONS                                                           
REMARK   4                                                                      
REMARK   4 3GNO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-MAR-09.                  
REMARK 100 THE DEPOSITION ID IS D_1000052087.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 19-AUG-08                          
REMARK 200  TEMPERATURE           (KELVIN) : 110                                
REMARK 200  PH                             : 6.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : NSRRC                              
REMARK 200  BEAMLINE                       : BL13B1                             
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.0000                             
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC QUANTUM 315                   
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : HKL-2000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 45193                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.830                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 30.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 0.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 98.9                               
REMARK 200  DATA REDUNDANCY                : 7.000                              
REMARK 200  R MERGE                    (I) : 0.09500                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 18.9900                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.83                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.90                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 96.8                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 6.90                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.36600                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 4.900                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: MOLREP                                                
REMARK 200 STARTING MODEL: PDB ENTRY 1CBG                                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 47.95                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 21% PEG 5000 MME, 0.1M BIS-TRIS, PH      
REMARK 280  6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 288K                
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21                       
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X+1/2,-Y,Z+1/2                                         
REMARK 290       3555   -X,Y+1/2,-Z+1/2                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       28.40450            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       50.85500            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       45.24450            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       50.85500            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       28.40450            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       45.24450            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     SER A     1                                                      
REMARK 465     PHE A     2                                                      
REMARK 465     THR A     3                                                      
REMARK 465     MET A     4                                                      
REMARK 465     ALA A     5                                                      
REMARK 465     GLN A     6                                                      
REMARK 465     GLN A     7                                                      
REMARK 465     SER A     8                                                      
REMARK 465     GLY A     9                                                      
REMARK 465     GLY A    10                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     LYS A 114    NZ                                                  
REMARK 470     GLU A 296    OE1  OE2                                            
REMARK 470     GLU A 383    OE1  OE2                                            
REMARK 470     LYS A 432    NZ                                                  
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS                                      
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)               
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   RES CSSEQI ATM2   DEVIATION                     
REMARK 500    GLU A  73   CD    GLU A  73   OE2     0.082                       
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ALA A  65     -124.52     50.66                                   
REMARK 500    TRP A 133       -5.11     89.29                                   
REMARK 500    TYR A 143       22.25   -150.56                                   
REMARK 500    ASN A 209      105.54   -160.02                                   
REMARK 500    GLN A 273      -61.84    -99.19                                   
REMARK 500    ASP A 413       53.50    -93.39                                   
REMARK 500    TRP A 452     -130.33     52.49                                   
REMARK 500    ASP A 469       58.47   -142.15                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRS A 1001                
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1002                
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1003                
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1004                
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1005                
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC6                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1006                
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC7                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1007                
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 3GNP   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF A RICE OS3BGLU6 BETA-GLUCOSIDASE WITH OCTYL-    
REMARK 900 BETA-D-THIO-GLUCOSIDE                                                
REMARK 900 RELATED ID: 3GNR   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF A RICE OS3BGLU6 BETA-GLUCOSIDASE WITH           
REMARK 900 COVALENTLY BOUND 2-DEOXY-2-FLUOROGLUCOSIDE TO THE CATALYTIC          
REMARK 900 NUCLEOPHILE E396                                                     
DBREF  3GNO A    5   488  UNP    Q8L7J2   Q8L7J2_ORYSJ    38    521             
SEQADV 3GNO SER A    1  UNP  Q8L7J2              EXPRESSION TAG                 
SEQADV 3GNO PHE A    2  UNP  Q8L7J2              EXPRESSION TAG                 
SEQADV 3GNO THR A    3  UNP  Q8L7J2              EXPRESSION TAG                 
SEQADV 3GNO MET A    4  UNP  Q8L7J2              EXPRESSION TAG                 
SEQRES   1 A  488  SER PHE THR MET ALA GLN GLN SER GLY GLY GLY LEU THR          
SEQRES   2 A  488  ARG GLY SER PHE PRO GLU GLY PHE VAL PHE GLY THR ALA          
SEQRES   3 A  488  SER ALA ALA TYR GLN TYR GLU GLY ALA VAL LYS GLU ASP          
SEQRES   4 A  488  GLY ARG GLY GLN THR ILE TRP ASP THR PHE ALA HIS THR          
SEQRES   5 A  488  PHE GLY LYS ILE THR ASP PHE SER ASN ALA ASP VAL ALA          
SEQRES   6 A  488  VAL ASP GLN TYR HIS ARG PHE GLU GLU ASP ILE GLN LEU          
SEQRES   7 A  488  MET ALA ASP MET GLY MET ASP ALA TYR ARG PHE SER ILE          
SEQRES   8 A  488  ALA TRP SER ARG ILE TYR PRO ASN GLY VAL GLY GLN VAL          
SEQRES   9 A  488  ASN GLN ALA GLY ILE ASP HIS TYR ASN LYS LEU ILE ASP          
SEQRES  10 A  488  ALA LEU LEU ALA LYS GLY ILE GLN PRO TYR VAL THR LEU          
SEQRES  11 A  488  TYR HIS TRP ASP LEU PRO GLN ALA LEU GLU ASP LYS TYR          
SEQRES  12 A  488  LYS GLY TRP LEU ASP ARG GLN ILE VAL ASP ASP PHE ALA          
SEQRES  13 A  488  ALA TYR ALA GLU THR CYS PHE ARG GLU PHE GLY ASP ARG          
SEQRES  14 A  488  VAL LYS HIS TRP ILE THR LEU ASN GLU PRO HIS THR VAL          
SEQRES  15 A  488  ALA ILE GLN GLY TYR ASP ALA GLY LEU GLN ALA PRO GLY          
SEQRES  16 A  488  ARG CYS SER VAL LEU LEU HIS LEU TYR CYS LYS ALA GLY          
SEQRES  17 A  488  ASN SER GLY THR GLU PRO TYR VAL VAL ALA HIS HIS PHE          
SEQRES  18 A  488  ILE LEU ALA HIS ALA ALA ALA ALA SER ILE TYR ARG THR          
SEQRES  19 A  488  LYS TYR LYS ALA THR GLN ASN GLY GLN LEU GLY ILE ALA          
SEQRES  20 A  488  PHE ASP VAL MET TRP PHE GLU PRO MET SER ASN THR THR          
SEQRES  21 A  488  ILE ASP ILE GLU ALA ALA LYS ARG ALA GLN GLU PHE GLN          
SEQRES  22 A  488  LEU GLY TRP PHE ALA ASP PRO PHE PHE PHE GLY ASP TYR          
SEQRES  23 A  488  PRO ALA THR MET ARG ALA ARG VAL GLY GLU ARG LEU PRO          
SEQRES  24 A  488  ARG PHE THR ALA ASP GLU ALA ALA VAL VAL LYS GLY ALA          
SEQRES  25 A  488  LEU ASP PHE VAL GLY ILE ASN HIS TYR THR THR TYR TYR          
SEQRES  26 A  488  THR ARG HIS ASN ASN THR ASN ILE ILE GLY THR LEU LEU          
SEQRES  27 A  488  ASN ASN THR LEU ALA ASP THR GLY THR VAL SER LEU PRO          
SEQRES  28 A  488  PHE LYS ASN GLY LYS PRO ILE GLY ASP ARG ALA ASN SER          
SEQRES  29 A  488  ILE TRP LEU TYR ILE VAL PRO ARG GLY MET ARG SER LEU          
SEQRES  30 A  488  MET ASN TYR VAL LYS GLU ARG TYR ASN SER PRO PRO VAL          
SEQRES  31 A  488  TYR ILE THR GLU ASN GLY MET ASP ASP SER ASN ASN PRO          
SEQRES  32 A  488  PHE ILE SER ILE LYS ASP ALA LEU LYS ASP SER LYS ARG          
SEQRES  33 A  488  ILE LYS TYR HIS ASN ASP TYR LEU THR ASN LEU ALA ALA          
SEQRES  34 A  488  SER ILE LYS GLU ASP GLY CYS ASP VAL ARG GLY TYR PHE          
SEQRES  35 A  488  ALA TRP SER LEU LEU ASP ASN TRP GLU TRP ALA ALA GLY          
SEQRES  36 A  488  TYR SER SER ARG PHE GLY LEU TYR PHE VAL ASP TYR LYS          
SEQRES  37 A  488  ASP ASN LEU LYS ARG TYR PRO LYS ASN SER VAL GLN TRP          
SEQRES  38 A  488  PHE LYS ALA LEU LEU LYS THR                                  
HET    TRS  A1001      16                                                       
HET    GOL  A1002       6                                                       
HET    GOL  A1003       6                                                       
HET    GOL  A1004       6                                                       
HET    GOL  A1005       6                                                       
HET    GOL  A1006       6                                                       
HET    GOL  A1007       6                                                       
HETNAM     TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL                         
HETNAM     GOL GLYCEROL                                                         
HETSYN     TRS TRIS BUFFER                                                      
HETSYN     GOL GLYCERIN; PROPANE-1,2,3-TRIOL                                    
FORMUL   2  TRS    C4 H12 N O3 1+                                               
FORMUL   3  GOL    6(C3 H8 O3)                                                  
FORMUL   9  HOH   *466(H2 O)                                                    
HELIX    1   1 THR A   13  PHE A   17  5                                   5    
HELIX    2   2 ALA A   28  GLU A   33  1                                   6    
HELIX    3   3 THR A   44  HIS A   51  1                                   8    
HELIX    4   4 ASP A   67  ASP A   81  1                                  15    
HELIX    5   5 ALA A   92  TYR A   97  1                                   6    
HELIX    6   6 ASN A  105  LYS A  122  1                                  18    
HELIX    7   7 PRO A  136  LYS A  144  1                                   9    
HELIX    8   8 GLY A  145  ASP A  148  5                                   4    
HELIX    9   9 ARG A  149  GLY A  167  1                                  19    
HELIX   10  10 GLU A  178  ASP A  188  1                                  11    
HELIX   11  11 THR A  212  TYR A  236  1                                  25    
HELIX   12  12 TYR A  236  ASN A  241  1                                   6    
HELIX   13  13 THR A  259  LEU A  274  1                                  16    
HELIX   14  14 LEU A  274  GLY A  284  1                                  11    
HELIX   15  15 PRO A  287  GLY A  295  1                                   9    
HELIX   16  16 GLU A  296  LEU A  298  5                                   3    
HELIX   17  17 THR A  302  LYS A  310  1                                   9    
HELIX   18  18 ASN A  340  THR A  345  1                                   6    
HELIX   19  19 PRO A  371  ASN A  386  1                                  16    
HELIX   20  20 SER A  406  LEU A  411  1                                   6    
HELIX   21  21 ASP A  413  GLU A  433  1                                  21    
HELIX   22  22 GLU A  451  TYR A  456  5                                   6    
HELIX   23  23 LYS A  476  LYS A  487  1                                  12    
SHEET    1   A 9 VAL A  22  ALA A  26  0                                        
SHEET    2   A 9 ALA A  86  SER A  90  1  O  ARG A  88   N  THR A  25           
SHEET    3   A 9 GLN A 125  TYR A 131  1  O  THR A 129   N  PHE A  89           
SHEET    4   A 9 HIS A 172  ASN A 177  1  O  ILE A 174   N  VAL A 128           
SHEET    5   A 9 GLN A 243  ASP A 249  1  O  GLY A 245   N  THR A 175           
SHEET    6   A 9 PHE A 315  ASN A 319  1  O  ASN A 319   N  PHE A 248           
SHEET    7   A 9 VAL A 390  ASN A 395  1  O  TYR A 391   N  ILE A 318           
SHEET    8   A 9 VAL A 438  TRP A 444  1  O  ARG A 439   N  VAL A 390           
SHEET    9   A 9 VAL A  22  ALA A  26  1  N  ALA A  26   O  ALA A 443           
SHEET    1   B 3 TRP A 252  PRO A 255  0                                        
SHEET    2   B 3 THR A 323  HIS A 328  1  O  TYR A 324   N  GLU A 254           
SHEET    3   B 3 THR A 347  LEU A 350 -1  O  LEU A 350   N  TYR A 325           
SHEET    1   C 2 PHE A 352  LYS A 353  0                                        
SHEET    2   C 2 LYS A 356  PRO A 357 -1  O  LYS A 356   N  LYS A 353           
SHEET    1   D 2 ASP A 399  SER A 400  0                                        
SHEET    2   D 2 SER A 458  ARG A 459 -1  O  ARG A 459   N  ASP A 399           
SHEET    1   E 2 TYR A 463  VAL A 465  0                                        
SHEET    2   E 2 ARG A 473  PRO A 475 -1  O  TYR A 474   N  PHE A 464           
SSBOND   1 CYS A  197    CYS A  205                          1555   1555  2.02  
CISPEP   1 ALA A  193    PRO A  194          0         2.99                     
CISPEP   2 TRP A  444    SER A  445          0         1.17                     
SITE     1 AC1 12 GLN A  31  HIS A 132  GLU A 178  TYR A 321                    
SITE     2 AC1 12 TRP A 366  GLU A 394  TRP A 444  GLU A 451                    
SITE     3 AC1 12 TRP A 452  HOH A 672  HOH A 738  HOH A 948                    
SITE     1 AC2  4 ASP A  58  TYR A 467  HOH A 602  HOH A 801                    
SITE     1 AC3  4 PRO A 351  ILE A 365  TYR A 368  HOH A 919                    
SITE     1 AC4  6 ALA A  80  GLY A  83  MET A  84  ASP A  85                    
SITE     2 AC4  6 LYS A 122  HOH A 930                                          
SITE     1 AC5  3 LYS A 408  LEU A 411  TYR A 474                               
SITE     1 AC6  5 ASP A 168  LYS A 171  THR A 239  GLN A 240                    
SITE     2 AC6  5 HOH A 808                                                     
SITE     1 AC7 10 ASN A 401  ASN A 402  PRO A 403  ILE A 405                    
SITE     2 AC7 10 ARG A 459  PHE A 464  LYS A 468  HOH A 547                    
SITE     3 AC7 10 HOH A 797  HOH A 837                                          
CRYST1   56.809   90.489  101.710  90.00  90.00  90.00 P 21 21 21    4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.017603  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.011051  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.009832        0.00000