HEADER TOXIN 18-MAR-09 3GNZ TITLE TOXIN FOLD FOR MICROBIAL ATTACK AND PLANT DEFENSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 25 KDA PROTEIN ELICITOR; COMPND 3 CHAIN: P; COMPND 4 FRAGMENT: UNP RESIDUES 22-234; COMPND 5 SYNONYM: NEP1-LIKE PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYTHIUM APHANIDERMATUM; SOURCE 3 ORGANISM_TAXID: 65070; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PQE60 KEYWDS TOXIN, NECROSI, ETHYLENEINDUCING, IMMUNITYASSOCIATED RESPONSES, KEYWDS 2 PLANTS EXPDTA X-RAY DIFFRACTION AUTHOR C.OTTMANN,B.LUBERACKI,I.KUEFNER,W.KOCH,F.BRUNNER,M.WEYAND,L.MATTINEN, AUTHOR 2 M.PIRHONEN,G.ANDERLUH,H.U.SEITZ,T.NUERNBERGER,C.OECKING REVDAT 5 30-OCT-24 3GNZ 1 REMARK REVDAT 4 01-NOV-23 3GNZ 1 REMARK LINK REVDAT 3 01-NOV-17 3GNZ 1 REMARK REVDAT 2 07-JUL-09 3GNZ 1 JRNL REVDAT 1 09-JUN-09 3GNZ 0 JRNL AUTH C.OTTMANN,B.LUBERACKI,I.KUFNER,W.KOCH,F.BRUNNER,M.WEYAND, JRNL AUTH 2 L.MATTINEN,M.PIRHONEN,G.ANDERLUH,H.U.SEITZ,T.NURNBERGER, JRNL AUTH 3 C.OECKING JRNL TITL A COMMON TOXIN FOLD MEDIATES MICROBIAL ATTACK AND PLANT JRNL TITL 2 DEFENSE JRNL REF PROC.NATL.ACAD.SCI.USA V. 106 10359 2009 JRNL REFN ISSN 0027-8424 JRNL PMID 19520828 JRNL DOI 10.1073/PNAS.0902362106 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH B.LUBERACKI,M.WEYAND,U.SEITZ,W.KOCH,C.OECKING,C.OTTMANN REMARK 1 TITL PURIFICATION, CRYSTALLIZATION AND PRELIMINARY X-RAY REMARK 1 TITL 2 DIFFRACTION ANALYSIS OF AN OOMYCETE-DERIVED NEP1-LIKE REMARK 1 TITL 3 PROTEIN. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.F V. 64 1178 2008 REMARK 1 REFN ESSN 1744-3091 REMARK 1 PMID 19052381 REMARK 1 DOI 10.1107/S1744309108037640 REMARK 2 REMARK 2 RESOLUTION. 1.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.3.0037 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 50423 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.184 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2654 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.39 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3187 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2390 REMARK 3 BIN FREE R VALUE SET COUNT : 167 REMARK 3 BIN FREE R VALUE : 0.3090 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1630 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 449 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.25000 REMARK 3 B22 (A**2) : -0.20000 REMARK 3 B33 (A**2) : -0.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.058 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.053 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.031 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.626 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1884 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2617 ; 1.218 ; 1.930 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 265 ; 5.809 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 88 ;35.500 ;24.773 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 295 ;11.889 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;15.874 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 274 ; 0.078 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1527 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 911 ; 0.193 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1305 ; 0.306 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 359 ; 0.152 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 4 ; 0.076 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 40 ; 0.156 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 38 ; 0.132 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1163 ; 0.869 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1909 ; 1.412 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 721 ; 1.797 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 685 ; 2.569 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 1884 ; 0.957 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 451 ; 3.461 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 1799 ; 2.472 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3GNZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1000052098. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUL-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0052 REMARK 200 MONOCHROMATOR : SILICON (1 1 1) CHANNEL-CUT REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53077 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.350 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.28100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3GNU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS HCL PH 9.0, 20% PEG 4000, REMARK 280 0.5M MGCL2, 5% METHANOL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y+1/2,-Z REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 34.81500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 70.45000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 34.81500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 70.45000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 34.81500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 70.45000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 34.81500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 70.45000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 MG MG P 215 LIES ON A SPECIAL POSITION. REMARK 375 HOH P 260 LIES ON A SPECIAL POSITION. REMARK 375 HOH P 262 LIES ON A SPECIAL POSITION. REMARK 375 HOH P 282 LIES ON A SPECIAL POSITION. REMARK 375 HOH P 441 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY P 57 REMARK 465 SER P 58 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN P 59 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH P 353 O HOH P 432 2.09 REMARK 500 OD2 ASP P 158 O HOH P 623 2.10 REMARK 500 O HOH P 412 O HOH P 438 2.10 REMARK 500 O HOH P 407 O HOH P 434 2.10 REMARK 500 O HOH P 398 O HOH P 427 2.14 REMARK 500 NE2 GLN P 204 O HOH P 438 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS P 103 148.28 72.03 REMARK 500 HIS P 128 -123.54 56.22 REMARK 500 ASP P 158 -166.10 -77.74 REMARK 500 LYS P 200 -141.49 -91.32 REMARK 500 PHE P 212 38.65 -92.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG P 215 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP P 6 OD2 REMARK 620 2 HOH P 409 O 88.7 REMARK 620 3 HOH P 424 O 85.9 86.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG P 214 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP P 93 OD2 REMARK 620 2 ASP P 104 OD1 102.7 REMARK 620 3 HOH P 331 O 96.5 88.5 REMARK 620 4 HOH P 353 O 174.6 77.5 78.1 REMARK 620 5 HOH P 417 O 88.3 92.5 174.8 97.0 REMARK 620 6 HOH P 422 O 85.2 170.8 85.9 94.2 92.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG P 214 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG P 215 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3GNU RELATED DB: PDB DBREF 3GNZ P 1 213 UNP Q9SPD4 Q9SPD4_9STRA 22 234 SEQRES 1 P 213 ALA VAL ILE ASN HIS ASP ALA VAL PRO VAL TRP PRO GLN SEQRES 2 P 213 PRO GLU PRO ALA ASP ALA THR GLN ALA LEU ALA VAL ARG SEQRES 3 P 213 PHE LYS PRO GLN LEU ASP VAL VAL ASN GLY CYS GLN PRO SEQRES 4 P 213 TYR PRO ALA VAL ASP PRO GLN GLY ASN THR SER GLY GLY SEQRES 5 P 213 LEU LYS PRO SER GLY SER GLN ALA ALA ALA CYS ARG ASP SEQRES 6 P 213 MET SER LYS ALA GLN VAL TYR SER ARG SER GLY THR TYR SEQRES 7 P 213 ASN GLY TYR TYR ALA ILE MET TYR SER TRP TYR MET PRO SEQRES 8 P 213 LYS ASP SER PRO SER THR GLY ILE GLY HIS ARG HIS ASP SEQRES 9 P 213 TRP GLU ASN VAL VAL VAL TRP LEU ASP ASN ALA ALA SER SEQRES 10 P 213 ALA ASN ILE VAL ALA LEU SER ALA SER ALA HIS SER GLY SEQRES 11 P 213 TYR LYS LYS SER PHE PRO ALA ASP LYS SER TYR LEU ASP SEQRES 12 P 213 GLY ILE THR ALA LYS ILE SER TYR LYS SER THR TRP PRO SEQRES 13 P 213 LEU ASP HIS GLU LEU GLY PHE THR THR SER ALA GLY LYS SEQRES 14 P 213 GLN GLN PRO LEU ILE GLN TRP GLU GLN MET THR GLN ALA SEQRES 15 P 213 ALA ARG ASP ALA LEU GLU SER THR ASP PHE GLY ASN ALA SEQRES 16 P 213 ASN VAL PRO PHE LYS SER ASN PHE GLN ASP LYS LEU VAL SEQRES 17 P 213 LYS ALA PHE PHE GLN HET MG P 214 1 HET MG P 215 1 HETNAM MG MAGNESIUM ION FORMUL 2 MG 2(MG 2+) FORMUL 4 HOH *449(H2 O) HELIX 1 1 ASN P 4 VAL P 8 5 5 HELIX 2 2 ASP P 18 PHE P 27 1 10 HELIX 3 3 ALA P 60 ARG P 64 5 5 HELIX 4 4 ASP P 65 ALA P 69 5 5 HELIX 5 5 ASP P 138 SER P 140 5 3 HELIX 6 6 GLU P 177 MET P 179 5 3 HELIX 7 7 THR P 180 THR P 190 1 11 HELIX 8 8 ASN P 202 PHE P 211 1 10 SHEET 1 A 2 VAL P 2 ILE P 3 0 SHEET 2 A 2 THR P 49 SER P 50 1 O THR P 49 N ILE P 3 SHEET 1 B 3 GLN P 30 VAL P 33 0 SHEET 2 B 3 THR P 146 LYS P 152 1 O ALA P 147 N GLN P 30 SHEET 3 B 3 LEU P 142 ASP P 143 -1 N ASP P 143 O THR P 146 SHEET 1 C 3 GLN P 30 VAL P 33 0 SHEET 2 C 3 THR P 146 LYS P 152 1 O ALA P 147 N GLN P 30 SHEET 3 C 3 GLU P 160 PHE P 163 -1 O GLY P 162 N SER P 150 SHEET 1 D 6 GLY P 130 SER P 134 0 SHEET 2 D 6 ILE P 120 ALA P 127 -1 N ALA P 125 O LYS P 132 SHEET 3 D 6 HIS P 101 LEU P 112 -1 N ASN P 107 O SER P 126 SHEET 4 D 6 TYR P 81 ASP P 93 -1 N TYR P 82 O LEU P 112 SHEET 5 D 6 VAL P 71 TYR P 78 -1 N GLY P 76 O ALA P 83 SHEET 6 D 6 LEU P 173 GLN P 175 1 O ILE P 174 N VAL P 71 SSBOND 1 CYS P 37 CYS P 63 1555 1555 2.03 LINK OD2 ASP P 6 MG MG P 215 1555 1555 2.14 LINK OD2 ASP P 93 MG MG P 214 1555 1555 2.25 LINK OD1AASP P 104 MG MG P 214 1555 1555 2.17 LINK MG MG P 214 O HOH P 331 1555 1555 1.99 LINK MG MG P 214 O HOH P 353 1555 1555 1.93 LINK MG MG P 214 O HOH P 417 1555 1555 1.89 LINK MG MG P 214 O HOH P 422 1555 1555 1.92 LINK MG MG P 215 O HOH P 409 1555 1555 2.09 LINK MG MG P 215 O HOH P 424 1555 1555 2.07 CISPEP 1 PHE P 135 PRO P 136 0 -10.64 CISPEP 2 TRP P 155 PRO P 156 0 -0.92 CISPEP 3 TRP P 155 PRO P 156 0 0.98 SITE 1 AC1 9 ASP P 93 HIS P 101 ASP P 104 GLU P 106 SITE 2 AC1 9 HOH P 331 HOH P 353 HOH P 417 HOH P 422 SITE 3 AC1 9 HOH P 432 SITE 1 AC2 3 ASP P 6 HOH P 409 HOH P 424 CRYST1 69.630 140.900 49.620 90.00 90.00 90.00 C 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014362 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007097 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020153 0.00000