data_3GOT
# 
_entry.id   3GOT 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.387 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   3GOT         pdb_00003got 10.2210/pdb3got/pdb 
NDB   UR0192       ?            ?                   
RCSB  RCSB052128   ?            ?                   
WWPDB D_1000052128 ?            ?                   
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2009-06-23 
2 'Structure model' 1 1 2011-07-13 
3 'Structure model' 1 2 2024-02-21 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Version format compliance' 
2 3 'Structure model' 'Data collection'           
3 3 'Structure model' 'Database references'       
4 3 'Structure model' 'Derived calculations'      
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 3 'Structure model' chem_comp_atom 
2 3 'Structure model' chem_comp_bond 
3 3 'Structure model' database_2     
4 3 'Structure model' struct_site    
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1 3 'Structure model' '_database_2.pdbx_DOI'                
2 3 'Structure model' '_database_2.pdbx_database_accession' 
3 3 'Structure model' '_struct_site.pdbx_auth_asym_id'      
4 3 'Structure model' '_struct_site.pdbx_auth_comp_id'      
5 3 'Structure model' '_struct_site.pdbx_auth_seq_id'       
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        3GOT 
_pdbx_database_status.recvd_initial_deposition_date   2009-03-20 
_pdbx_database_status.deposit_site                    RCSB 
_pdbx_database_status.process_site                    RCSB 
_pdbx_database_status.status_code_sf                  REL 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.SG_entry                        ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.status_code_nmr_data            ? 
_pdbx_database_status.methods_development_category    ? 
# 
loop_
_pdbx_database_related.db_name 
_pdbx_database_related.db_id 
_pdbx_database_related.details 
_pdbx_database_related.content_type 
PDB 1U8D 'Guanine riboswitch bound to hypoxanthine.'                 unspecified 
PDB 2EET 'Guanine riboswitch A21G,U75C mutant bound to hypoxanthine' unspecified 
PDB 3GOG 'Guanine riboswitch A21G,U75C bound to hypoxanthine'        unspecified 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Gilbert, S.D.' 1 
'Reyes, F.E.'   2 
'Batey, R.T.'   3 
# 
_citation.id                        primary 
_citation.title                     
'Adaptive ligand binding by the purine riboswitch in the recognition of Guanine and adenine analogs' 
_citation.journal_abbrev            Structure 
_citation.journal_volume            17 
_citation.page_first                857 
_citation.page_last                 868 
_citation.year                      2009 
_citation.journal_id_ASTM           STRUE6 
_citation.country                   UK 
_citation.journal_id_ISSN           0969-2126 
_citation.journal_id_CSD            2005 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   19523903 
_citation.pdbx_database_id_DOI      10.1016/j.str.2009.04.009 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Gilbert, S.D.' 1 ? 
primary 'Reyes, F.E.'   2 ? 
primary 'Edwards, A.L.' 3 ? 
primary 'Batey, R.T.'   4 ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer     syn 'Guanine riboswitch'    21507.768 1   ? C74U ? ? 
2 non-polymer syn 2-fluoroadenine         153.117   1   ? ?    ? ? 
3 non-polymer syn 'ACETATE ION'           59.044    1   ? ?    ? ? 
4 non-polymer syn 'COBALT HEXAMMINE(III)' 161.116   11  ? ?    ? ? 
5 water       nat water                   18.015    202 ? ?    ? ? 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           polyribonucleotide 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   no 
_entity_poly.pdbx_seq_one_letter_code       GGACAUAUAAUCGCGUGGAUAUGGCACGCAAGUUUCUACCGGGCACCGUAAAUGUCCGAUUAUGUCC 
_entity_poly.pdbx_seq_one_letter_code_can   GGACAUAUAAUCGCGUGGAUAUGGCACGCAAGUUUCUACCGGGCACCGUAAAUGUCCGAUUAUGUCC 
_entity_poly.pdbx_strand_id                 A 
_entity_poly.pdbx_target_identifier         ? 
# 
loop_
_pdbx_entity_nonpoly.entity_id 
_pdbx_entity_nonpoly.name 
_pdbx_entity_nonpoly.comp_id 
2 2-fluoroadenine         A2F 
3 'ACETATE ION'           ACT 
4 'COBALT HEXAMMINE(III)' NCO 
5 water                   HOH 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  G n 
1 2  G n 
1 3  A n 
1 4  C n 
1 5  A n 
1 6  U n 
1 7  A n 
1 8  U n 
1 9  A n 
1 10 A n 
1 11 U n 
1 12 C n 
1 13 G n 
1 14 C n 
1 15 G n 
1 16 U n 
1 17 G n 
1 18 G n 
1 19 A n 
1 20 U n 
1 21 A n 
1 22 U n 
1 23 G n 
1 24 G n 
1 25 C n 
1 26 A n 
1 27 C n 
1 28 G n 
1 29 C n 
1 30 A n 
1 31 A n 
1 32 G n 
1 33 U n 
1 34 U n 
1 35 U n 
1 36 C n 
1 37 U n 
1 38 A n 
1 39 C n 
1 40 C n 
1 41 G n 
1 42 G n 
1 43 G n 
1 44 C n 
1 45 A n 
1 46 C n 
1 47 C n 
1 48 G n 
1 49 U n 
1 50 A n 
1 51 A n 
1 52 A n 
1 53 U n 
1 54 G n 
1 55 U n 
1 56 C n 
1 57 C n 
1 58 G n 
1 59 A n 
1 60 U n 
1 61 U n 
1 62 A n 
1 63 U n 
1 64 G n 
1 65 U n 
1 66 C n 
1 67 C n 
# 
_pdbx_entity_src_syn.entity_id              1 
_pdbx_entity_src_syn.pdbx_src_id            1 
_pdbx_entity_src_syn.pdbx_alt_source_flag   sample 
_pdbx_entity_src_syn.pdbx_beg_seq_num       ? 
_pdbx_entity_src_syn.pdbx_end_seq_num       ? 
_pdbx_entity_src_syn.organism_scientific    ? 
_pdbx_entity_src_syn.organism_common_name   ? 
_pdbx_entity_src_syn.ncbi_taxonomy_id       ? 
_pdbx_entity_src_syn.details                
;This sequence was engineered based on the guanine riboswitch in the 5'UTR of the xpt-pbuX gene in Bacillus subtilis
;
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
A   'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ?                         'C10 H14 N5 O7 P' 347.221 
A2F non-polymer   . 2-fluoroadenine              2-fluoro-7H-purin-6-amine 'C5 H4 F N5'      153.117 
ACT non-polymer   . 'ACETATE ION'                ?                         'C2 H3 O2 -1'     59.044  
C   'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE"  ?                         'C9 H14 N3 O8 P'  323.197 
G   'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ?                         'C10 H14 N5 O8 P' 363.221 
HOH non-polymer   . WATER                        ?                         'H2 O'            18.015  
NCO non-polymer   . 'COBALT HEXAMMINE(III)'      ?                         'Co H18 N6 3'     161.116 
U   'RNA linking' y "URIDINE-5'-MONOPHOSPHATE"   ?                         'C9 H13 N2 O9 P'  324.181 
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  G 1  15 15 G G A . n 
A 1 2  G 2  16 16 G G A . n 
A 1 3  A 3  17 17 A A A . n 
A 1 4  C 4  18 18 C C A . n 
A 1 5  A 5  19 19 A A A . n 
A 1 6  U 6  20 20 U U A . n 
A 1 7  A 7  21 21 A A A . n 
A 1 8  U 8  22 22 U U A . n 
A 1 9  A 9  23 23 A A A . n 
A 1 10 A 10 24 24 A A A . n 
A 1 11 U 11 25 25 U U A . n 
A 1 12 C 12 26 26 C C A . n 
A 1 13 G 13 27 27 G G A . n 
A 1 14 C 14 28 28 C C A . n 
A 1 15 G 15 29 29 G G A . n 
A 1 16 U 16 30 30 U U A . n 
A 1 17 G 17 31 31 G G A . n 
A 1 18 G 18 32 32 G G A . n 
A 1 19 A 19 33 33 A A A . n 
A 1 20 U 20 34 34 U U A . n 
A 1 21 A 21 35 35 A A A . n 
A 1 22 U 22 36 36 U U A . n 
A 1 23 G 23 37 37 G G A . n 
A 1 24 G 24 38 38 G G A . n 
A 1 25 C 25 39 39 C C A . n 
A 1 26 A 26 40 40 A A A . n 
A 1 27 C 27 41 41 C C A . n 
A 1 28 G 28 42 42 G G A . n 
A 1 29 C 29 43 43 C C A . n 
A 1 30 A 30 44 44 A A A . n 
A 1 31 A 31 45 45 A A A . n 
A 1 32 G 32 46 46 G G A . n 
A 1 33 U 33 47 47 U U A . n 
A 1 34 U 34 48 48 U U A . n 
A 1 35 U 35 49 49 U U A . n 
A 1 36 C 36 50 50 C C A . n 
A 1 37 U 37 51 51 U U A . n 
A 1 38 A 38 52 52 A A A . n 
A 1 39 C 39 53 53 C C A . n 
A 1 40 C 40 54 54 C C A . n 
A 1 41 G 41 55 55 G G A . n 
A 1 42 G 42 56 56 G G A . n 
A 1 43 G 43 57 57 G G A . n 
A 1 44 C 44 58 58 C C A . n 
A 1 45 A 45 59 59 A A A . n 
A 1 46 C 46 60 60 C C A . n 
A 1 47 C 47 61 61 C C A . n 
A 1 48 G 48 62 62 G G A . n 
A 1 49 U 49 63 63 U U A . n 
A 1 50 A 50 64 64 A A A . n 
A 1 51 A 51 65 65 A A A . n 
A 1 52 A 52 66 66 A A A . n 
A 1 53 U 53 67 67 U U A . n 
A 1 54 G 54 68 68 G G A . n 
A 1 55 U 55 69 69 U U A . n 
A 1 56 C 56 70 70 C C A . n 
A 1 57 C 57 71 71 C C A . n 
A 1 58 G 58 72 72 G G A . n 
A 1 59 A 59 73 73 A A A . n 
A 1 60 U 60 74 74 U U A . n 
A 1 61 U 61 75 75 U U A . n 
A 1 62 A 62 76 76 A A A . n 
A 1 63 U 63 77 77 U U A . n 
A 1 64 G 64 78 78 G G A . n 
A 1 65 U 65 79 79 U U A . n 
A 1 66 C 66 80 80 C C A . n 
A 1 67 C 67 81 81 C C A . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
B 2 A2F 1   91  91  A2F A2F A . 
C 3 ACT 1   96  96  ACT ACT A . 
D 4 NCO 1   101 101 NCO NCO A . 
E 4 NCO 1   102 102 NCO NCO A . 
F 4 NCO 1   103 103 NCO NCO A . 
G 4 NCO 1   104 104 NCO NCO A . 
H 4 NCO 1   105 105 NCO NCO A . 
I 4 NCO 1   106 106 NCO NCO A . 
J 4 NCO 1   107 107 NCO NCO A . 
K 4 NCO 1   108 108 NCO NCO A . 
L 4 NCO 1   109 109 NCO NCO A . 
M 4 NCO 1   111 111 NCO NCO A . 
N 4 NCO 1   112 112 NCO NCO A . 
O 5 HOH 1   301 301 HOH HOH A . 
O 5 HOH 2   302 302 HOH HOH A . 
O 5 HOH 3   303 303 HOH HOH A . 
O 5 HOH 4   304 304 HOH HOH A . 
O 5 HOH 5   305 305 HOH HOH A . 
O 5 HOH 6   306 306 HOH HOH A . 
O 5 HOH 7   307 307 HOH HOH A . 
O 5 HOH 8   308 308 HOH HOH A . 
O 5 HOH 9   309 309 HOH HOH A . 
O 5 HOH 10  310 310 HOH HOH A . 
O 5 HOH 11  311 311 HOH HOH A . 
O 5 HOH 12  312 312 HOH HOH A . 
O 5 HOH 13  313 313 HOH HOH A . 
O 5 HOH 14  314 314 HOH HOH A . 
O 5 HOH 15  315 315 HOH HOH A . 
O 5 HOH 16  316 316 HOH HOH A . 
O 5 HOH 17  317 317 HOH HOH A . 
O 5 HOH 18  318 318 HOH HOH A . 
O 5 HOH 19  319 319 HOH HOH A . 
O 5 HOH 20  320 320 HOH HOH A . 
O 5 HOH 21  321 321 HOH HOH A . 
O 5 HOH 22  322 322 HOH HOH A . 
O 5 HOH 23  323 323 HOH HOH A . 
O 5 HOH 24  324 324 HOH HOH A . 
O 5 HOH 25  325 325 HOH HOH A . 
O 5 HOH 26  326 326 HOH HOH A . 
O 5 HOH 27  327 327 HOH HOH A . 
O 5 HOH 28  328 328 HOH HOH A . 
O 5 HOH 29  329 329 HOH HOH A . 
O 5 HOH 30  330 330 HOH HOH A . 
O 5 HOH 31  331 331 HOH HOH A . 
O 5 HOH 32  332 332 HOH HOH A . 
O 5 HOH 33  333 333 HOH HOH A . 
O 5 HOH 34  334 334 HOH HOH A . 
O 5 HOH 35  335 335 HOH HOH A . 
O 5 HOH 36  336 336 HOH HOH A . 
O 5 HOH 37  337 337 HOH HOH A . 
O 5 HOH 38  338 338 HOH HOH A . 
O 5 HOH 39  339 339 HOH HOH A . 
O 5 HOH 40  340 340 HOH HOH A . 
O 5 HOH 41  341 341 HOH HOH A . 
O 5 HOH 42  342 342 HOH HOH A . 
O 5 HOH 43  343 343 HOH HOH A . 
O 5 HOH 44  344 344 HOH HOH A . 
O 5 HOH 45  345 345 HOH HOH A . 
O 5 HOH 46  346 346 HOH HOH A . 
O 5 HOH 47  347 347 HOH HOH A . 
O 5 HOH 48  348 348 HOH HOH A . 
O 5 HOH 49  349 349 HOH HOH A . 
O 5 HOH 50  350 350 HOH HOH A . 
O 5 HOH 51  351 351 HOH HOH A . 
O 5 HOH 52  352 352 HOH HOH A . 
O 5 HOH 53  353 353 HOH HOH A . 
O 5 HOH 54  354 354 HOH HOH A . 
O 5 HOH 55  355 355 HOH HOH A . 
O 5 HOH 56  356 356 HOH HOH A . 
O 5 HOH 57  357 357 HOH HOH A . 
O 5 HOH 58  358 358 HOH HOH A . 
O 5 HOH 59  359 359 HOH HOH A . 
O 5 HOH 60  360 360 HOH HOH A . 
O 5 HOH 61  361 361 HOH HOH A . 
O 5 HOH 62  362 362 HOH HOH A . 
O 5 HOH 63  364 364 HOH HOH A . 
O 5 HOH 64  365 365 HOH HOH A . 
O 5 HOH 65  366 366 HOH HOH A . 
O 5 HOH 66  367 367 HOH HOH A . 
O 5 HOH 67  368 368 HOH HOH A . 
O 5 HOH 68  369 369 HOH HOH A . 
O 5 HOH 69  370 370 HOH HOH A . 
O 5 HOH 70  371 371 HOH HOH A . 
O 5 HOH 71  373 373 HOH HOH A . 
O 5 HOH 72  374 374 HOH HOH A . 
O 5 HOH 73  375 375 HOH HOH A . 
O 5 HOH 74  376 376 HOH HOH A . 
O 5 HOH 75  377 377 HOH HOH A . 
O 5 HOH 76  378 378 HOH HOH A . 
O 5 HOH 77  379 379 HOH HOH A . 
O 5 HOH 78  380 380 HOH HOH A . 
O 5 HOH 79  381 381 HOH HOH A . 
O 5 HOH 80  382 382 HOH HOH A . 
O 5 HOH 81  383 383 HOH HOH A . 
O 5 HOH 82  384 384 HOH HOH A . 
O 5 HOH 83  385 385 HOH HOH A . 
O 5 HOH 84  386 386 HOH HOH A . 
O 5 HOH 85  387 387 HOH HOH A . 
O 5 HOH 86  388 388 HOH HOH A . 
O 5 HOH 87  389 389 HOH HOH A . 
O 5 HOH 88  390 390 HOH HOH A . 
O 5 HOH 89  391 391 HOH HOH A . 
O 5 HOH 90  392 392 HOH HOH A . 
O 5 HOH 91  393 393 HOH HOH A . 
O 5 HOH 92  394 394 HOH HOH A . 
O 5 HOH 93  395 395 HOH HOH A . 
O 5 HOH 94  396 396 HOH HOH A . 
O 5 HOH 95  397 397 HOH HOH A . 
O 5 HOH 96  398 398 HOH HOH A . 
O 5 HOH 97  399 399 HOH HOH A . 
O 5 HOH 98  400 400 HOH HOH A . 
O 5 HOH 99  401 401 HOH HOH A . 
O 5 HOH 100 402 402 HOH HOH A . 
O 5 HOH 101 403 403 HOH HOH A . 
O 5 HOH 102 404 404 HOH HOH A . 
O 5 HOH 103 405 405 HOH HOH A . 
O 5 HOH 104 406 406 HOH HOH A . 
O 5 HOH 105 407 407 HOH HOH A . 
O 5 HOH 106 408 408 HOH HOH A . 
O 5 HOH 107 409 409 HOH HOH A . 
O 5 HOH 108 410 410 HOH HOH A . 
O 5 HOH 109 411 411 HOH HOH A . 
O 5 HOH 110 412 412 HOH HOH A . 
O 5 HOH 111 413 413 HOH HOH A . 
O 5 HOH 112 414 414 HOH HOH A . 
O 5 HOH 113 416 416 HOH HOH A . 
O 5 HOH 114 417 417 HOH HOH A . 
O 5 HOH 115 419 419 HOH HOH A . 
O 5 HOH 116 420 420 HOH HOH A . 
O 5 HOH 117 421 421 HOH HOH A . 
O 5 HOH 118 422 422 HOH HOH A . 
O 5 HOH 119 423 423 HOH HOH A . 
O 5 HOH 120 424 424 HOH HOH A . 
O 5 HOH 121 425 425 HOH HOH A . 
O 5 HOH 122 426 426 HOH HOH A . 
O 5 HOH 123 427 427 HOH HOH A . 
O 5 HOH 124 428 428 HOH HOH A . 
O 5 HOH 125 429 429 HOH HOH A . 
O 5 HOH 126 430 430 HOH HOH A . 
O 5 HOH 127 431 431 HOH HOH A . 
O 5 HOH 128 432 432 HOH HOH A . 
O 5 HOH 129 433 433 HOH HOH A . 
O 5 HOH 130 434 434 HOH HOH A . 
O 5 HOH 131 435 435 HOH HOH A . 
O 5 HOH 132 436 436 HOH HOH A . 
O 5 HOH 133 437 437 HOH HOH A . 
O 5 HOH 134 438 438 HOH HOH A . 
O 5 HOH 135 439 439 HOH HOH A . 
O 5 HOH 136 440 440 HOH HOH A . 
O 5 HOH 137 441 441 HOH HOH A . 
O 5 HOH 138 442 442 HOH HOH A . 
O 5 HOH 139 443 443 HOH HOH A . 
O 5 HOH 140 444 444 HOH HOH A . 
O 5 HOH 141 445 445 HOH HOH A . 
O 5 HOH 142 446 446 HOH HOH A . 
O 5 HOH 143 447 447 HOH HOH A . 
O 5 HOH 144 448 448 HOH HOH A . 
O 5 HOH 145 449 449 HOH HOH A . 
O 5 HOH 146 450 450 HOH HOH A . 
O 5 HOH 147 451 451 HOH HOH A . 
O 5 HOH 148 452 452 HOH HOH A . 
O 5 HOH 149 453 453 HOH HOH A . 
O 5 HOH 150 454 454 HOH HOH A . 
O 5 HOH 151 455 455 HOH HOH A . 
O 5 HOH 152 456 456 HOH HOH A . 
O 5 HOH 153 457 457 HOH HOH A . 
O 5 HOH 154 458 458 HOH HOH A . 
O 5 HOH 155 459 459 HOH HOH A . 
O 5 HOH 156 460 460 HOH HOH A . 
O 5 HOH 157 461 461 HOH HOH A . 
O 5 HOH 158 462 462 HOH HOH A . 
O 5 HOH 159 463 463 HOH HOH A . 
O 5 HOH 160 464 464 HOH HOH A . 
O 5 HOH 161 465 465 HOH HOH A . 
O 5 HOH 162 466 466 HOH HOH A . 
O 5 HOH 163 467 467 HOH HOH A . 
O 5 HOH 164 468 468 HOH HOH A . 
O 5 HOH 165 469 469 HOH HOH A . 
O 5 HOH 166 470 470 HOH HOH A . 
O 5 HOH 167 471 471 HOH HOH A . 
O 5 HOH 168 472 472 HOH HOH A . 
O 5 HOH 169 473 473 HOH HOH A . 
O 5 HOH 170 474 474 HOH HOH A . 
O 5 HOH 171 475 475 HOH HOH A . 
O 5 HOH 172 476 476 HOH HOH A . 
O 5 HOH 173 477 477 HOH HOH A . 
O 5 HOH 174 478 478 HOH HOH A . 
O 5 HOH 175 479 479 HOH HOH A . 
O 5 HOH 176 480 480 HOH HOH A . 
O 5 HOH 177 481 481 HOH HOH A . 
O 5 HOH 178 482 482 HOH HOH A . 
O 5 HOH 179 483 483 HOH HOH A . 
O 5 HOH 180 484 484 HOH HOH A . 
O 5 HOH 181 485 485 HOH HOH A . 
O 5 HOH 182 486 486 HOH HOH A . 
O 5 HOH 183 487 487 HOH HOH A . 
O 5 HOH 184 488 488 HOH HOH A . 
O 5 HOH 185 489 489 HOH HOH A . 
O 5 HOH 186 490 490 HOH HOH A . 
O 5 HOH 187 491 491 HOH HOH A . 
O 5 HOH 188 492 492 HOH HOH A . 
O 5 HOH 189 493 493 HOH HOH A . 
O 5 HOH 190 494 494 HOH HOH A . 
O 5 HOH 191 495 495 HOH HOH A . 
O 5 HOH 192 496 496 HOH HOH A . 
O 5 HOH 193 497 497 HOH HOH A . 
O 5 HOH 194 498 498 HOH HOH A . 
O 5 HOH 195 499 499 HOH HOH A . 
O 5 HOH 196 500 500 HOH HOH A . 
O 5 HOH 197 501 501 HOH HOH A . 
O 5 HOH 198 502 502 HOH HOH A . 
O 5 HOH 199 503 503 HOH HOH A . 
O 5 HOH 200 504 504 HOH HOH A . 
O 5 HOH 201 505 505 HOH HOH A . 
O 5 HOH 202 506 506 HOH HOH A . 
# 
loop_
_software.name 
_software.classification 
_software.version 
_software.citation_id 
_software.pdbx_ordinal 
CrystalClear 'data collection' . ? 1 
CNS          refinement        . ? 2 
CrystalClear 'data reduction'  . ? 3 
d*TREK       'data scaling'    . ? 4 
CNS          phasing           . ? 5 
# 
_cell.entry_id           3GOT 
_cell.length_a           132.455 
_cell.length_b           35.084 
_cell.length_c           41.891 
_cell.angle_alpha        90.00 
_cell.angle_beta         90.10 
_cell.angle_gamma        90.00 
_cell.Z_PDB              4 
_cell.pdbx_unique_axis   ? 
_cell.length_a_esd       ? 
_cell.length_b_esd       ? 
_cell.length_c_esd       ? 
_cell.angle_alpha_esd    ? 
_cell.angle_beta_esd     ? 
_cell.angle_gamma_esd    ? 
# 
_symmetry.entry_id                         3GOT 
_symmetry.space_group_name_H-M             'C 1 2 1' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                5 
_symmetry.space_group_name_Hall            ? 
# 
_exptl.entry_id          3GOT 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   1 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_Matthews      2.26 
_exptl_crystal.density_percent_sol   45.64 
_exptl_crystal.description           ? 
_exptl_crystal.F_000                 ? 
_exptl_crystal.preparation           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          'VAPOR DIFFUSION, HANGING DROP' 
_exptl_crystal_grow.temp            298 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.pH              7.5 
_exptl_crystal_grow.pdbx_details    
;22.5 % PEG 2K, 560 mM ammonium acetate, 12 mM cobalt hexammine, 10 mM K+ HEPES, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
;
_exptl_crystal_grow.pdbx_pH_range   ? 
# 
loop_
_exptl_crystal_grow_comp.crystal_id 
_exptl_crystal_grow_comp.id 
_exptl_crystal_grow_comp.sol_id 
_exptl_crystal_grow_comp.name 
_exptl_crystal_grow_comp.volume 
_exptl_crystal_grow_comp.conc 
_exptl_crystal_grow_comp.details 
1 1 1 'PEG 2K'           ? ? ? 
1 2 1 'ammonium acetate' ? ? ? 
1 3 1 'cobalt hexammine' ? ? ? 
1 4 1 'K+ HEPES'         ? ? ? 
1 5 2 'PEG 2K'           ? ? ? 
1 6 2 'ammonium acetate' ? ? ? 
1 7 2 'cobalt hexammine' ? ? ? 
1 8 2 'K+ HEPES'         ? ? ? 
# 
_diffrn.id                     1 
_diffrn.ambient_temp           100 
_diffrn.ambient_temp_details   ? 
_diffrn.crystal_id             1 
# 
_diffrn_detector.diffrn_id              1 
_diffrn_detector.detector               'IMAGE PLATE' 
_diffrn_detector.type                   'RIGAKU RAXIS IV' 
_diffrn_detector.pdbx_collection_date   2006-02-08 
_diffrn_detector.details                ? 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   M 
_diffrn_radiation.monochromator                    'Ni Filter' 
_diffrn_radiation.pdbx_diffrn_protocol             'SINGLE WAVELENGTH' 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   1.5418 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      'ROTATING ANODE' 
_diffrn_source.type                        RIGAKU 
_diffrn_source.pdbx_synchrotron_site       ? 
_diffrn_source.pdbx_synchrotron_beamline   ? 
_diffrn_source.pdbx_wavelength             ? 
_diffrn_source.pdbx_wavelength_list        1.5418 
# 
_reflns.entry_id                     3GOT 
_reflns.observed_criterion_sigma_I   3.0 
_reflns.observed_criterion_sigma_F   ? 
_reflns.d_resolution_low             20 
_reflns.d_resolution_high            1.95 
_reflns.number_obs                   13662 
_reflns.number_all                   ? 
_reflns.percent_possible_obs         95.6 
_reflns.pdbx_Rmerge_I_obs            ? 
_reflns.pdbx_Rsym_value              0.059 
_reflns.pdbx_netI_over_sigmaI        10.2 
_reflns.B_iso_Wilson_estimate        29.2 
_reflns.pdbx_redundancy              3.58 
_reflns.R_free_details               ? 
_reflns.limit_h_max                  ? 
_reflns.limit_h_min                  ? 
_reflns.limit_k_max                  ? 
_reflns.limit_k_min                  ? 
_reflns.limit_l_max                  ? 
_reflns.limit_l_min                  ? 
_reflns.observed_criterion_F_max     ? 
_reflns.observed_criterion_F_min     ? 
_reflns.pdbx_chi_squared             ? 
_reflns.pdbx_scaling_rejects         ? 
_reflns.pdbx_diffrn_id               1 
_reflns.pdbx_ordinal                 1 
# 
_reflns_shell.d_res_high             1.95 
_reflns_shell.d_res_low              2.02 
_reflns_shell.percent_possible_all   ? 
_reflns_shell.Rmerge_I_obs           ? 
_reflns_shell.pdbx_Rsym_value        0.315 
_reflns_shell.meanI_over_sigI_obs    3.2 
_reflns_shell.pdbx_redundancy        3.21 
_reflns_shell.percent_possible_obs   ? 
_reflns_shell.number_unique_all      1133 
_reflns_shell.number_measured_all    ? 
_reflns_shell.number_measured_obs    ? 
_reflns_shell.number_unique_obs      ? 
_reflns_shell.pdbx_chi_squared       ? 
_reflns_shell.pdbx_diffrn_id         ? 
_reflns_shell.pdbx_ordinal           1 
# 
_refine.entry_id                                 3GOT 
_refine.ls_number_reflns_obs                     13630 
_refine.ls_number_reflns_all                     ? 
_refine.pdbx_ls_sigma_I                          ? 
_refine.pdbx_ls_sigma_F                          0.0 
_refine.pdbx_data_cutoff_high_absF               768357.28 
_refine.pdbx_data_cutoff_low_absF                0.000000 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.ls_d_res_low                             19.98 
_refine.ls_d_res_high                            1.95 
_refine.ls_percent_reflns_obs                    95.2 
_refine.ls_R_factor_obs                          0.218 
_refine.ls_R_factor_all                          ? 
_refine.ls_R_factor_R_work                       0.218 
_refine.ls_R_factor_R_free                       0.268 
_refine.ls_R_factor_R_free_error                 0.008 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_percent_reflns_R_free                 7.5 
_refine.ls_number_reflns_R_free                  1020 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.occupancy_min                            ? 
_refine.occupancy_max                            ? 
_refine.correlation_coeff_Fo_to_Fc               ? 
_refine.correlation_coeff_Fo_to_Fc_free          ? 
_refine.B_iso_mean                               39.8 
_refine.aniso_B[1][1]                            0.87 
_refine.aniso_B[2][2]                            -1.81 
_refine.aniso_B[3][3]                            0.94 
_refine.aniso_B[1][2]                            0.00 
_refine.aniso_B[1][3]                            4.26 
_refine.aniso_B[2][3]                            0.00 
_refine.solvent_model_details                    'FLAT MODEL' 
_refine.solvent_model_param_ksol                 0.45 
_refine.solvent_model_param_bsol                 65.8257 
_refine.pdbx_solvent_vdw_probe_radii             ? 
_refine.pdbx_solvent_ion_probe_radii             ? 
_refine.pdbx_solvent_shrinkage_radii             ? 
_refine.pdbx_ls_cross_valid_method               THROUGHOUT 
_refine.details                                  'BULK SOLVENT MODEL USED' 
_refine.pdbx_starting_model                      ? 
_refine.pdbx_method_to_determine_struct          'MOLECULAR REPLACEMENT' 
_refine.pdbx_isotropic_thermal_model             RESTRAINED 
_refine.pdbx_stereochemistry_target_values       ? 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_R_Free_selection_details            RANDOM 
_refine.pdbx_overall_ESU_R                       ? 
_refine.pdbx_overall_ESU_R_Free                  ? 
_refine.overall_SU_ML                            ? 
_refine.overall_SU_B                             ? 
_refine.ls_redundancy_reflns_obs                 ? 
_refine.B_iso_min                                ? 
_refine.B_iso_max                                ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.overall_SU_R_free                        ? 
_refine.ls_wR_factor_R_free                      ? 
_refine.ls_wR_factor_R_work                      ? 
_refine.overall_FOM_free_R_set                   ? 
_refine.overall_FOM_work_R_set                   ? 
_refine.pdbx_overall_phase_error                 ? 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_analyze.entry_id                        3GOT 
_refine_analyze.Luzzati_coordinate_error_obs    0.29 
_refine_analyze.Luzzati_sigma_a_obs             0.26 
_refine_analyze.Luzzati_d_res_low_obs           5.00 
_refine_analyze.Luzzati_coordinate_error_free   0.39 
_refine_analyze.Luzzati_sigma_a_free            0.26 
_refine_analyze.Luzzati_d_res_low_free          ? 
_refine_analyze.number_disordered_residues      ? 
_refine_analyze.occupancy_sum_hydrogen          ? 
_refine_analyze.occupancy_sum_non_hydrogen      ? 
_refine_analyze.pdbx_Luzzati_d_res_high_obs     ? 
_refine_analyze.pdbx_refine_id                  'X-RAY DIFFRACTION' 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   1422 
_refine_hist.pdbx_number_atoms_ligand         92 
_refine_hist.number_atoms_solvent             202 
_refine_hist.number_atoms_total               1716 
_refine_hist.d_res_high                       1.95 
_refine_hist.d_res_low                        19.98 
# 
loop_
_refine_ls_restr.type 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.weight 
_refine_ls_restr.number 
_refine_ls_restr.pdbx_refine_id 
_refine_ls_restr.pdbx_restraint_function 
c_bond_d                0.013 ? ? ? 'X-RAY DIFFRACTION' ? 
c_bond_d_na             ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_bond_d_prot           ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_angle_d               ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_angle_d_na            ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_angle_d_prot          ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_angle_deg             1.6   ? ? ? 'X-RAY DIFFRACTION' ? 
c_angle_deg_na          ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_angle_deg_prot        ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_dihedral_angle_d      20.7  ? ? ? 'X-RAY DIFFRACTION' ? 
c_dihedral_angle_d_na   ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_dihedral_angle_d_prot ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_improper_angle_d      1.90  ? ? ? 'X-RAY DIFFRACTION' ? 
c_improper_angle_d_na   ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_improper_angle_d_prot ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_mcbond_it             ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_mcangle_it            ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_scbond_it             ?     ? ? ? 'X-RAY DIFFRACTION' ? 
c_scangle_it            ?     ? ? ? 'X-RAY DIFFRACTION' ? 
# 
_refine_ls_shell.pdbx_total_number_of_bins_used   6 
_refine_ls_shell.d_res_high                       1.95 
_refine_ls_shell.d_res_low                        2.07 
_refine_ls_shell.number_reflns_R_work             1858 
_refine_ls_shell.R_factor_R_work                  0.312 
_refine_ls_shell.percent_reflns_obs               85.4 
_refine_ls_shell.R_factor_R_free                  0.350 
_refine_ls_shell.R_factor_R_free_error            0.029 
_refine_ls_shell.percent_reflns_R_free            7.2 
_refine_ls_shell.number_reflns_R_free             144 
_refine_ls_shell.number_reflns_all                ? 
_refine_ls_shell.R_factor_all                     ? 
_refine_ls_shell.number_reflns_obs                ? 
_refine_ls_shell.redundancy_reflns_obs            ? 
_refine_ls_shell.pdbx_refine_id                   'X-RAY DIFFRACTION' 
# 
loop_
_pdbx_xplor_file.serial_no 
_pdbx_xplor_file.param_file 
_pdbx_xplor_file.topol_file 
_pdbx_xplor_file.pdbx_refine_id 
1 cohex_rep.param          water_rep.top          'X-RAY DIFFRACTION' 
2 dna-rna_rep_revise.param dna-rna_rep_revise.top 'X-RAY DIFFRACTION' 
3 2FA.param                acetate.param          'X-RAY DIFFRACTION' 
4 water_rep.param          cohex_rep.top          'X-RAY DIFFRACTION' 
5 acetate.param            2FA.top                'X-RAY DIFFRACTION' 
# 
_database_PDB_matrix.entry_id          3GOT 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_struct.entry_id                  3GOT 
_struct.title                     'Guanine riboswitch C74U mutant bound to 2-fluoroadenine.' 
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        3GOT 
_struct_keywords.pdbx_keywords   RNA 
_struct_keywords.text            
'riboswitch, mRNA, guanine, RNA-ligand complex, double helix, base triple, three-way junction, RNA' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 2 ? 
C N N 3 ? 
D N N 4 ? 
E N N 4 ? 
F N N 4 ? 
G N N 4 ? 
H N N 4 ? 
I N N 4 ? 
J N N 4 ? 
K N N 4 ? 
L N N 4 ? 
M N N 4 ? 
N N N 4 ? 
O N N 5 ? 
# 
_struct_ref.id                         1 
_struct_ref.db_name                    PDB 
_struct_ref.db_code                    3GOT 
_struct_ref.pdbx_db_accession          3GOT 
_struct_ref.entity_id                  1 
_struct_ref.pdbx_align_begin           1 
_struct_ref.pdbx_seq_one_letter_code   GGACAUAUAAUCGCGUGGAUAUGGCACGCAAGUUUCUACCGGGCACCGUAAAUGUCCGAUUAUGUCC 
_struct_ref.pdbx_db_isoform            ? 
# 
_struct_ref_seq.align_id                      1 
_struct_ref_seq.ref_id                        1 
_struct_ref_seq.pdbx_PDB_id_code              3GOT 
_struct_ref_seq.pdbx_strand_id                A 
_struct_ref_seq.seq_align_beg                 1 
_struct_ref_seq.pdbx_seq_align_beg_ins_code   ? 
_struct_ref_seq.seq_align_end                 67 
_struct_ref_seq.pdbx_seq_align_end_ins_code   ? 
_struct_ref_seq.pdbx_db_accession             3GOT 
_struct_ref_seq.db_align_beg                  15 
_struct_ref_seq.pdbx_db_align_beg_ins_code    ? 
_struct_ref_seq.db_align_end                  81 
_struct_ref_seq.pdbx_db_align_end_ins_code    ? 
_struct_ref_seq.pdbx_auth_seq_align_beg       15 
_struct_ref_seq.pdbx_auth_seq_align_end       81 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_defined_assembly 
_pdbx_struct_assembly.method_details       ? 
_pdbx_struct_assembly.oligomeric_details   monomeric 
_pdbx_struct_assembly.oligomeric_count     1 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1 
_pdbx_struct_assembly_gen.asym_id_list      A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
_struct_biol.id        1 
_struct_biol.details   ? 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
hydrog1  hydrog ? ? A G 2  N1 ? ? ? 1_555 A C 66 N3 ? ? A G 16 A C 80 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog2  hydrog ? ? A G 2  N2 ? ? ? 1_555 A C 66 O2 ? ? A G 16 A C 80 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog3  hydrog ? ? A G 2  O6 ? ? ? 1_555 A C 66 N4 ? ? A G 16 A C 80 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog4  hydrog ? ? A A 3  N1 ? ? ? 1_555 A U 65 N3 ? ? A A 17 A U 79 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog5  hydrog ? ? A A 3  N6 ? ? ? 1_555 A U 65 O4 ? ? A A 17 A U 79 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog6  hydrog ? ? A C 4  N3 ? ? ? 1_555 A G 64 N1 ? ? A C 18 A G 78 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog7  hydrog ? ? A C 4  N4 ? ? ? 1_555 A G 64 O6 ? ? A C 18 A G 78 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog8  hydrog ? ? A C 4  O2 ? ? ? 1_555 A G 64 N2 ? ? A C 18 A G 78 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog9  hydrog ? ? A A 5  N1 ? ? ? 1_555 A U 63 N3 ? ? A A 19 A U 77 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog10 hydrog ? ? A A 5  N6 ? ? ? 1_555 A U 63 O4 ? ? A A 19 A U 77 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog11 hydrog ? ? A U 6  N3 ? ? ? 1_555 A A 62 N1 ? ? A U 20 A A 76 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog12 hydrog ? ? A U 6  O4 ? ? ? 1_555 A A 62 N6 ? ? A U 20 A A 76 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog13 hydrog ? ? A A 7  N1 ? ? ? 1_555 A U 61 N3 ? ? A A 21 A U 75 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog14 hydrog ? ? A A 7  N6 ? ? ? 1_555 A U 61 O4 ? ? A A 21 A U 75 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog15 hydrog ? ? A U 8  N3 ? ? ? 1_555 A A 38 N1 ? ? A U 22 A A 52 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog16 hydrog ? ? A U 8  O4 ? ? ? 1_555 A A 38 N6 ? ? A U 22 A A 52 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog17 hydrog ? ? A A 9  N1 ? ? ? 1_555 A G 32 N2 ? ? A A 23 A G 46 1_555 ? ? ? ? ? ? TYPE_10_PAIR         ? ? ? 
hydrog18 hydrog ? ? A A 9  N6 ? ? ? 1_555 A G 32 N3 ? ? A A 23 A G 46 1_555 ? ? ? ? ? ? TYPE_10_PAIR         ? ? ? 
hydrog19 hydrog ? ? A U 11 N3 ? ? ? 1_555 A A 31 N1 ? ? A U 25 A A 45 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog20 hydrog ? ? A U 11 O4 ? ? ? 1_555 A A 31 N6 ? ? A U 25 A A 45 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog21 hydrog ? ? A G 13 N1 ? ? ? 1_555 A C 29 N3 ? ? A G 27 A C 43 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog22 hydrog ? ? A G 13 N2 ? ? ? 1_555 A C 29 O2 ? ? A G 27 A C 43 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog23 hydrog ? ? A G 13 O6 ? ? ? 1_555 A C 29 N4 ? ? A G 27 A C 43 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog24 hydrog ? ? A C 14 N3 ? ? ? 1_555 A G 28 N1 ? ? A C 28 A G 42 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog25 hydrog ? ? A C 14 N4 ? ? ? 1_555 A G 28 O6 ? ? A C 28 A G 42 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog26 hydrog ? ? A C 14 O2 ? ? ? 1_555 A G 28 N2 ? ? A C 28 A G 42 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog27 hydrog ? ? A G 15 N1 ? ? ? 1_555 A C 27 N3 ? ? A G 29 A C 41 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog28 hydrog ? ? A G 15 N2 ? ? ? 1_555 A C 27 O2 ? ? A G 29 A C 41 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog29 hydrog ? ? A G 15 O6 ? ? ? 1_555 A C 27 N4 ? ? A G 29 A C 41 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog30 hydrog ? ? A U 16 N3 ? ? ? 1_555 A A 26 N1 ? ? A U 30 A A 40 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog31 hydrog ? ? A U 16 O4 ? ? ? 1_555 A A 26 N6 ? ? A U 30 A A 40 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog32 hydrog ? ? A G 17 N1 ? ? ? 1_555 A C 25 N3 ? ? A G 31 A C 39 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog33 hydrog ? ? A G 17 N2 ? ? ? 1_555 A C 25 O2 ? ? A G 31 A C 39 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog34 hydrog ? ? A G 17 O6 ? ? ? 1_555 A C 25 N4 ? ? A G 31 A C 39 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog35 hydrog ? ? A A 19 N1 ? ? ? 1_555 A A 52 N6 ? ? A A 33 A A 66 1_555 ? ? ? ? ? ? TYPE_5_PAIR          ? ? ? 
hydrog36 hydrog ? ? A A 19 N6 ? ? ? 1_555 A A 52 N7 ? ? A A 33 A A 66 1_555 ? ? ? ? ? ? TYPE_5_PAIR          ? ? ? 
hydrog37 hydrog ? ? A U 20 N3 ? ? ? 1_555 A A 51 N7 ? ? A U 34 A A 65 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? 
hydrog38 hydrog ? ? A U 20 O2 ? ? ? 1_555 A A 51 N6 ? ? A U 34 A A 65 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? 
hydrog39 hydrog ? ? A A 21 N6 ? ? ? 1_555 A A 50 N1 ? ? A A 35 A A 64 1_555 ? ? ? ? ? ? TYPE_5_PAIR          ? ? ? 
hydrog40 hydrog ? ? A A 21 N7 ? ? ? 1_555 A A 50 N6 ? ? A A 35 A A 64 1_555 ? ? ? ? ? ? TYPE_5_PAIR          ? ? ? 
hydrog41 hydrog ? ? A G 23 N1 ? ? ? 1_555 A C 47 N3 ? ? A G 37 A C 61 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog42 hydrog ? ? A G 23 N2 ? ? ? 1_555 A C 47 O2 ? ? A G 37 A C 61 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog43 hydrog ? ? A G 23 O6 ? ? ? 1_555 A C 47 N4 ? ? A G 37 A C 61 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog44 hydrog ? ? A G 24 N1 ? ? ? 1_555 A C 46 N3 ? ? A G 38 A C 60 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog45 hydrog ? ? A G 24 N2 ? ? ? 1_555 A C 46 O2 ? ? A G 38 A C 60 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog46 hydrog ? ? A G 24 O6 ? ? ? 1_555 A C 46 N4 ? ? A G 38 A C 60 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog47 hydrog ? ? A G 24 N2 ? ? ? 1_555 A A 52 N1 ? ? A G 38 A A 66 1_555 ? ? ? ? ? ? TYPE_10_PAIR         ? ? ? 
hydrog48 hydrog ? ? A G 24 N3 ? ? ? 1_555 A A 52 N6 ? ? A G 38 A A 66 1_555 ? ? ? ? ? ? TYPE_10_PAIR         ? ? ? 
hydrog49 hydrog ? ? A G 32 N1 ? ? ? 1_555 A C 39 N3 ? ? A G 46 A C 53 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog50 hydrog ? ? A G 32 N2 ? ? ? 1_555 A C 39 O2 ? ? A G 46 A C 53 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog51 hydrog ? ? A G 32 O6 ? ? ? 1_555 A C 39 N4 ? ? A G 46 A C 53 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog52 hydrog ? ? A U 33 N3 ? ? ? 1_555 A U 37 O4 ? ? A U 47 A U 51 1_555 ? ? ? ? ? ? 'U-U MISPAIR'        ? ? ? 
hydrog53 hydrog ? ? A U 35 N3 ? ? ? 1_555 A A 62 N3 ? ? A U 49 A A 76 1_555 ? ? ? ? ? ? 'U-A PAIR'           ? ? ? 
hydrog54 hydrog ? ? A C 36 N4 ? ? ? 1_555 A U 61 O2 ? ? A C 50 A U 75 1_555 ? ? ? ? ? ? 'C-U MISPAIR'        ? ? ? 
hydrog55 hydrog ? ? A C 40 N3 ? ? ? 1_555 A G 58 N1 ? ? A C 54 A G 72 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog56 hydrog ? ? A C 40 N4 ? ? ? 1_555 A G 58 O6 ? ? A C 54 A G 72 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog57 hydrog ? ? A C 40 O2 ? ? ? 1_555 A G 58 N2 ? ? A C 54 A G 72 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog58 hydrog ? ? A G 41 N1 ? ? ? 1_555 A C 57 N3 ? ? A G 55 A C 71 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog59 hydrog ? ? A G 41 N2 ? ? ? 1_555 A C 57 O2 ? ? A G 55 A C 71 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog60 hydrog ? ? A G 41 O6 ? ? ? 1_555 A C 57 N4 ? ? A G 55 A C 71 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog61 hydrog ? ? A G 42 N1 ? ? ? 1_555 A C 56 N3 ? ? A G 56 A C 70 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog62 hydrog ? ? A G 42 N2 ? ? ? 1_555 A C 56 O2 ? ? A G 56 A C 70 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog63 hydrog ? ? A G 42 O6 ? ? ? 1_555 A C 56 N4 ? ? A G 56 A C 70 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog64 hydrog ? ? A G 43 N1 ? ? ? 1_555 A U 55 O2 ? ? A G 57 A U 69 1_555 ? ? ? ? ? ? TYPE_28_PAIR         ? ? ? 
hydrog65 hydrog ? ? A G 43 O6 ? ? ? 1_555 A U 55 N3 ? ? A G 57 A U 69 1_555 ? ? ? ? ? ? TYPE_28_PAIR         ? ? ? 
hydrog66 hydrog ? ? A C 44 N3 ? ? ? 1_555 A G 54 N1 ? ? A C 58 A G 68 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog67 hydrog ? ? A C 44 N4 ? ? ? 1_555 A G 54 O6 ? ? A C 58 A G 68 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog68 hydrog ? ? A C 44 O2 ? ? ? 1_555 A G 54 N2 ? ? A C 58 A G 68 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog69 hydrog ? ? A A 45 N1 ? ? ? 1_555 A U 53 N3 ? ? A A 59 A U 67 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog70 hydrog ? ? A A 45 N6 ? ? ? 1_555 A U 53 O4 ? ? A A 59 A U 67 1_555 ? ? ? ? ? ? WATSON-CRICK         ? ? ? 
hydrog71 hydrog ? ? A C 47 O2 ? ? ? 1_555 A A 51 N6 ? ? A C 61 A A 65 1_555 ? ? ? ? ? ? 'C-A MISPAIR'        ? ? ? 
hydrog72 hydrog ? ? A G 48 N2 ? ? ? 1_555 A U 49 O4 ? ? A G 62 A U 63 1_555 ? ? ? ? ? ? 'G-U MISPAIR'        ? ? ? 
# 
_struct_conn_type.id          hydrog 
_struct_conn_type.criteria    ? 
_struct_conn_type.reference   ? 
# 
loop_
_struct_site.id 
_struct_site.pdbx_evidence_code 
_struct_site.pdbx_auth_asym_id 
_struct_site.pdbx_auth_comp_id 
_struct_site.pdbx_auth_seq_id 
_struct_site.pdbx_auth_ins_code 
_struct_site.pdbx_num_residues 
_struct_site.details 
AC1 Software A A2F 91  ? 9  'BINDING SITE FOR RESIDUE A2F A 91'  
AC2 Software A ACT 96  ? 5  'BINDING SITE FOR RESIDUE ACT A 96'  
AC3 Software A NCO 101 ? 9  'BINDING SITE FOR RESIDUE NCO A 101' 
AC4 Software A NCO 102 ? 11 'BINDING SITE FOR RESIDUE NCO A 102' 
AC5 Software A NCO 103 ? 11 'BINDING SITE FOR RESIDUE NCO A 103' 
AC6 Software A NCO 104 ? 9  'BINDING SITE FOR RESIDUE NCO A 104' 
AC7 Software A NCO 105 ? 6  'BINDING SITE FOR RESIDUE NCO A 105' 
AC8 Software A NCO 106 ? 12 'BINDING SITE FOR RESIDUE NCO A 106' 
AC9 Software A NCO 107 ? 6  'BINDING SITE FOR RESIDUE NCO A 107' 
BC1 Software A NCO 108 ? 5  'BINDING SITE FOR RESIDUE NCO A 108' 
BC2 Software A NCO 109 ? 5  'BINDING SITE FOR RESIDUE NCO A 109' 
BC3 Software A NCO 111 ? 7  'BINDING SITE FOR RESIDUE NCO A 111' 
BC4 Software A NCO 112 ? 6  'BINDING SITE FOR RESIDUE NCO A 112' 
# 
loop_
_struct_site_gen.id 
_struct_site_gen.site_id 
_struct_site_gen.pdbx_num_res 
_struct_site_gen.label_comp_id 
_struct_site_gen.label_asym_id 
_struct_site_gen.label_seq_id 
_struct_site_gen.pdbx_auth_ins_code 
_struct_site_gen.auth_comp_id 
_struct_site_gen.auth_asym_id 
_struct_site_gen.auth_seq_id 
_struct_site_gen.label_atom_id 
_struct_site_gen.label_alt_id 
_struct_site_gen.symmetry 
_struct_site_gen.details 
1   AC1 9  A   A 7  ? A   A 21  . ? 1_555 ? 
2   AC1 9  U   A 8  ? U   A 22  . ? 1_555 ? 
3   AC1 9  U   A 33 ? U   A 47  . ? 1_555 ? 
4   AC1 9  U   A 37 ? U   A 51  . ? 1_555 ? 
5   AC1 9  A   A 38 ? A   A 52  . ? 1_555 ? 
6   AC1 9  A   A 59 ? A   A 73  . ? 1_555 ? 
7   AC1 9  U   A 60 ? U   A 74  . ? 1_555 ? 
8   AC1 9  U   A 61 ? U   A 75  . ? 1_555 ? 
9   AC1 9  HOH O .  ? HOH A 452 . ? 1_555 ? 
10  AC2 5  G   A 18 ? G   A 32  . ? 1_555 ? 
11  AC2 5  A   A 19 ? A   A 33  . ? 1_555 ? 
12  AC2 5  G   A 24 ? G   A 38  . ? 1_555 ? 
13  AC2 5  C   A 25 ? C   A 39  . ? 1_555 ? 
14  AC2 5  U   A 53 ? U   A 67  . ? 1_555 ? 
15  AC3 9  G   A 15 ? G   A 29  . ? 4_455 ? 
16  AC3 9  U   A 16 ? U   A 30  . ? 4_455 ? 
17  AC3 9  A   A 52 ? A   A 66  . ? 1_555 ? 
18  AC3 9  U   A 53 ? U   A 67  . ? 1_555 ? 
19  AC3 9  HOH O .  ? HOH A 328 . ? 1_555 ? 
20  AC3 9  HOH O .  ? HOH A 332 . ? 1_555 ? 
21  AC3 9  HOH O .  ? HOH A 437 . ? 4_445 ? 
22  AC3 9  HOH O .  ? HOH A 465 . ? 4_445 ? 
23  AC3 9  HOH O .  ? HOH A 473 . ? 4_445 ? 
24  AC4 11 G   A 24 ? G   A 38  . ? 1_555 ? 
25  AC4 11 C   A 25 ? C   A 39  . ? 1_555 ? 
26  AC4 11 G   A 42 ? G   A 56  . ? 1_555 ? 
27  AC4 11 G   A 43 ? G   A 57  . ? 4_446 ? 
28  AC4 11 C   A 44 ? C   A 58  . ? 4_446 ? 
29  AC4 11 HOH O .  ? HOH A 310 . ? 1_555 ? 
30  AC4 11 HOH O .  ? HOH A 396 . ? 1_555 ? 
31  AC4 11 HOH O .  ? HOH A 424 . ? 4_456 ? 
32  AC4 11 HOH O .  ? HOH A 431 . ? 1_555 ? 
33  AC4 11 HOH O .  ? HOH A 441 . ? 1_555 ? 
34  AC4 11 HOH O .  ? HOH A 451 . ? 1_555 ? 
35  AC5 11 C   A 25 ? C   A 39  . ? 1_555 ? 
36  AC5 11 G   A 41 ? G   A 55  . ? 1_555 ? 
37  AC5 11 G   A 42 ? G   A 56  . ? 1_555 ? 
38  AC5 11 G   A 43 ? G   A 57  . ? 1_555 ? 
39  AC5 11 G   A 54 ? G   A 68  . ? 1_555 ? 
40  AC5 11 U   A 55 ? U   A 69  . ? 1_555 ? 
41  AC5 11 HOH O .  ? HOH A 309 . ? 1_555 ? 
42  AC5 11 HOH O .  ? HOH A 390 . ? 1_555 ? 
43  AC5 11 HOH O .  ? HOH A 446 . ? 1_555 ? 
44  AC5 11 HOH O .  ? HOH A 474 . ? 1_555 ? 
45  AC5 11 HOH O .  ? HOH A 500 . ? 1_555 ? 
46  AC6 9  U   A 16 ? U   A 30  . ? 1_555 ? 
47  AC6 9  G   A 17 ? G   A 31  . ? 1_555 ? 
48  AC6 9  G   A 18 ? G   A 32  . ? 1_555 ? 
49  AC6 9  A   A 51 ? A   A 65  . ? 1_555 ? 
50  AC6 9  A   A 52 ? A   A 66  . ? 1_555 ? 
51  AC6 9  NCO I .  ? NCO A 106 . ? 4_445 ? 
52  AC6 9  HOH O .  ? HOH A 306 . ? 1_555 ? 
53  AC6 9  HOH O .  ? HOH A 326 . ? 4_445 ? 
54  AC6 9  HOH O .  ? HOH A 408 . ? 1_555 ? 
55  AC7 6  G   A 23 ? G   A 37  . ? 1_555 ? 
56  AC7 6  G   A 24 ? G   A 38  . ? 1_555 ? 
57  AC7 6  HOH O .  ? HOH A 312 . ? 1_555 ? 
58  AC7 6  HOH O .  ? HOH A 370 . ? 1_555 ? 
59  AC7 6  HOH O .  ? HOH A 450 . ? 1_555 ? 
60  AC7 6  HOH O .  ? HOH A 459 . ? 1_555 ? 
61  AC8 12 C   A 12 ? C   A 26  . ? 1_555 ? 
62  AC8 12 G   A 15 ? G   A 29  . ? 4_455 ? 
63  AC8 12 U   A 16 ? U   A 30  . ? 4_455 ? 
64  AC8 12 A   A 52 ? A   A 66  . ? 4_455 ? 
65  AC8 12 NCO G .  ? NCO A 104 . ? 4_455 ? 
66  AC8 12 HOH O .  ? HOH A 321 . ? 1_555 ? 
67  AC8 12 HOH O .  ? HOH A 326 . ? 1_555 ? 
68  AC8 12 HOH O .  ? HOH A 342 . ? 1_555 ? 
69  AC8 12 HOH O .  ? HOH A 373 . ? 1_555 ? 
70  AC8 12 HOH O .  ? HOH A 389 . ? 1_555 ? 
71  AC8 12 HOH O .  ? HOH A 462 . ? 1_555 ? 
72  AC8 12 HOH O .  ? HOH A 485 . ? 1_555 ? 
73  AC9 6  C   A 27 ? C   A 41  . ? 1_555 ? 
74  AC9 6  G   A 28 ? G   A 42  . ? 1_555 ? 
75  AC9 6  C   A 39 ? C   A 53  . ? 1_555 ? 
76  AC9 6  C   A 40 ? C   A 54  . ? 1_555 ? 
77  AC9 6  HOH O .  ? HOH A 314 . ? 1_555 ? 
78  AC9 6  HOH O .  ? HOH A 351 . ? 1_555 ? 
79  BC1 5  G   A 32 ? G   A 46  . ? 1_555 ? 
80  BC1 5  U   A 33 ? U   A 47  . ? 1_555 ? 
81  BC1 5  C   A 36 ? C   A 50  . ? 1_555 ? 
82  BC1 5  U   A 37 ? U   A 51  . ? 1_555 ? 
83  BC1 5  HOH O .  ? HOH A 445 . ? 1_555 ? 
84  BC2 5  A   A 10 ? A   A 24  . ? 1_555 ? 
85  BC2 5  C   A 57 ? C   A 71  . ? 1_555 ? 
86  BC2 5  HOH O .  ? HOH A 315 . ? 1_555 ? 
87  BC2 5  HOH O .  ? HOH A 357 . ? 1_555 ? 
88  BC2 5  HOH O .  ? HOH A 419 . ? 1_555 ? 
89  BC3 7  G   A 18 ? G   A 32  . ? 1_555 ? 
90  BC3 7  A   A 19 ? A   A 33  . ? 1_555 ? 
91  BC3 7  HOH O .  ? HOH A 364 . ? 1_555 ? 
92  BC3 7  HOH O .  ? HOH A 387 . ? 1_555 ? 
93  BC3 7  HOH O .  ? HOH A 429 . ? 1_555 ? 
94  BC3 7  HOH O .  ? HOH A 496 . ? 1_555 ? 
95  BC3 7  HOH O .  ? HOH A 502 . ? 1_555 ? 
96  BC4 6  U   A 22 ? U   A 36  . ? 4_456 ? 
97  BC4 6  G   A 28 ? G   A 42  . ? 1_565 ? 
98  BC4 6  C   A 29 ? C   A 43  . ? 1_565 ? 
99  BC4 6  G   A 58 ? G   A 72  . ? 1_555 ? 
100 BC4 6  A   A 59 ? A   A 73  . ? 1_555 ? 
101 BC4 6  HOH O .  ? HOH A 464 . ? 1_565 ? 
# 
_pdbx_validate_rmsd_bond.id                        1 
_pdbx_validate_rmsd_bond.PDB_model_num             1 
_pdbx_validate_rmsd_bond.auth_atom_id_1            N1 
_pdbx_validate_rmsd_bond.auth_asym_id_1            A 
_pdbx_validate_rmsd_bond.auth_comp_id_1            U 
_pdbx_validate_rmsd_bond.auth_seq_id_1             36 
_pdbx_validate_rmsd_bond.PDB_ins_code_1            ? 
_pdbx_validate_rmsd_bond.label_alt_id_1            ? 
_pdbx_validate_rmsd_bond.auth_atom_id_2            C2 
_pdbx_validate_rmsd_bond.auth_asym_id_2            A 
_pdbx_validate_rmsd_bond.auth_comp_id_2            U 
_pdbx_validate_rmsd_bond.auth_seq_id_2             36 
_pdbx_validate_rmsd_bond.PDB_ins_code_2            ? 
_pdbx_validate_rmsd_bond.label_alt_id_2            ? 
_pdbx_validate_rmsd_bond.bond_value                1.437 
_pdbx_validate_rmsd_bond.bond_target_value         1.381 
_pdbx_validate_rmsd_bond.bond_deviation            0.056 
_pdbx_validate_rmsd_bond.bond_standard_deviation   0.009 
_pdbx_validate_rmsd_bond.linker_flag               N 
# 
loop_
_pdbx_validate_rmsd_angle.id 
_pdbx_validate_rmsd_angle.PDB_model_num 
_pdbx_validate_rmsd_angle.auth_atom_id_1 
_pdbx_validate_rmsd_angle.auth_asym_id_1 
_pdbx_validate_rmsd_angle.auth_comp_id_1 
_pdbx_validate_rmsd_angle.auth_seq_id_1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1 
_pdbx_validate_rmsd_angle.label_alt_id_1 
_pdbx_validate_rmsd_angle.auth_atom_id_2 
_pdbx_validate_rmsd_angle.auth_asym_id_2 
_pdbx_validate_rmsd_angle.auth_comp_id_2 
_pdbx_validate_rmsd_angle.auth_seq_id_2 
_pdbx_validate_rmsd_angle.PDB_ins_code_2 
_pdbx_validate_rmsd_angle.label_alt_id_2 
_pdbx_validate_rmsd_angle.auth_atom_id_3 
_pdbx_validate_rmsd_angle.auth_asym_id_3 
_pdbx_validate_rmsd_angle.auth_comp_id_3 
_pdbx_validate_rmsd_angle.auth_seq_id_3 
_pdbx_validate_rmsd_angle.PDB_ins_code_3 
_pdbx_validate_rmsd_angle.label_alt_id_3 
_pdbx_validate_rmsd_angle.angle_value 
_pdbx_validate_rmsd_angle.angle_target_value 
_pdbx_validate_rmsd_angle.angle_deviation 
_pdbx_validate_rmsd_angle.angle_standard_deviation 
_pdbx_validate_rmsd_angle.linker_flag 
1 1 "O5'" A U 25 ? ? P     A U 25 ? ? OP2   A U 25 ? ? 100.25 105.70 -5.45  0.90 N 
2 1 "O5'" A C 39 ? ? P     A C 39 ? ? OP2   A C 39 ? ? 93.52  105.70 -12.18 0.90 N 
3 1 "C5'" A C 39 ? ? "C4'" A C 39 ? ? "C3'" A C 39 ? ? 128.65 116.00 12.65  1.60 N 
4 1 "C5'" A C 54 ? ? "C4'" A C 54 ? ? "C3'" A C 54 ? ? 131.06 116.00 15.06  1.60 N 
# 
loop_
_pdbx_validate_planes.id 
_pdbx_validate_planes.PDB_model_num 
_pdbx_validate_planes.auth_comp_id 
_pdbx_validate_planes.auth_asym_id 
_pdbx_validate_planes.auth_seq_id 
_pdbx_validate_planes.PDB_ins_code 
_pdbx_validate_planes.label_alt_id 
_pdbx_validate_planes.rmsd 
_pdbx_validate_planes.type 
1 1 U A 34 ? ? 0.102 'SIDE CHAIN' 
2 1 G A 38 ? ? 0.076 'SIDE CHAIN' 
3 1 G A 55 ? ? 0.051 'SIDE CHAIN' 
4 1 A A 64 ? ? 0.060 'SIDE CHAIN' 
5 1 C A 70 ? ? 0.067 'SIDE CHAIN' 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
A   OP3    O  N N 1   
A   P      P  N N 2   
A   OP1    O  N N 3   
A   OP2    O  N N 4   
A   "O5'"  O  N N 5   
A   "C5'"  C  N N 6   
A   "C4'"  C  N R 7   
A   "O4'"  O  N N 8   
A   "C3'"  C  N S 9   
A   "O3'"  O  N N 10  
A   "C2'"  C  N R 11  
A   "O2'"  O  N N 12  
A   "C1'"  C  N R 13  
A   N9     N  Y N 14  
A   C8     C  Y N 15  
A   N7     N  Y N 16  
A   C5     C  Y N 17  
A   C6     C  Y N 18  
A   N6     N  N N 19  
A   N1     N  Y N 20  
A   C2     C  Y N 21  
A   N3     N  Y N 22  
A   C4     C  Y N 23  
A   HOP3   H  N N 24  
A   HOP2   H  N N 25  
A   "H5'"  H  N N 26  
A   "H5''" H  N N 27  
A   "H4'"  H  N N 28  
A   "H3'"  H  N N 29  
A   "HO3'" H  N N 30  
A   "H2'"  H  N N 31  
A   "HO2'" H  N N 32  
A   "H1'"  H  N N 33  
A   H8     H  N N 34  
A   H61    H  N N 35  
A   H62    H  N N 36  
A   H2     H  N N 37  
A2F F      F  N N 38  
A2F C2     C  Y N 39  
A2F N3     N  Y N 40  
A2F N1     N  Y N 41  
A2F C6     C  Y N 42  
A2F N6     N  N N 43  
A2F C5     C  Y N 44  
A2F C4     C  Y N 45  
A2F N7     N  Y N 46  
A2F C8     C  Y N 47  
A2F N9     N  Y N 48  
A2F HN6    H  N N 49  
A2F HN6A   H  N N 50  
A2F H8     H  N N 51  
A2F HN7    H  N N 52  
ACT C      C  N N 53  
ACT O      O  N N 54  
ACT OXT    O  N N 55  
ACT CH3    C  N N 56  
ACT H1     H  N N 57  
ACT H2     H  N N 58  
ACT H3     H  N N 59  
C   OP3    O  N N 60  
C   P      P  N N 61  
C   OP1    O  N N 62  
C   OP2    O  N N 63  
C   "O5'"  O  N N 64  
C   "C5'"  C  N N 65  
C   "C4'"  C  N R 66  
C   "O4'"  O  N N 67  
C   "C3'"  C  N S 68  
C   "O3'"  O  N N 69  
C   "C2'"  C  N R 70  
C   "O2'"  O  N N 71  
C   "C1'"  C  N R 72  
C   N1     N  N N 73  
C   C2     C  N N 74  
C   O2     O  N N 75  
C   N3     N  N N 76  
C   C4     C  N N 77  
C   N4     N  N N 78  
C   C5     C  N N 79  
C   C6     C  N N 80  
C   HOP3   H  N N 81  
C   HOP2   H  N N 82  
C   "H5'"  H  N N 83  
C   "H5''" H  N N 84  
C   "H4'"  H  N N 85  
C   "H3'"  H  N N 86  
C   "HO3'" H  N N 87  
C   "H2'"  H  N N 88  
C   "HO2'" H  N N 89  
C   "H1'"  H  N N 90  
C   H41    H  N N 91  
C   H42    H  N N 92  
C   H5     H  N N 93  
C   H6     H  N N 94  
G   OP3    O  N N 95  
G   P      P  N N 96  
G   OP1    O  N N 97  
G   OP2    O  N N 98  
G   "O5'"  O  N N 99  
G   "C5'"  C  N N 100 
G   "C4'"  C  N R 101 
G   "O4'"  O  N N 102 
G   "C3'"  C  N S 103 
G   "O3'"  O  N N 104 
G   "C2'"  C  N R 105 
G   "O2'"  O  N N 106 
G   "C1'"  C  N R 107 
G   N9     N  Y N 108 
G   C8     C  Y N 109 
G   N7     N  Y N 110 
G   C5     C  Y N 111 
G   C6     C  N N 112 
G   O6     O  N N 113 
G   N1     N  N N 114 
G   C2     C  N N 115 
G   N2     N  N N 116 
G   N3     N  N N 117 
G   C4     C  Y N 118 
G   HOP3   H  N N 119 
G   HOP2   H  N N 120 
G   "H5'"  H  N N 121 
G   "H5''" H  N N 122 
G   "H4'"  H  N N 123 
G   "H3'"  H  N N 124 
G   "HO3'" H  N N 125 
G   "H2'"  H  N N 126 
G   "HO2'" H  N N 127 
G   "H1'"  H  N N 128 
G   H8     H  N N 129 
G   H1     H  N N 130 
G   H21    H  N N 131 
G   H22    H  N N 132 
HOH O      O  N N 133 
HOH H1     H  N N 134 
HOH H2     H  N N 135 
NCO CO     CO N N 136 
NCO N1     N  N N 137 
NCO N2     N  N N 138 
NCO N3     N  N N 139 
NCO N4     N  N N 140 
NCO N5     N  N N 141 
NCO N6     N  N N 142 
NCO HN11   H  N N 143 
NCO HN12   H  N N 144 
NCO HN13   H  N N 145 
NCO HN21   H  N N 146 
NCO HN22   H  N N 147 
NCO HN23   H  N N 148 
NCO HN31   H  N N 149 
NCO HN32   H  N N 150 
NCO HN33   H  N N 151 
NCO HN41   H  N N 152 
NCO HN42   H  N N 153 
NCO HN43   H  N N 154 
NCO HN51   H  N N 155 
NCO HN52   H  N N 156 
NCO HN53   H  N N 157 
NCO HN61   H  N N 158 
NCO HN62   H  N N 159 
NCO HN63   H  N N 160 
U   OP3    O  N N 161 
U   P      P  N N 162 
U   OP1    O  N N 163 
U   OP2    O  N N 164 
U   "O5'"  O  N N 165 
U   "C5'"  C  N N 166 
U   "C4'"  C  N R 167 
U   "O4'"  O  N N 168 
U   "C3'"  C  N S 169 
U   "O3'"  O  N N 170 
U   "C2'"  C  N R 171 
U   "O2'"  O  N N 172 
U   "C1'"  C  N R 173 
U   N1     N  N N 174 
U   C2     C  N N 175 
U   O2     O  N N 176 
U   N3     N  N N 177 
U   C4     C  N N 178 
U   O4     O  N N 179 
U   C5     C  N N 180 
U   C6     C  N N 181 
U   HOP3   H  N N 182 
U   HOP2   H  N N 183 
U   "H5'"  H  N N 184 
U   "H5''" H  N N 185 
U   "H4'"  H  N N 186 
U   "H3'"  H  N N 187 
U   "HO3'" H  N N 188 
U   "H2'"  H  N N 189 
U   "HO2'" H  N N 190 
U   "H1'"  H  N N 191 
U   H3     H  N N 192 
U   H5     H  N N 193 
U   H6     H  N N 194 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A   OP3   P      sing N N 1   
A   OP3   HOP3   sing N N 2   
A   P     OP1    doub N N 3   
A   P     OP2    sing N N 4   
A   P     "O5'"  sing N N 5   
A   OP2   HOP2   sing N N 6   
A   "O5'" "C5'"  sing N N 7   
A   "C5'" "C4'"  sing N N 8   
A   "C5'" "H5'"  sing N N 9   
A   "C5'" "H5''" sing N N 10  
A   "C4'" "O4'"  sing N N 11  
A   "C4'" "C3'"  sing N N 12  
A   "C4'" "H4'"  sing N N 13  
A   "O4'" "C1'"  sing N N 14  
A   "C3'" "O3'"  sing N N 15  
A   "C3'" "C2'"  sing N N 16  
A   "C3'" "H3'"  sing N N 17  
A   "O3'" "HO3'" sing N N 18  
A   "C2'" "O2'"  sing N N 19  
A   "C2'" "C1'"  sing N N 20  
A   "C2'" "H2'"  sing N N 21  
A   "O2'" "HO2'" sing N N 22  
A   "C1'" N9     sing N N 23  
A   "C1'" "H1'"  sing N N 24  
A   N9    C8     sing Y N 25  
A   N9    C4     sing Y N 26  
A   C8    N7     doub Y N 27  
A   C8    H8     sing N N 28  
A   N7    C5     sing Y N 29  
A   C5    C6     sing Y N 30  
A   C5    C4     doub Y N 31  
A   C6    N6     sing N N 32  
A   C6    N1     doub Y N 33  
A   N6    H61    sing N N 34  
A   N6    H62    sing N N 35  
A   N1    C2     sing Y N 36  
A   C2    N3     doub Y N 37  
A   C2    H2     sing N N 38  
A   N3    C4     sing Y N 39  
A2F C2    F      sing N N 40  
A2F N1    C2     doub Y N 41  
A2F C2    N3     sing Y N 42  
A2F C4    N3     doub Y N 43  
A2F C6    N1     sing Y N 44  
A2F N6    C6     sing N N 45  
A2F C6    C5     doub Y N 46  
A2F N6    HN6    sing N N 47  
A2F N6    HN6A   sing N N 48  
A2F N7    C5     sing Y N 49  
A2F C5    C4     sing Y N 50  
A2F N9    C4     sing Y N 51  
A2F N7    C8     sing Y N 52  
A2F C8    N9     doub Y N 53  
A2F C8    H8     sing N N 54  
A2F N7    HN7    sing N N 55  
ACT C     O      doub N N 56  
ACT C     OXT    sing N N 57  
ACT C     CH3    sing N N 58  
ACT CH3   H1     sing N N 59  
ACT CH3   H2     sing N N 60  
ACT CH3   H3     sing N N 61  
C   OP3   P      sing N N 62  
C   OP3   HOP3   sing N N 63  
C   P     OP1    doub N N 64  
C   P     OP2    sing N N 65  
C   P     "O5'"  sing N N 66  
C   OP2   HOP2   sing N N 67  
C   "O5'" "C5'"  sing N N 68  
C   "C5'" "C4'"  sing N N 69  
C   "C5'" "H5'"  sing N N 70  
C   "C5'" "H5''" sing N N 71  
C   "C4'" "O4'"  sing N N 72  
C   "C4'" "C3'"  sing N N 73  
C   "C4'" "H4'"  sing N N 74  
C   "O4'" "C1'"  sing N N 75  
C   "C3'" "O3'"  sing N N 76  
C   "C3'" "C2'"  sing N N 77  
C   "C3'" "H3'"  sing N N 78  
C   "O3'" "HO3'" sing N N 79  
C   "C2'" "O2'"  sing N N 80  
C   "C2'" "C1'"  sing N N 81  
C   "C2'" "H2'"  sing N N 82  
C   "O2'" "HO2'" sing N N 83  
C   "C1'" N1     sing N N 84  
C   "C1'" "H1'"  sing N N 85  
C   N1    C2     sing N N 86  
C   N1    C6     sing N N 87  
C   C2    O2     doub N N 88  
C   C2    N3     sing N N 89  
C   N3    C4     doub N N 90  
C   C4    N4     sing N N 91  
C   C4    C5     sing N N 92  
C   N4    H41    sing N N 93  
C   N4    H42    sing N N 94  
C   C5    C6     doub N N 95  
C   C5    H5     sing N N 96  
C   C6    H6     sing N N 97  
G   OP3   P      sing N N 98  
G   OP3   HOP3   sing N N 99  
G   P     OP1    doub N N 100 
G   P     OP2    sing N N 101 
G   P     "O5'"  sing N N 102 
G   OP2   HOP2   sing N N 103 
G   "O5'" "C5'"  sing N N 104 
G   "C5'" "C4'"  sing N N 105 
G   "C5'" "H5'"  sing N N 106 
G   "C5'" "H5''" sing N N 107 
G   "C4'" "O4'"  sing N N 108 
G   "C4'" "C3'"  sing N N 109 
G   "C4'" "H4'"  sing N N 110 
G   "O4'" "C1'"  sing N N 111 
G   "C3'" "O3'"  sing N N 112 
G   "C3'" "C2'"  sing N N 113 
G   "C3'" "H3'"  sing N N 114 
G   "O3'" "HO3'" sing N N 115 
G   "C2'" "O2'"  sing N N 116 
G   "C2'" "C1'"  sing N N 117 
G   "C2'" "H2'"  sing N N 118 
G   "O2'" "HO2'" sing N N 119 
G   "C1'" N9     sing N N 120 
G   "C1'" "H1'"  sing N N 121 
G   N9    C8     sing Y N 122 
G   N9    C4     sing Y N 123 
G   C8    N7     doub Y N 124 
G   C8    H8     sing N N 125 
G   N7    C5     sing Y N 126 
G   C5    C6     sing N N 127 
G   C5    C4     doub Y N 128 
G   C6    O6     doub N N 129 
G   C6    N1     sing N N 130 
G   N1    C2     sing N N 131 
G   N1    H1     sing N N 132 
G   C2    N2     sing N N 133 
G   C2    N3     doub N N 134 
G   N2    H21    sing N N 135 
G   N2    H22    sing N N 136 
G   N3    C4     sing N N 137 
HOH O     H1     sing N N 138 
HOH O     H2     sing N N 139 
NCO CO    N1     sing N N 140 
NCO CO    N2     sing N N 141 
NCO CO    N3     sing N N 142 
NCO CO    N4     sing N N 143 
NCO CO    N5     sing N N 144 
NCO CO    N6     sing N N 145 
NCO N1    HN11   sing N N 146 
NCO N1    HN12   sing N N 147 
NCO N1    HN13   sing N N 148 
NCO N2    HN21   sing N N 149 
NCO N2    HN22   sing N N 150 
NCO N2    HN23   sing N N 151 
NCO N3    HN31   sing N N 152 
NCO N3    HN32   sing N N 153 
NCO N3    HN33   sing N N 154 
NCO N4    HN41   sing N N 155 
NCO N4    HN42   sing N N 156 
NCO N4    HN43   sing N N 157 
NCO N5    HN51   sing N N 158 
NCO N5    HN52   sing N N 159 
NCO N5    HN53   sing N N 160 
NCO N6    HN61   sing N N 161 
NCO N6    HN62   sing N N 162 
NCO N6    HN63   sing N N 163 
U   OP3   P      sing N N 164 
U   OP3   HOP3   sing N N 165 
U   P     OP1    doub N N 166 
U   P     OP2    sing N N 167 
U   P     "O5'"  sing N N 168 
U   OP2   HOP2   sing N N 169 
U   "O5'" "C5'"  sing N N 170 
U   "C5'" "C4'"  sing N N 171 
U   "C5'" "H5'"  sing N N 172 
U   "C5'" "H5''" sing N N 173 
U   "C4'" "O4'"  sing N N 174 
U   "C4'" "C3'"  sing N N 175 
U   "C4'" "H4'"  sing N N 176 
U   "O4'" "C1'"  sing N N 177 
U   "C3'" "O3'"  sing N N 178 
U   "C3'" "C2'"  sing N N 179 
U   "C3'" "H3'"  sing N N 180 
U   "O3'" "HO3'" sing N N 181 
U   "C2'" "O2'"  sing N N 182 
U   "C2'" "C1'"  sing N N 183 
U   "C2'" "H2'"  sing N N 184 
U   "O2'" "HO2'" sing N N 185 
U   "C1'" N1     sing N N 186 
U   "C1'" "H1'"  sing N N 187 
U   N1    C2     sing N N 188 
U   N1    C6     sing N N 189 
U   C2    O2     doub N N 190 
U   C2    N3     sing N N 191 
U   N3    C4     sing N N 192 
U   N3    H3     sing N N 193 
U   C4    O4     doub N N 194 
U   C4    C5     sing N N 195 
U   C5    C6     doub N N 196 
U   C5    H5     sing N N 197 
U   C6    H6     sing N N 198 
# 
loop_
_ndb_struct_conf_na.entry_id 
_ndb_struct_conf_na.feature 
3GOT 'double helix'         
3GOT 'a-form double helix'  
3GOT 'mismatched base pair' 
3GOT 'internal loop'        
3GOT 'triple helix'         
3GOT 'three-way junction'   
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A G 2  1_555 A C 66 1_555 0.054  -0.114 -0.003 -3.091  -14.605 2.334    1  A_G16:C80_A A 16 ? A 80 ? 19 1 
1 A A 3  1_555 A U 65 1_555 0.012  -0.244 0.218  0.789   -21.889 5.324    2  A_A17:U79_A A 17 ? A 79 ? 20 1 
1 A C 4  1_555 A G 64 1_555 -0.391 -0.203 0.316  -0.409  -16.933 0.282    3  A_C18:G78_A A 18 ? A 78 ? 19 1 
1 A A 5  1_555 A U 63 1_555 -0.089 0.040  0.014  -6.269  -8.330  5.658    4  A_A19:U77_A A 19 ? A 77 ? 20 1 
1 A U 6  1_555 A A 62 1_555 0.269  -0.141 0.357  -11.156 -17.610 4.729    5  A_U20:A76_A A 20 ? A 76 ? 20 1 
1 A A 7  1_555 A U 61 1_555 0.183  -0.147 0.022  -1.294  -12.517 1.397    6  A_A21:U75_A A 21 ? A 75 ? 20 1 
1 A U 37 1_555 A U 33 1_555 -3.760 -0.703 0.623  -28.874 37.458  -76.162  7  A_U51:U47_A A 51 ? A 47 ? ?  ? 
1 A A 38 1_555 A U 8  1_555 0.037  -0.098 -0.246 -15.281 2.838   1.540    8  A_A52:U22_A A 52 ? A 22 ? 20 1 
1 A C 39 1_555 A G 32 1_555 0.239  -0.003 -0.221 20.902  -2.584  -0.963   9  A_C53:G46_A A 53 ? A 46 ? 19 1 
1 A U 11 1_555 A A 31 1_555 -0.175 -0.067 0.244  2.071   -12.214 2.570    10 A_U25:A45_A A 25 ? A 45 ? 20 1 
1 A G 13 1_555 A C 29 1_555 -0.242 -0.072 0.063  -6.027  -7.716  3.576    11 A_G27:C43_A A 27 ? A 43 ? 19 1 
1 A C 14 1_555 A G 28 1_555 0.051  -0.138 -0.024 8.725   -11.076 1.151    12 A_C28:G42_A A 28 ? A 42 ? 19 1 
1 A G 15 1_555 A C 27 1_555 -0.413 -0.153 0.128  3.430   -10.165 -1.984   13 A_G29:C41_A A 29 ? A 41 ? 19 1 
1 A U 16 1_555 A A 26 1_555 0.040  -0.116 -0.131 5.280   -4.989  3.857    14 A_U30:A40_A A 30 ? A 40 ? 20 1 
1 A G 17 1_555 A C 25 1_555 -0.310 -0.258 0.078  5.904   -6.873  0.867    15 A_G31:C39_A A 31 ? A 39 ? 19 1 
1 A C 40 1_555 A G 58 1_555 0.490  -0.327 0.380  -5.191  -15.787 0.492    16 A_C54:G72_A A 54 ? A 72 ? 19 1 
1 A G 41 1_555 A C 57 1_555 -0.213 -0.169 0.130  -5.615  -7.828  -3.317   17 A_G55:C71_A A 55 ? A 71 ? 19 1 
1 A G 42 1_555 A C 56 1_555 -0.009 -0.166 0.047  -1.242  -11.680 -4.570   18 A_G56:C70_A A 56 ? A 70 ? 19 1 
1 A G 43 1_555 A U 55 1_555 -2.177 -0.789 0.117  -3.193  -15.781 -6.879   19 A_G57:U69_A A 57 ? A 69 ? 28 1 
1 A C 44 1_555 A G 54 1_555 0.190  -0.244 0.106  3.451   -15.113 1.003    20 A_C58:G68_A A 58 ? A 68 ? 19 1 
1 A A 45 1_555 A U 53 1_555 -0.029 -0.113 -0.054 -4.322  -9.354  1.131    21 A_A59:U67_A A 59 ? A 67 ? 20 1 
1 A C 46 1_555 A G 24 1_555 0.070  -0.127 0.425  -15.608 -13.968 -0.004   22 A_C60:G38_A A 60 ? A 38 ? 19 1 
1 A C 47 1_555 A G 23 1_555 0.055  -0.244 0.731  -5.371  -8.316  -3.688   23 A_C61:G37_A A 61 ? A 37 ? 19 1 
1 A A 50 1_555 A A 21 1_555 4.341  1.148  0.536  5.329   7.373   -106.756 24 A_A64:A35_A A 64 ? A 35 ? 5  4 
1 A G 48 1_555 A U 49 1_555 7.888  1.885  0.708  1.972   8.045   15.062   25 A_G62:U63_A A 62 ? A 63 ? ?  ? 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A G 2  1_555 A C 66 1_555 A A 3  1_555 A U 65 1_555 -0.083 -1.134 3.063 1.004   3.062    35.039  -2.296 0.275  2.953  5.072   
-1.664  35.183  1  AA_G16A17:U79C80_AA A 16 ? A 80 ? A 17 ? A 79 ? 
1 A A 3  1_555 A U 65 1_555 A C 4  1_555 A G 64 1_555 1.079  -1.751 3.136 0.980   10.813   25.991  -5.788 -2.021 2.277  22.815  
-2.068  28.131  2  AA_A17C18:G78U79_AA A 17 ? A 79 ? A 18 ? A 78 ? 
1 A C 4  1_555 A G 64 1_555 A A 5  1_555 A U 63 1_555 -0.373 -1.472 3.142 -0.847  13.833   33.478  -4.086 0.496  2.378  22.836  
1.399   36.158  3  AA_C18A19:U77G78_AA A 18 ? A 78 ? A 19 ? A 77 ? 
1 A A 5  1_555 A U 63 1_555 A U 6  1_555 A A 62 1_555 -0.038 -1.321 3.376 -1.749  11.819   32.035  -4.058 -0.203 2.731  20.545  
3.040   34.136  4  AA_A19U20:A76U77_AA A 19 ? A 77 ? A 20 ? A 76 ? 
1 A U 6  1_555 A A 62 1_555 A A 7  1_555 A U 61 1_555 0.406  -1.668 2.938 4.608   16.462   29.441  -4.923 -0.117 1.820  29.471  
-8.249  33.949  5  AA_U20A21:U75A76_AA A 20 ? A 76 ? A 21 ? A 75 ? 
1 A A 7  1_555 A U 61 1_555 A U 37 1_555 A U 33 1_555 -2.061 6.032  1.948 16.213  4.874    156.063 3.073  1.082  1.940  2.490   
-8.284  156.327 6  AA_A21U51:U47U75_AA A 21 ? A 75 ? A 51 ? A 47 ? 
1 A U 37 1_555 A U 33 1_555 A A 38 1_555 A U 8  1_555 0.049  -1.100 3.378 -2.626  25.352   4.840   -7.827 -0.665 -0.444 79.003  
8.182   25.935  7  AA_U51A52:U22U47_AA A 51 ? A 47 ? A 52 ? A 22 ? 
1 A A 38 1_555 A U 8  1_555 A C 39 1_555 A G 32 1_555 2.040  0.160  2.506 1.578   8.420    44.736  -0.372 -2.528 2.561  10.943  
-2.051  45.508  8  AA_A52C53:G46U22_AA A 52 ? A 22 ? A 53 ? A 46 ? 
1 A C 39 1_555 A G 32 1_555 A U 11 1_555 A A 31 1_555 -2.215 -0.569 3.448 -15.659 5.783    53.356  -0.991 1.335  3.834  6.269   
16.975  55.723  9  AA_C53U25:A45G46_AA A 53 ? A 46 ? A 25 ? A 45 ? 
1 A G 13 1_555 A C 29 1_555 A C 14 1_555 A G 28 1_555 0.778  -2.378 2.930 3.088   3.496    25.700  -6.083 -0.997 2.662  7.777   
-6.869  26.113  10 AA_G27C28:G42C43_AA A 27 ? A 43 ? A 28 ? A 42 ? 
1 A C 14 1_555 A G 28 1_555 A G 15 1_555 A C 27 1_555 -0.682 -1.948 3.278 -2.576  8.388    28.469  -5.423 0.828  2.658  16.566  
5.087   29.763  11 AA_C28G29:C41G42_AA A 28 ? A 42 ? A 29 ? A 41 ? 
1 A G 15 1_555 A C 27 1_555 A U 16 1_555 A A 26 1_555 0.143  -1.273 3.222 2.208   10.399   32.739  -3.665 0.078  2.707  17.871  
-3.795  34.377  12 AA_G29U30:A40C41_AA A 29 ? A 41 ? A 30 ? A 40 ? 
1 A U 16 1_555 A A 26 1_555 A G 17 1_555 A C 25 1_555 0.678  -1.812 3.282 -1.321  4.597    30.908  -4.197 -1.498 2.957  8.561   
2.460   31.267  13 AA_U30G31:C39A40_AA A 30 ? A 40 ? A 31 ? A 39 ? 
1 A C 40 1_555 A G 58 1_555 A G 41 1_555 A C 57 1_555 -0.873 -1.769 3.039 1.444   8.044    32.287  -4.243 1.731  2.498  14.183  
-2.546  33.279  14 AA_C54G55:C71G72_AA A 54 ? A 72 ? A 55 ? A 71 ? 
1 A G 41 1_555 A C 57 1_555 A G 42 1_555 A C 56 1_555 -0.289 -0.739 3.240 0.598   6.614    31.651  -2.460 0.622  3.022  11.961  
-1.082  32.323  15 AA_G55G56:C70C71_AA A 55 ? A 71 ? A 56 ? A 70 ? 
1 A G 42 1_555 A C 56 1_555 A G 43 1_555 A U 55 1_555 0.053  -1.479 3.134 -3.225  7.919    26.151  -4.850 -0.820 2.560  16.934  
6.898   27.490  16 AA_G56G57:U69C70_AA A 56 ? A 70 ? A 57 ? A 69 ? 
1 A G 43 1_555 A U 55 1_555 A C 44 1_555 A G 54 1_555 0.553  -1.186 3.027 -0.696  2.495    44.460  -1.775 -0.788 2.951  3.294   
0.919   44.532  17 AA_G57C58:G68U69_AA A 57 ? A 69 ? A 58 ? A 68 ? 
1 A C 44 1_555 A G 54 1_555 A A 45 1_555 A U 53 1_555 0.389  -1.667 3.461 1.890   6.495    31.509  -4.177 -0.360 3.082  11.791  
-3.431  32.209  18 AA_C58A59:U67G68_AA A 58 ? A 68 ? A 59 ? A 67 ? 
1 A A 45 1_555 A U 53 1_555 A C 46 1_555 A G 24 1_555 2.034  -0.417 3.272 3.990   7.951    55.420  -0.904 -1.933 3.315  8.488   
-4.260  56.073  19 AA_A59C60:G38U67_AA A 59 ? A 67 ? A 60 ? A 38 ? 
1 A C 46 1_555 A G 24 1_555 A C 47 1_555 A G 23 1_555 -0.621 -0.544 3.175 -3.587  7.529    27.821  -2.681 0.480  2.983  15.231  
7.256   29.021  20 AA_C60C61:G37G38_AA A 60 ? A 38 ? A 61 ? A 37 ? 
1 A C 47 1_555 A G 23 1_555 A A 50 1_555 A A 21 1_555 -3.704 -0.386 4.154 -68.313 159.776  155.360 -0.612 1.673  4.293  79.954  
34.185  178.671 21 AA_C61A64:A35G37_AA A 61 ? A 37 ? A 64 ? A 35 ? 
1 A A 50 1_555 A A 21 1_555 A G 48 1_555 A U 49 1_555 -2.781 -4.540 1.403 21.170  -172.026 27.544  -0.019 1.670  4.381  -88.537 
-10.896 173.516 22 AA_A64G62:U63A35_AA A 64 ? A 35 ? A 62 ? A 63 ? 
# 
_atom_sites.entry_id                    3GOT 
_atom_sites.fract_transf_matrix[1][1]   0.007550 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.000013 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.028503 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.023872 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C  
CO 
F  
N  
O  
P  
# 
loop_