data_3GP6 # _entry.id 3GP6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3GP6 pdb_00003gp6 10.2210/pdb3gp6/pdb RCSB RCSB052141 ? ? WWPDB D_1000052141 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1THQ 'Crystal Structure of PagP in LDAO' unspecified PDB 1MM4 'NMR structure' unspecified PDB 1MM5 'NMR structure' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3GP6 _pdbx_database_status.recvd_initial_deposition_date 2009-03-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cuesta-Seijo, J.A.' 1 'Prive, G.G.' 2 # _citation.id primary _citation.title 'PagP crystallized from SDS/cosolvent reveals the route for phospholipid access to the hydrocarbon ruler.' _citation.journal_abbrev Structure _citation.journal_volume 18 _citation.page_first 1210 _citation.page_last 1219 _citation.year 2010 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20826347 _citation.pdbx_database_id_DOI 10.1016/j.str.2010.06.014 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cuesta-Seijo, J.A.' 1 ? primary 'Neale, C.' 2 ? primary 'Khan, M.A.' 3 ? primary 'Moktar, J.' 4 ? primary 'Tran, C.D.' 5 ? primary 'Bishop, R.E.' 6 ? primary 'Pomes, R.' 7 ? primary 'Prive, G.G.' 8 ? # _cell.entry_id 3GP6 _cell.length_a 113.228 _cell.length_b 113.228 _cell.length_c 55.064 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3GP6 _symmetry.space_group_name_H-M 'P 62 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein pagP' 19240.438 1 ? ? ? ? 2 non-polymer syn 'DODECYL SULFATE' 266.397 6 ? ? ? ? 3 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 9 ? ? ? ? 4 non-polymer syn '(4R)-2-METHYLPENTANE-2,4-DIOL' 118.174 1 ? ? ? ? 5 non-polymer syn 'SULFATE ION' 96.063 6 ? ? ? ? 6 non-polymer syn 'LITHIUM ION' 6.941 2 ? ? ? ? 7 water nat water 18.015 56 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Protein crcA' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MNADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWN KWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRF QFL ; _entity_poly.pdbx_seq_one_letter_code_can ;MNADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWN KWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRF QFL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASN n 1 3 ALA n 1 4 ASP n 1 5 GLU n 1 6 TRP n 1 7 MET n 1 8 THR n 1 9 THR n 1 10 PHE n 1 11 ARG n 1 12 GLU n 1 13 ASN n 1 14 ILE n 1 15 ALA n 1 16 GLN n 1 17 THR n 1 18 TRP n 1 19 GLN n 1 20 GLN n 1 21 PRO n 1 22 GLU n 1 23 HIS n 1 24 TYR n 1 25 ASP n 1 26 LEU n 1 27 TYR n 1 28 ILE n 1 29 PRO n 1 30 ALA n 1 31 ILE n 1 32 THR n 1 33 TRP n 1 34 HIS n 1 35 ALA n 1 36 ARG n 1 37 PHE n 1 38 ALA n 1 39 TYR n 1 40 ASP n 1 41 LYS n 1 42 GLU n 1 43 LYS n 1 44 THR n 1 45 ASP n 1 46 ARG n 1 47 TYR n 1 48 ASN n 1 49 GLU n 1 50 ARG n 1 51 PRO n 1 52 TRP n 1 53 GLY n 1 54 GLY n 1 55 GLY n 1 56 PHE n 1 57 GLY n 1 58 LEU n 1 59 SER n 1 60 ARG n 1 61 TRP n 1 62 ASP n 1 63 GLU n 1 64 LYS n 1 65 GLY n 1 66 ASN n 1 67 TRP n 1 68 HIS n 1 69 GLY n 1 70 LEU n 1 71 TYR n 1 72 ALA n 1 73 MET n 1 74 ALA n 1 75 PHE n 1 76 LYS n 1 77 ASP n 1 78 SER n 1 79 TRP n 1 80 ASN n 1 81 LYS n 1 82 TRP n 1 83 GLU n 1 84 PRO n 1 85 ILE n 1 86 ALA n 1 87 GLY n 1 88 TYR n 1 89 GLY n 1 90 TRP n 1 91 GLU n 1 92 SER n 1 93 THR n 1 94 TRP n 1 95 ARG n 1 96 PRO n 1 97 LEU n 1 98 ALA n 1 99 ASP n 1 100 GLU n 1 101 ASN n 1 102 PHE n 1 103 HIS n 1 104 LEU n 1 105 GLY n 1 106 LEU n 1 107 GLY n 1 108 PHE n 1 109 THR n 1 110 ALA n 1 111 GLY n 1 112 VAL n 1 113 THR n 1 114 ALA n 1 115 ARG n 1 116 ASP n 1 117 ASN n 1 118 TRP n 1 119 ASN n 1 120 TYR n 1 121 ILE n 1 122 PRO n 1 123 LEU n 1 124 PRO n 1 125 VAL n 1 126 LEU n 1 127 LEU n 1 128 PRO n 1 129 LEU n 1 130 ALA n 1 131 SER n 1 132 VAL n 1 133 GLY n 1 134 TYR n 1 135 GLY n 1 136 PRO n 1 137 VAL n 1 138 THR n 1 139 PHE n 1 140 GLN n 1 141 MET n 1 142 THR n 1 143 TYR n 1 144 ILE n 1 145 PRO n 1 146 GLY n 1 147 THR n 1 148 TYR n 1 149 ASN n 1 150 ASN n 1 151 GLY n 1 152 ASN n 1 153 VAL n 1 154 TYR n 1 155 PHE n 1 156 ALA n 1 157 TRP n 1 158 MET n 1 159 ARG n 1 160 PHE n 1 161 GLN n 1 162 PHE n 1 163 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'b0622, crcA, JW0617, ybeG' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET21(a)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CRCA_ECOLI _struct_ref.pdbx_db_accession P37001 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NADEWMTTFRENIAQTWQQPEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDSWNK WEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGPVTFQMTYIPGTYNNGNVYFAWMRFQ F ; _struct_ref.pdbx_align_begin 26 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3GP6 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 162 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P37001 _struct_ref_seq.db_align_beg 26 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 186 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 161 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3GP6 MET A 1 ? UNP P37001 ? ? 'initiating methionine' 0 1 1 3GP6 LEU A 163 ? UNP P37001 ? ? 'expression tag' 162 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LI non-polymer . 'LITHIUM ION' ? 'Li 1' 6.941 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 MRD non-polymer . '(4R)-2-METHYLPENTANE-2,4-DIOL' ? 'C6 H14 O2' 118.174 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SDS non-polymer . 'DODECYL SULFATE' ? 'C12 H26 O4 S' 266.397 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3GP6 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.65 _exptl_crystal.density_percent_sol 53.55 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.6 _exptl_crystal_grow.pdbx_details ;1M MPD, 0.1M citrate pH 5.6, 1.7M lithium sulphate, 0.3M ammonium sulphate, SDS, Phase separation, VAPOR DIFFUSION, HANGING DROP, temperature 291K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2007-01-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.98 # _reflns.entry_id 3GP6 _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F -3.0 _reflns.d_resolution_low 20.0 _reflns.d_resolution_high 1.40 _reflns.number_obs 40433 _reflns.number_all 40433 _reflns.percent_possible_obs 97.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.068 _reflns.B_iso_Wilson_estimate 21.8 _reflns.pdbx_redundancy 8.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_netI_over_sigmaI ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.40 _reflns_shell.d_res_low 1.42 _reflns_shell.percent_possible_all 80.4 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.531 _reflns_shell.meanI_over_sigI_obs 1.36 _reflns_shell.pdbx_redundancy 4.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1633 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3GP6 _refine.ls_number_reflns_obs 39132 _refine.ls_number_reflns_all 39132 _refine.pdbx_ls_sigma_I -3.0 _refine.pdbx_ls_sigma_F -3.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 1.40 _refine.ls_percent_reflns_obs 97.74 _refine.ls_R_factor_obs 0.17259 _refine.ls_R_factor_all 0.17259 _refine.ls_R_factor_R_work 0.17147 _refine.ls_R_factor_R_free 0.20817 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 3.1 _refine.ls_number_reflns_R_free 1260 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.970 _refine.correlation_coeff_Fo_to_Fc_free 0.959 _refine.B_iso_mean 28.065 _refine.aniso_B[1][1] 3.20 _refine.aniso_B[2][2] 3.20 _refine.aniso_B[3][3] -4.80 _refine.aniso_B[1][2] 1.60 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. The author states that the crystallization conditions included large amounts of lithium, but it cannot be confirmed that the ion is lithium based on electron density. ; _refine.pdbx_starting_model 'PDB entry 1THQ' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model anisotropic _refine.pdbx_stereochemistry_target_values 'Refmac 5' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.062 _refine.pdbx_overall_ESU_R_Free 0.060 _refine.overall_SU_ML 0.050 _refine.overall_SU_B 3.009 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3GP6 _refine_analyze.Luzzati_coordinate_error_obs 0.202 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1258 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 209 _refine_hist.number_atoms_solvent 56 _refine_hist.number_atoms_total 1523 _refine_hist.d_res_high 1.40 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.021 0.021 ? 1567 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 1452 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.119 2.017 ? 2146 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.960 3.000 ? 3338 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.084 5.000 ? 173 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 32.108 22.899 ? 69 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.991 15.000 ? 191 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.014 15.000 ? 8 'X-RAY DIFFRACTION' ? r_chiral_restr 0.137 0.200 ? 187 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.012 0.020 ? 1592 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 332 'X-RAY DIFFRACTION' ? r_nbd_refined 0.236 0.200 ? 246 'X-RAY DIFFRACTION' ? r_nbd_other 0.193 0.200 ? 1358 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.199 0.200 ? 682 'X-RAY DIFFRACTION' ? r_nbtor_other 0.092 0.200 ? 911 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.244 0.200 ? 60 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other 0.042 0.200 ? 1 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.217 0.200 ? 4 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.183 0.200 ? 10 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.242 0.200 ? 88 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.222 0.200 ? 6 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined 0.105 0.200 ? 1 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.793 1.500 ? 830 'X-RAY DIFFRACTION' ? r_mcbond_other 1.726 1.500 ? 329 'X-RAY DIFFRACTION' ? r_mcangle_it 3.806 2.000 ? 1295 'X-RAY DIFFRACTION' ? r_scbond_it 4.125 3.000 ? 882 'X-RAY DIFFRACTION' ? r_scangle_it 5.134 4.500 ? 841 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 2.612 3.000 ? 3632 'X-RAY DIFFRACTION' ? r_sphericity_free 15.265 3.000 ? 58 'X-RAY DIFFRACTION' ? r_sphericity_bonded 9.638 3.000 ? 2977 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.400 _refine_ls_shell.d_res_low 1.436 _refine_ls_shell.number_reflns_R_work 2364 _refine_ls_shell.R_factor_R_work 0.303 _refine_ls_shell.percent_reflns_obs 82.24 _refine_ls_shell.R_factor_R_free 0.290 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 91 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3GP6 _struct.title 'Crystal structure of PagP in SDS/MPD' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3GP6 _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'PALMITOYLTRANSFERASE, BETA-BARREL, OUTER MEMBRANE ENZYME, PagP, SDS, MPD, TRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? O N N 3 ? P N N 3 ? Q N N 4 ? R N N 5 ? S N N 5 ? T N N 5 ? U N N 5 ? V N N 5 ? W N N 5 ? X N N 6 ? Y N N 6 ? Z N N 7 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 2 ? GLN A 20 ? ASN A 1 GLN A 19 1 ? 19 HELX_P HELX_P2 2 ASP A 116 ? ASN A 119 ? ASP A 115 ASN A 118 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A GLU 22 O ? ? ? 1_555 X LI . LI ? ? A GLU 21 A LI 185 1_555 ? ? ? ? ? ? ? 1.926 ? ? metalc2 metalc ? ? A LEU 163 OXT ? ? ? 1_555 X LI . LI ? ? A LEU 162 A LI 185 1_555 ? ? ? ? ? ? ? 1.809 ? ? metalc3 metalc ? ? J MPD . O4 ? ? ? 1_555 X LI . LI ? ? A MPD 171 A LI 185 1_555 ? ? ? ? ? ? ? 2.003 ? ? metalc4 metalc ? ? Y LI . LI ? ? ? 1_555 Z HOH . O ? ? A LI 186 A HOH 201 1_555 ? ? ? ? ? ? ? 2.543 ? ? metalc5 metalc ? ? Y LI . LI ? ? ? 1_555 Z HOH . O ? ? A LI 186 A HOH 215 1_555 ? ? ? ? ? ? ? 2.313 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 9 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 23 ? HIS A 34 ? HIS A 22 HIS A 33 A 2 GLY A 53 ? TRP A 61 ? GLY A 52 TRP A 60 A 3 TRP A 67 ? LYS A 76 ? TRP A 66 LYS A 75 A 4 TRP A 82 ? TRP A 94 ? TRP A 81 TRP A 93 A 5 PHE A 102 ? ALA A 114 ? PHE A 101 ALA A 113 A 6 PRO A 122 ? TYR A 134 ? PRO A 121 TYR A 133 A 7 VAL A 137 ? ILE A 144 ? VAL A 136 ILE A 143 A 8 VAL A 153 ? PHE A 162 ? VAL A 152 PHE A 161 A 9 HIS A 23 ? HIS A 34 ? HIS A 22 HIS A 33 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 27 ? N TYR A 26 O GLY A 55 ? O GLY A 54 A 2 3 N LEU A 58 ? N LEU A 57 O LEU A 70 ? O LEU A 69 A 3 4 N MET A 73 ? N MET A 72 O ILE A 85 ? O ILE A 84 A 4 5 N TYR A 88 ? N TYR A 87 O ALA A 110 ? O ALA A 109 A 5 6 N THR A 113 ? N THR A 112 O LEU A 123 ? O LEU A 122 A 6 7 N VAL A 132 ? N VAL A 131 O PHE A 139 ? O PHE A 138 A 7 8 N ILE A 144 ? N ILE A 143 O VAL A 153 ? O VAL A 152 A 8 9 O PHE A 162 ? O PHE A 161 N TYR A 24 ? N TYR A 23 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SDS 163 ? 5 'BINDING SITE FOR RESIDUE SDS A 163' AC2 Software A SDS 164 ? 7 'BINDING SITE FOR RESIDUE SDS A 164' AC3 Software A SDS 165 ? 4 'BINDING SITE FOR RESIDUE SDS A 165' AC4 Software A SDS 166 ? 9 'BINDING SITE FOR RESIDUE SDS A 166' AC5 Software A SDS 167 ? 4 'BINDING SITE FOR RESIDUE SDS A 167' AC6 Software A SDS 168 ? 4 'BINDING SITE FOR RESIDUE SDS A 168' AC7 Software A MPD 169 ? 6 'BINDING SITE FOR RESIDUE MPD A 169' AC8 Software A MPD 170 ? 5 'BINDING SITE FOR RESIDUE MPD A 170' AC9 Software A MPD 171 ? 10 'BINDING SITE FOR RESIDUE MPD A 171' BC1 Software A MPD 172 ? 4 'BINDING SITE FOR RESIDUE MPD A 172' BC2 Software A MPD 173 ? 5 'BINDING SITE FOR RESIDUE MPD A 173' BC3 Software A MPD 174 ? 6 'BINDING SITE FOR RESIDUE MPD A 174' BC4 Software A MPD 175 ? 4 'BINDING SITE FOR RESIDUE MPD A 175' BC5 Software A MPD 176 ? 3 'BINDING SITE FOR RESIDUE MPD A 176' BC6 Software A MPD 177 ? 4 'BINDING SITE FOR RESIDUE MPD A 177' BC7 Software A MRD 178 ? 5 'BINDING SITE FOR RESIDUE MRD A 178' BC8 Software A SO4 179 ? 5 'BINDING SITE FOR RESIDUE SO4 A 179' BC9 Software A SO4 180 ? 5 'BINDING SITE FOR RESIDUE SO4 A 180' CC1 Software A SO4 181 ? 1 'BINDING SITE FOR RESIDUE SO4 A 181' CC2 Software A SO4 182 ? 3 'BINDING SITE FOR RESIDUE SO4 A 182' CC3 Software A SO4 183 ? 5 'BINDING SITE FOR RESIDUE SO4 A 183' CC4 Software A SO4 184 ? 3 'BINDING SITE FOR RESIDUE SO4 A 184' CC5 Software A LI 185 ? 7 'BINDING SITE FOR RESIDUE LI A 185' CC6 Software A LI 186 ? 5 'BINDING SITE FOR RESIDUE LI A 186' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ARG A 11 ? ARG A 10 . ? 11_556 ? 2 AC1 5 TYR A 71 ? TYR A 70 . ? 1_555 ? 3 AC1 5 ILE A 85 ? ILE A 84 . ? 1_555 ? 4 AC1 5 ARG A 115 ? ARG A 114 . ? 1_555 ? 5 AC1 5 TRP A 157 ? TRP A 156 . ? 1_555 ? 6 AC2 7 ALA A 15 ? ALA A 14 . ? 1_555 ? 7 AC2 7 TRP A 18 ? TRP A 17 . ? 1_555 ? 8 AC2 7 GLN A 19 ? GLN A 18 . ? 1_555 ? 9 AC2 7 PHE A 56 ? PHE A 55 . ? 1_555 ? 10 AC2 7 TYR A 71 ? TYR A 70 . ? 1_555 ? 11 AC2 7 MPD M . ? MPD A 174 . ? 11_556 ? 12 AC2 7 MPD P . ? MPD A 177 . ? 1_555 ? 13 AC3 4 TRP A 94 ? TRP A 93 . ? 1_555 ? 14 AC3 4 PRO A 96 ? PRO A 95 . ? 1_555 ? 15 AC3 4 LEU A 106 ? LEU A 105 . ? 1_555 ? 16 AC3 4 SER A 131 ? SER A 130 . ? 1_555 ? 17 AC4 9 ILE A 31 ? ILE A 30 . ? 7_556 ? 18 AC4 9 PHE A 37 ? PHE A 36 . ? 7_556 ? 19 AC4 9 TYR A 47 ? TYR A 46 . ? 7_556 ? 20 AC4 9 PHE A 102 ? PHE A 101 . ? 1_555 ? 21 AC4 9 VAL A 132 ? VAL A 131 . ? 1_555 ? 22 AC4 9 GLY A 133 ? GLY A 132 . ? 1_555 ? 23 AC4 9 TYR A 134 ? TYR A 133 . ? 1_555 ? 24 AC4 9 PRO A 136 ? PRO A 135 . ? 1_555 ? 25 AC4 9 PHE A 139 ? PHE A 138 . ? 7_556 ? 26 AC5 4 TRP A 52 ? TRP A 51 . ? 1_555 ? 27 AC5 4 LYS A 76 ? LYS A 75 . ? 1_555 ? 28 AC5 4 TRP A 82 ? TRP A 81 . ? 1_555 ? 29 AC5 4 SO4 S . ? SO4 A 180 . ? 1_555 ? 30 AC6 4 SER A 92 ? SER A 91 . ? 1_555 ? 31 AC6 4 LEU A 106 ? LEU A 105 . ? 1_555 ? 32 AC6 4 GLY A 107 ? GLY A 106 . ? 1_555 ? 33 AC6 4 SO4 R . ? SO4 A 179 . ? 1_555 ? 34 AC7 6 LEU A 106 ? LEU A 105 . ? 7_556 ? 35 AC7 6 PRO A 128 ? PRO A 127 . ? 7_556 ? 36 AC7 6 LEU A 129 ? LEU A 128 . ? 7_556 ? 37 AC7 6 SO4 V . ? SO4 A 183 . ? 7_556 ? 38 AC7 6 HOH Z . ? HOH A 205 . ? 1_555 ? 39 AC7 6 HOH Z . ? HOH A 231 . ? 1_555 ? 40 AC8 5 ALA A 110 ? ALA A 109 . ? 1_555 ? 41 AC8 5 PRO A 122 ? PRO A 121 . ? 11_556 ? 42 AC8 5 LEU A 123 ? LEU A 122 . ? 11_556 ? 43 AC8 5 PRO A 124 ? PRO A 123 . ? 11_556 ? 44 AC8 5 MPD M . ? MPD A 174 . ? 11_556 ? 45 AC9 10 PRO A 21 ? PRO A 20 . ? 1_555 ? 46 AC9 10 PRO A 21 ? PRO A 20 . ? 11_557 ? 47 AC9 10 GLU A 22 ? GLU A 21 . ? 11_557 ? 48 AC9 10 GLU A 22 ? GLU A 21 . ? 1_555 ? 49 AC9 10 HIS A 23 ? HIS A 22 . ? 1_555 ? 50 AC9 10 LEU A 163 ? LEU A 162 . ? 11_557 ? 51 AC9 10 LEU A 163 ? LEU A 162 . ? 1_555 ? 52 AC9 10 SO4 W . ? SO4 A 184 . ? 1_555 ? 53 AC9 10 LI X . ? LI A 185 . ? 1_555 ? 54 AC9 10 LI X . ? LI A 185 . ? 11_557 ? 55 BC1 4 TRP A 6 ? TRP A 5 . ? 11_556 ? 56 BC1 4 PHE A 10 ? PHE A 9 . ? 11_556 ? 57 BC1 4 HOH Z . ? HOH A 232 . ? 11_556 ? 58 BC1 4 HOH Z . ? HOH A 232 . ? 1_555 ? 59 BC2 5 GLY A 54 ? GLY A 53 . ? 1_555 ? 60 BC2 5 ALA A 72 ? ALA A 71 . ? 1_555 ? 61 BC2 5 MET A 73 ? MET A 72 . ? 1_555 ? 62 BC2 5 SO4 S . ? SO4 A 180 . ? 1_555 ? 63 BC2 5 HOH Z . ? HOH A 239 . ? 1_555 ? 64 BC3 6 ARG A 11 ? ARG A 10 . ? 11_556 ? 65 BC3 6 ILE A 14 ? ILE A 13 . ? 11_556 ? 66 BC3 6 TRP A 118 ? TRP A 117 . ? 1_555 ? 67 BC3 6 LEU A 123 ? LEU A 122 . ? 1_555 ? 68 BC3 6 SDS C . ? SDS A 164 . ? 11_556 ? 69 BC3 6 MPD I . ? MPD A 170 . ? 11_556 ? 70 BC4 4 ASP A 4 ? ASP A 3 . ? 5_555 ? 71 BC4 4 ALA A 98 ? ALA A 97 . ? 1_555 ? 72 BC4 4 ASP A 99 ? ASP A 98 . ? 1_555 ? 73 BC4 4 TYR A 143 ? TYR A 142 . ? 7_556 ? 74 BC5 3 ALA A 114 ? ALA A 113 . ? 1_555 ? 75 BC5 3 PRO A 122 ? PRO A 121 . ? 11_556 ? 76 BC5 3 PRO A 122 ? PRO A 121 . ? 1_555 ? 77 BC6 4 ASN A 117 ? ASN A 116 . ? 11_556 ? 78 BC6 4 TRP A 118 ? TRP A 117 . ? 11_556 ? 79 BC6 4 ASN A 119 ? ASN A 118 . ? 11_556 ? 80 BC6 4 SDS C . ? SDS A 164 . ? 1_555 ? 81 BC7 5 PHE A 10 ? PHE A 9 . ? 1_555 ? 82 BC7 5 ASN A 13 ? ASN A 12 . ? 1_555 ? 83 BC7 5 TYR A 88 ? TYR A 87 . ? 1_555 ? 84 BC7 5 TRP A 90 ? TRP A 89 . ? 1_555 ? 85 BC7 5 PHE A 108 ? PHE A 107 . ? 1_555 ? 86 BC8 5 PHE A 108 ? PHE A 107 . ? 1_555 ? 87 BC8 5 LEU A 126 ? LEU A 125 . ? 1_555 ? 88 BC8 5 LEU A 127 ? LEU A 126 . ? 1_555 ? 89 BC8 5 SDS G . ? SDS A 168 . ? 1_555 ? 90 BC8 5 SO4 V . ? SO4 A 183 . ? 1_555 ? 91 BC9 5 GLY A 54 ? GLY A 53 . ? 1_555 ? 92 BC9 5 ALA A 74 ? ALA A 73 . ? 1_555 ? 93 BC9 5 TRP A 82 ? TRP A 81 . ? 1_555 ? 94 BC9 5 SDS F . ? SDS A 167 . ? 1_555 ? 95 BC9 5 MPD L . ? MPD A 173 . ? 1_555 ? 96 CC1 1 HOH Z . ? HOH A 233 . ? 1_555 ? 97 CC2 3 TRP A 18 ? TRP A 17 . ? 1_555 ? 98 CC2 3 LEU A 163 ? LEU A 162 . ? 11_557 ? 99 CC2 3 SO4 W . ? SO4 A 184 . ? 1_555 ? 100 CC3 5 ALA A 3 ? ALA A 2 . ? 11_556 ? 101 CC3 5 PRO A 128 ? PRO A 127 . ? 1_555 ? 102 CC3 5 TYR A 143 ? TYR A 142 . ? 1_555 ? 103 CC3 5 MPD H . ? MPD A 169 . ? 7_556 ? 104 CC3 5 SO4 R . ? SO4 A 179 . ? 1_555 ? 105 CC4 3 TYR A 24 ? TYR A 23 . ? 1_555 ? 106 CC4 3 MPD J . ? MPD A 171 . ? 1_555 ? 107 CC4 3 SO4 U . ? SO4 A 182 . ? 1_555 ? 108 CC5 7 PRO A 21 ? PRO A 20 . ? 11_557 ? 109 CC5 7 GLU A 22 ? GLU A 21 . ? 11_557 ? 110 CC5 7 GLU A 22 ? GLU A 21 . ? 1_555 ? 111 CC5 7 HIS A 23 ? HIS A 22 . ? 1_555 ? 112 CC5 7 LEU A 163 ? LEU A 162 . ? 1_555 ? 113 CC5 7 MPD J . ? MPD A 171 . ? 1_555 ? 114 CC5 7 MPD J . ? MPD A 171 . ? 11_557 ? 115 CC6 5 GLU A 22 ? GLU A 21 . ? 1_555 ? 116 CC6 5 HIS A 23 ? HIS A 22 . ? 11_557 ? 117 CC6 5 HOH Z . ? HOH A 200 . ? 1_555 ? 118 CC6 5 HOH Z . ? HOH A 201 . ? 1_555 ? 119 CC6 5 HOH Z . ? HOH A 215 . ? 1_555 ? # _database_PDB_matrix.entry_id 3GP6 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3GP6 _atom_sites.fract_transf_matrix[1][1] 0.008832 _atom_sites.fract_transf_matrix[1][2] 0.005099 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010198 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018161 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C LI N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 0 0 MET MET A . n A 1 2 ASN 2 1 1 ASN ASN A . n A 1 3 ALA 3 2 2 ALA ALA A . n A 1 4 ASP 4 3 3 ASP ASP A . n A 1 5 GLU 5 4 4 GLU GLU A . n A 1 6 TRP 6 5 5 TRP TRP A . n A 1 7 MET 7 6 6 MET MET A . n A 1 8 THR 8 7 7 THR THR A . n A 1 9 THR 9 8 8 THR THR A . n A 1 10 PHE 10 9 9 PHE PHE A . n A 1 11 ARG 11 10 10 ARG ARG A . n A 1 12 GLU 12 11 11 GLU GLU A . n A 1 13 ASN 13 12 12 ASN ASN A . n A 1 14 ILE 14 13 13 ILE ILE A . n A 1 15 ALA 15 14 14 ALA ALA A . n A 1 16 GLN 16 15 15 GLN GLN A . n A 1 17 THR 17 16 16 THR THR A . n A 1 18 TRP 18 17 17 TRP TRP A . n A 1 19 GLN 19 18 18 GLN GLN A . n A 1 20 GLN 20 19 19 GLN GLN A . n A 1 21 PRO 21 20 20 PRO PRO A . n A 1 22 GLU 22 21 21 GLU GLU A . n A 1 23 HIS 23 22 22 HIS HIS A . n A 1 24 TYR 24 23 23 TYR TYR A . n A 1 25 ASP 25 24 24 ASP ASP A . n A 1 26 LEU 26 25 25 LEU LEU A . n A 1 27 TYR 27 26 26 TYR TYR A . n A 1 28 ILE 28 27 27 ILE ILE A . n A 1 29 PRO 29 28 28 PRO PRO A . n A 1 30 ALA 30 29 29 ALA ALA A . n A 1 31 ILE 31 30 30 ILE ILE A . n A 1 32 THR 32 31 31 THR THR A . n A 1 33 TRP 33 32 32 TRP TRP A . n A 1 34 HIS 34 33 33 HIS HIS A . n A 1 35 ALA 35 34 34 ALA ALA A . n A 1 36 ARG 36 35 35 ARG ARG A . n A 1 37 PHE 37 36 36 PHE PHE A . n A 1 38 ALA 38 37 37 ALA ALA A . n A 1 39 TYR 39 38 ? ? ? A . n A 1 40 ASP 40 39 ? ? ? A . n A 1 41 LYS 41 40 ? ? ? A . n A 1 42 GLU 42 41 ? ? ? A . n A 1 43 LYS 43 42 ? ? ? A . n A 1 44 THR 44 43 ? ? ? A . n A 1 45 ASP 45 44 ? ? ? A . n A 1 46 ARG 46 45 ? ? ? A . n A 1 47 TYR 47 46 46 TYR TYR A . n A 1 48 ASN 48 47 47 ASN ASN A . n A 1 49 GLU 49 48 48 GLU GLU A . n A 1 50 ARG 50 49 49 ARG ARG A . n A 1 51 PRO 51 50 50 PRO PRO A . n A 1 52 TRP 52 51 51 TRP TRP A . n A 1 53 GLY 53 52 52 GLY GLY A . n A 1 54 GLY 54 53 53 GLY GLY A . n A 1 55 GLY 55 54 54 GLY GLY A . n A 1 56 PHE 56 55 55 PHE PHE A . n A 1 57 GLY 57 56 56 GLY GLY A . n A 1 58 LEU 58 57 57 LEU LEU A . n A 1 59 SER 59 58 58 SER SER A . n A 1 60 ARG 60 59 59 ARG ARG A . n A 1 61 TRP 61 60 60 TRP TRP A . n A 1 62 ASP 62 61 61 ASP ASP A . n A 1 63 GLU 63 62 62 GLU GLU A . n A 1 64 LYS 64 63 63 LYS LYS A . n A 1 65 GLY 65 64 64 GLY GLY A . n A 1 66 ASN 66 65 65 ASN ASN A . n A 1 67 TRP 67 66 66 TRP TRP A . n A 1 68 HIS 68 67 67 HIS HIS A . n A 1 69 GLY 69 68 68 GLY GLY A . n A 1 70 LEU 70 69 69 LEU LEU A . n A 1 71 TYR 71 70 70 TYR TYR A . n A 1 72 ALA 72 71 71 ALA ALA A . n A 1 73 MET 73 72 72 MET MET A . n A 1 74 ALA 74 73 73 ALA ALA A . n A 1 75 PHE 75 74 74 PHE PHE A . n A 1 76 LYS 76 75 75 LYS LYS A . n A 1 77 ASP 77 76 76 ASP ASP A . n A 1 78 SER 78 77 77 SER SER A . n A 1 79 TRP 79 78 78 TRP TRP A . n A 1 80 ASN 80 79 79 ASN ASN A . n A 1 81 LYS 81 80 80 LYS LYS A . n A 1 82 TRP 82 81 81 TRP TRP A . n A 1 83 GLU 83 82 82 GLU GLU A . n A 1 84 PRO 84 83 83 PRO PRO A . n A 1 85 ILE 85 84 84 ILE ILE A . n A 1 86 ALA 86 85 85 ALA ALA A . n A 1 87 GLY 87 86 86 GLY GLY A . n A 1 88 TYR 88 87 87 TYR TYR A . n A 1 89 GLY 89 88 88 GLY GLY A . n A 1 90 TRP 90 89 89 TRP TRP A . n A 1 91 GLU 91 90 90 GLU GLU A . n A 1 92 SER 92 91 91 SER SER A . n A 1 93 THR 93 92 92 THR THR A . n A 1 94 TRP 94 93 93 TRP TRP A . n A 1 95 ARG 95 94 94 ARG ARG A . n A 1 96 PRO 96 95 95 PRO PRO A . n A 1 97 LEU 97 96 96 LEU LEU A . n A 1 98 ALA 98 97 97 ALA ALA A . n A 1 99 ASP 99 98 98 ASP ASP A . n A 1 100 GLU 100 99 99 GLU GLU A . n A 1 101 ASN 101 100 100 ASN ASN A . n A 1 102 PHE 102 101 101 PHE PHE A . n A 1 103 HIS 103 102 102 HIS HIS A . n A 1 104 LEU 104 103 103 LEU LEU A . n A 1 105 GLY 105 104 104 GLY GLY A . n A 1 106 LEU 106 105 105 LEU LEU A . n A 1 107 GLY 107 106 106 GLY GLY A . n A 1 108 PHE 108 107 107 PHE PHE A . n A 1 109 THR 109 108 108 THR THR A . n A 1 110 ALA 110 109 109 ALA ALA A . n A 1 111 GLY 111 110 110 GLY GLY A . n A 1 112 VAL 112 111 111 VAL VAL A . n A 1 113 THR 113 112 112 THR THR A . n A 1 114 ALA 114 113 113 ALA ALA A . n A 1 115 ARG 115 114 114 ARG ARG A . n A 1 116 ASP 116 115 115 ASP ASP A . n A 1 117 ASN 117 116 116 ASN ASN A . n A 1 118 TRP 118 117 117 TRP TRP A . n A 1 119 ASN 119 118 118 ASN ASN A . n A 1 120 TYR 120 119 119 TYR TYR A . n A 1 121 ILE 121 120 120 ILE ILE A . n A 1 122 PRO 122 121 121 PRO PRO A . n A 1 123 LEU 123 122 122 LEU LEU A . n A 1 124 PRO 124 123 123 PRO PRO A . n A 1 125 VAL 125 124 124 VAL VAL A . n A 1 126 LEU 126 125 125 LEU LEU A . n A 1 127 LEU 127 126 126 LEU LEU A . n A 1 128 PRO 128 127 127 PRO PRO A . n A 1 129 LEU 129 128 128 LEU LEU A . n A 1 130 ALA 130 129 129 ALA ALA A . n A 1 131 SER 131 130 130 SER SER A . n A 1 132 VAL 132 131 131 VAL VAL A . n A 1 133 GLY 133 132 132 GLY GLY A . n A 1 134 TYR 134 133 133 TYR TYR A . n A 1 135 GLY 135 134 134 GLY GLY A . n A 1 136 PRO 136 135 135 PRO PRO A . n A 1 137 VAL 137 136 136 VAL VAL A . n A 1 138 THR 138 137 137 THR THR A . n A 1 139 PHE 139 138 138 PHE PHE A . n A 1 140 GLN 140 139 139 GLN GLN A . n A 1 141 MET 141 140 140 MET MET A . n A 1 142 THR 142 141 141 THR THR A . n A 1 143 TYR 143 142 142 TYR TYR A . n A 1 144 ILE 144 143 143 ILE ILE A . n A 1 145 PRO 145 144 144 PRO PRO A . n A 1 146 GLY 146 145 145 GLY GLY A . n A 1 147 THR 147 146 146 THR THR A . n A 1 148 TYR 148 147 147 TYR TYR A . n A 1 149 ASN 149 148 148 ASN ASN A . n A 1 150 ASN 150 149 149 ASN ASN A . n A 1 151 GLY 151 150 150 GLY GLY A . n A 1 152 ASN 152 151 151 ASN ASN A . n A 1 153 VAL 153 152 152 VAL VAL A . n A 1 154 TYR 154 153 153 TYR TYR A . n A 1 155 PHE 155 154 154 PHE PHE A . n A 1 156 ALA 156 155 155 ALA ALA A . n A 1 157 TRP 157 156 156 TRP TRP A . n A 1 158 MET 158 157 157 MET MET A . n A 1 159 ARG 159 158 158 ARG ARG A . n A 1 160 PHE 160 159 159 PHE PHE A . n A 1 161 GLN 161 160 160 GLN GLN A . n A 1 162 PHE 162 161 161 PHE PHE A . n A 1 163 LEU 163 162 162 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SDS 1 163 1 SDS SDS A . C 2 SDS 1 164 2 SDS SDS A . D 2 SDS 1 165 3 SDS SDS A . E 2 SDS 1 166 4 SDS SDS A . F 2 SDS 1 167 5 SDS SDS A . G 2 SDS 1 168 6 SDS SDS A . H 3 MPD 1 169 1 MPD MPD A . I 3 MPD 1 170 2 MPD MPD A . J 3 MPD 1 171 3 MPD MPD A . K 3 MPD 1 172 4 MPD MPD A . L 3 MPD 1 173 5 MPD MPD A . M 3 MPD 1 174 6 MPD MPD A . N 3 MPD 1 175 7 MPD MPD A . O 3 MPD 1 176 8 MPD MPD A . P 3 MPD 1 177 9 MPD MPD A . Q 4 MRD 1 178 10 MRD MPD A . R 5 SO4 1 179 1 SO4 SO4 A . S 5 SO4 1 180 2 SO4 SO4 A . T 5 SO4 1 181 3 SO4 SO4 A . U 5 SO4 1 182 4 SO4 SO4 A . V 5 SO4 1 183 5 SO4 SO4 A . W 5 SO4 1 184 6 SO4 SO4 A . X 6 LI 1 185 1 LI LI A . Y 6 LI 1 186 2 LI LI A . Z 7 HOH 1 187 1 HOH HOH A . Z 7 HOH 2 188 2 HOH HOH A . Z 7 HOH 3 189 3 HOH HOH A . Z 7 HOH 4 190 4 HOH HOH A . Z 7 HOH 5 191 5 HOH HOH A . Z 7 HOH 6 192 6 HOH HOH A . Z 7 HOH 7 193 7 HOH HOH A . Z 7 HOH 8 194 8 HOH HOH A . Z 7 HOH 9 195 9 HOH HOH A . Z 7 HOH 10 196 10 HOH HOH A . Z 7 HOH 11 197 11 HOH HOH A . Z 7 HOH 12 198 12 HOH HOH A . Z 7 HOH 13 199 13 HOH HOH A . Z 7 HOH 14 200 14 HOH HOH A . Z 7 HOH 15 201 15 HOH HOH A . Z 7 HOH 16 202 16 HOH HOH A . Z 7 HOH 17 203 17 HOH HOH A . Z 7 HOH 18 204 18 HOH HOH A . Z 7 HOH 19 205 19 HOH HOH A . Z 7 HOH 20 206 20 HOH HOH A . Z 7 HOH 21 207 21 HOH HOH A . Z 7 HOH 22 208 22 HOH HOH A . Z 7 HOH 23 209 23 HOH HOH A . Z 7 HOH 24 210 24 HOH HOH A . Z 7 HOH 25 211 25 HOH HOH A . Z 7 HOH 26 212 26 HOH HOH A . Z 7 HOH 27 213 27 HOH HOH A . Z 7 HOH 28 214 28 HOH HOH A . Z 7 HOH 29 215 29 HOH HOH A . Z 7 HOH 30 216 30 HOH HOH A . Z 7 HOH 31 217 31 HOH HOH A . Z 7 HOH 32 218 32 HOH HOH A . Z 7 HOH 33 219 33 HOH HOH A . Z 7 HOH 34 220 34 HOH HOH A . Z 7 HOH 35 221 35 HOH HOH A . Z 7 HOH 36 222 36 HOH HOH A . Z 7 HOH 37 223 37 HOH HOH A . Z 7 HOH 38 224 38 HOH HOH A . Z 7 HOH 39 225 39 HOH HOH A . Z 7 HOH 40 226 40 HOH HOH A . Z 7 HOH 41 227 41 HOH HOH A . Z 7 HOH 42 228 42 HOH HOH A . Z 7 HOH 43 229 43 HOH HOH A . Z 7 HOH 44 230 44 HOH HOH A . Z 7 HOH 45 231 45 HOH HOH A . Z 7 HOH 46 232 46 HOH HOH A . Z 7 HOH 47 233 47 HOH HOH A . Z 7 HOH 48 234 48 HOH HOH A . Z 7 HOH 49 235 49 HOH HOH A . Z 7 HOH 50 236 50 HOH HOH A . Z 7 HOH 51 237 51 HOH HOH A . Z 7 HOH 52 238 52 HOH HOH A . Z 7 HOH 53 239 53 HOH HOH A . Z 7 HOH 54 240 54 HOH HOH A . Z 7 HOH 55 241 55 HOH HOH A . Z 7 HOH 56 242 56 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A GLU 22 ? A GLU 21 ? 1_555 LI ? X LI . ? A LI 185 ? 1_555 OXT ? A LEU 163 ? A LEU 162 ? 1_555 122.0 ? 2 O ? A GLU 22 ? A GLU 21 ? 1_555 LI ? X LI . ? A LI 185 ? 1_555 O4 ? J MPD . ? A MPD 171 ? 1_555 100.5 ? 3 OXT ? A LEU 163 ? A LEU 162 ? 1_555 LI ? X LI . ? A LI 185 ? 1_555 O4 ? J MPD . ? A MPD 171 ? 1_555 101.6 ? 4 O ? Z HOH . ? A HOH 201 ? 1_555 LI ? Y LI . ? A LI 186 ? 1_555 O ? Z HOH . ? A HOH 215 ? 1_555 106.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-06-23 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-3000 'data collection' . ? 1 EPMR phasing . ? 2 REFMAC refinement 5.2.0005 ? 3 HKL-3000 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE2 A GLU 21 ? ? LI A LI 186 ? ? 1.63 2 1 OE2 A GLU 62 ? ? O A HOH 218 ? ? 2.02 3 1 O A HOH 226 ? ? O A HOH 235 ? ? 2.18 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A PRO 20 ? ? 1_555 LI A LI 185 ? ? 11_557 1.91 2 1 O2 A MPD 171 ? ? 1_555 LI A LI 185 ? ? 11_557 2.14 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 47 ? ? -172.45 24.80 2 1 TYR A 147 ? ? 93.98 103.60 3 1 ASN A 148 ? ? 59.62 -32.99 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 4 ? CG ? A GLU 5 CG 2 1 Y 1 A GLU 4 ? CD ? A GLU 5 CD 3 1 Y 1 A GLU 4 ? OE1 ? A GLU 5 OE1 4 1 Y 1 A GLU 4 ? OE2 ? A GLU 5 OE2 5 1 Y 0 A GLU 11 ? CD A A GLU 12 CD 6 1 Y 0 A GLU 11 ? OE1 A A GLU 12 OE1 7 1 Y 0 A GLU 11 ? OE2 A A GLU 12 OE2 8 1 Y 1 A ARG 35 ? CG ? A ARG 36 CG 9 1 Y 1 A ARG 35 ? CD ? A ARG 36 CD 10 1 Y 1 A ARG 35 ? NE ? A ARG 36 NE 11 1 Y 1 A ARG 35 ? CZ ? A ARG 36 CZ 12 1 Y 1 A ARG 35 ? NH1 ? A ARG 36 NH1 13 1 Y 1 A ARG 35 ? NH2 ? A ARG 36 NH2 14 1 Y 1 A PHE 36 ? CG ? A PHE 37 CG 15 1 Y 1 A PHE 36 ? CD1 ? A PHE 37 CD1 16 1 Y 1 A PHE 36 ? CD2 ? A PHE 37 CD2 17 1 Y 1 A PHE 36 ? CE1 ? A PHE 37 CE1 18 1 Y 1 A PHE 36 ? CE2 ? A PHE 37 CE2 19 1 Y 1 A PHE 36 ? CZ ? A PHE 37 CZ 20 1 Y 1 A TYR 46 ? CG ? A TYR 47 CG 21 1 Y 1 A TYR 46 ? CD1 ? A TYR 47 CD1 22 1 Y 1 A TYR 46 ? CD2 ? A TYR 47 CD2 23 1 Y 1 A TYR 46 ? CE1 ? A TYR 47 CE1 24 1 Y 1 A TYR 46 ? CE2 ? A TYR 47 CE2 25 1 Y 1 A TYR 46 ? CZ ? A TYR 47 CZ 26 1 Y 1 A TYR 46 ? OH ? A TYR 47 OH 27 1 Y 1 A ASN 47 ? CG ? A ASN 48 CG 28 1 Y 1 A ASN 47 ? OD1 ? A ASN 48 OD1 29 1 Y 1 A ASN 47 ? ND2 ? A ASN 48 ND2 30 1 Y 1 A THR 146 ? OG1 ? A THR 147 OG1 31 1 Y 1 A THR 146 ? CG2 ? A THR 147 CG2 32 1 Y 1 A TYR 147 ? CG ? A TYR 148 CG 33 1 Y 1 A TYR 147 ? CD1 ? A TYR 148 CD1 34 1 Y 1 A TYR 147 ? CD2 ? A TYR 148 CD2 35 1 Y 1 A TYR 147 ? CE1 ? A TYR 148 CE1 36 1 Y 1 A TYR 147 ? CE2 ? A TYR 148 CE2 37 1 Y 1 A TYR 147 ? CZ ? A TYR 148 CZ 38 1 Y 1 A TYR 147 ? OH ? A TYR 148 OH 39 1 Y 1 A ASN 148 ? CG ? A ASN 149 CG 40 1 Y 1 A ASN 148 ? OD1 ? A ASN 149 OD1 41 1 Y 1 A ASN 148 ? ND2 ? A ASN 149 ND2 42 1 N 1 A SDS 168 ? S ? G SDS 1 S 43 1 N 1 A SDS 168 ? O1S ? G SDS 1 O1S 44 1 N 1 A SDS 168 ? O2S ? G SDS 1 O2S 45 1 N 1 A SDS 168 ? O3S ? G SDS 1 O3S 46 1 N 1 A SDS 168 ? O4 ? G SDS 1 O4 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A TYR 38 ? A TYR 39 2 1 Y 1 A ASP 39 ? A ASP 40 3 1 Y 1 A LYS 40 ? A LYS 41 4 1 Y 1 A GLU 41 ? A GLU 42 5 1 Y 1 A LYS 42 ? A LYS 43 6 1 Y 1 A THR 43 ? A THR 44 7 1 Y 1 A ASP 44 ? A ASP 45 8 1 Y 1 A ARG 45 ? A ARG 46 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LI LI LI N N 191 LYS N N N N 192 LYS CA C N S 193 LYS C C N N 194 LYS O O N N 195 LYS CB C N N 196 LYS CG C N N 197 LYS CD C N N 198 LYS CE C N N 199 LYS NZ N N N 200 LYS OXT O N N 201 LYS H H N N 202 LYS H2 H N N 203 LYS HA H N N 204 LYS HB2 H N N 205 LYS HB3 H N N 206 LYS HG2 H N N 207 LYS HG3 H N N 208 LYS HD2 H N N 209 LYS HD3 H N N 210 LYS HE2 H N N 211 LYS HE3 H N N 212 LYS HZ1 H N N 213 LYS HZ2 H N N 214 LYS HZ3 H N N 215 LYS HXT H N N 216 MET N N N N 217 MET CA C N S 218 MET C C N N 219 MET O O N N 220 MET CB C N N 221 MET CG C N N 222 MET SD S N N 223 MET CE C N N 224 MET OXT O N N 225 MET H H N N 226 MET H2 H N N 227 MET HA H N N 228 MET HB2 H N N 229 MET HB3 H N N 230 MET HG2 H N N 231 MET HG3 H N N 232 MET HE1 H N N 233 MET HE2 H N N 234 MET HE3 H N N 235 MET HXT H N N 236 MPD C1 C N N 237 MPD C2 C N N 238 MPD O2 O N N 239 MPD CM C N N 240 MPD C3 C N N 241 MPD C4 C N S 242 MPD O4 O N N 243 MPD C5 C N N 244 MPD H11 H N N 245 MPD H12 H N N 246 MPD H13 H N N 247 MPD HO2 H N N 248 MPD HM1 H N N 249 MPD HM2 H N N 250 MPD HM3 H N N 251 MPD H31 H N N 252 MPD H32 H N N 253 MPD H4 H N N 254 MPD HO4 H N N 255 MPD H51 H N N 256 MPD H52 H N N 257 MPD H53 H N N 258 MRD C1 C N N 259 MRD C2 C N N 260 MRD O2 O N N 261 MRD CM C N N 262 MRD C3 C N N 263 MRD C4 C N R 264 MRD O4 O N N 265 MRD C5 C N N 266 MRD H1C1 H N N 267 MRD H1C2 H N N 268 MRD H1C3 H N N 269 MRD H2 H N N 270 MRD HMC1 H N N 271 MRD HMC2 H N N 272 MRD HMC3 H N N 273 MRD H3C1 H N N 274 MRD H3C2 H N N 275 MRD H4 H N N 276 MRD HA H N N 277 MRD H5C1 H N N 278 MRD H5C2 H N N 279 MRD H5C3 H N N 280 PHE N N N N 281 PHE CA C N S 282 PHE C C N N 283 PHE O O N N 284 PHE CB C N N 285 PHE CG C Y N 286 PHE CD1 C Y N 287 PHE CD2 C Y N 288 PHE CE1 C Y N 289 PHE CE2 C Y N 290 PHE CZ C Y N 291 PHE OXT O N N 292 PHE H H N N 293 PHE H2 H N N 294 PHE HA H N N 295 PHE HB2 H N N 296 PHE HB3 H N N 297 PHE HD1 H N N 298 PHE HD2 H N N 299 PHE HE1 H N N 300 PHE HE2 H N N 301 PHE HZ H N N 302 PHE HXT H N N 303 PRO N N N N 304 PRO CA C N S 305 PRO C C N N 306 PRO O O N N 307 PRO CB C N N 308 PRO CG C N N 309 PRO CD C N N 310 PRO OXT O N N 311 PRO H H N N 312 PRO HA H N N 313 PRO HB2 H N N 314 PRO HB3 H N N 315 PRO HG2 H N N 316 PRO HG3 H N N 317 PRO HD2 H N N 318 PRO HD3 H N N 319 PRO HXT H N N 320 SDS S S N N 321 SDS O1S O N N 322 SDS O2S O N N 323 SDS O3S O N N 324 SDS O4 O N N 325 SDS C1 C N N 326 SDS C2 C N N 327 SDS C3 C N N 328 SDS C4 C N N 329 SDS C5 C N N 330 SDS C6 C N N 331 SDS C7 C N N 332 SDS C8 C N N 333 SDS C9 C N N 334 SDS C10 C N N 335 SDS C11 C N N 336 SDS C12 C N N 337 SDS H3S H N N 338 SDS H1C1 H N N 339 SDS H1C2 H N N 340 SDS H2C1 H N N 341 SDS H2C2 H N N 342 SDS H2C3 H N N 343 SDS H3C1 H N N 344 SDS H3C2 H N N 345 SDS H4C1 H N N 346 SDS H4C2 H N N 347 SDS H5C1 H N N 348 SDS H5C2 H N N 349 SDS H6C1 H N N 350 SDS H6C2 H N N 351 SDS H7C1 H N N 352 SDS H7C2 H N N 353 SDS H8C1 H N N 354 SDS H8C2 H N N 355 SDS H9C1 H N N 356 SDS H9C2 H N N 357 SDS H101 H N N 358 SDS H102 H N N 359 SDS H111 H N N 360 SDS H112 H N N 361 SDS H121 H N N 362 SDS H122 H N N 363 SER N N N N 364 SER CA C N S 365 SER C C N N 366 SER O O N N 367 SER CB C N N 368 SER OG O N N 369 SER OXT O N N 370 SER H H N N 371 SER H2 H N N 372 SER HA H N N 373 SER HB2 H N N 374 SER HB3 H N N 375 SER HG H N N 376 SER HXT H N N 377 SO4 S S N N 378 SO4 O1 O N N 379 SO4 O2 O N N 380 SO4 O3 O N N 381 SO4 O4 O N N 382 THR N N N N 383 THR CA C N S 384 THR C C N N 385 THR O O N N 386 THR CB C N R 387 THR OG1 O N N 388 THR CG2 C N N 389 THR OXT O N N 390 THR H H N N 391 THR H2 H N N 392 THR HA H N N 393 THR HB H N N 394 THR HG1 H N N 395 THR HG21 H N N 396 THR HG22 H N N 397 THR HG23 H N N 398 THR HXT H N N 399 TRP N N N N 400 TRP CA C N S 401 TRP C C N N 402 TRP O O N N 403 TRP CB C N N 404 TRP CG C Y N 405 TRP CD1 C Y N 406 TRP CD2 C Y N 407 TRP NE1 N Y N 408 TRP CE2 C Y N 409 TRP CE3 C Y N 410 TRP CZ2 C Y N 411 TRP CZ3 C Y N 412 TRP CH2 C Y N 413 TRP OXT O N N 414 TRP H H N N 415 TRP H2 H N N 416 TRP HA H N N 417 TRP HB2 H N N 418 TRP HB3 H N N 419 TRP HD1 H N N 420 TRP HE1 H N N 421 TRP HE3 H N N 422 TRP HZ2 H N N 423 TRP HZ3 H N N 424 TRP HH2 H N N 425 TRP HXT H N N 426 TYR N N N N 427 TYR CA C N S 428 TYR C C N N 429 TYR O O N N 430 TYR CB C N N 431 TYR CG C Y N 432 TYR CD1 C Y N 433 TYR CD2 C Y N 434 TYR CE1 C Y N 435 TYR CE2 C Y N 436 TYR CZ C Y N 437 TYR OH O N N 438 TYR OXT O N N 439 TYR H H N N 440 TYR H2 H N N 441 TYR HA H N N 442 TYR HB2 H N N 443 TYR HB3 H N N 444 TYR HD1 H N N 445 TYR HD2 H N N 446 TYR HE1 H N N 447 TYR HE2 H N N 448 TYR HH H N N 449 TYR HXT H N N 450 VAL N N N N 451 VAL CA C N S 452 VAL C C N N 453 VAL O O N N 454 VAL CB C N N 455 VAL CG1 C N N 456 VAL CG2 C N N 457 VAL OXT O N N 458 VAL H H N N 459 VAL H2 H N N 460 VAL HA H N N 461 VAL HB H N N 462 VAL HG11 H N N 463 VAL HG12 H N N 464 VAL HG13 H N N 465 VAL HG21 H N N 466 VAL HG22 H N N 467 VAL HG23 H N N 468 VAL HXT H N N 469 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 MPD C1 C2 sing N N 224 MPD C1 H11 sing N N 225 MPD C1 H12 sing N N 226 MPD C1 H13 sing N N 227 MPD C2 O2 sing N N 228 MPD C2 CM sing N N 229 MPD C2 C3 sing N N 230 MPD O2 HO2 sing N N 231 MPD CM HM1 sing N N 232 MPD CM HM2 sing N N 233 MPD CM HM3 sing N N 234 MPD C3 C4 sing N N 235 MPD C3 H31 sing N N 236 MPD C3 H32 sing N N 237 MPD C4 O4 sing N N 238 MPD C4 C5 sing N N 239 MPD C4 H4 sing N N 240 MPD O4 HO4 sing N N 241 MPD C5 H51 sing N N 242 MPD C5 H52 sing N N 243 MPD C5 H53 sing N N 244 MRD C1 C2 sing N N 245 MRD C1 H1C1 sing N N 246 MRD C1 H1C2 sing N N 247 MRD C1 H1C3 sing N N 248 MRD C2 O2 sing N N 249 MRD C2 CM sing N N 250 MRD C2 C3 sing N N 251 MRD O2 H2 sing N N 252 MRD CM HMC1 sing N N 253 MRD CM HMC2 sing N N 254 MRD CM HMC3 sing N N 255 MRD C3 C4 sing N N 256 MRD C3 H3C1 sing N N 257 MRD C3 H3C2 sing N N 258 MRD C4 O4 sing N N 259 MRD C4 C5 sing N N 260 MRD C4 H4 sing N N 261 MRD O4 HA sing N N 262 MRD C5 H5C1 sing N N 263 MRD C5 H5C2 sing N N 264 MRD C5 H5C3 sing N N 265 PHE N CA sing N N 266 PHE N H sing N N 267 PHE N H2 sing N N 268 PHE CA C sing N N 269 PHE CA CB sing N N 270 PHE CA HA sing N N 271 PHE C O doub N N 272 PHE C OXT sing N N 273 PHE CB CG sing N N 274 PHE CB HB2 sing N N 275 PHE CB HB3 sing N N 276 PHE CG CD1 doub Y N 277 PHE CG CD2 sing Y N 278 PHE CD1 CE1 sing Y N 279 PHE CD1 HD1 sing N N 280 PHE CD2 CE2 doub Y N 281 PHE CD2 HD2 sing N N 282 PHE CE1 CZ doub Y N 283 PHE CE1 HE1 sing N N 284 PHE CE2 CZ sing Y N 285 PHE CE2 HE2 sing N N 286 PHE CZ HZ sing N N 287 PHE OXT HXT sing N N 288 PRO N CA sing N N 289 PRO N CD sing N N 290 PRO N H sing N N 291 PRO CA C sing N N 292 PRO CA CB sing N N 293 PRO CA HA sing N N 294 PRO C O doub N N 295 PRO C OXT sing N N 296 PRO CB CG sing N N 297 PRO CB HB2 sing N N 298 PRO CB HB3 sing N N 299 PRO CG CD sing N N 300 PRO CG HG2 sing N N 301 PRO CG HG3 sing N N 302 PRO CD HD2 sing N N 303 PRO CD HD3 sing N N 304 PRO OXT HXT sing N N 305 SDS S O1S doub N N 306 SDS S O2S sing N N 307 SDS S O3S sing N N 308 SDS S O4 doub N N 309 SDS O2S C1 sing N N 310 SDS O3S H3S sing N N 311 SDS C1 C12 sing N N 312 SDS C1 H1C1 sing N N 313 SDS C1 H1C2 sing N N 314 SDS C2 C3 sing N N 315 SDS C2 H2C1 sing N N 316 SDS C2 H2C2 sing N N 317 SDS C2 H2C3 sing N N 318 SDS C3 C4 sing N N 319 SDS C3 H3C1 sing N N 320 SDS C3 H3C2 sing N N 321 SDS C4 C5 sing N N 322 SDS C4 H4C1 sing N N 323 SDS C4 H4C2 sing N N 324 SDS C5 C6 sing N N 325 SDS C5 H5C1 sing N N 326 SDS C5 H5C2 sing N N 327 SDS C6 C7 sing N N 328 SDS C6 H6C1 sing N N 329 SDS C6 H6C2 sing N N 330 SDS C7 C8 sing N N 331 SDS C7 H7C1 sing N N 332 SDS C7 H7C2 sing N N 333 SDS C8 C9 sing N N 334 SDS C8 H8C1 sing N N 335 SDS C8 H8C2 sing N N 336 SDS C9 C10 sing N N 337 SDS C9 H9C1 sing N N 338 SDS C9 H9C2 sing N N 339 SDS C10 C11 sing N N 340 SDS C10 H101 sing N N 341 SDS C10 H102 sing N N 342 SDS C11 C12 sing N N 343 SDS C11 H111 sing N N 344 SDS C11 H112 sing N N 345 SDS C12 H121 sing N N 346 SDS C12 H122 sing N N 347 SER N CA sing N N 348 SER N H sing N N 349 SER N H2 sing N N 350 SER CA C sing N N 351 SER CA CB sing N N 352 SER CA HA sing N N 353 SER C O doub N N 354 SER C OXT sing N N 355 SER CB OG sing N N 356 SER CB HB2 sing N N 357 SER CB HB3 sing N N 358 SER OG HG sing N N 359 SER OXT HXT sing N N 360 SO4 S O1 doub N N 361 SO4 S O2 doub N N 362 SO4 S O3 sing N N 363 SO4 S O4 sing N N 364 THR N CA sing N N 365 THR N H sing N N 366 THR N H2 sing N N 367 THR CA C sing N N 368 THR CA CB sing N N 369 THR CA HA sing N N 370 THR C O doub N N 371 THR C OXT sing N N 372 THR CB OG1 sing N N 373 THR CB CG2 sing N N 374 THR CB HB sing N N 375 THR OG1 HG1 sing N N 376 THR CG2 HG21 sing N N 377 THR CG2 HG22 sing N N 378 THR CG2 HG23 sing N N 379 THR OXT HXT sing N N 380 TRP N CA sing N N 381 TRP N H sing N N 382 TRP N H2 sing N N 383 TRP CA C sing N N 384 TRP CA CB sing N N 385 TRP CA HA sing N N 386 TRP C O doub N N 387 TRP C OXT sing N N 388 TRP CB CG sing N N 389 TRP CB HB2 sing N N 390 TRP CB HB3 sing N N 391 TRP CG CD1 doub Y N 392 TRP CG CD2 sing Y N 393 TRP CD1 NE1 sing Y N 394 TRP CD1 HD1 sing N N 395 TRP CD2 CE2 doub Y N 396 TRP CD2 CE3 sing Y N 397 TRP NE1 CE2 sing Y N 398 TRP NE1 HE1 sing N N 399 TRP CE2 CZ2 sing Y N 400 TRP CE3 CZ3 doub Y N 401 TRP CE3 HE3 sing N N 402 TRP CZ2 CH2 doub Y N 403 TRP CZ2 HZ2 sing N N 404 TRP CZ3 CH2 sing Y N 405 TRP CZ3 HZ3 sing N N 406 TRP CH2 HH2 sing N N 407 TRP OXT HXT sing N N 408 TYR N CA sing N N 409 TYR N H sing N N 410 TYR N H2 sing N N 411 TYR CA C sing N N 412 TYR CA CB sing N N 413 TYR CA HA sing N N 414 TYR C O doub N N 415 TYR C OXT sing N N 416 TYR CB CG sing N N 417 TYR CB HB2 sing N N 418 TYR CB HB3 sing N N 419 TYR CG CD1 doub Y N 420 TYR CG CD2 sing Y N 421 TYR CD1 CE1 sing Y N 422 TYR CD1 HD1 sing N N 423 TYR CD2 CE2 doub Y N 424 TYR CD2 HD2 sing N N 425 TYR CE1 CZ doub Y N 426 TYR CE1 HE1 sing N N 427 TYR CE2 CZ sing Y N 428 TYR CE2 HE2 sing N N 429 TYR CZ OH sing N N 430 TYR OH HH sing N N 431 TYR OXT HXT sing N N 432 VAL N CA sing N N 433 VAL N H sing N N 434 VAL N H2 sing N N 435 VAL CA C sing N N 436 VAL CA CB sing N N 437 VAL CA HA sing N N 438 VAL C O doub N N 439 VAL C OXT sing N N 440 VAL CB CG1 sing N N 441 VAL CB CG2 sing N N 442 VAL CB HB sing N N 443 VAL CG1 HG11 sing N N 444 VAL CG1 HG12 sing N N 445 VAL CG1 HG13 sing N N 446 VAL CG2 HG21 sing N N 447 VAL CG2 HG22 sing N N 448 VAL CG2 HG23 sing N N 449 VAL OXT HXT sing N N 450 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'DODECYL SULFATE' SDS 3 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD 4 '(4R)-2-METHYLPENTANE-2,4-DIOL' MRD 5 'SULFATE ION' SO4 6 'LITHIUM ION' LI 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1THQ _pdbx_initial_refinement_model.details 'PDB entry 1THQ' #