data_3GSM # _entry.id 3GSM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.378 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3GSM pdb_00003gsm 10.2210/pdb3gsm/pdb RCSB RCSB052258 ? ? WWPDB D_1000052258 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2OXN . unspecified PDB 3GS6 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3GSM _pdbx_database_status.recvd_initial_deposition_date 2009-03-27 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Balcewich, M.D.' 1 'Mark, B.L.' 2 # _citation.id primary _citation.title ;Insight into a strategy for attenuating AmpC-mediated beta-lactam resistance: structural basis for selective inhibition of the glycoside hydrolase NagZ. ; _citation.journal_abbrev 'Protein Sci.' _citation.journal_volume 18 _citation.page_first 1541 _citation.page_last 1551 _citation.year 2009 _citation.journal_id_ASTM PRCIEI _citation.country US _citation.journal_id_ISSN 0961-8368 _citation.journal_id_CSD 0795 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19499593 _citation.pdbx_database_id_DOI 10.1002/pro.137 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Balcewich, M.D.' 1 ? primary 'Stubbs, K.A.' 2 ? primary 'He, Y.' 3 ? primary 'James, T.W.' 4 ? primary 'Davies, G.J.' 5 ? primary 'Vocadlo, D.J.' 6 ? primary 'Mark, B.L.' 7 ? # _cell.entry_id 3GSM _cell.length_a 47.980 _cell.length_b 86.440 _cell.length_c 86.440 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3GSM _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Beta-hexosaminidase 37714.848 1 3.2.1.52 'E19A, Q22A, K54A' ? ? 2 non-polymer syn '[[(3R,4R,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-(pentanoylamino)oxan-2-ylidene]amino] N-phenylcarbamate' 395.407 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 4 water nat water 18.015 128 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'N-acetyl-beta-glucosaminidase, Beta-N-acetylhexosaminidase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGPLWLDVAGYELSAEDRAILAHPTVGGVILFGRNYHDNQQLLALNKAIRQAAARPILIGVDQEGGRVQRFREGFSRIPP AQYYARAENGVELAEQGGWLMAAELIAHDVDLSFAPVLDMGFACKAIGNRAFGEDVQTVLKHSSAFLRGMKAVGMATTGK HFPGHGAVIADSHLETPYDERETIAQDMAIFRAQIEAGVLDAMMPAHVVYPHYDAQPASGSSYWLKQVLREELGFKGIVF SDDLSMEGAAVMGGPVERSHQALVAGCDMILICNKREAAVEVLDNLPIMEVPQAEALLKKQQFSYSELKRLERWQQASAN MQRLIEQFSEHHHHHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MGPLWLDVAGYELSAEDRAILAHPTVGGVILFGRNYHDNQQLLALNKAIRQAAARPILIGVDQEGGRVQRFREGFSRIPP AQYYARAENGVELAEQGGWLMAAELIAHDVDLSFAPVLDMGFACKAIGNRAFGEDVQTVLKHSSAFLRGMKAVGMATTGK HFPGHGAVIADSHLETPYDERETIAQDMAIFRAQIEAGVLDAMMPAHVVYPHYDAQPASGSSYWLKQVLREELGFKGIVF SDDLSMEGAAVMGGPVERSHQALVAGCDMILICNKREAAVEVLDNLPIMEVPQAEALLKKQQFSYSELKRLERWQQASAN MQRLIEQFSEHHHHHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 PRO n 1 4 LEU n 1 5 TRP n 1 6 LEU n 1 7 ASP n 1 8 VAL n 1 9 ALA n 1 10 GLY n 1 11 TYR n 1 12 GLU n 1 13 LEU n 1 14 SER n 1 15 ALA n 1 16 GLU n 1 17 ASP n 1 18 ARG n 1 19 ALA n 1 20 ILE n 1 21 LEU n 1 22 ALA n 1 23 HIS n 1 24 PRO n 1 25 THR n 1 26 VAL n 1 27 GLY n 1 28 GLY n 1 29 VAL n 1 30 ILE n 1 31 LEU n 1 32 PHE n 1 33 GLY n 1 34 ARG n 1 35 ASN n 1 36 TYR n 1 37 HIS n 1 38 ASP n 1 39 ASN n 1 40 GLN n 1 41 GLN n 1 42 LEU n 1 43 LEU n 1 44 ALA n 1 45 LEU n 1 46 ASN n 1 47 LYS n 1 48 ALA n 1 49 ILE n 1 50 ARG n 1 51 GLN n 1 52 ALA n 1 53 ALA n 1 54 ALA n 1 55 ARG n 1 56 PRO n 1 57 ILE n 1 58 LEU n 1 59 ILE n 1 60 GLY n 1 61 VAL n 1 62 ASP n 1 63 GLN n 1 64 GLU n 1 65 GLY n 1 66 GLY n 1 67 ARG n 1 68 VAL n 1 69 GLN n 1 70 ARG n 1 71 PHE n 1 72 ARG n 1 73 GLU n 1 74 GLY n 1 75 PHE n 1 76 SER n 1 77 ARG n 1 78 ILE n 1 79 PRO n 1 80 PRO n 1 81 ALA n 1 82 GLN n 1 83 TYR n 1 84 TYR n 1 85 ALA n 1 86 ARG n 1 87 ALA n 1 88 GLU n 1 89 ASN n 1 90 GLY n 1 91 VAL n 1 92 GLU n 1 93 LEU n 1 94 ALA n 1 95 GLU n 1 96 GLN n 1 97 GLY n 1 98 GLY n 1 99 TRP n 1 100 LEU n 1 101 MET n 1 102 ALA n 1 103 ALA n 1 104 GLU n 1 105 LEU n 1 106 ILE n 1 107 ALA n 1 108 HIS n 1 109 ASP n 1 110 VAL n 1 111 ASP n 1 112 LEU n 1 113 SER n 1 114 PHE n 1 115 ALA n 1 116 PRO n 1 117 VAL n 1 118 LEU n 1 119 ASP n 1 120 MET n 1 121 GLY n 1 122 PHE n 1 123 ALA n 1 124 CYS n 1 125 LYS n 1 126 ALA n 1 127 ILE n 1 128 GLY n 1 129 ASN n 1 130 ARG n 1 131 ALA n 1 132 PHE n 1 133 GLY n 1 134 GLU n 1 135 ASP n 1 136 VAL n 1 137 GLN n 1 138 THR n 1 139 VAL n 1 140 LEU n 1 141 LYS n 1 142 HIS n 1 143 SER n 1 144 SER n 1 145 ALA n 1 146 PHE n 1 147 LEU n 1 148 ARG n 1 149 GLY n 1 150 MET n 1 151 LYS n 1 152 ALA n 1 153 VAL n 1 154 GLY n 1 155 MET n 1 156 ALA n 1 157 THR n 1 158 THR n 1 159 GLY n 1 160 LYS n 1 161 HIS n 1 162 PHE n 1 163 PRO n 1 164 GLY n 1 165 HIS n 1 166 GLY n 1 167 ALA n 1 168 VAL n 1 169 ILE n 1 170 ALA n 1 171 ASP n 1 172 SER n 1 173 HIS n 1 174 LEU n 1 175 GLU n 1 176 THR n 1 177 PRO n 1 178 TYR n 1 179 ASP n 1 180 GLU n 1 181 ARG n 1 182 GLU n 1 183 THR n 1 184 ILE n 1 185 ALA n 1 186 GLN n 1 187 ASP n 1 188 MET n 1 189 ALA n 1 190 ILE n 1 191 PHE n 1 192 ARG n 1 193 ALA n 1 194 GLN n 1 195 ILE n 1 196 GLU n 1 197 ALA n 1 198 GLY n 1 199 VAL n 1 200 LEU n 1 201 ASP n 1 202 ALA n 1 203 MET n 1 204 MET n 1 205 PRO n 1 206 ALA n 1 207 HIS n 1 208 VAL n 1 209 VAL n 1 210 TYR n 1 211 PRO n 1 212 HIS n 1 213 TYR n 1 214 ASP n 1 215 ALA n 1 216 GLN n 1 217 PRO n 1 218 ALA n 1 219 SER n 1 220 GLY n 1 221 SER n 1 222 SER n 1 223 TYR n 1 224 TRP n 1 225 LEU n 1 226 LYS n 1 227 GLN n 1 228 VAL n 1 229 LEU n 1 230 ARG n 1 231 GLU n 1 232 GLU n 1 233 LEU n 1 234 GLY n 1 235 PHE n 1 236 LYS n 1 237 GLY n 1 238 ILE n 1 239 VAL n 1 240 PHE n 1 241 SER n 1 242 ASP n 1 243 ASP n 1 244 LEU n 1 245 SER n 1 246 MET n 1 247 GLU n 1 248 GLY n 1 249 ALA n 1 250 ALA n 1 251 VAL n 1 252 MET n 1 253 GLY n 1 254 GLY n 1 255 PRO n 1 256 VAL n 1 257 GLU n 1 258 ARG n 1 259 SER n 1 260 HIS n 1 261 GLN n 1 262 ALA n 1 263 LEU n 1 264 VAL n 1 265 ALA n 1 266 GLY n 1 267 CYS n 1 268 ASP n 1 269 MET n 1 270 ILE n 1 271 LEU n 1 272 ILE n 1 273 CYS n 1 274 ASN n 1 275 LYS n 1 276 ARG n 1 277 GLU n 1 278 ALA n 1 279 ALA n 1 280 VAL n 1 281 GLU n 1 282 VAL n 1 283 LEU n 1 284 ASP n 1 285 ASN n 1 286 LEU n 1 287 PRO n 1 288 ILE n 1 289 MET n 1 290 GLU n 1 291 VAL n 1 292 PRO n 1 293 GLN n 1 294 ALA n 1 295 GLU n 1 296 ALA n 1 297 LEU n 1 298 LEU n 1 299 LYS n 1 300 LYS n 1 301 GLN n 1 302 GLN n 1 303 PHE n 1 304 SER n 1 305 TYR n 1 306 SER n 1 307 GLU n 1 308 LEU n 1 309 LYS n 1 310 ARG n 1 311 LEU n 1 312 GLU n 1 313 ARG n 1 314 TRP n 1 315 GLN n 1 316 GLN n 1 317 ALA n 1 318 SER n 1 319 ALA n 1 320 ASN n 1 321 MET n 1 322 GLN n 1 323 ARG n 1 324 LEU n 1 325 ILE n 1 326 GLU n 1 327 GLN n 1 328 PHE n 1 329 SER n 1 330 GLU n 1 331 HIS n 1 332 HIS n 1 333 HIS n 1 334 HIS n 1 335 HIS n 1 336 HIS n 1 337 HIS n 1 338 HIS n 1 339 HIS n 1 340 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'family 3 glycoside hydrolase NagZ, nagZ, VC_0692' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'Vibrio cholerae O1 biovar eltor str. N16961' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Vibrio cholerae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 666 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)GOLD HTE' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NAGZ_VIBCH _struct_ref.pdbx_db_accession Q9KU37 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MGPLWLDVAGYELSAEDREILQHPTVGGVILFGRNYHDNQQLLALNKAIRQAAKRPILIGVDQEGGRVQRFREGFSRIPP AQYYARAENGVELAEQGGWLMAAELIAHDVDLSFAPVLDMGFACKAIGNRAFGEDVQTVLKHSSAFLRGMKAVGMATTGK HFPGHGAVIADSHLETPYDERETIAQDMAIFRAQIEAGVLDAMMPAHVVYPHYDAQPASGSSYWLKQVLREELGFKGIVF SDDLSMEGAAVMGGPVERSHQALVAGCDMILICNKREAAVEVLDNLPIMEVPQAEALLKKQQFSYSELKRLERWQQASAN MQRLIEQFSE ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3GSM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 330 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9KU37 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 330 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 330 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3GSM ALA A 19 ? UNP Q9KU37 GLU 19 'engineered mutation' 19 1 1 3GSM ALA A 22 ? UNP Q9KU37 GLN 22 'engineered mutation' 22 2 1 3GSM ALA A 54 ? UNP Q9KU37 LYS 54 'engineered mutation' 54 3 1 3GSM HIS A 331 ? UNP Q9KU37 ? ? 'expression tag' 331 4 1 3GSM HIS A 332 ? UNP Q9KU37 ? ? 'expression tag' 332 5 1 3GSM HIS A 333 ? UNP Q9KU37 ? ? 'expression tag' 333 6 1 3GSM HIS A 334 ? UNP Q9KU37 ? ? 'expression tag' 334 7 1 3GSM HIS A 335 ? UNP Q9KU37 ? ? 'expression tag' 335 8 1 3GSM HIS A 336 ? UNP Q9KU37 ? ? 'expression tag' 336 9 1 3GSM HIS A 337 ? UNP Q9KU37 ? ? 'expression tag' 337 10 1 3GSM HIS A 338 ? UNP Q9KU37 ? ? 'expression tag' 338 11 1 3GSM HIS A 339 ? UNP Q9KU37 ? ? 'expression tag' 339 12 1 3GSM HIS A 340 ? UNP Q9KU37 ? ? 'expression tag' 340 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 VPU non-polymer . '[[(3R,4R,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-(pentanoylamino)oxan-2-ylidene]amino] N-phenylcarbamate' N-Valeryl-PUGNAc 'C18 H25 N3 O7' 395.407 # _exptl.entry_id 3GSM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.38 _exptl_crystal.density_percent_sol 48.24 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.2 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '13% PEG 20,000, 10% glycerol, 100mM Bis-Tris pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 298K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV++' _diffrn_detector.pdbx_collection_date 2008-10-20 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RUH2R' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 # _reflns.entry_id 3GSM _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 61.08 _reflns.d_resolution_high 2.4 _reflns.number_obs 14482 _reflns.number_all 14609 _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.1 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 6.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.97 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.4 _reflns_shell.d_res_low 2.53 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.49 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.2 _reflns_shell.pdbx_redundancy 3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 3GSM _refine.ls_number_reflns_obs 13755 _refine.ls_number_reflns_all 15335 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 61.08 _refine.ls_d_res_high 2.40 _refine.ls_percent_reflns_obs 99.14 _refine.ls_R_factor_obs .21250 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work .20937 _refine.ls_R_factor_R_free .27174 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 727 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc .925 _refine.correlation_coeff_Fo_to_Fc_free .884 _refine.B_iso_mean 26.499 _refine.aniso_B[1][1] .10 _refine.aniso_B[2][2] -1.32 _refine.aniso_B[3][3] 1.21 _refine.aniso_B[1][2] .00 _refine.aniso_B[1][3] .00 _refine.aniso_B[2][3] .00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii .80 _refine.pdbx_solvent_shrinkage_radii .80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;The VPU residue, bound inhibitor N-valeryl PUGNAc, has missing atoms: OAQ CAP OAR NAO CAS CAT CAU CAV CAW CAX. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. ; _refine.pdbx_starting_model 2OXN _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R .485 _refine.pdbx_overall_ESU_R_Free .294 _refine.overall_SU_ML .219 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 9.329 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2512 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 30 _refine_hist.number_atoms_solvent 128 _refine_hist.number_atoms_total 2670 _refine_hist.d_res_high 2.40 _refine_hist.d_res_low 61.08 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d .011 .022 ? 2609 'X-RAY DIFFRACTION' ? r_bond_other_d .000 .020 ? 2384 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.311 1.970 ? 3521 'X-RAY DIFFRACTION' ? r_angle_other_deg .632 3.000 ? 5525 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.893 5.000 ? 321 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 36.705 23.984 ? 123 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.257 15.000 ? 430 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.779 15.000 ? 19 'X-RAY DIFFRACTION' ? r_chiral_restr .065 .200 ? 382 'X-RAY DIFFRACTION' ? r_gen_planes_refined .005 .021 ? 2917 'X-RAY DIFFRACTION' ? r_gen_planes_other .000 .020 ? 526 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it .523 1.500 ? 1604 'X-RAY DIFFRACTION' ? r_mcbond_other .091 1.500 ? 663 'X-RAY DIFFRACTION' ? r_mcangle_it .991 2.000 ? 2549 'X-RAY DIFFRACTION' ? r_scbond_it 1.461 3.000 ? 1005 'X-RAY DIFFRACTION' ? r_scangle_it 2.499 4.500 ? 972 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.400 _refine_ls_shell.d_res_low 2.462 _refine_ls_shell.number_reflns_R_work 979 _refine_ls_shell.R_factor_R_work .280 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free .368 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 58 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 3GSM _struct.title 'Vibrio cholerae family 3 glycoside hydrolase (NagZ) bound to N-Valeryl-PUGNAc' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3GSM _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text ;glycoside hydrolases, Cell cycle, Cell division, Cell shape, Cell wall biogenesis/degradation, Glycosidase, Hydrolase, Peptidoglycan synthesis ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details 'one biological molecule in the asymmetric unit' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 14 ? ALA A 22 ? SER A 14 ALA A 22 1 ? 9 HELX_P HELX_P2 2 PHE A 32 ? TYR A 36 ? PHE A 32 TYR A 36 5 ? 5 HELX_P HELX_P3 3 ASP A 38 ? ALA A 54 ? ASP A 38 ALA A 54 1 ? 17 HELX_P HELX_P4 4 TYR A 83 ? ALA A 87 ? TYR A 83 ALA A 87 5 ? 5 HELX_P HELX_P5 5 ASN A 89 ? ALA A 107 ? ASN A 89 ALA A 107 1 ? 19 HELX_P HELX_P6 6 ILE A 127 ? ALA A 131 ? ILE A 127 ALA A 131 5 ? 5 HELX_P HELX_P7 7 ASP A 135 ? VAL A 153 ? ASP A 135 VAL A 153 1 ? 19 HELX_P HELX_P8 8 ILE A 184 ? ALA A 197 ? ILE A 184 ALA A 197 1 ? 14 HELX_P HELX_P9 9 PRO A 217 ? GLY A 220 ? PRO A 217 GLY A 220 5 ? 4 HELX_P HELX_P10 10 SER A 221 ? LYS A 226 ? SER A 221 LYS A 226 1 ? 6 HELX_P HELX_P11 11 GLY A 254 ? GLY A 266 ? GLY A 254 GLY A 266 1 ? 13 HELX_P HELX_P12 12 LYS A 275 ? LEU A 286 ? LYS A 275 LEU A 286 1 ? 12 HELX_P HELX_P13 13 VAL A 291 ? LEU A 298 ? VAL A 291 LEU A 298 5 ? 8 HELX_P HELX_P14 14 SER A 304 ? LYS A 309 ? SER A 304 LYS A 309 1 ? 6 HELX_P HELX_P15 15 LEU A 311 ? GLN A 327 ? LEU A 311 GLN A 327 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ALA 115 A . ? ALA 115 A PRO 116 A ? PRO 116 A 1 14.45 2 LYS 160 A . ? LYS 160 A HIS 161 A ? HIS 161 A 1 8.30 3 PHE 162 A . ? PHE 162 A PRO 163 A ? PRO 163 A 1 -2.83 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 112 ? SER A 113 ? LEU A 112 SER A 113 A 2 LEU A 58 ? VAL A 61 ? LEU A 58 VAL A 61 A 3 VAL A 26 ? LEU A 31 ? VAL A 26 LEU A 31 A 4 LEU A 4 ? LEU A 6 ? LEU A 4 LEU A 6 A 5 MET A 269 ? LEU A 271 ? MET A 269 LEU A 271 A 6 ILE A 238 ? ASP A 243 ? ILE A 238 ASP A 243 A 7 ALA A 202 ? PRO A 205 ? ALA A 202 PRO A 205 A 8 THR A 158 ? PHE A 162 ? THR A 158 PHE A 162 B 1 GLN A 63 ? GLY A 65 ? GLN A 63 GLY A 65 B 2 VAL A 68 ? GLN A 69 ? VAL A 68 GLN A 69 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU A 112 ? O LEU A 112 N ILE A 59 ? N ILE A 59 A 2 3 O GLY A 60 ? O GLY A 60 N VAL A 29 ? N VAL A 29 A 3 4 O GLY A 27 ? O GLY A 27 N LEU A 4 ? N LEU A 4 A 4 5 N TRP A 5 ? N TRP A 5 O ILE A 270 ? O ILE A 270 A 5 6 O MET A 269 ? O MET A 269 N VAL A 239 ? N VAL A 239 A 6 7 O PHE A 240 ? O PHE A 240 N MET A 203 ? N MET A 203 A 7 8 O MET A 204 ? O MET A 204 N GLY A 159 ? N GLY A 159 B 1 2 N GLU A 64 ? N GLU A 64 O VAL A 68 ? O VAL A 68 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A VPU 341 ? 6 'BINDING SITE FOR RESIDUE VPU A 341' AC2 Software A GOL 343 ? 6 'BINDING SITE FOR RESIDUE GOL A 343' AC3 Software A GOL 344 ? 6 'BINDING SITE FOR RESIDUE GOL A 344' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ILE A 30 ? ILE A 30 . ? 1_555 ? 2 AC1 6 ASP A 62 ? ASP A 62 . ? 1_555 ? 3 AC1 6 ARG A 130 ? ARG A 130 . ? 1_555 ? 4 AC1 6 LYS A 160 ? LYS A 160 . ? 1_555 ? 5 AC1 6 HIS A 161 ? HIS A 161 . ? 1_555 ? 6 AC1 6 GOL D . ? GOL A 344 . ? 1_555 ? 7 AC2 6 ASP A 7 ? ASP A 7 . ? 1_555 ? 8 AC2 6 VAL A 8 ? VAL A 8 . ? 1_555 ? 9 AC2 6 ALA A 9 ? ALA A 9 . ? 1_555 ? 10 AC2 6 ARG A 34 ? ARG A 34 . ? 1_555 ? 11 AC2 6 ARG A 276 ? ARG A 276 . ? 1_555 ? 12 AC2 6 ILE A 288 ? ILE A 288 . ? 4_455 ? 13 AC3 6 ALA A 15 ? ALA A 15 . ? 4_455 ? 14 AC3 6 GLU A 16 ? GLU A 16 . ? 4_455 ? 15 AC3 6 LYS A 125 ? LYS A 125 . ? 1_555 ? 16 AC3 6 ALA A 126 ? ALA A 126 . ? 1_555 ? 17 AC3 6 VPU B . ? VPU A 341 . ? 1_555 ? 18 AC3 6 HOH E . ? HOH A 394 . ? 1_555 ? # _database_PDB_matrix.entry_id 3GSM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3GSM _atom_sites.fract_transf_matrix[1][1] 0.020842 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011569 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011569 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 GLY 2 2 2 GLY GLY A . n A 1 3 PRO 3 3 3 PRO PRO A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 TRP 5 5 5 TRP TRP A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 ASP 7 7 7 ASP ASP A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 TYR 11 11 11 TYR TYR A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 ARG 18 18 18 ARG ARG A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 ILE 20 20 20 ILE ILE A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 HIS 23 23 23 HIS HIS A . n A 1 24 PRO 24 24 24 PRO PRO A . n A 1 25 THR 25 25 25 THR THR A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 PHE 32 32 32 PHE PHE A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 ASN 35 35 35 ASN ASN A . n A 1 36 TYR 36 36 36 TYR TYR A . n A 1 37 HIS 37 37 37 HIS HIS A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 ASN 39 39 39 ASN ASN A . n A 1 40 GLN 40 40 40 GLN GLN A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 ASN 46 46 46 ASN ASN A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 ALA 48 48 48 ALA ALA A . n A 1 49 ILE 49 49 49 ILE ILE A . n A 1 50 ARG 50 50 50 ARG ARG A . n A 1 51 GLN 51 51 51 GLN GLN A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 ALA 54 54 54 ALA ALA A . n A 1 55 ARG 55 55 55 ARG ARG A . n A 1 56 PRO 56 56 56 PRO PRO A . n A 1 57 ILE 57 57 57 ILE ILE A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 ILE 59 59 59 ILE ILE A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 VAL 61 61 61 VAL VAL A . n A 1 62 ASP 62 62 62 ASP ASP A . n A 1 63 GLN 63 63 63 GLN GLN A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 ARG 67 67 67 ARG ARG A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 GLN 69 69 69 GLN GLN A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 PHE 71 71 71 PHE PHE A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 PHE 75 75 75 PHE PHE A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 ARG 77 77 77 ARG ARG A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 PRO 80 80 80 PRO PRO A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 GLN 82 82 82 GLN GLN A . n A 1 83 TYR 83 83 83 TYR TYR A . n A 1 84 TYR 84 84 84 TYR TYR A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 ARG 86 86 86 ARG ARG A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 GLU 88 88 88 GLU GLU A . n A 1 89 ASN 89 89 89 ASN ASN A . n A 1 90 GLY 90 90 90 GLY GLY A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 ALA 94 94 94 ALA ALA A . n A 1 95 GLU 95 95 95 GLU GLU A . n A 1 96 GLN 96 96 96 GLN GLN A . n A 1 97 GLY 97 97 97 GLY GLY A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 TRP 99 99 99 TRP TRP A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 MET 101 101 101 MET MET A . n A 1 102 ALA 102 102 102 ALA ALA A . n A 1 103 ALA 103 103 103 ALA ALA A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 HIS 108 108 108 HIS HIS A . n A 1 109 ASP 109 109 109 ASP ASP A . n A 1 110 VAL 110 110 110 VAL VAL A . n A 1 111 ASP 111 111 111 ASP ASP A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 SER 113 113 113 SER SER A . n A 1 114 PHE 114 114 114 PHE PHE A . n A 1 115 ALA 115 115 115 ALA ALA A . n A 1 116 PRO 116 116 116 PRO PRO A . n A 1 117 VAL 117 117 117 VAL VAL A . n A 1 118 LEU 118 118 118 LEU LEU A . n A 1 119 ASP 119 119 119 ASP ASP A . n A 1 120 MET 120 120 120 MET MET A . n A 1 121 GLY 121 121 121 GLY GLY A . n A 1 122 PHE 122 122 122 PHE PHE A . n A 1 123 ALA 123 123 123 ALA ALA A . n A 1 124 CYS 124 124 124 CYS CYS A . n A 1 125 LYS 125 125 125 LYS LYS A . n A 1 126 ALA 126 126 126 ALA ALA A . n A 1 127 ILE 127 127 127 ILE ILE A . n A 1 128 GLY 128 128 128 GLY GLY A . n A 1 129 ASN 129 129 129 ASN ASN A . n A 1 130 ARG 130 130 130 ARG ARG A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 PHE 132 132 132 PHE PHE A . n A 1 133 GLY 133 133 133 GLY GLY A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 ASP 135 135 135 ASP ASP A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 GLN 137 137 137 GLN GLN A . n A 1 138 THR 138 138 138 THR THR A . n A 1 139 VAL 139 139 139 VAL VAL A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 LYS 141 141 141 LYS LYS A . n A 1 142 HIS 142 142 142 HIS HIS A . n A 1 143 SER 143 143 143 SER SER A . n A 1 144 SER 144 144 144 SER SER A . n A 1 145 ALA 145 145 145 ALA ALA A . n A 1 146 PHE 146 146 146 PHE PHE A . n A 1 147 LEU 147 147 147 LEU LEU A . n A 1 148 ARG 148 148 148 ARG ARG A . n A 1 149 GLY 149 149 149 GLY GLY A . n A 1 150 MET 150 150 150 MET MET A . n A 1 151 LYS 151 151 151 LYS LYS A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 VAL 153 153 153 VAL VAL A . n A 1 154 GLY 154 154 154 GLY GLY A . n A 1 155 MET 155 155 155 MET MET A . n A 1 156 ALA 156 156 156 ALA ALA A . n A 1 157 THR 157 157 157 THR THR A . n A 1 158 THR 158 158 158 THR THR A . n A 1 159 GLY 159 159 159 GLY GLY A . n A 1 160 LYS 160 160 160 LYS LYS A . n A 1 161 HIS 161 161 161 HIS HIS A . n A 1 162 PHE 162 162 162 PHE PHE A . n A 1 163 PRO 163 163 163 PRO PRO A . n A 1 164 GLY 164 164 164 GLY GLY A . n A 1 165 HIS 165 165 165 HIS HIS A . n A 1 166 GLY 166 166 166 GLY GLY A . n A 1 167 ALA 167 167 167 ALA ALA A . n A 1 168 VAL 168 168 168 VAL VAL A . n A 1 169 ILE 169 169 169 ILE ILE A . n A 1 170 ALA 170 170 170 ALA ALA A . n A 1 171 ASP 171 171 171 ASP ASP A . n A 1 172 SER 172 172 ? ? ? A . n A 1 173 HIS 173 173 173 HIS HIS A . n A 1 174 LEU 174 174 174 LEU LEU A . n A 1 175 GLU 175 175 175 GLU GLU A . n A 1 176 THR 176 176 176 THR THR A . n A 1 177 PRO 177 177 177 PRO PRO A . n A 1 178 TYR 178 178 178 TYR TYR A . n A 1 179 ASP 179 179 179 ASP ASP A . n A 1 180 GLU 180 180 180 GLU GLU A . n A 1 181 ARG 181 181 181 ARG ARG A . n A 1 182 GLU 182 182 182 GLU GLU A . n A 1 183 THR 183 183 183 THR THR A . n A 1 184 ILE 184 184 184 ILE ILE A . n A 1 185 ALA 185 185 185 ALA ALA A . n A 1 186 GLN 186 186 186 GLN GLN A . n A 1 187 ASP 187 187 187 ASP ASP A . n A 1 188 MET 188 188 188 MET MET A . n A 1 189 ALA 189 189 189 ALA ALA A . n A 1 190 ILE 190 190 190 ILE ILE A . n A 1 191 PHE 191 191 191 PHE PHE A . n A 1 192 ARG 192 192 192 ARG ARG A . n A 1 193 ALA 193 193 193 ALA ALA A . n A 1 194 GLN 194 194 194 GLN GLN A . n A 1 195 ILE 195 195 195 ILE ILE A . n A 1 196 GLU 196 196 196 GLU GLU A . n A 1 197 ALA 197 197 197 ALA ALA A . n A 1 198 GLY 198 198 198 GLY GLY A . n A 1 199 VAL 199 199 199 VAL VAL A . n A 1 200 LEU 200 200 200 LEU LEU A . n A 1 201 ASP 201 201 201 ASP ASP A . n A 1 202 ALA 202 202 202 ALA ALA A . n A 1 203 MET 203 203 203 MET MET A . n A 1 204 MET 204 204 204 MET MET A . n A 1 205 PRO 205 205 205 PRO PRO A . n A 1 206 ALA 206 206 206 ALA ALA A . n A 1 207 HIS 207 207 207 HIS HIS A . n A 1 208 VAL 208 208 208 VAL VAL A . n A 1 209 VAL 209 209 209 VAL VAL A . n A 1 210 TYR 210 210 210 TYR TYR A . n A 1 211 PRO 211 211 211 PRO PRO A . n A 1 212 HIS 212 212 212 HIS HIS A . n A 1 213 TYR 213 213 213 TYR TYR A . n A 1 214 ASP 214 214 214 ASP ASP A . n A 1 215 ALA 215 215 215 ALA ALA A . n A 1 216 GLN 216 216 216 GLN GLN A . n A 1 217 PRO 217 217 217 PRO PRO A . n A 1 218 ALA 218 218 218 ALA ALA A . n A 1 219 SER 219 219 219 SER SER A . n A 1 220 GLY 220 220 220 GLY GLY A . n A 1 221 SER 221 221 221 SER SER A . n A 1 222 SER 222 222 222 SER SER A . n A 1 223 TYR 223 223 223 TYR TYR A . n A 1 224 TRP 224 224 224 TRP TRP A . n A 1 225 LEU 225 225 225 LEU LEU A . n A 1 226 LYS 226 226 226 LYS LYS A . n A 1 227 GLN 227 227 227 GLN GLN A . n A 1 228 VAL 228 228 228 VAL VAL A . n A 1 229 LEU 229 229 229 LEU LEU A . n A 1 230 ARG 230 230 230 ARG ARG A . n A 1 231 GLU 231 231 231 GLU GLU A . n A 1 232 GLU 232 232 232 GLU GLU A . n A 1 233 LEU 233 233 233 LEU LEU A . n A 1 234 GLY 234 234 234 GLY GLY A . n A 1 235 PHE 235 235 235 PHE PHE A . n A 1 236 LYS 236 236 236 LYS LYS A . n A 1 237 GLY 237 237 237 GLY GLY A . n A 1 238 ILE 238 238 238 ILE ILE A . n A 1 239 VAL 239 239 239 VAL VAL A . n A 1 240 PHE 240 240 240 PHE PHE A . n A 1 241 SER 241 241 241 SER SER A . n A 1 242 ASP 242 242 242 ASP ASP A . n A 1 243 ASP 243 243 243 ASP ASP A . n A 1 244 LEU 244 244 244 LEU LEU A . n A 1 245 SER 245 245 245 SER SER A . n A 1 246 MET 246 246 246 MET MET A . n A 1 247 GLU 247 247 ? ? ? A . n A 1 248 GLY 248 248 ? ? ? A . n A 1 249 ALA 249 249 ? ? ? A . n A 1 250 ALA 250 250 ? ? ? A . n A 1 251 VAL 251 251 251 VAL VAL A . n A 1 252 MET 252 252 252 MET MET A . n A 1 253 GLY 253 253 253 GLY GLY A . n A 1 254 GLY 254 254 254 GLY GLY A . n A 1 255 PRO 255 255 255 PRO PRO A . n A 1 256 VAL 256 256 256 VAL VAL A . n A 1 257 GLU 257 257 257 GLU GLU A . n A 1 258 ARG 258 258 258 ARG ARG A . n A 1 259 SER 259 259 259 SER SER A . n A 1 260 HIS 260 260 260 HIS HIS A . n A 1 261 GLN 261 261 261 GLN GLN A . n A 1 262 ALA 262 262 262 ALA ALA A . n A 1 263 LEU 263 263 263 LEU LEU A . n A 1 264 VAL 264 264 264 VAL VAL A . n A 1 265 ALA 265 265 265 ALA ALA A . n A 1 266 GLY 266 266 266 GLY GLY A . n A 1 267 CYS 267 267 267 CYS CYS A . n A 1 268 ASP 268 268 268 ASP ASP A . n A 1 269 MET 269 269 269 MET MET A . n A 1 270 ILE 270 270 270 ILE ILE A . n A 1 271 LEU 271 271 271 LEU LEU A . n A 1 272 ILE 272 272 272 ILE ILE A . n A 1 273 CYS 273 273 273 CYS CYS A . n A 1 274 ASN 274 274 274 ASN ASN A . n A 1 275 LYS 275 275 275 LYS LYS A . n A 1 276 ARG 276 276 276 ARG ARG A . n A 1 277 GLU 277 277 277 GLU GLU A . n A 1 278 ALA 278 278 278 ALA ALA A . n A 1 279 ALA 279 279 279 ALA ALA A . n A 1 280 VAL 280 280 280 VAL VAL A . n A 1 281 GLU 281 281 281 GLU GLU A . n A 1 282 VAL 282 282 282 VAL VAL A . n A 1 283 LEU 283 283 283 LEU LEU A . n A 1 284 ASP 284 284 284 ASP ASP A . n A 1 285 ASN 285 285 285 ASN ASN A . n A 1 286 LEU 286 286 286 LEU LEU A . n A 1 287 PRO 287 287 287 PRO PRO A . n A 1 288 ILE 288 288 288 ILE ILE A . n A 1 289 MET 289 289 289 MET MET A . n A 1 290 GLU 290 290 290 GLU GLU A . n A 1 291 VAL 291 291 291 VAL VAL A . n A 1 292 PRO 292 292 292 PRO PRO A . n A 1 293 GLN 293 293 293 GLN GLN A . n A 1 294 ALA 294 294 294 ALA ALA A . n A 1 295 GLU 295 295 295 GLU GLU A . n A 1 296 ALA 296 296 296 ALA ALA A . n A 1 297 LEU 297 297 297 LEU LEU A . n A 1 298 LEU 298 298 298 LEU LEU A . n A 1 299 LYS 299 299 299 LYS LYS A . n A 1 300 LYS 300 300 300 LYS LYS A . n A 1 301 GLN 301 301 301 GLN GLN A . n A 1 302 GLN 302 302 302 GLN GLN A . n A 1 303 PHE 303 303 303 PHE PHE A . n A 1 304 SER 304 304 304 SER SER A . n A 1 305 TYR 305 305 305 TYR TYR A . n A 1 306 SER 306 306 306 SER SER A . n A 1 307 GLU 307 307 307 GLU GLU A . n A 1 308 LEU 308 308 308 LEU LEU A . n A 1 309 LYS 309 309 309 LYS LYS A . n A 1 310 ARG 310 310 310 ARG ARG A . n A 1 311 LEU 311 311 311 LEU LEU A . n A 1 312 GLU 312 312 312 GLU GLU A . n A 1 313 ARG 313 313 313 ARG ARG A . n A 1 314 TRP 314 314 314 TRP TRP A . n A 1 315 GLN 315 315 315 GLN GLN A . n A 1 316 GLN 316 316 316 GLN GLN A . n A 1 317 ALA 317 317 317 ALA ALA A . n A 1 318 SER 318 318 318 SER SER A . n A 1 319 ALA 319 319 319 ALA ALA A . n A 1 320 ASN 320 320 320 ASN ASN A . n A 1 321 MET 321 321 321 MET MET A . n A 1 322 GLN 322 322 322 GLN GLN A . n A 1 323 ARG 323 323 323 ARG ARG A . n A 1 324 LEU 324 324 324 LEU LEU A . n A 1 325 ILE 325 325 325 ILE ILE A . n A 1 326 GLU 326 326 326 GLU GLU A . n A 1 327 GLN 327 327 327 GLN GLN A . n A 1 328 PHE 328 328 328 PHE PHE A . n A 1 329 SER 329 329 329 SER SER A . n A 1 330 GLU 330 330 ? ? ? A . n A 1 331 HIS 331 331 ? ? ? A . n A 1 332 HIS 332 332 ? ? ? A . n A 1 333 HIS 333 333 ? ? ? A . n A 1 334 HIS 334 334 ? ? ? A . n A 1 335 HIS 335 335 ? ? ? A . n A 1 336 HIS 336 336 ? ? ? A . n A 1 337 HIS 337 337 ? ? ? A . n A 1 338 HIS 338 338 ? ? ? A . n A 1 339 HIS 339 339 ? ? ? A . n A 1 340 HIS 340 340 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 VPU 1 341 341 VPU VPU A . C 3 GOL 1 343 343 GOL GOL A . D 3 GOL 1 344 344 GOL GOL A . E 4 HOH 1 345 345 HOH HOH A . E 4 HOH 2 346 346 HOH HOH A . E 4 HOH 3 347 347 HOH HOH A . E 4 HOH 4 348 348 HOH HOH A . E 4 HOH 5 349 349 HOH HOH A . E 4 HOH 6 350 350 HOH HOH A . E 4 HOH 7 351 351 HOH HOH A . E 4 HOH 8 352 352 HOH HOH A . E 4 HOH 9 353 353 HOH HOH A . E 4 HOH 10 354 354 HOH HOH A . E 4 HOH 11 355 355 HOH HOH A . E 4 HOH 12 356 356 HOH HOH A . E 4 HOH 13 357 357 HOH HOH A . E 4 HOH 14 358 358 HOH HOH A . E 4 HOH 15 359 359 HOH HOH A . E 4 HOH 16 360 360 HOH HOH A . E 4 HOH 17 361 361 HOH HOH A . E 4 HOH 18 362 362 HOH HOH A . E 4 HOH 19 363 363 HOH HOH A . E 4 HOH 20 364 364 HOH HOH A . E 4 HOH 21 365 365 HOH HOH A . E 4 HOH 22 366 366 HOH HOH A . E 4 HOH 23 367 367 HOH HOH A . E 4 HOH 24 368 368 HOH HOH A . E 4 HOH 25 369 369 HOH HOH A . E 4 HOH 26 370 370 HOH HOH A . E 4 HOH 27 371 371 HOH HOH A . E 4 HOH 28 372 372 HOH HOH A . E 4 HOH 29 373 373 HOH HOH A . E 4 HOH 30 374 374 HOH HOH A . E 4 HOH 31 375 375 HOH HOH A . E 4 HOH 32 376 376 HOH HOH A . E 4 HOH 33 377 377 HOH HOH A . E 4 HOH 34 378 378 HOH HOH A . E 4 HOH 35 379 379 HOH HOH A . E 4 HOH 36 380 380 HOH HOH A . E 4 HOH 37 381 381 HOH HOH A . E 4 HOH 38 382 382 HOH HOH A . E 4 HOH 39 383 383 HOH HOH A . E 4 HOH 40 384 384 HOH HOH A . E 4 HOH 41 385 385 HOH HOH A . E 4 HOH 42 386 386 HOH HOH A . E 4 HOH 43 387 387 HOH HOH A . E 4 HOH 44 388 388 HOH HOH A . E 4 HOH 45 389 389 HOH HOH A . E 4 HOH 46 390 390 HOH HOH A . E 4 HOH 47 391 391 HOH HOH A . E 4 HOH 48 392 392 HOH HOH A . E 4 HOH 49 393 393 HOH HOH A . E 4 HOH 50 394 394 HOH HOH A . E 4 HOH 51 395 395 HOH HOH A . E 4 HOH 52 396 396 HOH HOH A . E 4 HOH 53 397 397 HOH HOH A . E 4 HOH 54 398 398 HOH HOH A . E 4 HOH 55 399 399 HOH HOH A . E 4 HOH 56 400 400 HOH HOH A . E 4 HOH 57 401 401 HOH HOH A . E 4 HOH 58 402 402 HOH HOH A . E 4 HOH 59 403 403 HOH HOH A . E 4 HOH 60 404 404 HOH HOH A . E 4 HOH 61 405 405 HOH HOH A . E 4 HOH 62 406 406 HOH HOH A . E 4 HOH 63 407 407 HOH HOH A . E 4 HOH 64 408 408 HOH HOH A . E 4 HOH 65 409 409 HOH HOH A . E 4 HOH 66 410 410 HOH HOH A . E 4 HOH 67 411 411 HOH HOH A . E 4 HOH 68 412 412 HOH HOH A . E 4 HOH 69 413 413 HOH HOH A . E 4 HOH 70 414 414 HOH HOH A . E 4 HOH 71 415 415 HOH HOH A . E 4 HOH 72 416 416 HOH HOH A . E 4 HOH 73 417 417 HOH HOH A . E 4 HOH 74 418 418 HOH HOH A . E 4 HOH 75 419 419 HOH HOH A . E 4 HOH 76 420 420 HOH HOH A . E 4 HOH 77 421 421 HOH HOH A . E 4 HOH 78 422 422 HOH HOH A . E 4 HOH 79 423 423 HOH HOH A . E 4 HOH 80 424 424 HOH HOH A . E 4 HOH 81 425 425 HOH HOH A . E 4 HOH 82 426 426 HOH HOH A . E 4 HOH 83 427 427 HOH HOH A . E 4 HOH 84 428 428 HOH HOH A . E 4 HOH 85 429 429 HOH HOH A . E 4 HOH 86 430 430 HOH HOH A . E 4 HOH 87 431 431 HOH HOH A . E 4 HOH 88 432 432 HOH HOH A . E 4 HOH 89 433 433 HOH HOH A . E 4 HOH 90 434 434 HOH HOH A . E 4 HOH 91 435 435 HOH HOH A . E 4 HOH 92 436 436 HOH HOH A . E 4 HOH 93 437 437 HOH HOH A . E 4 HOH 94 438 438 HOH HOH A . E 4 HOH 95 439 439 HOH HOH A . E 4 HOH 96 440 440 HOH HOH A . E 4 HOH 97 441 441 HOH HOH A . E 4 HOH 98 442 442 HOH HOH A . E 4 HOH 99 443 443 HOH HOH A . E 4 HOH 100 444 444 HOH HOH A . E 4 HOH 101 445 445 HOH HOH A . E 4 HOH 102 446 446 HOH HOH A . E 4 HOH 103 447 447 HOH HOH A . E 4 HOH 104 448 448 HOH HOH A . E 4 HOH 105 449 449 HOH HOH A . E 4 HOH 106 450 450 HOH HOH A . E 4 HOH 107 451 451 HOH HOH A . E 4 HOH 108 452 452 HOH HOH A . E 4 HOH 109 453 453 HOH HOH A . E 4 HOH 110 454 454 HOH HOH A . E 4 HOH 111 455 455 HOH HOH A . E 4 HOH 112 456 456 HOH HOH A . E 4 HOH 113 457 457 HOH HOH A . E 4 HOH 114 458 458 HOH HOH A . E 4 HOH 115 459 459 HOH HOH A . E 4 HOH 116 460 460 HOH HOH A . E 4 HOH 117 461 461 HOH HOH A . E 4 HOH 118 462 462 HOH HOH A . E 4 HOH 119 463 463 HOH HOH A . E 4 HOH 120 464 464 HOH HOH A . E 4 HOH 121 465 465 HOH HOH A . E 4 HOH 122 466 466 HOH HOH A . E 4 HOH 123 467 467 HOH HOH A . E 4 HOH 124 468 468 HOH HOH A . E 4 HOH 125 469 469 HOH HOH A . E 4 HOH 126 470 470 HOH HOH A . E 4 HOH 127 471 471 HOH HOH A . E 4 HOH 128 472 472 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-06-30 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-10-20 4 'Structure model' 1 3 2023-09-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Non-polymer description' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' struct_ref_seq_dif 3 3 'Structure model' struct_site 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CrystalClear 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.5.0066 ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 378 ? ? O A HOH 454 ? ? 1.86 2 1 O A PHE 122 ? ? O A HOH 412 ? ? 1.93 3 1 O A VAL 168 ? ? O A HOH 400 ? ? 1.98 4 1 O A HOH 404 ? ? O A HOH 434 ? ? 2.09 5 1 O A HOH 409 ? ? O A HOH 455 ? ? 2.11 6 1 O A GLU 88 ? ? O A HOH 397 ? ? 2.14 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 NE2 A GLN 261 ? ? 1_555 O A HOH 397 ? ? 3_555 1.79 2 1 OE1 A GLN 261 ? ? 1_555 O A HOH 397 ? ? 3_555 1.85 3 1 O A HOH 431 ? ? 1_555 O A HOH 436 ? ? 3_545 2.02 4 1 CD A GLN 261 ? ? 1_555 O A HOH 397 ? ? 3_555 2.04 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 168 ? ? -69.05 90.70 2 1 ALA A 170 ? ? -113.09 -165.18 3 1 LYS A 226 ? ? -113.14 -75.35 4 1 ASN A 274 ? ? 48.02 29.36 5 1 LYS A 275 ? ? -154.30 76.14 6 1 LYS A 309 ? ? -65.15 5.01 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A VPU 341 ? OAQ ? B VPU 1 OAQ 2 1 N 1 A VPU 341 ? CAP ? B VPU 1 CAP 3 1 N 1 A VPU 341 ? OAR ? B VPU 1 OAR 4 1 N 1 A VPU 341 ? NAO ? B VPU 1 NAO 5 1 N 1 A VPU 341 ? CAS ? B VPU 1 CAS 6 1 N 1 A VPU 341 ? CAT ? B VPU 1 CAT 7 1 N 1 A VPU 341 ? CAU ? B VPU 1 CAU 8 1 N 1 A VPU 341 ? CAV ? B VPU 1 CAV 9 1 N 1 A VPU 341 ? CAW ? B VPU 1 CAW 10 1 N 1 A VPU 341 ? CAX ? B VPU 1 CAX # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 172 ? A SER 172 2 1 Y 1 A GLU 247 ? A GLU 247 3 1 Y 1 A GLY 248 ? A GLY 248 4 1 Y 1 A ALA 249 ? A ALA 249 5 1 Y 1 A ALA 250 ? A ALA 250 6 1 Y 1 A GLU 330 ? A GLU 330 7 1 Y 1 A HIS 331 ? A HIS 331 8 1 Y 1 A HIS 332 ? A HIS 332 9 1 Y 1 A HIS 333 ? A HIS 333 10 1 Y 1 A HIS 334 ? A HIS 334 11 1 Y 1 A HIS 335 ? A HIS 335 12 1 Y 1 A HIS 336 ? A HIS 336 13 1 Y 1 A HIS 337 ? A HIS 337 14 1 Y 1 A HIS 338 ? A HIS 338 15 1 Y 1 A HIS 339 ? A HIS 339 16 1 Y 1 A HIS 340 ? A HIS 340 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GOL C1 C N N 137 GOL O1 O N N 138 GOL C2 C N N 139 GOL O2 O N N 140 GOL C3 C N N 141 GOL O3 O N N 142 GOL H11 H N N 143 GOL H12 H N N 144 GOL HO1 H N N 145 GOL H2 H N N 146 GOL HO2 H N N 147 GOL H31 H N N 148 GOL H32 H N N 149 GOL HO3 H N N 150 HIS N N N N 151 HIS CA C N S 152 HIS C C N N 153 HIS O O N N 154 HIS CB C N N 155 HIS CG C Y N 156 HIS ND1 N Y N 157 HIS CD2 C Y N 158 HIS CE1 C Y N 159 HIS NE2 N Y N 160 HIS OXT O N N 161 HIS H H N N 162 HIS H2 H N N 163 HIS HA H N N 164 HIS HB2 H N N 165 HIS HB3 H N N 166 HIS HD1 H N N 167 HIS HD2 H N N 168 HIS HE1 H N N 169 HIS HE2 H N N 170 HIS HXT H N N 171 HOH O O N N 172 HOH H1 H N N 173 HOH H2 H N N 174 ILE N N N N 175 ILE CA C N S 176 ILE C C N N 177 ILE O O N N 178 ILE CB C N S 179 ILE CG1 C N N 180 ILE CG2 C N N 181 ILE CD1 C N N 182 ILE OXT O N N 183 ILE H H N N 184 ILE H2 H N N 185 ILE HA H N N 186 ILE HB H N N 187 ILE HG12 H N N 188 ILE HG13 H N N 189 ILE HG21 H N N 190 ILE HG22 H N N 191 ILE HG23 H N N 192 ILE HD11 H N N 193 ILE HD12 H N N 194 ILE HD13 H N N 195 ILE HXT H N N 196 LEU N N N N 197 LEU CA C N S 198 LEU C C N N 199 LEU O O N N 200 LEU CB C N N 201 LEU CG C N N 202 LEU CD1 C N N 203 LEU CD2 C N N 204 LEU OXT O N N 205 LEU H H N N 206 LEU H2 H N N 207 LEU HA H N N 208 LEU HB2 H N N 209 LEU HB3 H N N 210 LEU HG H N N 211 LEU HD11 H N N 212 LEU HD12 H N N 213 LEU HD13 H N N 214 LEU HD21 H N N 215 LEU HD22 H N N 216 LEU HD23 H N N 217 LEU HXT H N N 218 LYS N N N N 219 LYS CA C N S 220 LYS C C N N 221 LYS O O N N 222 LYS CB C N N 223 LYS CG C N N 224 LYS CD C N N 225 LYS CE C N N 226 LYS NZ N N N 227 LYS OXT O N N 228 LYS H H N N 229 LYS H2 H N N 230 LYS HA H N N 231 LYS HB2 H N N 232 LYS HB3 H N N 233 LYS HG2 H N N 234 LYS HG3 H N N 235 LYS HD2 H N N 236 LYS HD3 H N N 237 LYS HE2 H N N 238 LYS HE3 H N N 239 LYS HZ1 H N N 240 LYS HZ2 H N N 241 LYS HZ3 H N N 242 LYS HXT H N N 243 MET N N N N 244 MET CA C N S 245 MET C C N N 246 MET O O N N 247 MET CB C N N 248 MET CG C N N 249 MET SD S N N 250 MET CE C N N 251 MET OXT O N N 252 MET H H N N 253 MET H2 H N N 254 MET HA H N N 255 MET HB2 H N N 256 MET HB3 H N N 257 MET HG2 H N N 258 MET HG3 H N N 259 MET HE1 H N N 260 MET HE2 H N N 261 MET HE3 H N N 262 MET HXT H N N 263 PHE N N N N 264 PHE CA C N S 265 PHE C C N N 266 PHE O O N N 267 PHE CB C N N 268 PHE CG C Y N 269 PHE CD1 C Y N 270 PHE CD2 C Y N 271 PHE CE1 C Y N 272 PHE CE2 C Y N 273 PHE CZ C Y N 274 PHE OXT O N N 275 PHE H H N N 276 PHE H2 H N N 277 PHE HA H N N 278 PHE HB2 H N N 279 PHE HB3 H N N 280 PHE HD1 H N N 281 PHE HD2 H N N 282 PHE HE1 H N N 283 PHE HE2 H N N 284 PHE HZ H N N 285 PHE HXT H N N 286 PRO N N N N 287 PRO CA C N S 288 PRO C C N N 289 PRO O O N N 290 PRO CB C N N 291 PRO CG C N N 292 PRO CD C N N 293 PRO OXT O N N 294 PRO H H N N 295 PRO HA H N N 296 PRO HB2 H N N 297 PRO HB3 H N N 298 PRO HG2 H N N 299 PRO HG3 H N N 300 PRO HD2 H N N 301 PRO HD3 H N N 302 PRO HXT H N N 303 SER N N N N 304 SER CA C N S 305 SER C C N N 306 SER O O N N 307 SER CB C N N 308 SER OG O N N 309 SER OXT O N N 310 SER H H N N 311 SER H2 H N N 312 SER HA H N N 313 SER HB2 H N N 314 SER HB3 H N N 315 SER HG H N N 316 SER HXT H N N 317 THR N N N N 318 THR CA C N S 319 THR C C N N 320 THR O O N N 321 THR CB C N R 322 THR OG1 O N N 323 THR CG2 C N N 324 THR OXT O N N 325 THR H H N N 326 THR H2 H N N 327 THR HA H N N 328 THR HB H N N 329 THR HG1 H N N 330 THR HG21 H N N 331 THR HG22 H N N 332 THR HG23 H N N 333 THR HXT H N N 334 TRP N N N N 335 TRP CA C N S 336 TRP C C N N 337 TRP O O N N 338 TRP CB C N N 339 TRP CG C Y N 340 TRP CD1 C Y N 341 TRP CD2 C Y N 342 TRP NE1 N Y N 343 TRP CE2 C Y N 344 TRP CE3 C Y N 345 TRP CZ2 C Y N 346 TRP CZ3 C Y N 347 TRP CH2 C Y N 348 TRP OXT O N N 349 TRP H H N N 350 TRP H2 H N N 351 TRP HA H N N 352 TRP HB2 H N N 353 TRP HB3 H N N 354 TRP HD1 H N N 355 TRP HE1 H N N 356 TRP HE3 H N N 357 TRP HZ2 H N N 358 TRP HZ3 H N N 359 TRP HH2 H N N 360 TRP HXT H N N 361 TYR N N N N 362 TYR CA C N S 363 TYR C C N N 364 TYR O O N N 365 TYR CB C N N 366 TYR CG C Y N 367 TYR CD1 C Y N 368 TYR CD2 C Y N 369 TYR CE1 C Y N 370 TYR CE2 C Y N 371 TYR CZ C Y N 372 TYR OH O N N 373 TYR OXT O N N 374 TYR H H N N 375 TYR H2 H N N 376 TYR HA H N N 377 TYR HB2 H N N 378 TYR HB3 H N N 379 TYR HD1 H N N 380 TYR HD2 H N N 381 TYR HE1 H N N 382 TYR HE2 H N N 383 TYR HH H N N 384 TYR HXT H N N 385 VAL N N N N 386 VAL CA C N S 387 VAL C C N N 388 VAL O O N N 389 VAL CB C N N 390 VAL CG1 C N N 391 VAL CG2 C N N 392 VAL OXT O N N 393 VAL H H N N 394 VAL H2 H N N 395 VAL HA H N N 396 VAL HB H N N 397 VAL HG11 H N N 398 VAL HG12 H N N 399 VAL HG13 H N N 400 VAL HG21 H N N 401 VAL HG22 H N N 402 VAL HG23 H N N 403 VAL HXT H N N 404 VPU C3 C N N 405 VPU C2 C N N 406 VPU C1 C N N 407 VPU CAH C N N 408 VPU CAG C N N 409 VPU OAN O N N 410 VPU NAI N N N 411 VPU CAB C N R 412 VPU CAC C N R 413 VPU OAJ O N N 414 VPU CAD C N S 415 VPU OAK O N N 416 VPU CAE C N R 417 VPU CAF C N N 418 VPU OAM O N N 419 VPU OAL O N N 420 VPU CAA C N N 421 VPU NAY N N N 422 VPU OAQ O N N 423 VPU CAP C N N 424 VPU OAR O N N 425 VPU NAO N N N 426 VPU CAS C Y N 427 VPU CAT C Y N 428 VPU CAU C Y N 429 VPU CAV C Y N 430 VPU CAW C Y N 431 VPU CAX C Y N 432 VPU H3 H N N 433 VPU H3A H N N 434 VPU H3B H N N 435 VPU H2 H N N 436 VPU H2A H N N 437 VPU H1 H N N 438 VPU H1A H N N 439 VPU HAH H N N 440 VPU HAHA H N N 441 VPU HNAI H N N 442 VPU HAB H N N 443 VPU HAC H N N 444 VPU HOAJ H N N 445 VPU HAD H N N 446 VPU HOAK H N N 447 VPU HAE H N N 448 VPU HAF H N N 449 VPU HAFA H N N 450 VPU HOAM H N N 451 VPU HNAO H N N 452 VPU HAT H N N 453 VPU HAU H N N 454 VPU HAV H N N 455 VPU HAW H N N 456 VPU HAX H N N 457 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GOL C1 O1 sing N N 129 GOL C1 C2 sing N N 130 GOL C1 H11 sing N N 131 GOL C1 H12 sing N N 132 GOL O1 HO1 sing N N 133 GOL C2 O2 sing N N 134 GOL C2 C3 sing N N 135 GOL C2 H2 sing N N 136 GOL O2 HO2 sing N N 137 GOL C3 O3 sing N N 138 GOL C3 H31 sing N N 139 GOL C3 H32 sing N N 140 GOL O3 HO3 sing N N 141 HIS N CA sing N N 142 HIS N H sing N N 143 HIS N H2 sing N N 144 HIS CA C sing N N 145 HIS CA CB sing N N 146 HIS CA HA sing N N 147 HIS C O doub N N 148 HIS C OXT sing N N 149 HIS CB CG sing N N 150 HIS CB HB2 sing N N 151 HIS CB HB3 sing N N 152 HIS CG ND1 sing Y N 153 HIS CG CD2 doub Y N 154 HIS ND1 CE1 doub Y N 155 HIS ND1 HD1 sing N N 156 HIS CD2 NE2 sing Y N 157 HIS CD2 HD2 sing N N 158 HIS CE1 NE2 sing Y N 159 HIS CE1 HE1 sing N N 160 HIS NE2 HE2 sing N N 161 HIS OXT HXT sing N N 162 HOH O H1 sing N N 163 HOH O H2 sing N N 164 ILE N CA sing N N 165 ILE N H sing N N 166 ILE N H2 sing N N 167 ILE CA C sing N N 168 ILE CA CB sing N N 169 ILE CA HA sing N N 170 ILE C O doub N N 171 ILE C OXT sing N N 172 ILE CB CG1 sing N N 173 ILE CB CG2 sing N N 174 ILE CB HB sing N N 175 ILE CG1 CD1 sing N N 176 ILE CG1 HG12 sing N N 177 ILE CG1 HG13 sing N N 178 ILE CG2 HG21 sing N N 179 ILE CG2 HG22 sing N N 180 ILE CG2 HG23 sing N N 181 ILE CD1 HD11 sing N N 182 ILE CD1 HD12 sing N N 183 ILE CD1 HD13 sing N N 184 ILE OXT HXT sing N N 185 LEU N CA sing N N 186 LEU N H sing N N 187 LEU N H2 sing N N 188 LEU CA C sing N N 189 LEU CA CB sing N N 190 LEU CA HA sing N N 191 LEU C O doub N N 192 LEU C OXT sing N N 193 LEU CB CG sing N N 194 LEU CB HB2 sing N N 195 LEU CB HB3 sing N N 196 LEU CG CD1 sing N N 197 LEU CG CD2 sing N N 198 LEU CG HG sing N N 199 LEU CD1 HD11 sing N N 200 LEU CD1 HD12 sing N N 201 LEU CD1 HD13 sing N N 202 LEU CD2 HD21 sing N N 203 LEU CD2 HD22 sing N N 204 LEU CD2 HD23 sing N N 205 LEU OXT HXT sing N N 206 LYS N CA sing N N 207 LYS N H sing N N 208 LYS N H2 sing N N 209 LYS CA C sing N N 210 LYS CA CB sing N N 211 LYS CA HA sing N N 212 LYS C O doub N N 213 LYS C OXT sing N N 214 LYS CB CG sing N N 215 LYS CB HB2 sing N N 216 LYS CB HB3 sing N N 217 LYS CG CD sing N N 218 LYS CG HG2 sing N N 219 LYS CG HG3 sing N N 220 LYS CD CE sing N N 221 LYS CD HD2 sing N N 222 LYS CD HD3 sing N N 223 LYS CE NZ sing N N 224 LYS CE HE2 sing N N 225 LYS CE HE3 sing N N 226 LYS NZ HZ1 sing N N 227 LYS NZ HZ2 sing N N 228 LYS NZ HZ3 sing N N 229 LYS OXT HXT sing N N 230 MET N CA sing N N 231 MET N H sing N N 232 MET N H2 sing N N 233 MET CA C sing N N 234 MET CA CB sing N N 235 MET CA HA sing N N 236 MET C O doub N N 237 MET C OXT sing N N 238 MET CB CG sing N N 239 MET CB HB2 sing N N 240 MET CB HB3 sing N N 241 MET CG SD sing N N 242 MET CG HG2 sing N N 243 MET CG HG3 sing N N 244 MET SD CE sing N N 245 MET CE HE1 sing N N 246 MET CE HE2 sing N N 247 MET CE HE3 sing N N 248 MET OXT HXT sing N N 249 PHE N CA sing N N 250 PHE N H sing N N 251 PHE N H2 sing N N 252 PHE CA C sing N N 253 PHE CA CB sing N N 254 PHE CA HA sing N N 255 PHE C O doub N N 256 PHE C OXT sing N N 257 PHE CB CG sing N N 258 PHE CB HB2 sing N N 259 PHE CB HB3 sing N N 260 PHE CG CD1 doub Y N 261 PHE CG CD2 sing Y N 262 PHE CD1 CE1 sing Y N 263 PHE CD1 HD1 sing N N 264 PHE CD2 CE2 doub Y N 265 PHE CD2 HD2 sing N N 266 PHE CE1 CZ doub Y N 267 PHE CE1 HE1 sing N N 268 PHE CE2 CZ sing Y N 269 PHE CE2 HE2 sing N N 270 PHE CZ HZ sing N N 271 PHE OXT HXT sing N N 272 PRO N CA sing N N 273 PRO N CD sing N N 274 PRO N H sing N N 275 PRO CA C sing N N 276 PRO CA CB sing N N 277 PRO CA HA sing N N 278 PRO C O doub N N 279 PRO C OXT sing N N 280 PRO CB CG sing N N 281 PRO CB HB2 sing N N 282 PRO CB HB3 sing N N 283 PRO CG CD sing N N 284 PRO CG HG2 sing N N 285 PRO CG HG3 sing N N 286 PRO CD HD2 sing N N 287 PRO CD HD3 sing N N 288 PRO OXT HXT sing N N 289 SER N CA sing N N 290 SER N H sing N N 291 SER N H2 sing N N 292 SER CA C sing N N 293 SER CA CB sing N N 294 SER CA HA sing N N 295 SER C O doub N N 296 SER C OXT sing N N 297 SER CB OG sing N N 298 SER CB HB2 sing N N 299 SER CB HB3 sing N N 300 SER OG HG sing N N 301 SER OXT HXT sing N N 302 THR N CA sing N N 303 THR N H sing N N 304 THR N H2 sing N N 305 THR CA C sing N N 306 THR CA CB sing N N 307 THR CA HA sing N N 308 THR C O doub N N 309 THR C OXT sing N N 310 THR CB OG1 sing N N 311 THR CB CG2 sing N N 312 THR CB HB sing N N 313 THR OG1 HG1 sing N N 314 THR CG2 HG21 sing N N 315 THR CG2 HG22 sing N N 316 THR CG2 HG23 sing N N 317 THR OXT HXT sing N N 318 TRP N CA sing N N 319 TRP N H sing N N 320 TRP N H2 sing N N 321 TRP CA C sing N N 322 TRP CA CB sing N N 323 TRP CA HA sing N N 324 TRP C O doub N N 325 TRP C OXT sing N N 326 TRP CB CG sing N N 327 TRP CB HB2 sing N N 328 TRP CB HB3 sing N N 329 TRP CG CD1 doub Y N 330 TRP CG CD2 sing Y N 331 TRP CD1 NE1 sing Y N 332 TRP CD1 HD1 sing N N 333 TRP CD2 CE2 doub Y N 334 TRP CD2 CE3 sing Y N 335 TRP NE1 CE2 sing Y N 336 TRP NE1 HE1 sing N N 337 TRP CE2 CZ2 sing Y N 338 TRP CE3 CZ3 doub Y N 339 TRP CE3 HE3 sing N N 340 TRP CZ2 CH2 doub Y N 341 TRP CZ2 HZ2 sing N N 342 TRP CZ3 CH2 sing Y N 343 TRP CZ3 HZ3 sing N N 344 TRP CH2 HH2 sing N N 345 TRP OXT HXT sing N N 346 TYR N CA sing N N 347 TYR N H sing N N 348 TYR N H2 sing N N 349 TYR CA C sing N N 350 TYR CA CB sing N N 351 TYR CA HA sing N N 352 TYR C O doub N N 353 TYR C OXT sing N N 354 TYR CB CG sing N N 355 TYR CB HB2 sing N N 356 TYR CB HB3 sing N N 357 TYR CG CD1 doub Y N 358 TYR CG CD2 sing Y N 359 TYR CD1 CE1 sing Y N 360 TYR CD1 HD1 sing N N 361 TYR CD2 CE2 doub Y N 362 TYR CD2 HD2 sing N N 363 TYR CE1 CZ doub Y N 364 TYR CE1 HE1 sing N N 365 TYR CE2 CZ sing Y N 366 TYR CE2 HE2 sing N N 367 TYR CZ OH sing N N 368 TYR OH HH sing N N 369 TYR OXT HXT sing N N 370 VAL N CA sing N N 371 VAL N H sing N N 372 VAL N H2 sing N N 373 VAL CA C sing N N 374 VAL CA CB sing N N 375 VAL CA HA sing N N 376 VAL C O doub N N 377 VAL C OXT sing N N 378 VAL CB CG1 sing N N 379 VAL CB CG2 sing N N 380 VAL CB HB sing N N 381 VAL CG1 HG11 sing N N 382 VAL CG1 HG12 sing N N 383 VAL CG1 HG13 sing N N 384 VAL CG2 HG21 sing N N 385 VAL CG2 HG22 sing N N 386 VAL CG2 HG23 sing N N 387 VAL OXT HXT sing N N 388 VPU C3 C2 sing N N 389 VPU C2 C1 sing N N 390 VPU C1 CAH sing N N 391 VPU CAH CAG sing N N 392 VPU CAG OAN doub N N 393 VPU CAG NAI sing N N 394 VPU NAI CAB sing N N 395 VPU CAB CAC sing N N 396 VPU CAB CAA sing N N 397 VPU CAC OAJ sing N N 398 VPU CAC CAD sing N N 399 VPU CAD OAK sing N N 400 VPU CAD CAE sing N N 401 VPU CAE CAF sing N N 402 VPU CAE OAL sing N N 403 VPU CAF OAM sing N N 404 VPU OAL CAA sing N N 405 VPU CAA NAY doub N N 406 VPU NAY OAQ sing N N 407 VPU OAQ CAP sing N N 408 VPU CAP OAR doub N N 409 VPU CAP NAO sing N N 410 VPU NAO CAS sing N N 411 VPU CAS CAT doub Y N 412 VPU CAS CAX sing Y N 413 VPU CAT CAU sing Y N 414 VPU CAU CAV doub Y N 415 VPU CAV CAW sing Y N 416 VPU CAW CAX doub Y N 417 VPU C3 H3 sing N N 418 VPU C3 H3A sing N N 419 VPU C3 H3B sing N N 420 VPU C2 H2 sing N N 421 VPU C2 H2A sing N N 422 VPU C1 H1 sing N N 423 VPU C1 H1A sing N N 424 VPU CAH HAH sing N Z 425 VPU CAH HAHA sing N N 426 VPU NAI HNAI sing N N 427 VPU CAB HAB sing N N 428 VPU CAC HAC sing N N 429 VPU OAJ HOAJ sing N N 430 VPU CAD HAD sing N N 431 VPU OAK HOAK sing N N 432 VPU CAE HAE sing N N 433 VPU CAF HAF sing N N 434 VPU CAF HAFA sing N N 435 VPU OAM HOAM sing N N 436 VPU NAO HNAO sing N N 437 VPU CAT HAT sing N N 438 VPU CAU HAU sing N N 439 VPU CAV HAV sing N N 440 VPU CAW HAW sing N N 441 VPU CAX HAX sing N N 442 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '[[(3R,4R,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-(pentanoylamino)oxan-2-ylidene]amino] N-phenylcarbamate' VPU 3 GLYCEROL GOL 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2OXN _pdbx_initial_refinement_model.details ? #